data_LIY
#
_chem_comp.id LIY
_chem_comp.name 6-ETHYL-5-[(2S)-1-(3-METHOXYPROPYL)-2-PHENYL-1,2,3,4-TETRAHYDROQUINOLIN-7-YL]PYRIMIDINE-2,4-DIAMINE
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C25 H31 N5 O"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2006-10-04
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag ?
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 417.547
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code LIY
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 2IKU
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
LIY N1 N1 N 0 1 Y N N N N N 21.676 0.516 -53.567 -1.541 -1.313 1.828 N1 LIY 1
LIY N3 N3 N 0 1 N N N N N N 20.834 1.096 -55.678 -0.196 0.553 2.374 N3 LIY 2
LIY C4 C4 C 0 1 Y N N N N N 21.188 2.863 -53.979 -0.231 -0.257 0.107 C4 LIY 3
LIY C6 C6 C 0 1 N N N N N N 21.591 4.544 -52.045 -0.340 -1.177 -2.218 C6 LIY 4
LIY C7 C7 C 0 1 Y N N N N N 21.449 4.776 -55.623 2.066 0.521 -0.269 C7 LIY 5
LIY C8 C8 C 0 1 Y N N N N N 20.841 5.724 -56.435 2.953 1.511 -0.675 C8 LIY 6
LIY C10 C10 C 0 1 Y N N N N N 18.621 4.873 -55.715 1.093 3.025 -1.199 C10 LIY 7
LIY C13 C13 C 0 1 N N N N N N 18.789 6.808 -57.413 3.492 3.784 -1.566 C13 LIY 8
LIY C15 C15 C 0 1 N N S N N N 16.515 5.766 -56.734 1.546 5.281 -2.173 C15 LIY 9
LIY C17 C17 C 0 1 N N N N N N 16.298 4.426 -53.548 -1.413 4.930 -0.428 C17 LIY 10
LIY C20 C20 C 0 1 N N N N N N 20.450 4.636 -51.061 -1.267 -0.312 -3.065 C20 LIY 11
LIY C21 C21 C 0 1 Y N N N N N 16.244 5.041 -58.003 1.664 5.305 -3.692 C21 LIY 12
LIY C22 C22 C 0 1 Y N N N N N 14.993 5.188 -58.598 1.788 6.522 -4.356 C22 LIY 13
LIY C24 C24 C 0 1 Y N N N N N 15.631 3.691 -60.396 1.880 5.349 -6.466 C24 LIY 14
LIY C26 C26 C 0 1 Y N N N N N 17.185 4.197 -58.606 1.647 4.110 -4.405 C26 LIY 15
LIY C1 C1 C 0 1 Y N N N N N 21.229 1.451 -54.428 -0.673 -0.369 1.409 C1 LIY 16
LIY C3 C3 C 0 1 Y N N N N N 21.622 3.146 -52.601 -0.737 -1.189 -0.777 C3 LIY 17
LIY N2 N2 N 0 1 Y N N N N N 22.059 2.107 -51.851 -1.606 -2.159 -0.428 N2 LIY 18
LIY C2 C2 C 0 1 Y N N N N N 22.064 0.837 -52.312 -1.961 -2.163 0.872 C2 LIY 19
LIY N4 N4 N 0 1 N N N N N N 22.494 -0.156 -51.499 -2.871 -3.165 1.274 N4 LIY 20
LIY C12 C12 C 0 1 Y N N N N N 20.664 3.911 -54.875 0.701 0.767 -0.316 C12 LIY 21
LIY C11 C11 C 0 1 Y N N N N N 19.277 3.950 -54.921 0.225 1.999 -0.775 C11 LIY 22
LIY C9 C9 C 0 1 Y N N N N N 19.451 5.802 -56.518 2.481 2.757 -1.124 C9 LIY 23
LIY C14 C14 C 0 1 N N N N N N 17.355 7.031 -56.953 2.909 5.187 -1.476 C14 LIY 24
LIY C23 C23 C 0 1 Y N N N N N 14.688 4.520 -59.789 1.896 6.544 -5.746 C23 LIY 25
LIY C25 C25 C 0 1 Y N N N N N 16.885 3.525 -59.798 1.755 4.133 -5.796 C25 LIY 26
LIY N5 N5 N 0 1 N N N N N N 17.226 4.902 -55.794 0.621 4.249 -1.674 N5 LIY 27
LIY C16 C16 C 0 1 N N N N N N 16.339 4.019 -55.022 -0.811 4.517 -1.765 C16 LIY 28
LIY C18 C18 C 0 1 N N N N N N 15.892 3.231 -52.693 -0.794 6.208 0.128 C18 LIY 29
LIY O1 O1 O 0 1 N N N N N N 15.563 3.642 -51.372 -1.403 6.504 1.378 O1 LIY 30
LIY C19 C19 C 0 1 N N N N N N 15.094 2.553 -50.574 -0.885 7.703 1.939 C19 LIY 31
LIY HN31 1HN3 H 0 0 N N N N N N 19.838 1.009 -55.701 0.421 0.229 3.085 HN31 LIY 32
LIY HN32 2HN3 H 0 0 N N N N N N 21.122 1.797 -56.330 -0.563 1.480 2.375 HN32 LIY 33
LIY H61 1H6 H 0 1 N N N N N N 22.541 4.766 -51.538 0.693 -0.814 -2.326 H61 LIY 34
LIY H62 2H6 H 0 1 N N N N N N 21.450 5.272 -52.858 -0.334 -2.202 -2.620 H62 LIY 35
LIY H7 H7 H 0 1 N N N N N N 22.526 4.713 -55.574 2.435 -0.437 0.081 H7 LIY 36
LIY H8 H8 H 0 1 N N N N N N 21.450 6.407 -57.008 4.022 1.312 -0.639 H8 LIY 37
LIY H131 1H13 H 0 0 N N N N N N 18.788 6.434 -58.447 4.388 3.733 -0.936 H131 LIY 38
LIY H132 2H13 H 0 0 N N N N N N 19.341 7.759 -57.367 3.795 3.560 -2.595 H132 LIY 39
LIY H15 H15 H 0 1 N N N N N N 15.536 6.059 -56.328 1.124 6.261 -1.913 H15 LIY 40
LIY H171 1H17 H 0 0 N N N N N N 17.294 4.774 -53.238 -2.493 5.082 -0.548 H171 LIY 41
LIY H172 2H17 H 0 0 N N N N N N 15.564 5.234 -53.415 -1.303 4.124 0.308 H172 LIY 42
LIY H201 1H20 H 0 0 N N N N N N 20.850 4.658 -50.036 -2.299 -0.676 -3.017 H201 LIY 43
LIY H202 2H20 H 0 0 N N N N N N 19.876 5.555 -51.251 -0.953 -0.322 -4.113 H202 LIY 44
LIY H203 3H20 H 0 0 N N N N N N 19.793 3.762 -51.179 -1.261 0.727 -2.719 H203 LIY 45
LIY H22 H22 H 0 1 N N N N N N 14.252 5.823 -58.136 1.802 7.457 -3.803 H22 LIY 46
LIY H24 H24 H 0 1 N N N N N N 15.396 3.182 -61.319 1.964 5.367 -7.549 H24 LIY 47
LIY H26 H26 H 0 1 N N N N N N 18.153 4.063 -58.147 1.550 3.158 -3.891 H26 LIY 48
LIY HN41 1HN4 H 0 0 N N N N N N 22.600 -0.998 -52.028 -2.551 -3.902 1.868 HN41 LIY 49
LIY HN42 2HN4 H 0 0 N N N N N N 23.374 0.099 -51.098 -3.790 -3.172 0.883 HN42 LIY 50
LIY H11 H11 H 0 1 N N N N N N 18.704 3.251 -54.330 -0.854 2.137 -0.799 H11 LIY 51
LIY H141 1H14 H 0 0 N N N N N N 17.398 7.567 -55.993 2.781 5.449 -0.417 H141 LIY 52
LIY H142 2H14 H 0 0 N N N N N N 16.861 7.583 -57.766 3.615 5.911 -1.898 H142 LIY 53
LIY H23 H23 H 0 1 N N N N N N 13.716 4.647 -60.241 1.993 7.491 -6.268 H23 LIY 54
LIY H25 H25 H 0 1 N N N N N N 17.621 2.880 -60.255 1.742 3.202 -6.356 H25 LIY 55
LIY H161 1H16 H 0 0 N N N N N N 15.323 4.084 -55.438 -1.285 3.598 -2.122 H161 LIY 56
LIY H162 2H16 H 0 0 N N N N N N 16.725 2.991 -55.089 -0.959 5.295 -2.520 H162 LIY 57
LIY H181 1H18 H 0 0 N N N N N N 15.014 2.747 -53.147 0.282 6.091 0.288 H181 LIY 58
LIY H182 2H18 H 0 0 N N N N N N 16.738 2.529 -52.644 -0.965 7.050 -0.550 H182 LIY 59
LIY H191 1H19 H 0 0 N N N N N N 14.974 1.660 -51.205 -0.049 7.464 2.600 H191 LIY 60
LIY H192 2H19 H 0 0 N N N N N N 15.822 2.343 -49.777 -1.673 8.213 2.499 H192 LIY 61
LIY H193 3H19 H 0 0 N N N N N N 14.125 2.818 -50.126 -0.536 8.351 1.132 H193 LIY 62
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
LIY N1 C1 SING Y N 1
LIY N1 C2 DOUB Y N 2
LIY N3 C1 SING N N 3
LIY N3 HN31 SING N N 4
LIY N3 HN32 SING N N 5
LIY C4 C12 SING Y N 6
LIY C4 C1 DOUB Y N 7
LIY C4 C3 SING Y N 8
LIY C6 C3 SING N N 9
LIY C6 C20 SING N N 10
LIY C6 H61 SING N N 11
LIY C6 H62 SING N N 12
LIY C7 C8 SING Y N 13
LIY C7 C12 DOUB Y N 14
LIY C7 H7 SING N N 15
LIY C8 C9 DOUB Y N 16
LIY C8 H8 SING N N 17
LIY C10 C9 SING Y N 18
LIY C10 N5 SING N N 19
LIY C10 C11 DOUB Y N 20
LIY C13 C14 SING N N 21
LIY C13 C9 SING N N 22
LIY C13 H131 SING N N 23
LIY C13 H132 SING N N 24
LIY C15 C21 SING N N 25
LIY C15 C14 SING N N 26
LIY C15 N5 SING N N 27
LIY C15 H15 SING N N 28
LIY C17 C16 SING N N 29
LIY C17 C18 SING N N 30
LIY C17 H171 SING N N 31
LIY C17 H172 SING N N 32
LIY C20 H201 SING N N 33
LIY C20 H202 SING N N 34
LIY C20 H203 SING N N 35
LIY C21 C26 DOUB Y N 36
LIY C21 C22 SING Y N 37
LIY C22 C23 DOUB Y N 38
LIY C22 H22 SING N N 39
LIY C24 C25 DOUB Y N 40
LIY C24 C23 SING Y N 41
LIY C24 H24 SING N N 42
LIY C26 C25 SING Y N 43
LIY C26 H26 SING N N 44
LIY C3 N2 DOUB Y N 45
LIY N2 C2 SING Y N 46
LIY C2 N4 SING N N 47
LIY N4 HN41 SING N N 48
LIY N4 HN42 SING N N 49
LIY C12 C11 SING Y N 50
LIY C11 H11 SING N N 51
LIY C14 H141 SING N N 52
LIY C14 H142 SING N N 53
LIY C23 H23 SING N N 54
LIY C25 H25 SING N N 55
LIY N5 C16 SING N N 56
LIY C16 H161 SING N N 57
LIY C16 H162 SING N N 58
LIY C18 O1 SING N N 59
LIY C18 H181 SING N N 60
LIY C18 H182 SING N N 61
LIY O1 C19 SING N N 62
LIY C19 H191 SING N N 63
LIY C19 H192 SING N N 64
LIY C19 H193 SING N N 65
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
LIY SMILES ACDLabs 10.04 n4c(c(c1ccc3c(c1)N(C(c2ccccc2)CC3)CCCOC)c(nc4N)N)CC
LIY SMILES_CANONICAL CACTVS 3.341 CCc1nc(N)nc(N)c1c2ccc3CC[C@H](N(CCCOC)c3c2)c4ccccc4
LIY SMILES CACTVS 3.341 CCc1nc(N)nc(N)c1c2ccc3CC[CH](N(CCCOC)c3c2)c4ccccc4
LIY SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 CCc1c(c(nc(n1)N)N)c2ccc3c(c2)N([C@@H](CC3)c4ccccc4)CCCOC
LIY SMILES "OpenEye OEToolkits" 1.5.0 CCc1c(c(nc(n1)N)N)c2ccc3c(c2)N(C(CC3)c4ccccc4)CCCOC
LIY InChI InChI 1.03 InChI=1S/C25H31N5O/c1-3-20-23(24(26)29-25(27)28-20)19-11-10-18-12-13-21(17-8-5-4-6-9-17)30(22(18)16-19)14-7-15-31-2/h4-6,8-11,16,21H,3,7,12-15H2,1-2H3,(H4,26,27,28,29)/t21-/m0/s1
LIY InChIKey InChI 1.03 UOYVKYJWAXJTTE-NRFANRHFSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
LIY "SYSTEMATIC NAME" ACDLabs 10.04 6-ethyl-5-[(2S)-1-(3-methoxypropyl)-2-phenyl-1,2,3,4-tetrahydroquinolin-7-yl]pyrimidine-2,4-diamine
LIY "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 6-ethyl-5-[(2S)-1-(3-methoxypropyl)-2-phenyl-3,4-dihydro-2H-quinolin-7-yl]pyrimidine-2,4-diamine
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
LIY 'Create component' 2006-10-04 RCSB
LIY 'Modify aromatic_flag' 2011-06-04 RCSB
LIY 'Modify descriptor' 2011-06-04 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id LIY
_pdbe_chem_comp_drugbank_details.drugbank_id DB08099
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name
'6-ethyl-5-[(2S)-1-(3-methoxypropyl)-2-phenyl-1,2,3,4-tetrahydroquinolin-7-yl]pyrimidine-2,4-diamine'
_pdbe_chem_comp_drugbank_details.description
'6-ethyl-5-[(2s)-1-(3-methoxypropyl)-2-phenyl-1,2,3,4-tetrahydroquinolin-7-yl]pyrimidine-2,4-diamine is a solid. This compound belongs to the phenylquinolines. These are heterocyclic compounds containing a quinoline moiety substituted with a phenyl group. This substance targets the protein renin.'
_pdbe_chem_comp_drugbank_details.cas_number ?
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
_pdbe_chem_comp_drugbank_classification.comp_id LIY
_pdbe_chem_comp_drugbank_classification.drugbank_id DB08099
_pdbe_chem_comp_drugbank_classification.parent Phenylquinolines
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Quinolines and derivatives'
_pdbe_chem_comp_drugbank_classification.superclass 'Organoheterocyclic compounds'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as phenylquinolines. These are heterocyclic compounds containing a quinoline moiety substituted with a phenyl group.'
#
_pdbe_chem_comp_drugbank_targets.comp_id LIY
_pdbe_chem_comp_drugbank_targets.drugbank_id DB08099
_pdbe_chem_comp_drugbank_targets.name Renin
_pdbe_chem_comp_drugbank_targets.organism Humans
_pdbe_chem_comp_drugbank_targets.uniprot_id P00797
_pdbe_chem_comp_drugbank_targets.pharmacologically_active unknown
_pdbe_chem_comp_drugbank_targets.ordinal 1
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
LIY N1 N 5.098 1.428 1
LIY N3 N 6.388 3.683 2
LIY C4 C 7.696 1.438 3
LIY C6 C 9.003 -0.807 4
LIY C7 C 8.992 3.755 5
LIY C8 C 10.351 4.526 6
LIY C10 C 11.692 2.224 7
LIY C13 C 12.991 4.474 8
LIY C15 C 14.290 2.224 9
LIY C17 C 11.692 -0.776 10
LIY C20 C 9.009 -2.307 11
LIY C21 C 15.589 1.474 12
LIY C22 C 16.888 2.224 13
LIY C24 C 18.187 -0.026 14
LIY C26 C 15.589 -0.026 15
LIY C1 C 6.394 2.183 16
LIY C3 C 7.701 -0.062 17
LIY N2 N 6.405 -0.817 18
LIY C2 C 5.103 -0.072 19
LIY N4 N 3.807 -0.827 20
LIY C12 C 8.992 2.193 21
LIY C11 C 10.351 1.422 22
LIY C9 C 11.692 3.724 23
LIY C14 C 14.290 3.724 24
LIY C23 C 18.187 1.474 25
LIY C25 C 16.888 -0.776 26
LIY N5 N 12.991 1.474 27
LIY C16 C 12.991 -0.026 28
LIY C18 C 11.692 -2.276 29
LIY O1 O 12.991 -3.026 30
LIY C19 C 12.991 -4.526 31
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
LIY N1 C1 DOUBLE NONE 1
LIY N1 C2 SINGLE NONE 2
LIY N3 C1 SINGLE NONE 3
LIY C4 C12 SINGLE NONE 4
LIY C4 C1 SINGLE NONE 5
LIY C4 C3 DOUBLE NONE 6
LIY C6 C3 SINGLE NONE 7
LIY C6 C20 SINGLE NONE 8
LIY C7 C8 DOUBLE NONE 9
LIY C7 C12 SINGLE NONE 10
LIY C8 C9 SINGLE NONE 11
LIY C10 C9 DOUBLE NONE 12
LIY C10 N5 SINGLE NONE 13
LIY C10 C11 SINGLE NONE 14
LIY C13 C14 SINGLE NONE 15
LIY C13 C9 SINGLE NONE 16
LIY C15 C21 SINGLE BEGINWEDGE 17
LIY C15 C14 SINGLE NONE 18
LIY C15 N5 SINGLE NONE 19
LIY C17 C16 SINGLE NONE 20
LIY C17 C18 SINGLE NONE 21
LIY C21 C26 SINGLE NONE 22
LIY C21 C22 DOUBLE NONE 23
LIY C22 C23 SINGLE NONE 24
LIY C24 C25 SINGLE NONE 25
LIY C24 C23 DOUBLE NONE 26
LIY C26 C25 DOUBLE NONE 27
LIY C3 N2 SINGLE NONE 28
LIY N2 C2 DOUBLE NONE 29
LIY C2 N4 SINGLE NONE 30
LIY C12 C11 DOUBLE NONE 31
LIY N5 C16 SINGLE NONE 32
LIY C18 O1 SINGLE NONE 33
LIY O1 C19 SINGLE NONE 34
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
LIY MurckoScaffold S1 scaffold 'c1ccc([C@@H]2CCc3ccc(-c4cncnc4)cc3N2)cc1' InChI=1S/C19H17N3/c1-2-4-14(5-3-1)18-9-8-15-6-7-16(10-19(15)22-18)17-11-20-13-21-12-17/h1-7,10-13,18,22H,8-9H2/t18-/m0/s1 QXUZDDPEQRGKBD-SFHVURJKSA-N
LIY phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
LIY pyrimidine F2 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
LIY N1 S1 1
LIY C4 S1 1
LIY C7 S1 1
LIY C8 S1 1
LIY C10 S1 1
LIY C13 S1 1
LIY C15 S1 1
LIY C21 S1 1
LIY C22 S1 1
LIY C24 S1 1
LIY C26 S1 1
LIY C1 S1 1
LIY C3 S1 1
LIY N2 S1 1
LIY C2 S1 1
LIY C12 S1 1
LIY C11 S1 1
LIY C9 S1 1
LIY C14 S1 1
LIY C23 S1 1
LIY C25 S1 1
LIY N5 S1 1
LIY C7 F1 1
LIY C8 F1 1
LIY C9 F1 1
LIY C10 F1 1
LIY C11 F1 1
LIY C12 F1 1
LIY C21 F1 2
LIY C26 F1 2
LIY C25 F1 2
LIY C24 F1 2
LIY C23 F1 2
LIY C22 F1 2
LIY C4 F2 1
LIY C1 F2 1
LIY N1 F2 1
LIY C2 F2 1
LIY N2 F2 1
LIY C3 F2 1
#
_pdbe_chem_comp_rdkit_properties.comp_id LIY
_pdbe_chem_comp_rdkit_properties.exactmw 417.253
_pdbe_chem_comp_rdkit_properties.amw 417.557
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 6
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 4
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 11
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 6
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 31
_pdbe_chem_comp_rdkit_properties.NumAtoms 62
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 6
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.360
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 227.603
_pdbe_chem_comp_rdkit_properties.tpsa 90.290
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.715
_pdbe_chem_comp_rdkit_properties.CrippenMR 122.422
_pdbe_chem_comp_rdkit_properties.chi0v 15.144
_pdbe_chem_comp_rdkit_properties.chi1v 8.171
_pdbe_chem_comp_rdkit_properties.chi2v 3.799
_pdbe_chem_comp_rdkit_properties.chi3v 3.799
_pdbe_chem_comp_rdkit_properties.chi4v 2.586
_pdbe_chem_comp_rdkit_properties.chi0n 46.144
_pdbe_chem_comp_rdkit_properties.chi1n 23.460
_pdbe_chem_comp_rdkit_properties.chi2n 3.799
_pdbe_chem_comp_rdkit_properties.chi3n 3.799
_pdbe_chem_comp_rdkit_properties.chi4n 2.586
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.120
_pdbe_chem_comp_rdkit_properties.kappa1 5.261
_pdbe_chem_comp_rdkit_properties.kappa2 9.350
_pdbe_chem_comp_rdkit_properties.kappa3 4.345
_pdbe_chem_comp_rdkit_properties.Phi 1.587
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
LIY UniChem DrugBank DB08099
LIY UniChem PDBe LIY
LIY UniChem ZINC ZINC000014966595
LIY UniChem PubChem 11963546
LIY UniChem 'Probes And Drugs' PD004747
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
LIY N1 3.741 3.259 1.627 ETKDGv3 1
LIY N3 1.849 2.369 2.711 ETKDGv3 2
LIY C4 2.992 1.114 0.814 ETKDGv3 3
LIY C6 4.225 -0.037 -1.054 ETKDGv3 4
LIY C7 2.205 -0.971 2.057 ETKDGv3 5
LIY C8 1.347 -1.982 2.197 ETKDGv3 6
LIY C10 0.031 -1.258 0.245 ETKDGv3 7
LIY C13 -0.733 -3.293 1.481 ETKDGv3 8
LIY C15 -2.069 -2.499 -0.511 ETKDGv3 9
LIY C17 -1.920 0.864 -1.268 ETKDGv3 10
LIY C20 5.098 -1.103 -0.399 ETKDGv3 11
LIY C21 -3.322 -2.029 0.209 ETKDGv3 12
LIY C22 -4.520 -2.553 -0.118 ETKDGv3 13
LIY C24 -5.671 -1.223 1.574 ETKDGv3 14
LIY C26 -3.253 -1.035 1.317 ETKDGv3 15
LIY C1 2.885 2.285 1.729 ETKDGv3 16
LIY C3 3.981 1.115 -0.111 ETKDGv3 17
LIY N2 4.896 2.223 -0.161 ETKDGv3 18
LIY C2 4.790 3.233 0.651 ETKDGv3 19
LIY N4 5.716 4.314 0.570 ETKDGv3 20
LIY C12 2.043 -0.012 0.949 ETKDGv3 21
LIY C11 1.013 -0.141 0.099 ETKDGv3 22
LIY C9 0.222 -2.154 1.247 ETKDGv3 23
LIY C14 -1.434 -3.707 0.192 ETKDGv3 24
LIY C23 -5.745 -2.126 0.590 ETKDGv3 25
LIY C25 -4.365 -0.654 1.956 ETKDGv3 26
LIY N5 -1.095 -1.398 -0.669 ETKDGv3 27
LIY C16 -1.308 -0.449 -1.777 ETKDGv3 28
LIY C18 -1.923 1.934 -2.359 ETKDGv3 29
LIY O1 -2.521 3.107 -1.849 ETKDGv3 30
LIY C19 -2.521 4.102 -2.848 ETKDGv3 31
LIY HN31 1.797 3.195 3.348 ETKDGv3 32
LIY HN32 1.117 1.631 2.803 ETKDGv3 33
LIY H61 3.273 -0.491 -1.399 ETKDGv3 34
LIY H62 4.746 0.341 -1.961 ETKDGv3 35
LIY H7 3.023 -0.857 2.758 ETKDGv3 36
LIY H8 1.476 -2.680 3.016 ETKDGv3 37
LIY H131 -1.481 -2.994 2.246 ETKDGv3 38
LIY H132 -0.181 -4.172 1.878 ETKDGv3 39
LIY H15 -2.358 -2.861 -1.524 ETKDGv3 40
LIY H171 -2.967 0.676 -0.946 ETKDGv3 41
LIY H172 -1.357 1.245 -0.390 ETKDGv3 42
LIY H201 6.071 -0.666 -0.088 ETKDGv3 43
LIY H202 5.292 -1.921 -1.124 ETKDGv3 44
LIY H203 4.589 -1.532 0.489 ETKDGv3 45
LIY H22 -4.605 -3.295 -0.902 ETKDGv3 46
LIY H24 -6.568 -0.911 2.094 ETKDGv3 47
LIY H26 -2.306 -0.605 1.613 ETKDGv3 48
LIY HN41 6.484 4.305 -0.138 ETKDGv3 49
LIY HN42 5.633 5.126 1.221 ETKDGv3 50
LIY H11 0.908 0.589 -0.692 ETKDGv3 51
LIY H141 -2.206 -4.476 0.414 ETKDGv3 52
LIY H142 -0.687 -4.169 -0.490 ETKDGv3 53
LIY H23 -6.702 -2.548 0.311 ETKDGv3 54
LIY H25 -4.309 0.072 2.757 ETKDGv3 55
LIY H161 -2.000 -0.878 -2.534 ETKDGv3 56
LIY H162 -0.352 -0.274 -2.315 ETKDGv3 57
LIY H181 -2.499 1.550 -3.233 ETKDGv3 58
LIY H182 -0.870 2.132 -2.663 ETKDGv3 59
LIY H191 -2.995 5.017 -2.435 ETKDGv3 60
LIY H192 -1.484 4.369 -3.151 ETKDGv3 61
LIY H193 -3.116 3.786 -3.733 ETKDGv3 62
#