data_KU9
#
_chem_comp.id KU9
_chem_comp.name
2-[(2S)-1-{[(2-chlorophenyl)sulfanyl]acetyl}pyrrolidin-2-yl]-N-(2,3-dihydro-1H-inden-2-yl)-5-hydroxy-6-oxo-1,6-dihydropyrimidine-4-carboxamide
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C26 H25 Cl N4 O4 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2017-06-27
_chem_comp.pdbx_modified_date 2017-12-29
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 525.019
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code KU9
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5WAP
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
KU9 C1 C1 C 0 1 N N N N N N -60.919 356.279 694.333 -5.512 0.982 -0.501 C1 KU9 1
KU9 C10 C2 C 0 1 Y N N N N N -58.350 358.010 686.244 5.064 3.018 1.089 C10 KU9 2
KU9 C11 C3 C 0 1 Y N N N N N -57.636 358.709 687.202 3.990 2.438 1.736 C11 KU9 3
KU9 C12 C4 C 0 1 Y N N N N N -58.331 359.486 688.117 2.728 2.483 1.168 C12 KU9 4
KU9 C13 C5 C 0 1 N N N N N N -57.817 360.338 689.248 1.408 1.933 1.666 C13 KU9 5
KU9 C14 C6 C 0 1 N N N N N N -58.931 355.789 693.084 -3.963 -0.759 -0.245 C14 KU9 6
KU9 C15 C7 C 0 1 N N S N N N -57.772 354.876 692.746 -3.680 -2.239 -0.244 C15 KU9 7
KU9 C16 C8 C 0 1 N N N N N N -56.784 355.374 690.519 -1.189 -2.045 -0.458 C16 KU9 8
KU9 C17 C9 C 0 1 N N N N N N -57.379 354.116 689.919 0.177 -2.370 0.090 C17 KU9 9
KU9 C18 C10 C 0 1 Y N N N N N -60.165 353.878 690.201 2.950 -2.123 -0.196 C18 KU9 10
KU9 C19 C11 C 0 1 Y N N N N N -60.088 352.616 690.790 2.916 -2.883 0.966 C19 KU9 11
KU9 C2 C12 C 0 1 N N N N N N -60.976 357.492 693.650 -4.420 1.924 -0.222 C2 KU9 12
KU9 C20 C13 C 0 1 Y N N N N N -61.046 352.222 691.706 4.096 -3.260 1.578 C20 KU9 13
KU9 C21 C14 C 0 1 Y N N N N N -62.076 353.072 692.040 5.310 -2.881 1.035 C21 KU9 14
KU9 C22 C15 C 0 1 Y N N N N N -62.165 354.323 691.468 5.349 -2.124 -0.122 C22 KU9 15
KU9 C23 C16 C 0 1 Y N N N N N -61.211 354.720 690.552 4.172 -1.744 -0.739 C23 KU9 16
KU9 C24 C17 C 0 1 N N N N N N -55.784 356.265 692.622 -2.309 -3.284 1.417 C24 KU9 17
KU9 C25 C18 C 0 1 N N N N N N -56.166 355.992 694.064 -3.669 -4.026 1.390 C25 KU9 18
KU9 C26 C19 C 0 1 N N N N N N -56.866 354.644 693.963 -4.599 -2.949 0.772 C26 KU9 19
KU9 C3 C20 C 0 1 N N N N N N -60.021 357.795 692.725 -3.162 1.397 0.026 C3 KU9 20
KU9 C4 C21 C 0 1 N N N N N N -60.058 359.098 691.977 -2.021 2.295 0.315 C4 KU9 21
KU9 C5 C22 C 0 1 N N N N N N -59.044 360.429 690.177 0.329 2.666 0.841 C5 KU9 22
KU9 C6 C23 C 0 1 N N N N N N -60.210 360.466 689.168 1.087 3.022 -0.455 C6 KU9 23
KU9 C7 C24 C 0 1 Y N N N N N -59.717 359.556 688.075 2.543 3.109 -0.051 C7 KU9 24
KU9 C8 C25 C 0 1 Y N N N N N -60.427 358.860 687.107 3.621 3.688 -0.698 C8 KU9 25
KU9 C9 C26 C 0 1 Y N N N N N -59.729 358.084 686.198 4.879 3.648 -0.127 C9 KU9 26
KU9 N1 N1 N 0 1 N N N N N N -59.122 359.253 691.024 -0.801 1.777 0.555 N1 KU9 27
KU9 N2 N2 N 0 1 N N N N N N -59.009 356.959 692.445 -2.987 0.064 0.004 N2 KU9 28
KU9 N3 N3 N 0 1 N N N N N N -56.794 355.521 691.854 -2.293 -2.483 0.179 N3 KU9 29
KU9 N4 N4 N 0 1 N N N N N N -59.868 355.442 694.020 -5.227 -0.338 -0.493 N4 KU9 30
KU9 O1 O1 O 0 1 N N N N N N -61.750 355.928 695.184 -6.641 1.380 -0.728 O1 KU9 31
KU9 O2 O2 O 0 1 N N N N N N -62.003 358.298 693.957 -4.635 3.263 -0.208 O2 KU9 32
KU9 O3 O3 O 0 1 N N N N N N -60.889 359.967 692.235 -2.185 3.499 0.334 O3 KU9 33
KU9 O4 O4 O 0 1 N N N N N N -56.314 356.245 689.793 -1.294 -1.390 -1.474 O4 KU9 34
KU9 S1 S1 S 0 1 N N N N N N -58.939 354.381 689.033 1.447 -1.646 -0.984 S1 KU9 35
KU9 CL1 CL1 CL 0 0 N N N N N N -61.344 356.295 689.845 4.221 -0.794 -2.192 CL1 KU9 36
KU9 H1 H1 H 0 1 N N N N N N -57.824 357.400 685.525 6.047 2.981 1.535 H1 KU9 37
KU9 H2 H2 H 0 1 N N N N N N -56.558 358.651 687.236 4.135 1.949 2.688 H2 KU9 38
KU9 H3 H3 H 0 1 N N N N N N -56.968 359.856 689.755 1.355 0.859 1.489 H3 KU9 39
KU9 H4 H4 H 0 1 N N N N N N -57.514 361.333 688.891 1.285 2.149 2.727 H4 KU9 40
KU9 H5 H5 H 0 1 N N N N N N -58.128 353.919 692.336 -3.843 -2.649 -1.241 H5 KU9 41
KU9 H6 H6 H 0 1 N N N N N N -57.562 353.399 690.733 0.272 -1.958 1.095 H6 KU9 42
KU9 H7 H7 H 0 1 N N N N N N -56.649 353.692 689.214 0.306 -3.452 0.127 H7 KU9 43
KU9 H8 H8 H 0 1 N N N N N N -59.281 351.947 690.531 1.969 -3.179 1.391 H8 KU9 44
KU9 H9 H9 H 0 1 N N N N N N -60.986 351.244 692.161 4.070 -3.851 2.481 H9 KU9 45
KU9 H10 H10 H 0 1 N N N N N N -62.820 352.756 692.756 6.231 -3.177 1.516 H10 KU9 46
KU9 H11 H11 H 0 1 N N N N N N -62.974 354.987 691.734 6.299 -1.829 -0.542 H11 KU9 47
KU9 H12 H12 H 0 1 N N N N N N -54.772 355.892 692.406 -2.248 -2.634 2.290 H12 KU9 48
KU9 H13 H13 H 0 1 N N N N N N -55.834 357.341 692.399 -1.487 -3.999 1.419 H13 KU9 49
KU9 H14 H14 H 0 1 N N N N N N -55.276 355.932 694.708 -3.619 -4.910 0.756 H14 KU9 50
KU9 H15 H15 H 0 1 N N N N N N -56.846 356.766 694.450 -3.990 -4.288 2.398 H15 KU9 51
KU9 H16 H16 H 0 1 N N N N N N -57.452 354.424 694.867 -4.942 -2.251 1.536 H16 KU9 52
KU9 H17 H17 H 0 1 N N N N N N -56.149 353.829 693.784 -5.445 -3.415 0.266 H17 KU9 53
KU9 H18 H18 H 0 1 N N N N N N -59.014 361.357 690.766 -0.009 3.565 1.356 H18 KU9 54
KU9 H19 H19 H 0 1 N N N N N N -60.379 361.486 688.792 0.948 2.241 -1.202 H19 KU9 55
KU9 H20 H20 H 0 1 N N N N N N -61.138 360.083 689.617 0.743 3.981 -0.843 H20 KU9 56
KU9 H21 H21 H 0 1 N N N N N N -61.504 358.923 687.064 3.478 4.177 -1.650 H21 KU9 57
KU9 H22 H22 H 0 1 N N N N N N -60.268 357.530 685.444 5.717 4.102 -0.634 H22 KU9 58
KU9 H23 H23 H 0 1 N N N N N N -58.449 358.525 690.893 -0.670 0.816 0.540 H23 KU9 59
KU9 H24 H24 H 0 1 N N N N N N -59.789 354.562 694.488 -5.926 -0.986 -0.674 H24 KU9 60
KU9 H25 H25 H 0 1 N N N N N N -61.931 359.106 693.463 -5.549 3.516 -0.395 H25 KU9 61
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
KU9 C9 C10 DOUB Y N 1
KU9 C9 C8 SING Y N 2
KU9 C10 C11 SING Y N 3
KU9 C8 C7 DOUB Y N 4
KU9 C11 C12 DOUB Y N 5
KU9 C7 C12 SING Y N 6
KU9 C7 C6 SING N N 7
KU9 C12 C13 SING N N 8
KU9 S1 C17 SING N N 9
KU9 S1 C18 SING N N 10
KU9 C6 C5 SING N N 11
KU9 C13 C5 SING N N 12
KU9 O4 C16 DOUB N N 13
KU9 CL1 C23 SING N N 14
KU9 C17 C16 SING N N 15
KU9 C5 N1 SING N N 16
KU9 C18 C23 DOUB Y N 17
KU9 C18 C19 SING Y N 18
KU9 C16 N3 SING N N 19
KU9 C23 C22 SING Y N 20
KU9 C19 C20 DOUB Y N 21
KU9 N1 C4 SING N N 22
KU9 C22 C21 DOUB Y N 23
KU9 C20 C21 SING Y N 24
KU9 N3 C24 SING N N 25
KU9 N3 C15 SING N N 26
KU9 C4 O3 DOUB N N 27
KU9 C4 C3 SING N N 28
KU9 N2 C3 SING N N 29
KU9 N2 C14 DOUB N N 30
KU9 C24 C25 SING N N 31
KU9 C3 C2 DOUB N N 32
KU9 C15 C14 SING N N 33
KU9 C15 C26 SING N N 34
KU9 C14 N4 SING N N 35
KU9 C2 O2 SING N N 36
KU9 C2 C1 SING N N 37
KU9 C26 C25 SING N N 38
KU9 N4 C1 SING N N 39
KU9 C1 O1 DOUB N N 40
KU9 C10 H1 SING N N 41
KU9 C11 H2 SING N N 42
KU9 C13 H3 SING N N 43
KU9 C13 H4 SING N N 44
KU9 C15 H5 SING N N 45
KU9 C17 H6 SING N N 46
KU9 C17 H7 SING N N 47
KU9 C19 H8 SING N N 48
KU9 C20 H9 SING N N 49
KU9 C21 H10 SING N N 50
KU9 C22 H11 SING N N 51
KU9 C24 H12 SING N N 52
KU9 C24 H13 SING N N 53
KU9 C25 H14 SING N N 54
KU9 C25 H15 SING N N 55
KU9 C26 H16 SING N N 56
KU9 C26 H17 SING N N 57
KU9 C5 H18 SING N N 58
KU9 C6 H19 SING N N 59
KU9 C6 H20 SING N N 60
KU9 C8 H21 SING N N 61
KU9 C9 H22 SING N N 62
KU9 N1 H23 SING N N 63
KU9 N4 H24 SING N N 64
KU9 O2 H25 SING N N 65
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
KU9 SMILES ACDLabs 12.01 C3(=O)C(O)=C(C(=O)NC2Cc1ccccc1C2)N=C(N3)C4CCCN4C(CSc5c(cccc5)Cl)=O
KU9 InChI InChI 1.03 InChI=1S/C26H25ClN4O4S/c27-18-8-3-4-10-20(18)36-14-21(32)31-11-5-9-19(31)24-29-22(23(33)26(35)30-24)25(34)28-17-12-15-6-1-2-7-16(15)13-17/h1-4,6-8,10,17,19,33H,5,9,11-14H2,(H,28,34)(H,29,30,35)/t19-/m0/s1
KU9 InChIKey InChI 1.03 UWHPAPZFSVMNKS-IBGZPJMESA-N
KU9 SMILES_CANONICAL CACTVS 3.385 OC1=C(N=C(NC1=O)[C@@H]2CCCN2C(=O)CSc3ccccc3Cl)C(=O)NC4Cc5ccccc5C4
KU9 SMILES CACTVS 3.385 OC1=C(N=C(NC1=O)[CH]2CCCN2C(=O)CSc3ccccc3Cl)C(=O)NC4Cc5ccccc5C4
KU9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 c1ccc2c(c1)CC(C2)NC(=O)C3=C(C(=O)NC(=N3)[C@@H]4CCCN4C(=O)CSc5ccccc5Cl)O
KU9 SMILES "OpenEye OEToolkits" 2.0.6 c1ccc2c(c1)CC(C2)NC(=O)C3=C(C(=O)NC(=N3)C4CCCN4C(=O)CSc5ccccc5Cl)O
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
KU9 "SYSTEMATIC NAME" ACDLabs 12.01 2-[(2S)-1-{[(2-chlorophenyl)sulfanyl]acetyl}pyrrolidin-2-yl]-N-(2,3-dihydro-1H-inden-2-yl)-5-hydroxy-6-oxo-1,6-dihydropyrimidine-4-carboxamide
KU9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 2-[(2~{S})-1-[2-(2-chlorophenyl)sulfanylethanoyl]pyrrolidin-2-yl]-~{N}-(2,3-dihydro-1~{H}-inden-2-yl)-5-oxidanyl-6-oxidanylidene-1~{H}-pyrimidine-4-carboxamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
KU9 'Create component' 2017-06-27 RCSB
KU9 'Initial release' 2018-01-03 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
KU9 C1 C 13.893 -5.148 1
KU9 C10 C 3.000 -1.800 2
KU9 C11 C 4.299 -1.050 3
KU9 C12 C 5.598 -1.800 4
KU9 C13 C 7.018 -1.343 5
KU9 C14 C 13.893 -2.550 6
KU9 C15 C 14.643 -1.251 7
KU9 C16 C 12.566 0.431 8
KU9 C17 C 12.102 1.858 9
KU9 C18 C 12.642 4.399 10
KU9 C19 C 11.175 4.711 11
KU9 C2 C 12.393 -5.148 12
KU9 C20 C 10.711 6.138 13
KU9 C21 C 11.715 7.252 14
KU9 C22 C 13.182 6.941 15
KU9 C23 C 13.646 5.514 16
KU9 C24 C 15.147 1.123 17
KU9 C25 C 16.446 0.373 18
KU9 C26 C 16.135 -1.094 19
KU9 C3 C 11.643 -3.849 20
KU9 C4 C 10.143 -3.849 21
KU9 C5 C 7.893 -2.550 22
KU9 C6 C 7.018 -3.757 23
KU9 C7 C 5.598 -3.300 24
KU9 C8 C 4.299 -4.050 25
KU9 C9 C 3.000 -3.300 26
KU9 N1 N 9.393 -2.550 27
KU9 N2 N 12.393 -2.550 28
KU9 N3 N 14.033 0.119 29
KU9 N4 N 14.643 -3.849 30
KU9 O1 O 14.643 -6.447 31
KU9 O2 O 11.643 -6.447 32
KU9 O3 O 9.393 -5.148 33
KU9 O4 O 11.562 -0.683 34
KU9 S1 S 13.106 2.973 35
KU9 CL1 Cl 15.113 5.202 36
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
KU9 C9 C10 DOUBLE NONE 1
KU9 C9 C8 SINGLE NONE 2
KU9 C10 C11 SINGLE NONE 3
KU9 C8 C7 DOUBLE NONE 4
KU9 C11 C12 DOUBLE NONE 5
KU9 C7 C12 SINGLE NONE 6
KU9 C7 C6 SINGLE NONE 7
KU9 C12 C13 SINGLE NONE 8
KU9 S1 C17 SINGLE NONE 9
KU9 S1 C18 SINGLE NONE 10
KU9 C6 C5 SINGLE NONE 11
KU9 C13 C5 SINGLE NONE 12
KU9 O4 C16 DOUBLE NONE 13
KU9 CL1 C23 SINGLE NONE 14
KU9 C17 C16 SINGLE NONE 15
KU9 C5 N1 SINGLE NONE 16
KU9 C18 C23 SINGLE NONE 17
KU9 C18 C19 DOUBLE NONE 18
KU9 C16 N3 SINGLE NONE 19
KU9 C23 C22 DOUBLE NONE 20
KU9 C19 C20 SINGLE NONE 21
KU9 N1 C4 SINGLE NONE 22
KU9 C22 C21 SINGLE NONE 23
KU9 C20 C21 DOUBLE NONE 24
KU9 N3 C24 SINGLE NONE 25
KU9 N3 C15 SINGLE NONE 26
KU9 C4 O3 DOUBLE NONE 27
KU9 C4 C3 SINGLE NONE 28
KU9 N2 C3 SINGLE NONE 29
KU9 N2 C14 DOUBLE NONE 30
KU9 C24 C25 SINGLE NONE 31
KU9 C3 C2 DOUBLE NONE 32
KU9 C15 C14 SINGLE BEGINWEDGE 33
KU9 C15 C26 SINGLE NONE 34
KU9 C14 N4 SINGLE NONE 35
KU9 C2 O2 SINGLE NONE 36
KU9 C2 C1 SINGLE NONE 37
KU9 C26 C25 SINGLE NONE 38
KU9 N4 C1 SINGLE NONE 39
KU9 C1 O1 DOUBLE NONE 40
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
KU9 MurckoScaffold S1 scaffold 'O=C(NC1Cc2ccccc2C1)c1cc(=O)[nH]c([C@@H]2CCCN2C(=O)CSc2ccccc2)n1' InChI=1S/C26H26N4O3S/c31-23-15-21(26(33)27-19-13-17-7-4-5-8-18(17)14-19)28-25(29-23)22-11-6-12-30(22)24(32)16-34-20-9-2-1-3-10-20/h1-5,7-10,15,19,22H,6,11-14,16H2,(H,27,33)(H,28,29,31)/t22-/m0/s1 YCIKMPFDNQHFGH-QFIPXVFZSA-N
KU9 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
KU9 phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
KU9 pyrimidine F3 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
KU9 Z52314092 F4 fragment CC(=O)NCCc1ccccc1C InChI=1S/C11H15NO/c1-9-5-3-4-6-11(9)7-8-12-10(2)13/h3-6H,7-8H2,1-2H3,(H,12,13) OAMCTZZCYXDSLI-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
KU9 C1 S1 1
KU9 C10 S1 1
KU9 C11 S1 1
KU9 C12 S1 1
KU9 C13 S1 1
KU9 C14 S1 1
KU9 C15 S1 1
KU9 C16 S1 1
KU9 C17 S1 1
KU9 C18 S1 1
KU9 C19 S1 1
KU9 C2 S1 1
KU9 C20 S1 1
KU9 C21 S1 1
KU9 C22 S1 1
KU9 C23 S1 1
KU9 C24 S1 1
KU9 C25 S1 1
KU9 C26 S1 1
KU9 C3 S1 1
KU9 C4 S1 1
KU9 C5 S1 1
KU9 C6 S1 1
KU9 C7 S1 1
KU9 C8 S1 1
KU9 C9 S1 1
KU9 N1 S1 1
KU9 N2 S1 1
KU9 N3 S1 1
KU9 N4 S1 1
KU9 O1 S1 1
KU9 O3 S1 1
KU9 O4 S1 1
KU9 S1 S1 1
KU9 N1 F1 1
KU9 C4 F1 1
KU9 O3 F1 1
KU9 C3 F1 1
KU9 N3 F1 2
KU9 C16 F1 2
KU9 O4 F1 2
KU9 C17 F1 2
KU9 C10 F2 1
KU9 C9 F2 1
KU9 C8 F2 1
KU9 C7 F2 1
KU9 C12 F2 1
KU9 C11 F2 1
KU9 C18 F2 2
KU9 C23 F2 2
KU9 C22 F2 2
KU9 C21 F2 2
KU9 C20 F2 2
KU9 C19 F2 2
KU9 C2 F3 1
KU9 C3 F3 1
KU9 N2 F3 1
KU9 C14 F3 1
KU9 N4 F3 1
KU9 C1 F3 1
KU9 C3 F4 1
KU9 C4 F4 1
KU9 O3 F4 1
KU9 N1 F4 1
KU9 C5 F4 1
KU9 C6 F4 1
KU9 C7 F4 1
KU9 C8 F4 1
KU9 C9 F4 1
KU9 C10 F4 1
KU9 C11 F4 1
KU9 C12 F4 1
KU9 C13 F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id KU9
_pdbe_chem_comp_rdkit_properties.exactmw 524.129
_pdbe_chem_comp_rdkit_properties.amw 525.030
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 8
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 7
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 6
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 36
_pdbe_chem_comp_rdkit_properties.NumAtoms 61
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 10
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.308
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 251.965
_pdbe_chem_comp_rdkit_properties.tpsa 115.390
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.593
_pdbe_chem_comp_rdkit_properties.CrippenMR 136.495
_pdbe_chem_comp_rdkit_properties.chi0v 18.780
_pdbe_chem_comp_rdkit_properties.chi1v 10.621
_pdbe_chem_comp_rdkit_properties.chi2v 5.445
_pdbe_chem_comp_rdkit_properties.chi3v 5.445
_pdbe_chem_comp_rdkit_properties.chi4v 3.452
_pdbe_chem_comp_rdkit_properties.chi0n 42.208
_pdbe_chem_comp_rdkit_properties.chi1n 21.729
_pdbe_chem_comp_rdkit_properties.chi2n 4.262
_pdbe_chem_comp_rdkit_properties.chi3n 4.262
_pdbe_chem_comp_rdkit_properties.chi4n 2.719
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.300
_pdbe_chem_comp_rdkit_properties.kappa1 8.632
_pdbe_chem_comp_rdkit_properties.kappa2 10.361
_pdbe_chem_comp_rdkit_properties.kappa3 4.986
_pdbe_chem_comp_rdkit_properties.Phi 2.484
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
KU9 UniChem PDBe KU9
KU9 UniChem PubChem 135567352
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
KU9 C1 0.114 4.167 1.693 ETKDGv3 1
KU9 C10 -6.202 -2.939 -2.933 ETKDGv3 2
KU9 C11 -5.994 -1.743 -2.079 ETKDGv3 3
KU9 C12 -4.907 -0.991 -2.290 ETKDGv3 4
KU9 C13 -4.490 0.217 -1.544 ETKDGv3 5
KU9 C14 0.377 1.721 1.859 ETKDGv3 6
KU9 C15 1.036 0.499 2.447 ETKDGv3 7
KU9 C16 3.244 0.609 1.187 ETKDGv3 8
KU9 C17 4.743 0.516 1.190 ETKDGv3 9
KU9 C18 4.669 -1.955 0.150 ETKDGv3 10
KU9 C19 3.448 -2.511 0.162 ETKDGv3 11
KU9 C2 -0.914 3.950 0.664 ETKDGv3 12
KU9 C20 2.911 -3.157 -1.053 ETKDGv3 13
KU9 C21 3.647 -3.198 -2.170 ETKDGv3 14
KU9 C22 4.999 -2.602 -2.187 ETKDGv3 15
KU9 C23 5.492 -2.013 -1.088 ETKDGv3 16
KU9 C24 3.078 0.695 3.738 ETKDGv3 17
KU9 C25 1.910 0.745 4.715 ETKDGv3 18
KU9 C26 0.676 0.317 3.923 ETKDGv3 19
KU9 C3 -1.249 2.677 0.345 ETKDGv3 20
KU9 C4 -2.323 2.343 -0.613 ETKDGv3 21
KU9 C5 -3.274 0.750 -2.345 ETKDGv3 22
KU9 C6 -2.813 -0.375 -3.311 ETKDGv3 23
KU9 C7 -3.944 -1.330 -3.309 ETKDGv3 24
KU9 C8 -4.099 -2.410 -4.083 ETKDGv3 25
KU9 C9 -5.303 -3.256 -3.884 ETKDGv3 26
KU9 N1 -2.197 1.181 -1.448 ETKDGv3 27
KU9 N2 -0.557 1.575 0.965 ETKDGv3 28
KU9 N3 2.485 0.631 2.411 ETKDGv3 29
KU9 N4 0.755 3.037 2.285 ETKDGv3 30
KU9 O1 0.434 5.333 2.044 ETKDGv3 31
KU9 O2 -1.474 5.069 0.040 ETKDGv3 32
KU9 O3 -3.377 3.035 -0.654 ETKDGv3 33
KU9 O4 2.642 0.633 0.079 ETKDGv3 34
KU9 S1 5.296 -1.167 1.641 ETKDGv3 35
KU9 CL1 7.106 -1.317 -1.135 ETKDGv3 36
KU9 H1 -7.078 -3.558 -2.786 ETKDGv3 37
KU9 H2 -6.704 -1.489 -1.303 ETKDGv3 38
KU9 H3 -5.310 0.967 -1.515 ETKDGv3 39
KU9 H4 -4.199 -0.073 -0.510 ETKDGv3 40
KU9 H5 0.734 -0.410 1.878 ETKDGv3 41
KU9 H6 5.161 1.239 1.919 ETKDGv3 42
KU9 H7 5.147 0.785 0.190 ETKDGv3 43
KU9 H8 2.840 -2.482 1.058 ETKDGv3 44
KU9 H9 1.921 -3.594 -1.038 ETKDGv3 45
KU9 H10 3.256 -3.670 -3.061 ETKDGv3 46
KU9 H11 5.587 -2.648 -3.095 ETKDGv3 47
KU9 H12 3.690 -0.213 3.922 ETKDGv3 48
KU9 H13 3.706 1.606 3.839 ETKDGv3 49
KU9 H14 2.082 0.074 5.585 ETKDGv3 50
KU9 H15 1.773 1.785 5.084 ETKDGv3 51
KU9 H16 0.473 -0.759 4.121 ETKDGv3 52
KU9 H17 -0.220 0.903 4.227 ETKDGv3 53
KU9 H18 -3.603 1.617 -2.962 ETKDGv3 54
KU9 H19 -2.636 0.024 -4.333 ETKDGv3 55
KU9 H20 -1.903 -0.899 -2.947 ETKDGv3 56
KU9 H21 -3.363 -2.667 -4.835 ETKDGv3 57
KU9 H22 -5.454 -4.130 -4.504 ETKDGv3 58
KU9 H23 -1.289 0.664 -1.439 ETKDGv3 59
KU9 H24 1.498 3.176 3.006 ETKDGv3 60
KU9 H25 -2.055 5.019 -0.786 ETKDGv3 61
#