data_LJH
#
_chem_comp.id LJH
_chem_comp.name "N,N'-(iminodiethane-2,1-diyl)bis(4-amino-N-benzylbenzenesulfonamide)"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C30 H35 N5 O4 S2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2007-11-29
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 593.760
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code LJH
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 3BGC
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
LJH N1 N1 N 0 1 N N N N N N -13.382 18.901 -17.850 0.020 0.900 -0.766 N1 LJH 1
LJH C5 C5 C 0 1 N N N N N N -14.252 19.947 -18.459 -1.278 0.524 -0.189 C5 LJH 2
LJH C6 C6 C 0 1 N N N N N N -14.845 20.959 -17.468 -2.369 1.437 -0.751 C6 LJH 3
LJH C8 C8 C 0 1 N N N N N N -8.743 18.939 -17.989 3.773 -1.684 -0.985 C8 LJH 4
LJH C10 C10 C 0 1 Y N N N N N -8.493 18.597 -20.497 1.682 -3.057 -1.051 C10 LJH 5
LJH C13 C13 C 0 1 Y N N N N N -9.820 20.990 -21.035 2.358 -4.326 1.310 C13 LJH 6
LJH C17 C17 C 0 1 Y N N N N N -8.150 17.264 -15.042 5.452 2.480 0.108 C17 LJH 7
LJH C28 C28 C 0 1 Y N N N N N -16.135 20.406 -13.247 -6.669 4.282 0.530 C28 LJH 8
LJH C2 C2 C 0 1 N N N N N N -12.164 18.673 -18.678 1.094 0.043 -0.248 C2 LJH 9
LJH C3 C3 C 0 1 N N N N N N -11.085 17.859 -17.909 2.427 0.464 -0.870 C3 LJH 10
LJH N4 N4 N 0 1 N N N N N N -9.989 18.615 -17.304 3.499 -0.391 -0.354 N4 LJH 11
LJH C27 C27 C 0 1 Y N N N N N -15.727 21.215 -14.307 -6.079 3.045 0.712 C27 LJH 12
LJH C31 C31 C 0 1 Y N N N N N -13.487 21.208 -13.432 -3.942 4.098 0.947 C31 LJH 13
LJH C30 C30 C 0 1 Y N N N N N -13.901 20.454 -12.335 -4.532 5.335 0.763 C30 LJH 14
LJH C29 C29 C 0 1 Y N N N N N -15.250 20.108 -12.204 -5.895 5.427 0.554 C29 LJH 15
LJH C25 C25 C 0 1 N N N N N N -13.874 22.458 -15.585 -4.073 1.605 1.122 C25 LJH 16
LJH N7 N7 N 0 1 N N N N N N -13.959 21.991 -16.963 -3.664 1.062 -0.176 N7 LJH 17
LJH C18 C18 C 0 1 Y N N N N N -7.720 16.060 -14.459 6.458 3.290 -0.380 C18 LJH 18
LJH C16 C16 C 0 1 Y N N N N N -9.510 17.576 -14.980 5.688 1.134 0.323 C16 LJH 19
LJH C14 C14 C 0 1 Y N N N N N -9.587 20.595 -19.715 3.197 -3.366 0.777 C14 LJH 20
LJH C9 C9 C 0 1 Y N N N N N -8.950 19.384 -19.438 2.859 -2.731 -0.404 C9 LJH 21
LJH C11 C11 C 0 1 Y N N N N N -8.690 19.004 -21.813 0.843 -4.018 -0.518 C11 LJH 22
LJH S15 S15 S 0 1 N N N N N N -10.104 19.101 -15.712 4.400 0.104 0.944 S15 LJH 23
LJH O24 O24 O 0 1 N N N N N N -9.137 20.134 -15.455 3.557 0.942 1.723 O24 LJH 24
LJH O23 O23 O 0 1 N N N N N N -11.496 19.225 -15.401 5.032 -1.059 1.462 O23 LJH 25
LJH C21 C21 C 0 1 Y N N N N N -10.461 16.756 -14.365 6.932 0.595 0.051 C21 LJH 26
LJH C20 C20 C 0 1 Y N N N N N -10.018 15.574 -13.770 7.943 1.400 -0.437 C20 LJH 27
LJH C19 C19 C 0 1 Y N N N N N -8.673 15.217 -13.863 7.709 2.752 -0.655 C19 LJH 28
LJH N22 N22 N 0 1 N N N N N N -8.286 13.991 -13.291 8.730 3.568 -1.147 N22 LJH 29
LJH C12 C12 C 0 1 Y N N N N N -9.317 20.221 -22.085 1.181 -4.652 0.663 C12 LJH 30
LJH S32 S32 S 0 1 N N N N N N -12.950 22.754 -18.035 -4.663 0.024 -0.992 S32 LJH 31
LJH O41 O41 O 0 1 N N N N N N -12.145 21.767 -18.719 -5.978 0.278 -0.519 O41 LJH 32
LJH O40 O40 O 0 1 N N N N N N -12.301 23.786 -17.252 -4.300 0.112 -2.363 O40 LJH 33
LJH C33 C33 C 0 1 Y N N N N N -14.064 23.505 -19.197 -4.254 -1.610 -0.474 C33 LJH 34
LJH C38 C38 C 0 1 Y N N N N N -14.873 24.573 -18.790 -4.899 -2.170 0.614 C38 LJH 35
LJH C37 C37 C 0 1 Y N N N N N -15.750 25.162 -19.701 -4.581 -3.450 1.023 C37 LJH 36
LJH C36 C36 C 0 1 Y N N N N N -15.824 24.696 -21.015 -3.612 -4.175 0.341 C36 LJH 37
LJH N39 N39 N 0 1 N N N N N N -16.748 25.298 -21.897 -3.288 -5.470 0.752 N39 LJH 38
LJH C35 C35 C 0 1 Y N N N N N -15.005 23.643 -21.425 -2.967 -3.609 -0.752 C35 LJH 39
LJH C34 C34 C 0 1 Y N N N N N -14.121 23.048 -20.514 -3.293 -2.331 -1.159 C34 LJH 40
LJH C26 C26 C 0 1 Y N N N N N -14.389 21.618 -14.427 -4.716 2.953 0.921 C26 LJH 41
LJH HN1 HN1 H 0 1 N N N N N N -13.104 19.200 -16.937 -0.011 0.872 -1.774 HN1 LJH 42
LJH H5 H5 H 0 1 N N N N N N -13.642 20.508 -19.183 -1.503 -0.511 -0.445 H5 LJH 43
LJH H5A H5A H 0 1 N N N N N N -15.105 19.417 -18.908 -1.238 0.630 0.895 H5A LJH 44
LJH H6 H6 H 0 1 N N N N N N -15.670 21.470 -17.986 -2.145 2.472 -0.495 H6 LJH 45
LJH H6A H6A H 0 1 N N N N N N -15.128 20.366 -16.586 -2.409 1.331 -1.835 H6A LJH 46
LJH H8 H8 H 0 1 N N N N N N -8.253 19.759 -17.443 3.602 -1.608 -2.059 H8 LJH 47
LJH H8A H8A H 0 1 N N N N N N -8.132 18.025 -18.010 4.810 -1.965 -0.802 H8A LJH 48
LJH H10 H10 H 0 1 N N N N N N -7.984 17.667 -20.293 1.416 -2.559 -1.972 H10 LJH 49
LJH H13 H13 H 0 1 N N N N N N -10.387 21.886 -21.241 2.622 -4.822 2.233 H13 LJH 50
LJH H17 H17 H 0 1 N N N N N N -7.449 17.929 -15.524 4.480 2.898 0.326 H17 LJH 51
LJH H28 H28 H 0 1 N N N N N N -17.139 20.007 -13.231 -7.734 4.353 0.362 H28 LJH 52
LJH H2 H2 H 0 1 N N N N N N -12.451 18.113 -19.580 1.151 0.146 0.836 H2 LJH 53
LJH H2A H2A H 0 1 N N N N N N -11.736 19.653 -18.934 0.886 -0.996 -0.504 H2A LJH 54
LJH H3 H3 H 0 1 N N N N N N -11.600 17.330 -17.094 2.371 0.361 -1.954 H3 LJH 55
LJH H3A H3A H 0 1 N N N N N N -10.611 17.217 -18.666 2.636 1.503 -0.614 H3A LJH 56
LJH H27 H27 H 0 1 N N N N N N -16.449 21.535 -15.044 -6.684 2.150 0.692 H27 LJH 57
LJH H31 H31 H 0 1 N N N N N N -12.446 21.484 -13.519 -2.877 4.027 1.110 H31 LJH 58
LJH H30 H30 H 0 1 N N N N N N -13.185 20.139 -11.591 -3.927 6.230 0.784 H30 LJH 59
LJH H29 H29 H 0 1 N N N N N N -15.604 19.617 -11.310 -6.356 6.393 0.411 H29 LJH 60
LJH H25 H25 H 0 1 N N N N N N -12.802 22.608 -15.389 -4.788 0.928 1.589 H25 LJH 61
LJH H25A H25A H 0 0 N N N N N N -14.553 23.324 -15.579 -3.199 1.711 1.764 H25A LJH 62
LJH H18 H18 H 0 1 N N N N N N -6.675 15.787 -14.469 6.273 4.340 -0.548 H18 LJH 63
LJH H14 H14 H 0 1 N N N N N N -9.902 21.232 -18.902 4.116 -3.111 1.283 H14 LJH 64
LJH H11 H11 H 0 1 N N N N N N -8.357 18.376 -22.626 -0.077 -4.273 -1.024 H11 LJH 65
LJH H21 H21 H 0 1 N N N N N N -11.506 17.029 -14.351 7.113 -0.456 0.220 H21 LJH 66
LJH H20 H20 H 0 1 N N N N N N -10.713 14.939 -13.240 8.914 0.978 -0.649 H20 LJH 67
LJH HN22 HN22 H 0 0 N N N N N N -8.194 13.302 -14.010 8.565 4.512 -1.298 HN22 LJH 68
LJH HN2A HN2A H 0 0 N N N N N N -7.409 14.104 -12.823 9.603 3.191 -1.339 HN2A LJH 69
LJH H12 H12 H 0 1 N N N N N N -9.412 20.566 -23.104 0.525 -5.402 1.079 H12 LJH 70
LJH H38 H38 H 0 1 N N N N N N -14.818 24.939 -17.775 -5.652 -1.606 1.144 H38 LJH 71
LJH H37 H37 H 0 1 N N N N N N -16.376 25.984 -19.388 -5.084 -3.887 1.873 H37 LJH 72
LJH HN39 HN39 H 0 0 N N N N N N -17.617 25.440 -21.424 -3.740 -5.864 1.514 HN39 LJH 73
LJH HN3A HN3A H 0 0 N N N N N N -16.389 26.179 -22.206 -2.612 -5.975 0.274 HN3A LJH 74
LJH H35 H35 H 0 1 N N N N N N -15.052 23.287 -22.443 -2.213 -4.170 -1.284 H35 LJH 75
LJH H34 H34 H 0 1 N N N N N N -13.484 22.236 -20.832 -2.795 -1.892 -2.010 H34 LJH 76
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
LJH N1 C5 SING N N 1
LJH N1 C2 SING N N 2
LJH C5 C6 SING N N 3
LJH C6 N7 SING N N 4
LJH C8 N4 SING N N 5
LJH C8 C9 SING N N 6
LJH C10 C9 DOUB Y N 7
LJH C10 C11 SING Y N 8
LJH C13 C14 DOUB Y N 9
LJH C13 C12 SING Y N 10
LJH C17 C18 DOUB Y N 11
LJH C17 C16 SING Y N 12
LJH C28 C27 DOUB Y N 13
LJH C28 C29 SING Y N 14
LJH C2 C3 SING N N 15
LJH C3 N4 SING N N 16
LJH N4 S15 SING N N 17
LJH C27 C26 SING Y N 18
LJH C31 C30 SING Y N 19
LJH C31 C26 DOUB Y N 20
LJH C30 C29 DOUB Y N 21
LJH C25 N7 SING N N 22
LJH C25 C26 SING N N 23
LJH N7 S32 SING N N 24
LJH C18 C19 SING Y N 25
LJH C16 S15 SING N N 26
LJH C16 C21 DOUB Y N 27
LJH C14 C9 SING Y N 28
LJH C11 C12 DOUB Y N 29
LJH S15 O24 DOUB N N 30
LJH S15 O23 DOUB N N 31
LJH C21 C20 SING Y N 32
LJH C20 C19 DOUB Y N 33
LJH C19 N22 SING N N 34
LJH S32 O41 DOUB N N 35
LJH S32 O40 DOUB N N 36
LJH S32 C33 SING N N 37
LJH C33 C38 DOUB Y N 38
LJH C33 C34 SING Y N 39
LJH C38 C37 SING Y N 40
LJH C37 C36 DOUB Y N 41
LJH C36 N39 SING N N 42
LJH C36 C35 SING Y N 43
LJH C35 C34 DOUB Y N 44
LJH N1 HN1 SING N N 45
LJH C5 H5 SING N N 46
LJH C5 H5A SING N N 47
LJH C6 H6 SING N N 48
LJH C6 H6A SING N N 49
LJH C8 H8 SING N N 50
LJH C8 H8A SING N N 51
LJH C10 H10 SING N N 52
LJH C13 H13 SING N N 53
LJH C17 H17 SING N N 54
LJH C28 H28 SING N N 55
LJH C2 H2 SING N N 56
LJH C2 H2A SING N N 57
LJH C3 H3 SING N N 58
LJH C3 H3A SING N N 59
LJH C27 H27 SING N N 60
LJH C31 H31 SING N N 61
LJH C30 H30 SING N N 62
LJH C29 H29 SING N N 63
LJH C25 H25 SING N N 64
LJH C25 H25A SING N N 65
LJH C18 H18 SING N N 66
LJH C14 H14 SING N N 67
LJH C11 H11 SING N N 68
LJH C21 H21 SING N N 69
LJH C20 H20 SING N N 70
LJH N22 HN22 SING N N 71
LJH N22 HN2A SING N N 72
LJH C12 H12 SING N N 73
LJH C38 H38 SING N N 74
LJH C37 H37 SING N N 75
LJH N39 HN39 SING N N 76
LJH N39 HN3A SING N N 77
LJH C35 H35 SING N N 78
LJH C34 H34 SING N N 79
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
LJH SMILES ACDLabs 10.04 O=S(=O)(c1ccc(N)cc1)N(Cc2ccccc2)CCNCCN(Cc3ccccc3)S(=O)(=O)c4ccc(N)cc4
LJH SMILES_CANONICAL CACTVS 3.341 Nc1ccc(cc1)[S](=O)(=O)N(CCNCCN(Cc2ccccc2)[S](=O)(=O)c3ccc(N)cc3)Cc4ccccc4
LJH SMILES CACTVS 3.341 Nc1ccc(cc1)[S](=O)(=O)N(CCNCCN(Cc2ccccc2)[S](=O)(=O)c3ccc(N)cc3)Cc4ccccc4
LJH SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 c1ccc(cc1)CN(CCNCCN(Cc2ccccc2)S(=O)(=O)c3ccc(cc3)N)S(=O)(=O)c4ccc(cc4)N
LJH SMILES "OpenEye OEToolkits" 1.5.0 c1ccc(cc1)CN(CCNCCN(Cc2ccccc2)S(=O)(=O)c3ccc(cc3)N)S(=O)(=O)c4ccc(cc4)N
LJH InChI InChI 1.03 InChI=1S/C30H35N5O4S2/c31-27-11-15-29(16-12-27)40(36,37)34(23-25-7-3-1-4-8-25)21-19-33-20-22-35(24-26-9-5-2-6-10-26)41(38,39)30-17-13-28(32)14-18-30/h1-18,33H,19-24,31-32H2
LJH InChIKey InChI 1.03 LGNWJMPLPCSVBL-UHFFFAOYSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
LJH "SYSTEMATIC NAME" ACDLabs 10.04 "N,N'-(iminodiethane-2,1-diyl)bis(4-amino-N-benzylbenzenesulfonamide)"
LJH "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 4-amino-N-[2-[2-[(4-aminophenyl)sulfonyl-(phenylmethyl)amino]ethylamino]ethyl]-N-(phenylmethyl)benzenesulfonamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
LJH 'Create component' 2007-11-29 PDBJ
LJH 'Modify aromatic_flag' 2011-06-04 RCSB
LJH 'Modify descriptor' 2011-06-04 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
LJH N1 N 14.198 2.107 1
LJH C5 C 12.899 1.357 2
LJH C6 C 11.600 2.107 3
LJH C8 C 19.394 2.107 4
LJH C10 C 20.693 4.357 5
LJH C13 C 18.095 5.857 6
LJH C17 C 16.796 -2.393 7
LJH C28 C 14.198 -0.892 8
LJH C2 C 15.497 1.357 9
LJH C3 C 16.796 2.107 10
LJH N4 N 18.095 1.357 11
LJH C27 C 12.899 -0.142 12
LJH C31 C 11.600 -2.393 13
LJH C30 C 12.899 -3.143 14
LJH C29 C 14.198 -2.393 15
LJH C25 C 10.301 -0.142 16
LJH N7 N 10.301 1.357 17
LJH C18 C 16.796 -3.893 18
LJH C16 C 18.095 -1.643 19
LJH C14 C 18.095 4.357 20
LJH C9 C 19.394 3.607 21
LJH C11 C 20.693 5.857 22
LJH S15 S 18.095 -0.142 23
LJH O24 O 19.595 -0.142 24
LJH O23 O 16.595 -0.142 25
LJH C21 C 19.394 -2.393 26
LJH C20 C 19.394 -3.893 27
LJH C19 C 18.095 -4.643 28
LJH N22 N 18.095 -6.143 29
LJH C12 C 19.394 6.607 30
LJH S32 S 9.002 2.107 31
LJH O41 O 8.252 0.808 32
LJH O40 O 9.752 3.406 33
LJH C33 C 7.702 2.857 34
LJH C38 C 7.702 4.357 35
LJH C37 C 6.404 5.107 36
LJH C36 C 5.104 4.357 37
LJH N39 N 3.805 5.107 38
LJH C35 C 5.104 2.857 39
LJH C34 C 6.404 2.107 40
LJH C26 C 11.600 -0.892 41
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
LJH N1 C5 SINGLE NONE 1
LJH N1 C2 SINGLE NONE 2
LJH C5 C6 SINGLE NONE 3
LJH C6 N7 SINGLE NONE 4
LJH C8 N4 SINGLE NONE 5
LJH C8 C9 SINGLE NONE 6
LJH C10 C9 DOUBLE NONE 7
LJH C10 C11 SINGLE NONE 8
LJH C13 C14 DOUBLE NONE 9
LJH C13 C12 SINGLE NONE 10
LJH C17 C18 DOUBLE NONE 11
LJH C17 C16 SINGLE NONE 12
LJH C28 C27 DOUBLE NONE 13
LJH C28 C29 SINGLE NONE 14
LJH C2 C3 SINGLE NONE 15
LJH C3 N4 SINGLE NONE 16
LJH N4 S15 SINGLE NONE 17
LJH C27 C26 SINGLE NONE 18
LJH C31 C30 SINGLE NONE 19
LJH C31 C26 DOUBLE NONE 20
LJH C30 C29 DOUBLE NONE 21
LJH C25 N7 SINGLE NONE 22
LJH C25 C26 SINGLE NONE 23
LJH N7 S32 SINGLE NONE 24
LJH C18 C19 SINGLE NONE 25
LJH C16 S15 SINGLE NONE 26
LJH C16 C21 DOUBLE NONE 27
LJH C14 C9 SINGLE NONE 28
LJH C11 C12 DOUBLE NONE 29
LJH S15 O24 DOUBLE NONE 30
LJH S15 O23 DOUBLE NONE 31
LJH C21 C20 SINGLE NONE 32
LJH C20 C19 DOUBLE NONE 33
LJH C19 N22 SINGLE NONE 34
LJH S32 O41 DOUBLE NONE 35
LJH S32 O40 DOUBLE NONE 36
LJH S32 C33 SINGLE NONE 37
LJH C33 C38 DOUBLE NONE 38
LJH C33 C34 SINGLE NONE 39
LJH C38 C37 SINGLE NONE 40
LJH C37 C36 DOUBLE NONE 41
LJH C36 N39 SINGLE NONE 42
LJH C36 C35 SINGLE NONE 43
LJH C35 C34 DOUBLE NONE 44
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
LJH MurckoScaffold S1 scaffold O=S(=O)(c1ccccc1)N(CCNCCN(Cc1ccccc1)S(=O)(=O)c1ccccc1)Cc1ccccc1 InChI=1S/C30H33N3O4S2/c34-38(35,29-17-9-3-10-18-29)32(25-27-13-5-1-6-14-27)23-21-31-22-24-33(26-28-15-7-2-8-16-28)39(36,37)30-19-11-4-12-20-30/h1-20,31H,21-26H2 SAEHJKSEOLSBPF-UHFFFAOYSA-N
LJH phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
LJH N1 S1 1
LJH C5 S1 1
LJH C6 S1 1
LJH C8 S1 1
LJH C10 S1 1
LJH C13 S1 1
LJH C17 S1 1
LJH C28 S1 1
LJH C2 S1 1
LJH C3 S1 1
LJH N4 S1 1
LJH C27 S1 1
LJH C31 S1 1
LJH C30 S1 1
LJH C29 S1 1
LJH C25 S1 1
LJH N7 S1 1
LJH C18 S1 1
LJH C16 S1 1
LJH C14 S1 1
LJH C9 S1 1
LJH C11 S1 1
LJH S15 S1 1
LJH O24 S1 1
LJH O23 S1 1
LJH C21 S1 1
LJH C20 S1 1
LJH C19 S1 1
LJH C12 S1 1
LJH S32 S1 1
LJH O41 S1 1
LJH O40 S1 1
LJH C33 S1 1
LJH C38 S1 1
LJH C37 S1 1
LJH C36 S1 1
LJH C35 S1 1
LJH C34 S1 1
LJH C26 S1 1
LJH C10 F1 1
LJH C9 F1 1
LJH C14 F1 1
LJH C13 F1 1
LJH C12 F1 1
LJH C11 F1 1
LJH C17 F1 2
LJH C18 F1 2
LJH C19 F1 2
LJH C20 F1 2
LJH C21 F1 2
LJH C16 F1 2
LJH C28 F1 3
LJH C27 F1 3
LJH C26 F1 3
LJH C31 F1 3
LJH C30 F1 3
LJH C29 F1 3
LJH C33 F1 4
LJH C38 F1 4
LJH C37 F1 4
LJH C36 F1 4
LJH C35 F1 4
LJH C34 F1 4
#
_pdbe_chem_comp_rdkit_properties.comp_id LJH
_pdbe_chem_comp_rdkit_properties.exactmw 593.213
_pdbe_chem_comp_rdkit_properties.amw 593.775
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 9
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 5
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 16
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 41
_pdbe_chem_comp_rdkit_properties.NumAtoms 76
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 11
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.200
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 291.527
_pdbe_chem_comp_rdkit_properties.tpsa 138.830
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.436
_pdbe_chem_comp_rdkit_properties.CrippenMR 161.614
_pdbe_chem_comp_rdkit_properties.chi0v 21.319
_pdbe_chem_comp_rdkit_properties.chi1v 13.109
_pdbe_chem_comp_rdkit_properties.chi2v 6.783
_pdbe_chem_comp_rdkit_properties.chi3v 6.783
_pdbe_chem_comp_rdkit_properties.chi4v 4.139
_pdbe_chem_comp_rdkit_properties.chi0n 54.686
_pdbe_chem_comp_rdkit_properties.chi1n 27.465
_pdbe_chem_comp_rdkit_properties.chi2n 4.016
_pdbe_chem_comp_rdkit_properties.chi3n 4.016
_pdbe_chem_comp_rdkit_properties.chi4n 2.309
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.740
_pdbe_chem_comp_rdkit_properties.kappa1 8.649
_pdbe_chem_comp_rdkit_properties.kappa2 13.750
_pdbe_chem_comp_rdkit_properties.kappa3 8.151
_pdbe_chem_comp_rdkit_properties.Phi 2.901
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
LJH UniChem ChEMBL CHEMBL519079
LJH UniChem PDBe LJH
LJH UniChem ZINC ZINC000042878048
LJH UniChem 'PubChem TPHARMA' 56468711
LJH UniChem BindingDb 32387
LJH UniChem PubChem 24883483
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
LJH N1 -0.753 -1.130 -3.109 ETKDGv3 1
LJH C5 -2.119 -0.839 -2.641 ETKDGv3 2
LJH C6 -2.207 -0.890 -1.111 ETKDGv3 3
LJH C8 2.592 1.533 -1.517 ETKDGv3 4
LJH C10 1.478 3.738 -1.631 ETKDGv3 5
LJH C13 3.440 4.925 0.006 ETKDGv3 6
LJH C17 2.840 -2.300 0.697 ETKDGv3 7
LJH C28 -3.340 -5.196 0.458 ETKDGv3 8
LJH C2 0.185 -0.027 -2.826 ETKDGv3 9
LJH C3 1.119 -0.408 -1.666 ETKDGv3 10
LJH N4 1.481 0.792 -0.886 ETKDGv3 11
LJH C27 -3.157 -3.903 0.755 ETKDGv3 12
LJH C31 -5.152 -3.263 -0.503 ETKDGv3 13
LJH C30 -5.351 -4.691 -0.826 ETKDGv3 14
LJH C29 -4.491 -5.609 -0.371 ETKDGv3 15
LJH C25 -3.890 -1.423 0.571 ETKDGv3 16
LJH N7 -3.598 -0.663 -0.660 ETKDGv3 17
LJH C18 3.814 -3.217 0.718 ETKDGv3 18
LJH C16 3.169 -0.859 0.803 ETKDGv3 19
LJH C14 3.537 3.629 -0.319 ETKDGv3 20
LJH C9 2.502 2.994 -1.173 ETKDGv3 21
LJH C11 1.377 5.168 -1.273 ETKDGv3 22
LJH S15 1.878 0.342 0.760 ETKDGv3 23
LJH O24 2.298 1.556 1.540 ETKDGv3 24
LJH O23 0.657 -0.231 1.424 ETKDGv3 25
LJH C21 4.452 -0.482 0.929 ETKDGv3 26
LJH C20 5.527 -1.495 0.953 ETKDGv3 27
LJH C19 5.229 -2.800 0.852 ETKDGv3 28
LJH N22 6.265 -3.785 0.873 ETKDGv3 29
LJH C12 2.307 5.731 -0.493 ETKDGv3 30
LJH S32 -3.882 1.045 -0.377 ETKDGv3 31
LJH O41 -3.732 1.804 -1.666 ETKDGv3 32
LJH O40 -5.289 1.252 0.113 ETKDGv3 33
LJH C33 -2.755 1.703 0.813 ETKDGv3 34
LJH C38 -2.961 1.510 2.125 ETKDGv3 35
LJH C37 -1.999 2.038 3.115 ETKDGv3 36
LJH C36 -0.917 2.721 2.709 ETKDGv3 37
LJH N39 0.024 3.225 3.661 ETKDGv3 38
LJH C35 -0.697 2.947 1.263 ETKDGv3 39
LJH C34 -1.563 2.462 0.365 ETKDGv3 40
LJH C26 -4.107 -2.879 0.252 ETKDGv3 41
LJH HN1 -0.804 -1.255 -4.147 ETKDGv3 42
LJH H5 -2.463 0.141 -3.033 ETKDGv3 43
LJH H5A -2.807 -1.611 -3.050 ETKDGv3 44
LJH H6 -1.842 -1.895 -0.803 ETKDGv3 45
LJH H6A -1.515 -0.155 -0.654 ETKDGv3 46
LJH H8 2.547 1.455 -2.626 ETKDGv3 47
LJH H8A 3.578 1.113 -1.223 ETKDGv3 48
LJH H10 0.712 3.296 -2.256 ETKDGv3 49
LJH H13 4.192 5.385 0.634 ETKDGv3 50
LJH H17 1.809 -2.617 0.602 ETKDGv3 51
LJH H28 -2.645 -5.941 0.823 ETKDGv3 52
LJH H2 0.807 0.177 -3.726 ETKDGv3 53
LJH H2A -0.350 0.922 -2.595 ETKDGv3 54
LJH H3 2.026 -0.925 -2.056 ETKDGv3 55
LJH H3A 0.597 -1.144 -1.019 ETKDGv3 56
LJH H27 -2.308 -3.609 1.361 ETKDGv3 57
LJH H31 -5.854 -2.532 -0.884 ETKDGv3 58
LJH H30 -6.195 -4.992 -1.434 ETKDGv3 59
LJH H29 -4.635 -6.655 -0.608 ETKDGv3 60
LJH H25 -4.822 -1.052 1.051 ETKDGv3 61
LJH H25A -3.071 -1.299 1.315 ETKDGv3 62
LJH H18 3.565 -4.268 0.639 ETKDGv3 63
LJH H14 4.370 3.046 0.052 ETKDGv3 64
LJH H11 0.546 5.756 -1.639 ETKDGv3 65
LJH H21 4.715 0.565 1.008 ETKDGv3 66
LJH H20 6.556 -1.170 1.052 ETKDGv3 67
LJH HN22 6.032 -4.800 0.794 ETKDGv3 68
LJH HN2A 7.269 -3.511 0.966 ETKDGv3 69
LJH H12 2.233 6.777 -0.227 ETKDGv3 70
LJH H38 -3.825 0.960 2.473 ETKDGv3 71
LJH H37 -2.176 1.862 4.169 ETKDGv3 72
LJH HN39 0.868 3.750 3.342 ETKDGv3 73
LJH HN3A -0.112 3.074 4.685 ETKDGv3 74
LJH H35 0.172 3.499 0.931 ETKDGv3 75
LJH H34 -1.383 2.622 -0.690 ETKDGv3 76
#