data_LL7
#
_chem_comp.id LL7
_chem_comp.name
(2~{S})-~{N}-[3-oxidanylidene-3-[(3,4,5-trimethoxyphenyl)amino]propyl]-1-(phenylmethyl)sulfonyl-piperidine-2-carboxamide
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C25 H33 N3 O7 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2019-03-01
_chem_comp.pdbx_modified_date 2020-02-07
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 519.610
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code LL7
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6O49
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
LL7 C02 C1 C 0 1 N N N N N N -77.274 -40.697 146.110 2.635 1.669 -0.361 C02 LL7 1
LL7 C03 C2 C 0 1 N N S N N N -76.946 -39.785 144.935 3.890 2.421 -0.001 C03 LL7 2
LL7 C04 C3 C 0 1 N N N N N N -75.657 -40.262 144.224 4.477 3.073 -1.256 C04 LL7 3
LL7 C05 C4 C 0 1 N N N N N N -74.392 -39.890 145.028 5.822 3.716 -0.911 C05 LL7 4
LL7 C06 C5 C 0 1 N N N N N N -74.303 -38.366 145.176 6.795 2.639 -0.426 C06 LL7 5
LL7 C07 C6 C 0 1 N N N N N N -75.523 -37.839 145.949 6.234 1.982 0.839 C07 LL7 6
LL7 C10 C7 C 0 1 N N N N N N -78.724 -36.619 146.166 4.788 -0.943 -0.715 C10 LL7 7
LL7 C11 C8 C 0 1 Y N N N N N -79.700 -35.535 145.827 4.455 -2.405 -0.568 C11 LL7 8
LL7 C12 C9 C 0 1 Y N N N N N -79.281 -34.217 145.727 3.177 -2.853 -0.843 C12 LL7 9
LL7 C13 C10 C 0 1 Y N N N N N -80.191 -33.214 145.423 2.871 -4.195 -0.707 C13 LL7 10
LL7 C14 C11 C 0 1 Y N N N N N -81.523 -33.531 145.214 3.843 -5.087 -0.296 C14 LL7 11
LL7 C15 C12 C 0 1 Y N N N N N -81.948 -34.848 145.312 5.121 -4.638 -0.021 C15 LL7 12
LL7 C16 C13 C 0 1 Y N N N N N -81.039 -35.848 145.617 5.429 -3.298 -0.162 C16 LL7 13
LL7 C20 C14 C 0 1 N N N N N N -77.589 -40.942 148.505 0.221 1.356 -0.245 C20 LL7 14
LL7 C21 C15 C 0 1 N N N N N N -78.103 -40.094 149.694 -0.985 2.033 0.410 C21 LL7 15
LL7 C22 C16 C 0 1 N N N N N N -79.491 -39.535 149.431 -2.240 1.282 0.049 C22 LL7 16
LL7 C24 C17 C 0 1 Y N N N N N -80.646 -37.327 149.441 -4.583 0.934 0.283 C24 LL7 17
LL7 C25 C18 C 0 1 Y N N N N N -81.944 -37.778 149.239 -4.495 -0.450 0.224 C25 LL7 18
LL7 C26 C19 C 0 1 Y N N N N N -82.971 -36.871 149.098 -5.633 -1.209 -0.001 C26 LL7 19
LL7 C28 C20 C 0 1 N N N N N N -84.617 -38.643 148.848 -4.250 -3.140 0.119 C28 LL7 20
LL7 C29 C21 C 0 1 Y N N N N N -82.729 -35.506 149.150 -6.863 -0.583 -0.166 C29 LL7 21
LL7 C31 C22 C 0 1 N N N N N N -84.487 -34.261 150.224 -8.717 -1.750 0.764 C31 LL7 22
LL7 C32 C23 C 0 1 Y N N N N N -81.438 -35.069 149.348 -6.951 0.803 -0.105 C32 LL7 23
LL7 C34 C24 C 0 1 N N N N N N -79.747 -33.340 149.227 -8.170 2.843 -0.193 C34 LL7 24
LL7 C35 C25 C 0 1 Y N N N N N -80.401 -35.971 149.494 -5.812 1.559 0.119 C35 LL7 25
LL7 N08 N1 N 0 1 N N N N N N -76.793 -38.392 145.364 4.880 1.488 0.555 N08 LL7 26
LL7 N19 N2 N 0 1 N N N N N N -77.291 -40.127 147.319 1.441 2.087 0.106 N19 LL7 27
LL7 N23 N3 N 0 1 N N N N N N -79.544 -38.188 149.596 -3.433 1.699 0.516 N23 LL7 28
LL7 O01 O1 O 0 1 N N N N N N -77.486 -41.897 145.956 2.698 0.692 -1.076 O01 LL7 29
LL7 O17 O2 O 0 1 N N N N N N -78.919 -38.028 143.780 3.084 -0.049 1.133 O17 LL7 30
LL7 O18 O3 O 0 1 N N N N N N -77.078 -36.059 144.035 5.410 -0.508 1.843 O18 LL7 31
LL7 O27 O4 O 0 1 N N N N N N -84.267 -37.246 148.894 -5.546 -2.565 -0.059 O27 LL7 32
LL7 O30 O5 O 0 1 N N N N N N -83.755 -34.583 149.008 -7.982 -1.327 -0.386 O30 LL7 33
LL7 O33 O6 O 0 1 N N N N N N -81.140 -33.727 149.410 -8.154 1.416 -0.267 O33 LL7 34
LL7 O36 O7 O 0 1 N N N N N N -80.417 -40.255 149.095 -2.177 0.301 -0.662 O36 LL7 35
LL7 S09 S1 S 0 1 N N N N N N -77.875 -37.254 144.658 4.477 -0.090 0.855 S09 LL7 36
LL7 H1 H1 H 0 1 N N N N N N -77.773 -39.846 144.212 3.657 3.189 0.737 H1 LL7 37
LL7 H2 H2 H 0 1 N N N N N N -75.697 -41.355 144.108 4.623 2.314 -2.025 H2 LL7 38
LL7 H3 H3 H 0 1 N N N N N N -75.601 -39.790 143.232 3.792 3.837 -1.624 H3 LL7 39
LL7 H4 H4 H 0 1 N N N N N N -74.444 -40.352 146.025 6.231 4.202 -1.797 H4 LL7 40
LL7 H5 H5 H 0 1 N N N N N N -73.501 -40.259 144.499 5.679 4.457 -0.124 H5 LL7 41
LL7 H6 H6 H 0 1 N N N N N N -73.385 -38.106 145.724 6.920 1.885 -1.203 H6 LL7 42
LL7 H7 H7 H 0 1 N N N N N N -74.277 -37.904 144.178 7.760 3.094 -0.202 H7 LL7 43
LL7 H8 H8 H 0 1 N N N N N N -75.445 -38.146 147.002 6.873 1.149 1.133 H8 LL7 44
LL7 H9 H9 H 0 1 N N N N N N -75.544 -36.741 145.888 6.197 2.715 1.645 H9 LL7 45
LL7 H10 H10 H 0 1 N N N N N N -79.263 -37.447 146.649 5.839 -0.835 -0.985 H10 LL7 46
LL7 H11 H11 H 0 1 N N N N N N -77.970 -36.218 146.859 4.166 -0.505 -1.496 H11 LL7 47
LL7 H12 H12 H 0 1 N N N N N N -78.242 -33.970 145.886 2.417 -2.156 -1.165 H12 LL7 48
LL7 H13 H13 H 0 1 N N N N N N -79.861 -32.188 145.350 1.872 -4.545 -0.923 H13 LL7 49
LL7 H14 H14 H 0 1 N N N N N N -82.232 -32.752 144.974 3.603 -6.134 -0.185 H14 LL7 50
LL7 H15 H15 H 0 1 N N N N N N -82.987 -35.094 145.151 5.881 -5.336 0.301 H15 LL7 51
LL7 H16 H16 H 0 1 N N N N N N -81.371 -36.873 145.692 6.427 -2.948 0.053 H16 LL7 52
LL7 H17 H17 H 0 1 N N N N N N -78.359 -41.681 148.240 0.298 0.329 0.111 H17 LL7 53
LL7 H18 H18 H 0 1 N N N N N N -76.671 -41.463 148.814 0.095 1.358 -1.328 H18 LL7 54
LL7 H19 H19 H 0 1 N N N N N N -78.139 -40.727 150.593 -0.859 2.032 1.492 H19 LL7 55
LL7 H20 H20 H 0 1 N N N N N N -77.408 -39.258 149.861 -1.062 3.061 0.054 H20 LL7 56
LL7 H21 H21 H 0 1 N N N N N N -82.148 -38.838 149.193 -3.539 -0.936 0.352 H21 LL7 57
LL7 H22 H22 H 0 1 N N N N N N -85.699 -38.745 148.676 -3.862 -2.864 1.099 H22 LL7 58
LL7 H23 H23 H 0 1 N N N N N N -84.068 -39.132 148.029 -4.322 -4.225 0.049 H23 LL7 59
LL7 H24 H24 H 0 1 N N N N N N -84.351 -39.119 149.803 -3.579 -2.769 -0.655 H24 LL7 60
LL7 H25 H25 H 0 1 N N N N N N -85.272 -33.525 149.996 -9.583 -2.333 0.448 H25 LL7 61
LL7 H26 H26 H 0 1 N N N N N N -84.948 -35.175 150.627 -8.078 -2.363 1.399 H26 LL7 62
LL7 H27 H27 H 0 1 N N N N N N -83.795 -33.840 150.968 -9.053 -0.875 1.322 H27 LL7 63
LL7 H28 H28 H 0 1 N N N N N N -79.657 -32.246 149.301 -9.188 3.203 -0.339 H28 LL7 64
LL7 H29 H29 H 0 1 N N N N N N -79.130 -33.812 150.006 -7.808 3.160 0.785 H29 LL7 65
LL7 H30 H30 H 0 1 N N N N N N -79.402 -33.670 148.236 -7.525 3.254 -0.970 H30 LL7 66
LL7 H31 H31 H 0 1 N N N N N N -79.394 -35.612 149.650 -5.880 2.636 0.170 H31 LL7 67
LL7 H32 H32 H 0 1 N N N N N N -77.102 -39.150 147.416 1.391 2.871 0.674 H32 LL7 68
LL7 H33 H33 H 0 1 N N N N N N -78.686 -37.750 149.863 -3.496 2.530 1.013 H33 LL7 69
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
LL7 O17 S09 DOUB N N 1
LL7 O18 S09 DOUB N N 2
LL7 C04 C03 SING N N 3
LL7 C04 C05 SING N N 4
LL7 S09 N08 SING N N 5
LL7 S09 C10 SING N N 6
LL7 C03 N08 SING N N 7
LL7 C03 C02 SING N N 8
LL7 C05 C06 SING N N 9
LL7 C06 C07 SING N N 10
LL7 C14 C15 DOUB Y N 11
LL7 C14 C13 SING Y N 12
LL7 C15 C16 SING Y N 13
LL7 N08 C07 SING N N 14
LL7 C13 C12 DOUB Y N 15
LL7 C16 C11 DOUB Y N 16
LL7 C12 C11 SING Y N 17
LL7 C11 C10 SING N N 18
LL7 O01 C02 DOUB N N 19
LL7 C02 N19 SING N N 20
LL7 N19 C20 SING N N 21
LL7 C20 C21 SING N N 22
LL7 C28 O27 SING N N 23
LL7 O27 C26 SING N N 24
LL7 O30 C29 SING N N 25
LL7 O30 C31 SING N N 26
LL7 O36 C22 DOUB N N 27
LL7 C26 C29 DOUB Y N 28
LL7 C26 C25 SING Y N 29
LL7 C29 C32 SING Y N 30
LL7 C34 O33 SING N N 31
LL7 C25 C24 DOUB Y N 32
LL7 C32 O33 SING N N 33
LL7 C32 C35 DOUB Y N 34
LL7 C22 N23 SING N N 35
LL7 C22 C21 SING N N 36
LL7 C24 C35 SING Y N 37
LL7 C24 N23 SING N N 38
LL7 C03 H1 SING N N 39
LL7 C04 H2 SING N N 40
LL7 C04 H3 SING N N 41
LL7 C05 H4 SING N N 42
LL7 C05 H5 SING N N 43
LL7 C06 H6 SING N N 44
LL7 C06 H7 SING N N 45
LL7 C07 H8 SING N N 46
LL7 C07 H9 SING N N 47
LL7 C10 H10 SING N N 48
LL7 C10 H11 SING N N 49
LL7 C12 H12 SING N N 50
LL7 C13 H13 SING N N 51
LL7 C14 H14 SING N N 52
LL7 C15 H15 SING N N 53
LL7 C16 H16 SING N N 54
LL7 C20 H17 SING N N 55
LL7 C20 H18 SING N N 56
LL7 C21 H19 SING N N 57
LL7 C21 H20 SING N N 58
LL7 C25 H21 SING N N 59
LL7 C28 H22 SING N N 60
LL7 C28 H23 SING N N 61
LL7 C28 H24 SING N N 62
LL7 C31 H25 SING N N 63
LL7 C31 H26 SING N N 64
LL7 C31 H27 SING N N 65
LL7 C34 H28 SING N N 66
LL7 C34 H29 SING N N 67
LL7 C34 H30 SING N N 68
LL7 C35 H31 SING N N 69
LL7 N19 H32 SING N N 70
LL7 N23 H33 SING N N 71
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
LL7 InChI InChI 1.03 InChI=1S/C25H33N3O7S/c1-33-21-15-19(16-22(34-2)24(21)35-3)27-23(29)12-13-26-25(30)20-11-7-8-14-28(20)36(31,32)17-18-9-5-4-6-10-18/h4-6,9-10,15-16,20H,7-8,11-14,17H2,1-3H3,(H,26,30)(H,27,29)/t20-/m0/s1
LL7 InChIKey InChI 1.03 WNVXSKRDYHCOMK-FQEVSTJZSA-N
LL7 SMILES_CANONICAL CACTVS 3.385 COc1cc(NC(=O)CCNC(=O)[C@@H]2CCCCN2[S](=O)(=O)Cc3ccccc3)cc(OC)c1OC
LL7 SMILES CACTVS 3.385 COc1cc(NC(=O)CCNC(=O)[CH]2CCCCN2[S](=O)(=O)Cc3ccccc3)cc(OC)c1OC
LL7 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 COc1cc(cc(c1OC)OC)NC(=O)CCNC(=O)[C@@H]2CCCCN2S(=O)(=O)Cc3ccccc3
LL7 SMILES "OpenEye OEToolkits" 2.0.7 COc1cc(cc(c1OC)OC)NC(=O)CCNC(=O)C2CCCCN2S(=O)(=O)Cc3ccccc3
#
_pdbx_chem_comp_identifier.comp_id LL7
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier
(2~{S})-~{N}-[3-oxidanylidene-3-[(3,4,5-trimethoxyphenyl)amino]propyl]-1-(phenylmethyl)sulfonyl-piperidine-2-carboxamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
LL7 'Create component' 2019-03-01 RCSB
LL7 'Initial release' 2020-02-12 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
LL7 C02 C 10.794 3.750 1
LL7 C03 C 10.794 5.250 2
LL7 C04 C 9.495 6.000 3
LL7 C05 C 9.495 7.500 4
LL7 C06 C 10.794 8.250 5
LL7 C07 C 12.093 7.500 6
LL7 C10 C 14.691 4.500 7
LL7 C11 C 15.990 5.250 8
LL7 C12 C 17.290 4.500 9
LL7 C13 C 18.588 5.250 10
LL7 C14 C 18.588 6.750 11
LL7 C15 C 17.290 7.500 12
LL7 C16 C 15.990 6.750 13
LL7 C20 C 9.495 1.500 14
LL7 C21 C 8.196 0.750 15
LL7 C22 C 8.196 -0.750 16
LL7 C24 C 6.897 -3.000 17
LL7 C25 C 8.196 -3.750 18
LL7 C26 C 8.196 -5.250 19
LL7 C28 C 10.794 -5.250 20
LL7 C29 C 6.897 -6.000 21
LL7 C31 C 5.598 -8.250 22
LL7 C32 C 5.598 -5.250 23
LL7 C34 C 3.000 -5.250 24
LL7 C35 C 5.598 -3.750 25
LL7 N08 N 12.093 6.000 26
LL7 N19 N 9.495 3.000 27
LL7 N23 N 6.897 -1.500 28
LL7 O01 O 12.093 3.000 29
LL7 O17 O 14.142 6.549 30
LL7 O18 O 12.642 3.951 31
LL7 O27 O 9.495 -6.000 32
LL7 O30 O 6.897 -7.500 33
LL7 O33 O 4.299 -6.000 34
LL7 O36 O 9.495 -1.500 35
LL7 S09 S 13.392 5.250 36
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
LL7 O17 S09 DOUBLE NONE 1
LL7 O18 S09 DOUBLE NONE 2
LL7 C04 C03 SINGLE NONE 3
LL7 C04 C05 SINGLE NONE 4
LL7 S09 N08 SINGLE NONE 5
LL7 S09 C10 SINGLE NONE 6
LL7 C03 N08 SINGLE NONE 7
LL7 C03 C02 SINGLE BEGINDASH 8
LL7 C05 C06 SINGLE NONE 9
LL7 C06 C07 SINGLE NONE 10
LL7 C14 C15 DOUBLE NONE 11
LL7 C14 C13 SINGLE NONE 12
LL7 C15 C16 SINGLE NONE 13
LL7 N08 C07 SINGLE NONE 14
LL7 C13 C12 DOUBLE NONE 15
LL7 C16 C11 DOUBLE NONE 16
LL7 C12 C11 SINGLE NONE 17
LL7 C11 C10 SINGLE NONE 18
LL7 O01 C02 DOUBLE NONE 19
LL7 C02 N19 SINGLE NONE 20
LL7 N19 C20 SINGLE NONE 21
LL7 C20 C21 SINGLE NONE 22
LL7 C28 O27 SINGLE NONE 23
LL7 O27 C26 SINGLE NONE 24
LL7 O30 C29 SINGLE NONE 25
LL7 O30 C31 SINGLE NONE 26
LL7 O36 C22 DOUBLE NONE 27
LL7 C26 C29 SINGLE NONE 28
LL7 C26 C25 DOUBLE NONE 29
LL7 C29 C32 DOUBLE NONE 30
LL7 C34 O33 SINGLE NONE 31
LL7 C25 C24 SINGLE NONE 32
LL7 C32 O33 SINGLE NONE 33
LL7 C32 C35 SINGLE NONE 34
LL7 C22 N23 SINGLE NONE 35
LL7 C22 C21 SINGLE NONE 36
LL7 C24 C35 DOUBLE NONE 37
LL7 C24 N23 SINGLE NONE 38
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
LL7 MurckoScaffold S1 scaffold 'O=C(CCNC(=O)[C@@H]1CCCCN1S(=O)(=O)Cc1ccccc1)Nc1ccccc1' InChI=1S/C22H27N3O4S/c26-21(24-19-11-5-2-6-12-19)14-15-23-22(27)20-13-7-8-16-25(20)30(28,29)17-18-9-3-1-4-10-18/h1-6,9-12,20H,7-8,13-17H2,(H,23,27)(H,24,26)/t20-/m0/s1 KOEVWJMYHCGRCS-FQEVSTJZSA-N
LL7 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
LL7 peptide F2 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
LL7 phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
LL7 Z133621020 F4 fragment CNS(=O)(=O)Cc1ccccc1 InChI=1S/C8H11NO2S/c1-9-12(10,11)7-8-5-3-2-4-6-8/h2-6,9H,7H2,1H3 NYLBABUQWKLNCW-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
LL7 C02 S1 1
LL7 C03 S1 1
LL7 C04 S1 1
LL7 C05 S1 1
LL7 C06 S1 1
LL7 C07 S1 1
LL7 C10 S1 1
LL7 C11 S1 1
LL7 C12 S1 1
LL7 C13 S1 1
LL7 C14 S1 1
LL7 C15 S1 1
LL7 C16 S1 1
LL7 C20 S1 1
LL7 C21 S1 1
LL7 C22 S1 1
LL7 C24 S1 1
LL7 C25 S1 1
LL7 C26 S1 1
LL7 C29 S1 1
LL7 C32 S1 1
LL7 C35 S1 1
LL7 N08 S1 1
LL7 N19 S1 1
LL7 N23 S1 1
LL7 O01 S1 1
LL7 O17 S1 1
LL7 O18 S1 1
LL7 O36 S1 1
LL7 S09 S1 1
LL7 N19 F1 1
LL7 C02 F1 1
LL7 O01 F1 1
LL7 C03 F1 1
LL7 N23 F1 2
LL7 C22 F1 2
LL7 O36 F1 2
LL7 C21 F1 2
LL7 O01 F2 1
LL7 C02 F2 1
LL7 C03 F2 1
LL7 N08 F2 1
LL7 C11 F3 1
LL7 C16 F3 1
LL7 C15 F3 1
LL7 C14 F3 1
LL7 C13 F3 1
LL7 C12 F3 1
LL7 C24 F3 2
LL7 C25 F3 2
LL7 C26 F3 2
LL7 C29 F3 2
LL7 C32 F3 2
LL7 C35 F3 2
LL7 C03 F4 1
LL7 N08 F4 1
LL7 S09 F4 1
LL7 O17 F4 1
LL7 O18 F4 1
LL7 C10 F4 1
LL7 C11 F4 1
LL7 C16 F4 1
LL7 C15 F4 1
LL7 C14 F4 1
LL7 C13 F4 1
LL7 C12 F4 1
LL7 C07 F4 2
LL7 N08 F4 2
LL7 S09 F4 2
LL7 O17 F4 2
LL7 O18 F4 2
LL7 C10 F4 2
LL7 C11 F4 2
LL7 C16 F4 2
LL7 C15 F4 2
LL7 C14 F4 2
LL7 C13 F4 2
LL7 C12 F4 2
#
_pdbe_chem_comp_rdkit_properties.comp_id LL7
_pdbe_chem_comp_rdkit_properties.exactmw 519.204
_pdbe_chem_comp_rdkit_properties.amw 519.620
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 10
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 14
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 36
_pdbe_chem_comp_rdkit_properties.NumAtoms 69
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 11
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.440
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 257.991
_pdbe_chem_comp_rdkit_properties.tpsa 123.270
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.719
_pdbe_chem_comp_rdkit_properties.CrippenMR 132.845
_pdbe_chem_comp_rdkit_properties.chi0v 17.924
_pdbe_chem_comp_rdkit_properties.chi1v 10.135
_pdbe_chem_comp_rdkit_properties.chi2v 4.711
_pdbe_chem_comp_rdkit_properties.chi3v 4.711
_pdbe_chem_comp_rdkit_properties.chi4v 3.118
_pdbe_chem_comp_rdkit_properties.chi0n 50.108
_pdbe_chem_comp_rdkit_properties.chi1n 25.089
_pdbe_chem_comp_rdkit_properties.chi2n 3.494
_pdbe_chem_comp_rdkit_properties.chi3n 3.494
_pdbe_chem_comp_rdkit_properties.chi4n 2.136
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.310
_pdbe_chem_comp_rdkit_properties.kappa1 7.165
_pdbe_chem_comp_rdkit_properties.kappa2 12.590
_pdbe_chem_comp_rdkit_properties.kappa3 6.884
_pdbe_chem_comp_rdkit_properties.Phi 2.506
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
LL7 UniChem PDBe LL7
LL7 UniChem PubChem 145915900
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
LL7 C02 1.757 1.191 -0.516 ETKDGv3 1
LL7 C03 2.027 0.879 0.938 ETKDGv3 2
LL7 C04 0.751 0.389 1.662 ETKDGv3 3
LL7 C05 -0.163 1.538 2.079 ETKDGv3 4
LL7 C06 0.619 2.551 2.905 ETKDGv3 5
LL7 C07 1.791 3.090 2.084 ETKDGv3 6
LL7 C10 5.460 1.393 2.174 ETKDGv3 7
LL7 C11 5.438 0.665 0.860 ETKDGv3 8
LL7 C12 5.490 -0.818 0.837 ETKDGv3 9
LL7 C13 5.377 -1.479 -0.322 ETKDGv3 10
LL7 C14 5.203 -0.734 -1.585 ETKDGv3 11
LL7 C15 5.161 0.603 -1.573 ETKDGv3 12
LL7 C16 5.277 1.336 -0.295 ETKDGv3 13
LL7 C20 1.504 0.335 -2.899 ETKDGv3 14
LL7 C21 0.094 0.817 -3.255 ETKDGv3 15
LL7 C22 -0.953 -0.143 -2.768 ETKDGv3 16
LL7 C24 -2.766 -0.660 -1.066 ETKDGv3 17
LL7 C25 -3.718 -1.323 -1.988 ETKDGv3 18
LL7 C26 -4.739 -2.066 -1.515 ETKDGv3 19
LL7 C28 -5.596 -2.642 -3.808 ETKDGv3 20
LL7 C29 -4.912 -2.215 -0.032 ETKDGv3 21
LL7 C31 -6.916 -3.741 -0.147 ETKDGv3 22
LL7 C32 -4.065 -1.585 0.802 ETKDGv3 23
LL7 C34 -3.426 -1.117 3.172 ETKDGv3 24
LL7 C35 -2.958 -0.762 0.254 ETKDGv3 25
LL7 N08 2.699 2.018 1.620 ETKDGv3 26
LL7 N19 1.649 0.116 -1.460 ETKDGv3 27
LL7 N23 -1.679 0.142 -1.562 ETKDGv3 28
LL7 O01 1.628 2.384 -0.903 ETKDGv3 29
LL7 O17 3.430 0.133 3.398 ETKDGv3 30
LL7 O18 3.848 2.458 4.016 ETKDGv3 31
LL7 O27 -5.648 -2.693 -2.385 ETKDGv3 32
LL7 O30 -5.933 -2.988 0.552 ETKDGv3 33
LL7 O33 -4.252 -1.729 2.186 ETKDGv3 34
LL7 O36 -1.129 -1.227 -3.387 ETKDGv3 35
LL7 S09 3.816 1.487 2.869 ETKDGv3 36
LL7 H1 2.721 0.012 0.916 ETKDGv3 37
LL7 H2 1.037 -0.182 2.571 ETKDGv3 38
LL7 H3 0.189 -0.315 1.011 ETKDGv3 39
LL7 H4 -1.004 1.138 2.687 ETKDGv3 40
LL7 H5 -0.592 2.029 1.179 ETKDGv3 41
LL7 H6 -0.051 3.392 3.185 ETKDGv3 42
LL7 H7 0.991 2.079 3.840 ETKDGv3 43
LL7 H8 1.392 3.644 1.209 ETKDGv3 44
LL7 H9 2.346 3.849 2.674 ETKDGv3 45
LL7 H10 5.856 2.423 2.043 ETKDGv3 46
LL7 H11 6.126 0.866 2.889 ETKDGv3 47
LL7 H12 5.607 -1.372 1.761 ETKDGv3 48
LL7 H13 5.407 -2.561 -0.335 ETKDGv3 49
LL7 H14 5.107 -1.272 -2.519 ETKDGv3 50
LL7 H15 5.026 1.151 -2.497 ETKDGv3 51
LL7 H16 5.201 2.417 -0.302 ETKDGv3 52
LL7 H17 2.255 1.080 -3.242 ETKDGv3 53
LL7 H18 1.710 -0.617 -3.437 ETKDGv3 54
LL7 H19 -0.085 1.825 -2.826 ETKDGv3 55
LL7 H20 0.013 0.911 -4.359 ETKDGv3 56
LL7 H21 -3.598 -1.169 -3.049 ETKDGv3 57
LL7 H22 -6.433 -3.242 -4.221 ETKDGv3 58
LL7 H23 -4.639 -3.072 -4.172 ETKDGv3 59
LL7 H24 -5.706 -1.594 -4.157 ETKDGv3 60
LL7 H25 -6.430 -4.513 -0.781 ETKDGv3 61
LL7 H26 -7.553 -3.068 -0.758 ETKDGv3 62
LL7 H27 -7.564 -4.256 0.590 ETKDGv3 63
LL7 H28 -3.794 -1.402 4.179 ETKDGv3 64
LL7 H29 -2.378 -1.468 3.064 ETKDGv3 65
LL7 H30 -3.472 -0.012 3.076 ETKDGv3 66
LL7 H31 -2.283 -0.253 0.926 ETKDGv3 67
LL7 H32 1.765 -0.866 -1.122 ETKDGv3 68
LL7 H33 -1.334 0.926 -0.965 ETKDGv3 69
#