data_L8G
#
_chem_comp.id L8G
_chem_comp.name
(5R,8S,11S)-5-methyl-8-(propan-2-yl)-11-[(1E)-4-sulfanylbut-1-en-1-yl]-3-thia-7,10,14,20,21-pentaazatricyclo[14.3.1.1~2,5~]henicosa-1(20),2(21),16,18-tetraene-6,9,13-trione
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C23 H31 N5 O3 S2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2014-10-23
_chem_comp.pdbx_modified_date 2015-04-03
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 489.654
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code L8G
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4RN1
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
L8G C1 C1 C 0 1 N N N N N N -2.967 10.908 -18.512 -2.900 -1.093 2.492 C1 L8G 1
L8G C2 C2 C 0 1 N N N N N N -2.044 10.068 -19.386 -3.764 -0.037 1.800 C2 L8G 2
L8G C3 C3 C 0 1 N N N N N N -2.206 8.599 -19.078 -2.984 0.593 0.675 C3 L8G 3
L8G C4 C4 C 0 1 N N N N N N -1.349 7.731 -19.610 -3.475 0.600 -0.539 C4 L8G 4
L8G C5 C5 C 0 1 N N S N N N -1.476 6.252 -19.331 -2.694 1.231 -1.663 C5 L8G 5
L8G C6 C6 C 0 1 N N N N N N -0.560 5.112 -21.252 -1.297 2.869 -0.567 C6 L8G 6
L8G C7 C7 C 0 1 N N S N N N 0.570 4.347 -21.886 0.017 3.301 0.043 C7 L8G 7
L8G C8 C8 C 0 1 N N N N N N -0.008 3.255 -22.783 1.016 3.644 -1.064 C8 L8G 8
L8G C9 C9 C 0 1 N N N N N N -0.892 2.302 -21.990 1.357 2.378 -1.853 C9 L8G 9
L8G C10 C10 C 0 1 N N N N N N 1.086 2.484 -23.516 0.399 4.680 -2.005 C10 L8G 10
L8G C11 C11 C 0 1 N N N N N N 2.714 3.844 -20.873 1.898 2.130 1.002 C11 L8G 11
L8G C12 C12 C 0 1 N N R N N N 3.492 3.067 -19.843 2.461 0.896 1.668 C12 L8G 12
L8G C13 C13 C 0 1 N N N N N N 4.682 3.901 -19.388 2.063 0.894 3.142 C13 L8G 13
L8G C14 C14 C 0 1 N N N N N N 3.961 1.762 -20.491 3.990 0.885 1.548 C14 L8G 14
L8G C15 C15 C 0 1 N N N N N N 2.171 1.563 -18.687 2.636 -1.131 0.462 C15 L8G 15
L8G C16 C16 C 0 1 Y N N N N N 1.103 1.127 -17.730 2.141 -2.321 -0.266 C16 L8G 16
L8G C17 C17 C 0 1 Y N N N N N 0.978 -0.212 -17.373 2.955 -3.423 -0.484 C17 L8G 17
L8G C18 C18 C 0 1 Y N N N N N -0.023 -0.594 -16.486 2.447 -4.508 -1.184 C18 L8G 18
L8G C19 C19 C 0 1 Y N N N N N -0.880 0.374 -15.979 1.145 -4.439 -1.660 C19 L8G 19
L8G C20 C20 C 0 1 Y N N N N N -0.724 1.702 -16.366 0.398 -3.301 -1.418 C20 L8G 20
L8G C21 C21 C 0 1 N N N N N N -1.651 2.761 -15.816 -1.009 -3.189 -1.958 C21 L8G 21
L8G C22 C22 C 0 1 N N N N N N -1.813 4.615 -17.477 -2.304 -1.162 -2.214 C22 L8G 22
L8G C23 C23 C 0 1 N N N N N N -1.321 5.999 -17.833 -2.511 0.216 -2.791 C23 L8G 23
L8G N1 N1 N 0 1 N N N N N N -0.411 5.504 -19.988 -1.364 1.647 -1.170 N1 L8G 24
L8G N2 N2 N 0 1 N N N N N N 1.398 3.644 -20.915 0.532 2.170 0.852 N2 L8G 25
L8G N3 N3 N 0 1 N N N N N N 2.634 2.735 -18.705 1.876 -0.257 1.013 N3 L8G 26
L8G N4 N4 N 0 1 Y N N N N N 0.255 2.049 -17.228 0.894 -2.296 -0.730 N4 L8G 27
L8G N5 N5 N 0 1 N N N N N N -1.324 4.069 -16.366 -1.168 -1.842 -2.550 N5 L8G 28
L8G O1 O1 O 0 1 N N N N N N -1.563 5.368 -21.899 -2.270 3.593 -0.523 O1 L8G 29
L8G O2 O2 O 0 1 N N N N N N 3.290 4.602 -21.635 2.611 3.035 0.623 O2 L8G 30
L8G O3 O3 O 0 1 N N N N N N -2.634 4.051 -18.179 -3.126 -1.654 -1.470 O3 L8G 31
L8G S1 S1 S 0 1 N N N N N N -2.780 12.660 -18.934 -3.840 -1.852 3.845 S1 L8G 32
L8G S2 S2 S 0 1 N N N N N N 2.861 0.567 -19.818 4.331 -0.689 0.693 S2 L8G 33
L8G H1 H1 H 0 1 N N N N N N -4.010 10.601 -18.680 -2.617 -1.860 1.771 H1 L8G 34
L8G H2 H2 H 0 1 N N N N N N -2.706 10.757 -17.454 -2.002 -0.622 2.892 H2 L8G 35
L8G H3 H3 H 0 1 N N N N N N -1.001 10.363 -19.198 -4.662 -0.508 1.399 H3 L8G 36
L8G H4 H4 H 0 1 N N N N N N -2.290 10.244 -20.444 -4.047 0.730 2.520 H4 L8G 37
L8G H5 H5 H 0 1 N N N N N N -3.005 8.258 -18.436 -2.019 1.038 0.871 H5 L8G 38
L8G H6 H6 H 0 1 N N N N N N -0.554 8.088 -20.248 -4.439 0.155 -0.735 H6 L8G 39
L8G H7 H7 H 0 1 N N N N N N -2.461 5.894 -19.665 -3.233 2.100 -2.039 H7 L8G 40
L8G H8 H8 H 0 1 N N N N N N 1.185 5.029 -22.491 -0.140 4.171 0.682 H8 L8G 41
L8G H9 H9 H 0 1 N N N N N N -0.638 3.744 -23.541 1.925 4.051 -0.621 H9 L8G 42
L8G H10 H10 H 0 1 N N N N N N -1.674 2.874 -21.469 0.448 1.970 -2.296 H10 L8G 43
L8G H11 H11 H 0 1 N N N N N N -1.361 1.581 -22.676 2.068 2.622 -2.642 H11 L8G 44
L8G H12 H12 H 0 1 N N N N N N -0.280 1.762 -21.253 1.796 1.639 -1.183 H12 L8G 45
L8G H13 H13 H 0 1 N N N N N N 1.714 3.187 -24.083 -0.451 4.238 -2.525 H13 L8G 46
L8G H14 H14 H 0 1 N N N N N N 1.707 1.945 -22.785 0.063 5.541 -1.427 H14 L8G 47
L8G H15 H15 H 0 1 N N N N N N 0.626 1.764 -24.208 1.144 4.999 -2.734 H15 L8G 48
L8G H16 H16 H 0 1 N N N N N N 5.256 3.341 -18.635 0.976 0.903 3.226 H16 L8G 49
L8G H17 H17 H 0 1 N N N N N N 5.327 4.121 -20.252 2.457 -0.002 3.623 H17 L8G 50
L8G H18 H18 H 0 1 N N N N N N 4.323 4.843 -18.949 2.473 1.778 3.631 H18 L8G 51
L8G H19 H19 H 0 1 N N N N N N 3.871 1.810 -21.586 4.335 1.730 0.951 H19 L8G 52
L8G H20 H20 H 0 1 N N N N N N 5.003 1.538 -20.219 4.453 0.897 2.534 H20 L8G 53
L8G H21 H21 H 0 1 N N N N N N 1.653 -0.949 -17.782 3.969 -3.436 -0.114 H21 L8G 54
L8G H22 H22 H 0 1 N N N N N N -0.132 -1.629 -16.196 3.051 -5.387 -1.354 H22 L8G 55
L8G H23 H23 H 0 1 N N N N N N -1.663 0.098 -15.288 0.721 -5.264 -2.212 H23 L8G 56
L8G H24 H24 H 0 1 N N N N N N -2.688 2.507 -16.082 -1.171 -3.948 -2.722 H24 L8G 57
L8G H25 H25 H 0 1 N N N N N N -1.551 2.795 -14.721 -1.726 -3.322 -1.148 H25 L8G 58
L8G H26 H26 H 0 1 N N N N N N -0.259 6.088 -17.559 -3.399 0.214 -3.423 H26 L8G 59
L8G H27 H27 H 0 1 N N N N N N -1.907 6.746 -17.277 -1.643 0.492 -3.389 H27 L8G 60
L8G H28 H28 H 0 1 N N N N N N 0.429 5.286 -19.491 -0.582 1.082 -1.268 H28 L8G 61
L8G H29 H29 H 0 1 N N N N N N 0.974 3.005 -20.274 -0.054 1.505 1.247 H29 L8G 62
L8G H30 H30 H 0 1 N N N N N N -0.661 4.616 -15.854 -0.501 -1.463 -3.144 H30 L8G 63
L8G H31 H31 H 0 1 N N N N N N -3.617 13.226 -18.116 -2.971 -2.744 4.354 H31 L8G 64
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
L8G C10 C8 SING N N 1
L8G C8 C9 SING N N 2
L8G C8 C7 SING N N 3
L8G O1 C6 DOUB N N 4
L8G C7 C6 SING N N 5
L8G C7 N2 SING N N 6
L8G O2 C11 DOUB N N 7
L8G C6 N1 SING N N 8
L8G N2 C11 SING N N 9
L8G C11 C12 SING N N 10
L8G C14 C12 SING N N 11
L8G C14 S2 SING N N 12
L8G N1 C5 SING N N 13
L8G C12 C13 SING N N 14
L8G C12 N3 SING N N 15
L8G S2 C15 SING N N 16
L8G C4 C5 SING N N 17
L8G C4 C3 DOUB N E 18
L8G C2 C3 SING N N 19
L8G C2 C1 SING N N 20
L8G C5 C23 SING N N 21
L8G S1 C1 SING N N 22
L8G N3 C15 DOUB N N 23
L8G C15 C16 SING N N 24
L8G O3 C22 DOUB N N 25
L8G C23 C22 SING N N 26
L8G C16 C17 DOUB Y N 27
L8G C16 N4 SING Y N 28
L8G C22 N5 SING N N 29
L8G C17 C18 SING Y N 30
L8G N4 C20 DOUB Y N 31
L8G C18 C19 DOUB Y N 32
L8G C20 C19 SING Y N 33
L8G C20 C21 SING N N 34
L8G N5 C21 SING N N 35
L8G C1 H1 SING N N 36
L8G C1 H2 SING N N 37
L8G C2 H3 SING N N 38
L8G C2 H4 SING N N 39
L8G C3 H5 SING N N 40
L8G C4 H6 SING N N 41
L8G C5 H7 SING N N 42
L8G C7 H8 SING N N 43
L8G C8 H9 SING N N 44
L8G C9 H10 SING N N 45
L8G C9 H11 SING N N 46
L8G C9 H12 SING N N 47
L8G C10 H13 SING N N 48
L8G C10 H14 SING N N 49
L8G C10 H15 SING N N 50
L8G C13 H16 SING N N 51
L8G C13 H17 SING N N 52
L8G C13 H18 SING N N 53
L8G C14 H19 SING N N 54
L8G C14 H20 SING N N 55
L8G C17 H21 SING N N 56
L8G C18 H22 SING N N 57
L8G C19 H23 SING N N 58
L8G C21 H24 SING N N 59
L8G C21 H25 SING N N 60
L8G C23 H26 SING N N 61
L8G C23 H27 SING N N 62
L8G N1 H28 SING N N 63
L8G N2 H29 SING N N 64
L8G N5 H30 SING N N 65
L8G S1 H31 SING N N 66
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
L8G SMILES ACDLabs 12.01 O=C1NC(C(=O)NC(/C=C/CCS)CC(=O)NCc3nc(C2=NC1(C)CS2)ccc3)C(C)C
L8G InChI InChI 1.03 InChI=1S/C23H31N5O3S2/c1-14(2)19-20(30)26-15(7-4-5-10-32)11-18(29)24-12-16-8-6-9-17(25-16)21-28-23(3,13-33-21)22(31)27-19/h4,6-9,14-15,19,32H,5,10-13H2,1-3H3,(H,24,29)(H,26,30)(H,27,31)/b7-4+/t15-,19+,23+/m1/s1
L8G InChIKey InChI 1.03 PFXMQZVRILDSDW-XUFAZQDHSA-N
L8G SMILES_CANONICAL CACTVS 3.385 CC(C)[C@@H]1NC(=O)[C@]2(C)CSC(=N2)c3cccc(CNC(=O)C[C@H](NC1=O)\C=C\CCS)n3
L8G SMILES CACTVS 3.385 CC(C)[CH]1NC(=O)[C]2(C)CSC(=N2)c3cccc(CNC(=O)C[CH](NC1=O)C=CCCS)n3
L8G SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 CC(C)[C@H]1C(=O)N[C@@H](CC(=O)NCc2cccc(n2)C3=N[C@@](CS3)(C(=O)N1)C)/C=C/CCS
L8G SMILES "OpenEye OEToolkits" 1.7.6 CC(C)C1C(=O)NC(CC(=O)NCc2cccc(n2)C3=NC(CS3)(C(=O)N1)C)C=CCCS
#
_pdbx_chem_comp_identifier.comp_id L8G
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program ACDLabs
_pdbx_chem_comp_identifier.program_version 12.01
_pdbx_chem_comp_identifier.identifier
(5R,8S,11S)-5-methyl-8-(propan-2-yl)-11-[(1E)-4-sulfanylbut-1-en-1-yl]-3-thia-7,10,14,20,21-pentaazatricyclo[14.3.1.1~2,5~]henicosa-1(20),2(21),16,18-tetraene-6,9,13-trione
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
L8G 'Create component' 2014-10-23 RCSB
L8G 'Initial release' 2015-04-08 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
L8G C1 C 4.287 3.747 1
L8G C2 C 5.735 3.359 2
L8G C3 C 6.124 1.910 3
L8G C4 C 7.573 1.522 4
L8G C5 C 7.961 0.073 5
L8G C6 C 6.662 -2.177 6
L8G C7 C 7.961 -2.927 7
L8G C8 C 7.573 -4.376 8
L8G C9 C 8.633 -5.437 9
L8G C10 C 6.124 -4.764 10
L8G C11 C 10.559 -2.927 11
L8G C12 C 11.858 -2.177 12
L8G C13 C 13.157 -1.427 13
L8G C14 C 12.408 -3.571 14
L8G C15 C 14.456 -2.177 15
L8G C16 C 14.456 -0.677 16
L8G C17 C 15.755 0.073 17
L8G C18 C 15.755 1.573 18
L8G C19 C 14.456 2.323 19
L8G C20 C 13.157 1.573 20
L8G C21 C 11.858 2.323 21
L8G C22 C 10.559 0.073 22
L8G C23 C 9.260 -0.677 23
L8G N1 N 6.662 -0.677 24
L8G N2 N 9.260 -2.177 25
L8G N3 N 13.157 -2.927 26
L8G N4 N 13.157 0.073 27
L8G N5 N 10.559 1.573 28
L8G O1 O 5.363 -2.927 29
L8G O2 O 10.559 -4.427 30
L8G O3 O 11.858 0.823 31
L8G S1 S 3.898 5.196 32
L8G S2 S 13.906 -3.571 33
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
L8G C10 C8 SINGLE NONE 1
L8G C8 C9 SINGLE NONE 2
L8G C7 C8 SINGLE BEGINWEDGE 3
L8G O1 C6 DOUBLE NONE 4
L8G C7 C6 SINGLE NONE 5
L8G C7 N2 SINGLE NONE 6
L8G O2 C11 DOUBLE NONE 7
L8G C6 N1 SINGLE NONE 8
L8G N2 C11 SINGLE NONE 9
L8G C11 C12 SINGLE NONE 10
L8G C14 C12 SINGLE NONE 11
L8G C14 S2 SINGLE NONE 12
L8G N1 C5 SINGLE NONE 13
L8G C12 C13 SINGLE BEGINDASH 14
L8G C12 N3 SINGLE NONE 15
L8G S2 C15 SINGLE NONE 16
L8G C5 C4 SINGLE BEGINDASH 17
L8G C4 C3 DOUBLE NONE 18
L8G C2 C3 SINGLE ENDDOWNRIGHT 19
L8G C2 C1 SINGLE NONE 20
L8G C5 C23 SINGLE NONE 21
L8G S1 C1 SINGLE NONE 22
L8G N3 C15 DOUBLE NONE 23
L8G C15 C16 SINGLE NONE 24
L8G O3 C22 DOUBLE NONE 25
L8G C23 C22 SINGLE NONE 26
L8G C16 C17 DOUBLE NONE 27
L8G C16 N4 SINGLE NONE 28
L8G C22 N5 SINGLE NONE 29
L8G C17 C18 SINGLE NONE 30
L8G N4 C20 DOUBLE NONE 31
L8G C18 C19 DOUBLE NONE 32
L8G C20 C19 SINGLE NONE 33
L8G C20 C21 SINGLE NONE 34
L8G N5 C21 SINGLE NONE 35
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
L8G MurckoScaffold S1 scaffold O=C1CCNC(=O)CNC(=O)C2CSC(=N2)c2cccc(n2)CN1 InChI=1S/C15H17N5O3S/c21-12-4-5-16-13(22)7-18-14(23)11-8-24-15(20-11)10-3-1-2-9(19-10)6-17-12/h1-3,11H,4-8H2,(H,16,22)(H,17,21)(H,18,23) SDCULBABKMXKSP-UHFFFAOYSA-N
L8G amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
L8G peptide F2 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
L8G pyridine F3 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
L8G C5 S1 1
L8G C6 S1 1
L8G C7 S1 1
L8G C11 S1 1
L8G C12 S1 1
L8G C14 S1 1
L8G C15 S1 1
L8G C16 S1 1
L8G C17 S1 1
L8G C18 S1 1
L8G C19 S1 1
L8G C20 S1 1
L8G C21 S1 1
L8G C22 S1 1
L8G C23 S1 1
L8G N1 S1 1
L8G N2 S1 1
L8G N3 S1 1
L8G N4 S1 1
L8G N5 S1 1
L8G O1 S1 1
L8G O2 S1 1
L8G O3 S1 1
L8G S2 S1 1
L8G N1 F1 1
L8G C6 F1 1
L8G O1 F1 1
L8G C7 F1 1
L8G N2 F1 2
L8G C11 F1 2
L8G O2 F1 2
L8G C12 F1 2
L8G N5 F1 3
L8G C22 F1 3
L8G O3 F1 3
L8G C23 F1 3
L8G O1 F2 1
L8G C6 F2 1
L8G C7 F2 1
L8G N2 F2 1
L8G O2 F2 2
L8G C11 F2 2
L8G C12 F2 2
L8G N3 F2 2
L8G C16 F3 1
L8G C17 F3 1
L8G C18 F3 1
L8G C19 F3 1
L8G C20 F3 1
L8G N4 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id L8G
_pdbe_chem_comp_rdkit_properties.exactmw 489.187
_pdbe_chem_comp_rdkit_properties.amw 489.667
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 8
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 8
_pdbe_chem_comp_rdkit_properties.NumHBD 4
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 33
_pdbe_chem_comp_rdkit_properties.NumAtoms 64
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 10
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 3
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.522
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 4
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 3
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 247.236
_pdbe_chem_comp_rdkit_properties.tpsa 112.550
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.746
_pdbe_chem_comp_rdkit_properties.CrippenMR 133.878
_pdbe_chem_comp_rdkit_properties.chi0v 17.410
_pdbe_chem_comp_rdkit_properties.chi1v 9.436
_pdbe_chem_comp_rdkit_properties.chi2v 4.289
_pdbe_chem_comp_rdkit_properties.chi3v 4.289
_pdbe_chem_comp_rdkit_properties.chi4v 2.772
_pdbe_chem_comp_rdkit_properties.chi0n 46.777
_pdbe_chem_comp_rdkit_properties.chi1n 23.461
_pdbe_chem_comp_rdkit_properties.chi2n 3.311
_pdbe_chem_comp_rdkit_properties.chi3n 3.311
_pdbe_chem_comp_rdkit_properties.chi4n 1.968
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.330
_pdbe_chem_comp_rdkit_properties.kappa1 6.660
_pdbe_chem_comp_rdkit_properties.kappa2 11.197
_pdbe_chem_comp_rdkit_properties.kappa3 6.599
_pdbe_chem_comp_rdkit_properties.Phi 2.260
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
L8G UniChem ChEMBL CHEMBL3593413
L8G UniChem PDBe L8G
L8G UniChem ZINC ZINC000230838923
L8G UniChem PubChem 91667420
L8G UniChem BindingDb 50098422
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
L8G C1 5.681 0.228 -3.237 ETKDGv3 1
L8G C2 4.280 0.834 -3.338 ETKDGv3 2
L8G C3 3.442 0.462 -2.146 ETKDGv3 3
L8G C4 3.679 0.982 -0.930 ETKDGv3 4
L8G C5 2.833 0.633 0.272 ETKDGv3 5
L8G C6 0.895 2.191 -0.289 ETKDGv3 6
L8G C7 -0.597 2.452 -0.355 ETKDGv3 7
L8G C8 -1.220 2.618 1.064 ETKDGv3 8
L8G C9 -0.633 3.830 1.802 ETKDGv3 9
L8G C10 -1.097 1.357 1.934 ETKDGv3 10
L8G C11 -2.698 1.404 -1.353 ETKDGv3 11
L8G C12 -3.441 0.091 -1.455 ETKDGv3 12
L8G C13 -3.449 -0.389 -2.913 ETKDGv3 13
L8G C14 -4.876 0.193 -0.894 ETKDGv3 14
L8G C15 -3.524 -1.675 0.060 ETKDGv3 15
L8G C16 -2.940 -2.523 1.113 ETKDGv3 16
L8G C17 -3.639 -3.500 1.715 ETKDGv3 17
L8G C18 -3.003 -4.288 2.790 ETKDGv3 18
L8G C19 -1.744 -4.024 3.158 ETKDGv3 19
L8G C20 -0.999 -2.947 2.471 ETKDGv3 20
L8G C21 0.382 -2.559 2.920 ETKDGv3 21
L8G C22 2.287 -1.221 1.900 ETKDGv3 22
L8G C23 3.087 -0.831 0.689 ETKDGv3 23
L8G N1 1.412 0.875 -0.012 ETKDGv3 24
L8G N2 -1.281 1.403 -1.125 ETKDGv3 25
L8G N3 -2.765 -0.893 -0.626 ETKDGv3 26
L8G N4 -1.588 -2.261 1.533 ETKDGv3 27
L8G N5 1.206 -2.157 1.779 ETKDGv3 28
L8G O1 1.689 3.160 -0.431 ETKDGv3 29
L8G O2 -3.310 2.498 -1.502 ETKDGv3 30
L8G O3 2.565 -0.710 3.019 ETKDGv3 31
L8G S1 6.652 0.630 -4.723 ETKDGv3 32
L8G S2 -5.280 -1.423 -0.152 ETKDGv3 33
L8G H1 5.609 -0.877 -3.152 ETKDGv3 34
L8G H2 6.212 0.623 -2.345 ETKDGv3 35
L8G H3 4.344 1.941 -3.417 ETKDGv3 36
L8G H4 3.784 0.450 -4.255 ETKDGv3 37
L8G H5 2.609 -0.219 -2.291 ETKDGv3 38
L8G H6 4.494 1.689 -0.798 ETKDGv3 39
L8G H7 3.143 1.290 1.115 ETKDGv3 40
L8G H8 -0.747 3.409 -0.904 ETKDGv3 41
L8G H9 -2.305 2.823 0.941 ETKDGv3 42
L8G H10 -1.179 3.996 2.756 ETKDGv3 43
L8G H11 -0.739 4.746 1.182 ETKDGv3 44
L8G H12 0.441 3.674 2.035 ETKDGv3 45
L8G H13 -1.493 0.474 1.396 ETKDGv3 46
L8G H14 -0.041 1.166 2.220 ETKDGv3 47
L8G H15 -1.690 1.481 2.865 ETKDGv3 48
L8G H16 -3.958 0.353 -3.565 ETKDGv3 49
L8G H17 -3.980 -1.361 -3.001 ETKDGv3 50
L8G H18 -2.409 -0.527 -3.280 ETKDGv3 51
L8G H19 -5.618 0.456 -1.678 ETKDGv3 52
L8G H20 -4.932 0.951 -0.082 ETKDGv3 53
L8G H21 -4.659 -3.723 1.429 ETKDGv3 54
L8G H22 -3.560 -5.074 3.283 ETKDGv3 55
L8G H23 -1.280 -4.595 3.953 ETKDGv3 56
L8G H24 0.284 -1.718 3.639 ETKDGv3 57
L8G H25 0.874 -3.411 3.436 ETKDGv3 58
L8G H26 4.166 -0.964 0.923 ETKDGv3 59
L8G H27 2.846 -1.513 -0.155 ETKDGv3 60
L8G H28 0.741 0.079 0.067 ETKDGv3 61
L8G H29 -0.742 0.594 -1.508 ETKDGv3 62
L8G H30 1.072 -2.650 0.866 ETKDGv3 63
L8G H31 6.709 2.002 -4.411 ETKDGv3 64
#