data_LAP
#
_chem_comp.id LAP
_chem_comp.name "[2-((1-OXODODECANOXY-(2-HYDROXY-3-PROPANYL))-PHOSPHONATE-OXY)-ETHYL]-TRIMETHYLAMMONIUM"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C20 H43 N O7 P"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms "L-ALFA-LYSOPHOSPHATIDYLCHOLINE, LAUROYL"
_chem_comp.pdbx_formal_charge 1
_chem_comp.pdbx_initial_date 2002-09-02
_chem_comp.pdbx_modified_date 2020-06-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 440.532
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code LAP
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag Y
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1MID
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
LAP O1 O1 O 0 1 N N N N N N 18.223 5.076 7.831 -2.084 -8.438 -12.236 O1 LAP 1
LAP O2 O2 O 0 1 N N N N N N 20.130 5.434 9.288 -4.387 -8.503 -12.343 O2 LAP 2
LAP C1 C1 C 0 1 N N N N N N 18.894 4.455 9.035 -3.334 -8.697 -11.751 C1 LAP 3
LAP C2 C2 C 0 1 N N N N N N 18.895 3.143 9.751 -3.212 -9.236 -10.343 C2 LAP 4
LAP C3 C3 C 0 1 N N N N N N 17.734 2.228 9.344 -4.384 -10.128 -9.935 C3 LAP 5
LAP C4 C4 C 0 1 N N N N N N 16.960 1.780 10.538 -4.537 -11.349 -10.848 C4 LAP 6
LAP C5 C5 C 0 1 N N N N N N 15.483 1.684 10.339 -5.734 -12.206 -10.432 C5 LAP 7
LAP C6 C6 C 0 1 N N N N N N 14.711 1.317 11.561 -5.909 -13.407 -11.363 C6 LAP 8
LAP C7 C7 C 0 1 N N N N N N 13.233 1.512 11.468 -7.127 -14.244 -10.965 C7 LAP 9
LAP C8 C8 C 0 1 N N N N N N 12.736 2.004 10.144 -7.299 -15.512 -11.806 C8 LAP 10
LAP C9 C9 C 0 1 N N N N N N 11.250 2.069 10.005 -8.450 -16.438 -11.399 C9 LAP 11
LAP C10 C10 C 0 1 N N N N N N 10.762 2.104 8.587 -8.530 -17.715 -12.240 C10 LAP 12
LAP C11 C11 C 0 1 N N N N N N 9.327 2.631 8.429 -9.734 -18.595 -11.891 C11 LAP 13
LAP C12 C12 C 0 1 N N N N N N 8.350 1.590 7.976 -9.837 -19.852 -12.740 C12 LAP 14
LAP C13 C13 C 0 1 N N N N N N ? ? ? -2.037 -7.890 -13.558 C13 LAP 15
LAP C14 C14 C 0 1 N N N N N N ? ? ? -0.583 -7.661 -13.947 C14 LAP 16
LAP C15 C15 C 0 1 N N N N N N ? ? ? 0.218 -8.957 -13.899 C15 LAP 17
LAP C16 C16 C 0 1 N N N N N N ? ? ? -2.036 -12.258 -15.559 C16 LAP 18
LAP C17 C17 C 0 1 N N N N N N ? ? ? -2.754 -13.075 -16.615 C17 LAP 19
LAP C18 C18 C 0 1 N N N N N N ? ? ? -4.794 -11.705 -16.242 C18 LAP 20
LAP C19 C19 C 0 1 N N N N N N ? ? ? -4.969 -13.915 -17.365 C19 LAP 21
LAP C20 C20 C 0 1 N N N N N N ? ? ? -4.443 -13.792 -14.939 C20 LAP 22
LAP O3 O3 O 0 1 N N N N N N ? ? ? -0.017 -6.737 -13.014 O3 LAP 23
LAP O4 O4 O 0 1 N N N N N N ? ? ? -0.345 -9.907 -14.798 O4 LAP 24
LAP O5 O5 O 0 1 N N N N N N ? ? ? 1.787 -11.351 -15.349 O5 LAP 25
LAP O6 O6 O 0 1 N N N N N N ? ? ? -0.657 -12.180 -15.875 O6 LAP 26
LAP O7 O7 O 0 1 N N N N N N ? ? ? 0.116 -12.000 -13.440 O7 LAP 27
LAP N8 N8 N 1 1 N N N N N N ? ? ? -4.204 -13.121 -16.298 N8 LAP 28
LAP P9 P9 P 0 1 N N N N N N ? ? ? 0.351 -11.361 -14.909 P9 LAP 29
LAP H21 1H2 H 0 1 N N N N N N 19.838 2.626 9.519 -2.274 -9.796 -10.253 H21 LAP 30
LAP H22 2H2 H 0 1 N N N N N N 18.784 3.356 10.824 -3.167 -8.373 -9.669 H22 LAP 31
LAP H31 1H3 H 0 1 N N N N N N 17.063 2.781 8.670 -4.216 -10.473 -8.907 H31 LAP 32
LAP H32 2H3 H 0 1 N N N N N N 18.147 1.341 8.841 -5.316 -9.550 -9.928 H32 LAP 33
LAP H41 1H4 H 0 1 N N N N N N 17.324 0.780 10.814 -3.623 -11.953 -10.807 H41 LAP 34
LAP H42 2H4 H 0 1 N N N N N N 17.118 2.545 11.313 -4.664 -11.027 -11.888 H42 LAP 35
LAP H51 1H5 H 0 1 N N N N N N 15.126 2.667 9.999 -5.595 -12.556 -9.402 H51 LAP 36
LAP H52 2H5 H 0 1 N N N N N N 15.317 0.877 9.610 -6.645 -11.595 -10.446 H52 LAP 37
LAP H61 1H6 H 0 1 N N N N N N 14.893 0.251 11.760 -5.008 -14.031 -11.332 H61 LAP 38
LAP H62 2H6 H 0 1 N N N N N N 15.059 1.991 12.358 -6.022 -13.048 -12.392 H62 LAP 39
LAP H71 1H7 H 0 1 N N N N N N 12.757 0.540 11.662 -8.033 -13.631 -11.017 H71 LAP 40
LAP H72 2H7 H 0 1 N N N N N N 12.978 2.291 12.202 -7.024 -14.547 -9.915 H72 LAP 41
LAP H81 1H8 H 0 1 N N N N N N 13.128 3.021 9.999 -7.444 -15.222 -12.854 H81 LAP 42
LAP H82 2H8 H 0 1 N N N N N N 13.084 1.277 9.395 -6.360 -16.079 -11.773 H82 LAP 43
LAP H91 1H9 H 0 1 N N N N N N 10.827 1.175 10.486 -8.369 -16.696 -10.337 H91 LAP 44
LAP H92 2H9 H 0 1 N N N N N N 10.929 3.011 10.474 -9.381 -15.870 -11.507 H92 LAP 45
LAP H101 1H10 H 0 0 N N N N N N 11.430 2.764 8.015 -7.626 -18.315 -12.083 H101 LAP 46
LAP H102 2H10 H 0 0 N N N N N N 10.763 1.066 8.223 -8.560 -17.457 -13.305 H102 LAP 47
LAP H111 1H11 H 0 0 N N N N N N 8.993 3.011 9.406 -10.659 -18.015 -11.982 H111 LAP 48
LAP H112 2H11 H 0 0 N N N N N N 9.352 3.411 7.654 -9.649 -18.894 -10.839 H112 LAP 49
LAP H121 1H12 H 0 0 N N N N N N 8.110 1.749 6.914 -10.051 -19.614 -13.786 H121 LAP 50
LAP H122 2H12 H 0 0 N N N N N N 8.792 0.591 8.107 -10.651 -20.486 -12.373 H122 LAP 51
LAP H123 3H12 H 0 0 N N N N N N 7.430 1.666 8.574 -8.910 -20.433 -12.699 H123 LAP 52
LAP H131 1H13 H 0 0 N N N N N N ? ? ? -2.521 -8.603 -14.234 H131 LAP 53
LAP H132 2H13 H 0 0 N N N N N N ? ? ? -2.597 -6.950 -13.555 H132 LAP 54
LAP H14 H14 H 0 1 N N N N N N ? ? ? -0.517 -7.191 -14.935 H14 LAP 55
LAP H151 1H15 H 0 0 N N N N N N ? ? ? 0.214 -9.396 -12.896 H151 LAP 56
LAP H152 2H15 H 0 0 N N N N N N ? ? ? 1.255 -8.792 -14.208 H152 LAP 57
LAP H161 1H16 H 0 0 N N N N N N ? ? ? -2.437 -11.240 -15.541 H161 LAP 58
LAP H162 2H16 H 0 0 N N N N N N ? ? ? -2.149 -12.697 -14.562 H162 LAP 59
LAP H171 1H17 H 0 0 N N N N N N ? ? ? -2.410 -14.113 -16.637 H171 LAP 60
LAP H172 2H17 H 0 0 N N N N N N ? ? ? -2.664 -12.623 -17.606 H172 LAP 61
LAP H181 1H18 H 0 0 N N N N N N ? ? ? -5.879 -11.792 -16.321 H181 LAP 62
LAP H182 2H18 H 0 0 N N N N N N ? ? ? -4.505 -11.260 -15.287 H182 LAP 63
LAP H183 3H18 H 0 0 N N N N N N ? ? ? -4.383 -11.139 -17.079 H183 LAP 64
LAP H191 1H19 H 0 0 N N N N N N ? ? ? -6.006 -14.006 -17.034 H191 LAP 65
LAP H192 2H19 H 0 0 N N N N N N ? ? ? -4.904 -13.363 -18.304 H192 LAP 66
LAP H193 3H19 H 0 0 N N N N N N ? ? ? -4.498 -14.896 -17.452 H193 LAP 67
LAP H201 1H20 H 0 0 N N N N N N ? ? ? -5.522 -13.876 -14.793 H201 LAP 68
LAP H202 2H20 H 0 0 N N N N N N ? ? ? -3.973 -14.777 -14.965 H202 LAP 69
LAP H203 3H20 H 0 0 N N N N N N ? ? ? -3.991 -13.162 -14.170 H203 LAP 70
LAP HO3 HO3 H 0 1 N N N N N N ? ? ? -0.597 -6.745 -12.238 HO3 LAP 71
LAP HO7 HO7 H 0 1 N N N N N N ? ? ? 0.710 -11.734 -12.707 HO7 LAP 72
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
LAP O1 C1 SING N N 1
LAP O1 C13 SING N N 2
LAP O2 C1 DOUB N N 3
LAP C1 C2 SING N N 4
LAP C2 C3 SING N N 5
LAP C2 H21 SING N N 6
LAP C2 H22 SING N N 7
LAP C3 C4 SING N N 8
LAP C3 H31 SING N N 9
LAP C3 H32 SING N N 10
LAP C4 C5 SING N N 11
LAP C4 H41 SING N N 12
LAP C4 H42 SING N N 13
LAP C5 C6 SING N N 14
LAP C5 H51 SING N N 15
LAP C5 H52 SING N N 16
LAP C6 C7 SING N N 17
LAP C6 H61 SING N N 18
LAP C6 H62 SING N N 19
LAP C7 C8 SING N N 20
LAP C7 H71 SING N N 21
LAP C7 H72 SING N N 22
LAP C8 C9 SING N N 23
LAP C8 H81 SING N N 24
LAP C8 H82 SING N N 25
LAP C9 C10 SING N N 26
LAP C9 H91 SING N N 27
LAP C9 H92 SING N N 28
LAP C10 C11 SING N N 29
LAP C10 H101 SING N N 30
LAP C10 H102 SING N N 31
LAP C11 C12 SING N N 32
LAP C11 H111 SING N N 33
LAP C11 H112 SING N N 34
LAP C12 H121 SING N N 35
LAP C12 H122 SING N N 36
LAP C12 H123 SING N N 37
LAP C13 C14 SING N N 38
LAP C13 H131 SING N N 39
LAP C13 H132 SING N N 40
LAP C14 C15 SING N N 41
LAP C14 O3 SING N N 42
LAP C14 H14 SING N N 43
LAP C15 O4 SING N N 44
LAP C15 H151 SING N N 45
LAP C15 H152 SING N N 46
LAP C16 C17 SING N N 47
LAP C16 O6 SING N N 48
LAP C16 H161 SING N N 49
LAP C16 H162 SING N N 50
LAP C17 N8 SING N N 51
LAP C17 H171 SING N N 52
LAP C17 H172 SING N N 53
LAP C18 N8 SING N N 54
LAP C18 H181 SING N N 55
LAP C18 H182 SING N N 56
LAP C18 H183 SING N N 57
LAP C19 N8 SING N N 58
LAP C19 H191 SING N N 59
LAP C19 H192 SING N N 60
LAP C19 H193 SING N N 61
LAP C20 N8 SING N N 62
LAP C20 H201 SING N N 63
LAP C20 H202 SING N N 64
LAP C20 H203 SING N N 65
LAP O3 HO3 SING N N 66
LAP O4 P9 SING N N 67
LAP O5 P9 DOUB N N 68
LAP O6 P9 SING N N 69
LAP O7 P9 SING N N 70
LAP O7 HO7 SING N N 71
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
LAP SMILES ACDLabs 10.04 O=C(OCC(O)COP(=O)(OCC[N+](C)(C)C)O)CCCCCCCCCCC
LAP SMILES_CANONICAL CACTVS 3.341 CCCCCCCCCCCC(=O)OCC(O)CO[P](O)(=O)OCC[N+](C)(C)C
LAP SMILES CACTVS 3.341 CCCCCCCCCCCC(=O)OCC(O)CO[P](O)(=O)OCC[N+](C)(C)C
LAP SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 CCCCCCCCCCCC(=O)OC[C@H](CO[P@@](=O)(O)OCC[N+](C)(C)C)O
LAP SMILES "OpenEye OEToolkits" 1.5.0 CCCCCCCCCCCC(=O)OCC(COP(=O)(O)OCC[N+](C)(C)C)O
LAP InChI InChI 1.03 InChI=1S/C20H42NO7P/c1-5-6-7-8-9-10-11-12-13-14-20(23)26-17-19(22)18-28-29(24,25)27-16-15-21(2,3)4/h19,22H,5-18H2,1-4H3/p+1
LAP InChIKey InChI 1.03 BWKILASWCLJPBO-UHFFFAOYSA-O
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
LAP "SYSTEMATIC NAME" ACDLabs 10.04 "4,7-dihydroxy-N,N,N-trimethyl-10-oxo-3,5,9-trioxa-4-phosphahenicosan-1-aminium 4-oxide"
LAP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 2-[[(2R)-3-dodecanoyloxy-2-hydroxy-propoxy]-hydroxy-phosphoryl]oxyethyl-trimethyl-azanium
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
LAP 'Create component' 2002-09-02 RCSB
LAP 'Modify descriptor' 2011-06-04 RCSB
LAP 'Modify synonyms' 2020-06-05 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id LAP
_pdbx_chem_comp_synonyms.name "L-ALFA-LYSOPHOSPHATIDYLCHOLINE, LAUROYL"
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_drugbank_details.comp_id LAP
_pdbe_chem_comp_drugbank_details.drugbank_id DB01707
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name 'L-Alfa-Lysophosphatidylcholine, Lauroyl'
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number ?
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
_pdbe_chem_comp_synonyms.comp_id LAP
_pdbe_chem_comp_synonyms.name 'L-ALFA-LYSOPHOSPHATIDYLCHOLINE, LAUROYL'
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_drugbank_classification.comp_id LAP
_pdbe_chem_comp_drugbank_classification.drugbank_id DB01707
_pdbe_chem_comp_drugbank_classification.parent 1-acyl-sn-glycero-3-phosphocholines
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class Glycerophospholipids
_pdbe_chem_comp_drugbank_classification.superclass 'Lipids and lipid-like molecules'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as 1-acyl-sn-glycero-3-phosphocholines. These are glycerophosphocholines in which the glycerol is esterified with a fatty acid at O-1 position, and linked at position 3 to a phosphocholine.'
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
LAP O1 O 15.990 0.142 1
LAP O2 O 17.290 -2.107 2
LAP C1 C 17.290 -0.608 3
LAP C2 C 18.588 0.142 4
LAP C3 C 19.887 -0.608 5
LAP C4 C 21.187 0.142 6
LAP C5 C 22.486 -0.608 7
LAP C6 C 23.785 0.142 8
LAP C7 C 25.084 -0.608 9
LAP C8 C 26.383 0.142 10
LAP C9 C 27.682 -0.608 11
LAP C10 C 28.981 0.142 12
LAP C11 C 30.280 -0.608 13
LAP C12 C 31.579 0.142 14
LAP C13 C 14.691 -0.608 15
LAP C14 C 13.392 0.142 16
LAP C15 C 12.093 -0.608 17
LAP C16 C 6.897 -0.608 18
LAP C17 C 5.598 -1.357 19
LAP C18 C 3.000 0.142 20
LAP C19 C 3.549 -1.907 21
LAP C20 C 5.049 0.692 22
LAP O3 O 13.392 1.643 23
LAP O4 O 10.794 0.142 24
LAP O5 O 8.745 0.692 25
LAP O6 O 8.196 -1.357 26
LAP O7 O 10.245 -1.907 27
LAP N8 N 4.299 -0.608 28
LAP P9 P 9.495 -0.608 29
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
LAP O1 C1 SINGLE NONE 1
LAP O1 C13 SINGLE NONE 2
LAP O2 C1 DOUBLE NONE 3
LAP C1 C2 SINGLE NONE 4
LAP C2 C3 SINGLE NONE 5
LAP C3 C4 SINGLE NONE 6
LAP C4 C5 SINGLE NONE 7
LAP C5 C6 SINGLE NONE 8
LAP C6 C7 SINGLE NONE 9
LAP C7 C8 SINGLE NONE 10
LAP C8 C9 SINGLE NONE 11
LAP C9 C10 SINGLE NONE 12
LAP C10 C11 SINGLE NONE 13
LAP C11 C12 SINGLE NONE 14
LAP C13 C14 SINGLE NONE 15
LAP C14 C15 SINGLE NONE 16
LAP C14 O3 SINGLE BEGINDASH 17
LAP C15 O4 SINGLE NONE 18
LAP C16 C17 SINGLE NONE 19
LAP C16 O6 SINGLE NONE 20
LAP C17 N8 SINGLE NONE 21
LAP C18 N8 SINGLE NONE 22
LAP C19 N8 SINGLE NONE 23
LAP C20 N8 SINGLE NONE 24
LAP O4 P9 SINGLE NONE 25
LAP O5 P9 DOUBLE NONE 26
LAP O6 P9 SINGLE NONE 27
LAP P9 O7 SINGLE BEGINDASH 28
#
_pdbe_chem_comp_substructure.comp_id LAP
_pdbe_chem_comp_substructure.substructure_name phosphate
_pdbe_chem_comp_substructure.id F1
_pdbe_chem_comp_substructure.substructure_type fragment
_pdbe_chem_comp_substructure.substructure_smiles O=P(O)(O)O
_pdbe_chem_comp_substructure.substructure_inchis InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4)
_pdbe_chem_comp_substructure.substructure_inchikeys NBIIXXVUZAFLBC-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
LAP O4 F1 1
LAP P9 F1 1
LAP O5 F1 1
LAP O6 F1 1
LAP O7 F1 1
#
_pdbe_chem_comp_rdkit_properties.comp_id LAP
_pdbe_chem_comp_rdkit_properties.exactmw 440.277
_pdbe_chem_comp_rdkit_properties.amw 440.538
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 8
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 25
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 29
_pdbe_chem_comp_rdkit_properties.NumAtoms 72
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 9
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.950
_pdbe_chem_comp_rdkit_properties.NumRings 0
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 2
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 236.870
_pdbe_chem_comp_rdkit_properties.tpsa 102.290
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.651
_pdbe_chem_comp_rdkit_properties.CrippenMR 113.439
_pdbe_chem_comp_rdkit_properties.chi0v 14.647
_pdbe_chem_comp_rdkit_properties.chi1v 7.810
_pdbe_chem_comp_rdkit_properties.chi2v 2.152
_pdbe_chem_comp_rdkit_properties.chi3v 2.152
_pdbe_chem_comp_rdkit_properties.chi4v 1.085
_pdbe_chem_comp_rdkit_properties.chi0n 56.752
_pdbe_chem_comp_rdkit_properties.chi1n 27.666
_pdbe_chem_comp_rdkit_properties.chi2n 1.522
_pdbe_chem_comp_rdkit_properties.chi3n 1.522
_pdbe_chem_comp_rdkit_properties.chi4n 0.701
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -0.500
_pdbe_chem_comp_rdkit_properties.kappa1 4.336
_pdbe_chem_comp_rdkit_properties.kappa2 16.225
_pdbe_chem_comp_rdkit_properties.kappa3 20.548
_pdbe_chem_comp_rdkit_properties.Phi 2.426
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
LAP UniChem DrugBank DB01707
LAP UniChem PDBe LAP
LAP UniChem SureChEMBL SCHEMBL20851971
LAP UniChem PubChem 3045269
LAP UniChem BRENDA 140278
LAP UniChem BRENDA 17757
LAP UniChem BRENDA 21057
LAP UniChem BRENDA 38433
LAP UniChem BRENDA 78482
LAP UniChem 'Probes And Drugs' PD060276
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
LAP O1 0.355 -2.137 1.459 ETKDGv3 1
LAP O2 1.085 -0.547 -0.055 ETKDGv3 2
LAP C1 1.182 -1.714 0.413 ETKDGv3 3
LAP C2 2.220 -2.648 -0.127 ETKDGv3 4
LAP C3 3.393 -2.826 0.850 ETKDGv3 5
LAP C4 4.146 -1.523 1.193 ETKDGv3 6
LAP C5 4.733 -0.766 -0.012 ETKDGv3 7
LAP C6 5.810 -1.571 -0.759 ETKDGv3 8
LAP C7 6.384 -0.822 -1.976 ETKDGv3 9
LAP C8 7.113 0.497 -1.656 ETKDGv3 10
LAP C9 8.328 0.303 -0.733 ETKDGv3 11
LAP C10 9.117 1.604 -0.517 ETKDGv3 12
LAP C11 9.980 1.982 -1.730 ETKDGv3 13
LAP C12 10.836 3.210 -1.434 ETKDGv3 14
LAP C13 -0.676 -1.328 2.022 ETKDGv3 15
LAP C14 -1.894 -1.273 1.090 ETKDGv3 16
LAP C15 -3.006 -0.414 1.705 ETKDGv3 17
LAP C16 -7.529 1.686 0.902 ETKDGv3 18
LAP C17 -8.728 1.802 -0.064 ETKDGv3 19
LAP C18 -10.697 0.893 -1.114 ETKDGv3 20
LAP C19 -10.424 0.603 1.254 ETKDGv3 21
LAP C20 -9.032 -0.634 -0.295 ETKDGv3 22
LAP O3 -2.364 -2.579 0.872 ETKDGv3 23
LAP O4 -4.075 -0.315 0.794 ETKDGv3 24
LAP O5 -5.853 -0.118 2.726 ETKDGv3 25
LAP O6 -6.565 0.807 0.369 ETKDGv3 26
LAP O7 -4.713 2.122 1.979 ETKDGv3 27
LAP N8 -9.700 0.664 -0.039 ETKDGv3 28
LAP P9 -5.316 0.609 1.513 ETKDGv3 29
LAP H21 2.585 -2.297 -1.115 ETKDGv3 30
LAP H22 1.745 -3.638 -0.293 ETKDGv3 31
LAP H31 4.102 -3.572 0.434 ETKDGv3 32
LAP H32 3.004 -3.261 1.796 ETKDGv3 33
LAP H41 3.457 -0.841 1.737 ETKDGv3 34
LAP H42 4.970 -1.769 1.898 ETKDGv3 35
LAP H51 5.188 0.165 0.386 ETKDGv3 36
LAP H52 3.926 -0.462 -0.711 ETKDGv3 37
LAP H61 6.624 -1.863 -0.063 ETKDGv3 38
LAP H62 5.359 -2.509 -1.145 ETKDGv3 39
LAP H71 5.556 -0.604 -2.685 ETKDGv3 40
LAP H72 7.091 -1.499 -2.504 ETKDGv3 41
LAP H81 6.408 1.230 -1.211 ETKDGv3 42
LAP H82 7.450 0.923 -2.623 ETKDGv3 43
LAP H91 7.972 -0.037 0.262 ETKDGv3 44
LAP H92 8.999 -0.484 -1.141 ETKDGv3 45
LAP H101 9.784 1.459 0.361 ETKDGv3 46
LAP H102 8.418 2.434 -0.273 ETKDGv3 47
LAP H111 9.336 2.209 -2.605 ETKDGv3 48
LAP H112 10.650 1.135 -1.995 ETKDGv3 49
LAP H121 10.190 4.079 -1.183 ETKDGv3 50
LAP H122 11.524 3.007 -0.585 ETKDGv3 51
LAP H123 11.443 3.466 -2.328 ETKDGv3 52
LAP H131 -0.287 -0.305 2.222 ETKDGv3 53
LAP H132 -0.977 -1.773 2.994 ETKDGv3 54
LAP H14 -1.579 -0.811 0.125 ETKDGv3 55
LAP H151 -2.589 0.596 1.922 ETKDGv3 56
LAP H152 -3.337 -0.893 2.656 ETKDGv3 57
LAP H161 -7.869 1.371 1.911 ETKDGv3 58
LAP H162 -7.085 2.702 0.996 ETKDGv3 59
LAP H171 -8.317 1.937 -1.091 ETKDGv3 60
LAP H172 -9.260 2.752 0.176 ETKDGv3 61
LAP H181 -11.462 0.085 -1.140 ETKDGv3 62
LAP H182 -11.231 1.859 -0.965 ETKDGv3 63
LAP H183 -10.208 0.923 -2.115 ETKDGv3 64
LAP H191 -10.863 1.591 1.516 ETKDGv3 65
LAP H192 -9.762 0.282 2.085 ETKDGv3 66
LAP H193 -11.255 -0.138 1.213 ETKDGv3 67
LAP H201 -8.413 -0.588 -1.219 ETKDGv3 68
LAP H202 -9.778 -1.451 -0.422 ETKDGv3 69
LAP H203 -8.379 -0.930 0.554 ETKDGv3 70
LAP HO3 -2.871 -2.566 0.018 ETKDGv3 71
LAP HO7 -4.371 2.525 1.142 ETKDGv3 72
#