data_LQ6
#
_chem_comp.id LQ6
_chem_comp.name
(2~{S})-4-[[2,4-bis(oxidanylidene)-1~{H}-pyrimidin-6-yl]carbonyl]-1-(3,4-dichlorophenyl)-~{N}-(thiophen-2-ylmethyl)piperazine-2-carboxamide
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C21 H19 Cl2 N5 O4 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2022-07-07
_chem_comp.pdbx_modified_date 2022-09-23
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 508.378
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code LQ6
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 8ACD
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
LQ6 N1 N1 N 0 1 N N N N N N 11.503 1.564 19.625 2.202 -0.739 0.853 N1 LQ6 1
LQ6 N3 N2 N 0 1 N N N N N N 11.803 -0.184 16.994 4.650 -0.210 -1.325 N3 LQ6 2
LQ6 C4 C1 C 0 1 Y N N N N N 9.906 2.014 23.512 -0.927 1.950 0.953 C4 LQ6 3
LQ6 C5 C2 C 0 1 N N N N N N 11.142 2.914 21.613 1.402 1.563 0.856 C5 LQ6 4
LQ6 C6 C3 C 0 1 N N N N N N 12.120 2.522 20.534 2.497 0.613 1.350 C6 LQ6 5
LQ6 C7 C4 C 0 1 N N N N N N 11.062 0.363 20.331 0.856 -1.287 1.081 C7 LQ6 6
LQ6 C8 C5 C 0 1 N N S N N N 10.082 0.728 21.443 -0.175 -0.261 0.598 C8 LQ6 7
LQ6 C10 C6 C 0 1 N N N N N N 10.113 -2.100 23.982 -3.366 -2.362 0.833 C10 LQ6 8
LQ6 C13 C7 C 0 1 Y N N N N N 8.760 -0.653 27.226 -3.700 -5.968 -0.080 C13 LQ6 9
LQ6 C15 C8 C 0 1 N N N N N N 11.373 1.796 18.313 3.138 -1.456 0.199 C15 LQ6 10
LQ6 C17 C9 C 0 1 N N N N N N 11.469 -1.234 16.184 5.831 0.353 -1.629 C17 LQ6 11
LQ6 C20 C10 C 0 1 Y N N N N N 8.529 1.755 23.571 -1.251 2.237 -0.366 C20 LQ6 12
LQ6 N N3 N 0 1 N N N N N N 10.650 1.736 22.347 0.087 1.033 1.241 N LQ6 13
LQ6 C C11 C 0 1 Y N N N N N 7.821 2.039 24.728 -2.251 3.149 -0.648 C LQ6 14
LQ6 O O1 O 0 1 N N N N N N 8.790 -1.276 21.657 -2.261 -0.054 1.681 O LQ6 15
LQ6 C1 C12 C 0 1 Y N N N N N 8.475 2.569 25.829 -2.928 3.776 0.384 C1 LQ6 16
LQ6 C11 C13 C 0 1 Y N N N N N 9.343 -1.573 25.149 -3.633 -3.691 0.175 C11 LQ6 17
LQ6 C12 C14 C 0 1 Y N N N N N 9.834 -1.034 26.366 -3.367 -4.883 0.712 C12 LQ6 18
LQ6 C14 C15 C 0 1 Y N N N N N 7.548 -0.893 26.672 -4.232 -5.657 -1.264 C14 LQ6 19
LQ6 C16 C16 C 0 1 N N N N N N 10.872 0.720 17.441 4.452 -0.845 -0.118 C16 LQ6 20
LQ6 C18 C17 C 0 1 N N N N N N 9.563 0.605 17.101 5.471 -0.906 0.778 C18 LQ6 21
LQ6 C19 C18 C 0 1 N N N N N N 9.146 -0.460 16.258 6.753 -0.288 0.421 C19 LQ6 22
LQ6 C2 C19 C 0 1 Y N N N N N 9.829 2.838 25.771 -2.606 3.492 1.699 C2 LQ6 23
LQ6 C3 C20 C 0 1 Y N N N N N 10.542 2.564 24.618 -1.608 2.581 1.986 C3 LQ6 24
LQ6 C9 C21 C 0 1 N N N N N N 9.720 -0.604 22.101 -1.560 -0.732 0.959 C9 LQ6 25
LQ6 N2 N4 N 0 1 N N N N N N 10.492 -0.999 23.121 -2.020 -1.905 0.481 N2 LQ6 26
LQ6 N4 N5 N 0 1 N N N N N N 10.147 -1.320 15.838 6.869 0.325 -0.775 N4 LQ6 27
LQ6 O1 O2 O 0 1 N N N N N N 12.295 -2.067 15.822 5.964 0.904 -2.705 O1 LQ6 28
LQ6 O2 O3 O 0 1 N N N N N N 7.986 -0.674 15.906 7.693 -0.320 1.194 O2 LQ6 29
LQ6 O3 O4 O 0 1 N N N N N N 11.661 2.877 17.815 2.906 -2.602 -0.129 O3 LQ6 30
LQ6 S S1 S 0 1 Y N N N N N 7.642 -1.581 25.112 -4.341 -3.909 -1.421 S LQ6 31
LQ6 CL CL1 CL 0 0 N N N N N N 6.105 1.754 24.763 -2.658 3.508 -2.297 CL LQ6 32
LQ6 CL1 CL2 CL 0 0 N N N N N N 7.622 2.867 27.308 -4.182 4.922 0.027 CL1 LQ6 33
LQ6 H15 H1 H 0 1 N N N N N N 12.758 -0.071 17.270 3.922 -0.166 -1.965 H15 LQ6 34
LQ6 H3 H2 H 0 1 N N N N N N 11.642 3.593 22.320 1.543 2.546 1.306 H3 LQ6 35
LQ6 H4 H3 H 0 1 N N N N N N 10.288 3.430 21.151 1.456 1.648 -0.229 H4 LQ6 36
LQ6 H6 H4 H 0 1 N N N N N N 13.008 2.066 20.996 2.513 0.606 2.440 H6 LQ6 37
LQ6 H5 H5 H 0 1 N N N N N N 12.419 3.418 19.971 3.465 0.940 0.970 H5 LQ6 38
LQ6 H7 H6 H 0 1 N N N N N N 10.567 -0.314 19.620 0.739 -2.215 0.522 H7 LQ6 39
LQ6 H8 H7 H 0 1 N N N N N N 11.936 -0.141 20.769 0.714 -1.475 2.145 H8 LQ6 40
LQ6 H H8 H 0 1 N N N N N N 9.173 1.138 20.978 -0.099 -0.151 -0.484 H LQ6 41
LQ6 H11 H9 H 0 1 N N N N N N 9.487 -2.808 23.419 -4.099 -1.633 0.489 H11 LQ6 42
LQ6 H10 H10 H 0 1 N N N N N N 11.017 -2.614 24.340 -3.442 -2.471 1.915 H10 LQ6 43
LQ6 H13 H11 H 0 1 N N N N N N 8.898 -0.222 28.207 -3.537 -6.988 0.234 H13 LQ6 44
LQ6 H18 H12 H 0 1 N N N N N N 8.021 1.335 22.716 -0.723 1.748 -1.171 H18 LQ6 45
LQ6 H12 H13 H 0 1 N N N N N N 10.881 -0.926 26.609 -2.925 -4.993 1.692 H12 LQ6 46
LQ6 H14 H14 H 0 1 N N N N N N 6.614 -0.671 27.168 -4.547 -6.370 -2.011 H14 LQ6 47
LQ6 H17 H15 H 0 1 N N N N N N 8.842 1.320 17.469 5.341 -1.398 1.731 H17 LQ6 48
LQ6 H1 H16 H 0 1 N N N N N N 10.331 3.263 26.627 -3.135 3.983 2.503 H1 LQ6 49
LQ6 H2 H17 H 0 1 N N N N N N 11.600 2.779 24.577 -1.357 2.361 3.013 H2 LQ6 50
LQ6 H9 H18 H 0 1 N N N N N N 11.353 -0.521 23.293 -1.459 -2.447 -0.096 H9 LQ6 51
LQ6 H16 H19 H 0 1 N N N N N N 9.881 -2.068 15.230 7.709 0.741 -1.025 H16 LQ6 52
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
LQ6 O1 C17 DOUB N N 1
LQ6 N4 C17 SING N N 2
LQ6 N4 C19 SING N N 3
LQ6 O2 C19 DOUB N N 4
LQ6 C17 N3 SING N N 5
LQ6 C19 C18 SING N N 6
LQ6 N3 C16 SING N N 7
LQ6 C18 C16 DOUB N N 8
LQ6 C16 C15 SING N N 9
LQ6 O3 C15 DOUB N N 10
LQ6 C15 N1 SING N N 11
LQ6 N1 C7 SING N N 12
LQ6 N1 C6 SING N N 13
LQ6 C7 C8 SING N N 14
LQ6 C6 C5 SING N N 15
LQ6 C8 C9 SING N N 16
LQ6 C8 N SING N N 17
LQ6 C5 N SING N N 18
LQ6 O C9 DOUB N N 19
LQ6 C9 N2 SING N N 20
LQ6 N C4 SING N N 21
LQ6 N2 C10 SING N N 22
LQ6 C4 C20 DOUB Y N 23
LQ6 C4 C3 SING Y N 24
LQ6 C20 C SING Y N 25
LQ6 C10 C11 SING N N 26
LQ6 C3 C2 DOUB Y N 27
LQ6 C CL SING N N 28
LQ6 C C1 DOUB Y N 29
LQ6 S C11 SING Y N 30
LQ6 S C14 SING Y N 31
LQ6 C11 C12 DOUB Y N 32
LQ6 C2 C1 SING Y N 33
LQ6 C1 CL1 SING N N 34
LQ6 C12 C13 SING Y N 35
LQ6 C14 C13 DOUB Y N 36
LQ6 N3 H15 SING N N 37
LQ6 C5 H3 SING N N 38
LQ6 C5 H4 SING N N 39
LQ6 C6 H6 SING N N 40
LQ6 C6 H5 SING N N 41
LQ6 C7 H7 SING N N 42
LQ6 C7 H8 SING N N 43
LQ6 C8 H SING N N 44
LQ6 C10 H11 SING N N 45
LQ6 C10 H10 SING N N 46
LQ6 C13 H13 SING N N 47
LQ6 C20 H18 SING N N 48
LQ6 C12 H12 SING N N 49
LQ6 C14 H14 SING N N 50
LQ6 C18 H17 SING N N 51
LQ6 C2 H1 SING N N 52
LQ6 C3 H2 SING N N 53
LQ6 N2 H9 SING N N 54
LQ6 N4 H16 SING N N 55
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
LQ6 InChI InChI 1.06 InChI=1S/C21H19Cl2N5O4S/c22-14-4-3-12(8-15(14)23)28-6-5-27(20(31)16-9-18(29)26-21(32)25-16)11-17(28)19(30)24-10-13-2-1-7-33-13/h1-4,7-9,17H,5-6,10-11H2,(H,24,30)(H2,25,26,29,32)/t17-/m0/s1
LQ6 InChIKey InChI 1.06 PBLOKSLGZKWIQI-KRWDZBQOSA-N
LQ6 SMILES_CANONICAL CACTVS 3.385 Clc1ccc(cc1Cl)N2CCN(C[C@H]2C(=O)NCc3sccc3)C(=O)C4=CC(=O)NC(=O)N4
LQ6 SMILES CACTVS 3.385 Clc1ccc(cc1Cl)N2CCN(C[CH]2C(=O)NCc3sccc3)C(=O)C4=CC(=O)NC(=O)N4
LQ6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 c1cc(sc1)CNC(=O)[C@@H]2CN(CCN2c3ccc(c(c3)Cl)Cl)C(=O)C4=CC(=O)NC(=O)N4
LQ6 SMILES "OpenEye OEToolkits" 2.0.7 c1cc(sc1)CNC(=O)C2CN(CCN2c3ccc(c(c3)Cl)Cl)C(=O)C4=CC(=O)NC(=O)N4
#
_pdbx_chem_comp_identifier.comp_id LQ6
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier
(2~{S})-4-[[2,4-bis(oxidanylidene)-1~{H}-pyrimidin-6-yl]carbonyl]-1-(3,4-dichlorophenyl)-~{N}-(thiophen-2-ylmethyl)piperazine-2-carboxamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
LQ6 'Create component' 2022-07-07 PDBE
LQ6 'Modify descriptor' 2022-08-22 RCSB
LQ6 'Initial release' 2022-09-28 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
LQ6 N1 N 11.869 1.500 1
LQ6 N3 N 13.168 5.250 2
LQ6 C4 C 11.869 -3.000 3
LQ6 C5 C 13.168 -0.750 4
LQ6 C6 C 13.168 0.750 5
LQ6 C7 C 10.570 0.750 6
LQ6 C8 C 10.570 -0.750 7
LQ6 C10 C 6.673 -1.500 8
LQ6 C13 C 3.750 1.054 9
LQ6 C15 C 11.869 3.000 10
LQ6 C17 C 14.467 6.000 11
LQ6 C20 C 10.570 -3.750 12
LQ6 N N 11.869 -1.500 13
LQ6 C C 10.570 -5.250 14
LQ6 O O 9.271 -3.000 15
LQ6 C1 C 11.869 -6.000 16
LQ6 C11 C 5.374 -0.750 17
LQ6 C12 C 5.217 0.742 18
LQ6 C14 C 3.000 -0.245 19
LQ6 C16 C 13.168 3.750 20
LQ6 C18 C 14.467 3.000 21
LQ6 C19 C 15.766 3.750 22
LQ6 C2 C 13.168 -5.250 23
LQ6 C3 C 13.168 -3.750 24
LQ6 C9 C 9.271 -1.500 25
LQ6 N2 N 7.972 -0.750 26
LQ6 N4 N 15.766 5.250 27
LQ6 O1 O 14.467 7.500 28
LQ6 O2 O 17.065 3.000 29
LQ6 O3 O 10.570 3.750 30
LQ6 S S 4.004 -1.360 31
LQ6 CL Cl 9.271 -6.000 32
LQ6 CL1 Cl 11.869 -7.500 33
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
LQ6 O1 C17 DOUBLE NONE 1
LQ6 N4 C17 SINGLE NONE 2
LQ6 N4 C19 SINGLE NONE 3
LQ6 O2 C19 DOUBLE NONE 4
LQ6 C17 N3 SINGLE NONE 5
LQ6 C19 C18 SINGLE NONE 6
LQ6 N3 C16 SINGLE NONE 7
LQ6 C18 C16 DOUBLE NONE 8
LQ6 C16 C15 SINGLE NONE 9
LQ6 O3 C15 DOUBLE NONE 10
LQ6 C15 N1 SINGLE NONE 11
LQ6 N1 C7 SINGLE NONE 12
LQ6 N1 C6 SINGLE NONE 13
LQ6 C7 C8 SINGLE NONE 14
LQ6 C6 C5 SINGLE NONE 15
LQ6 C8 C9 SINGLE BEGINDASH 16
LQ6 C8 N SINGLE NONE 17
LQ6 C5 N SINGLE NONE 18
LQ6 O C9 DOUBLE NONE 19
LQ6 C9 N2 SINGLE NONE 20
LQ6 N C4 SINGLE NONE 21
LQ6 N2 C10 SINGLE NONE 22
LQ6 C4 C20 DOUBLE NONE 23
LQ6 C4 C3 SINGLE NONE 24
LQ6 C20 C SINGLE NONE 25
LQ6 C10 C11 SINGLE NONE 26
LQ6 C3 C2 DOUBLE NONE 27
LQ6 C CL SINGLE NONE 28
LQ6 C C1 DOUBLE NONE 29
LQ6 S C11 SINGLE NONE 30
LQ6 S C14 SINGLE NONE 31
LQ6 C11 C12 DOUBLE NONE 32
LQ6 C2 C1 SINGLE NONE 33
LQ6 C1 CL1 SINGLE NONE 34
LQ6 C12 C13 SINGLE NONE 35
LQ6 C14 C13 DOUBLE NONE 36
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
LQ6 MurckoScaffold S1 scaffold 'O=C(NCc1cccs1)[C@@H]1CN(C(=O)c2cc(=O)[nH]c(=O)[nH]2)CCN1c1ccccc1' InChI=1S/C21H21N5O4S/c27-18-11-16(23-21(30)24-18)20(29)25-8-9-26(14-5-2-1-3-6-14)17(13-25)19(28)22-12-15-7-4-10-31-15/h1-7,10-11,17H,8-9,12-13H2,(H,22,28)(H2,23,24,27,30)/t17-/m0/s1 KRSXOIJEAFXDTP-KRWDZBQOSA-N
LQ6 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
LQ6 peptide F2 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
LQ6 phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
LQ6 piperazine F4 fragment C1CNCCN1 InChI=1S/C4H10N2/c1-2-6-4-3-5-1/h5-6H,1-4H2 GLUUGHFHXGJENI-UHFFFAOYSA-N
LQ6 pyrimidine F5 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
LQ6 thiophen F6 fragment c1ccsc1 InChI=1S/C4H4S/c1-2-4-5-3-1/h1-4H YTPLMLYBLZKORZ-UHFFFAOYSA-N
LQ6 Z275165822 F7 fragment CC(=O)N1CCN(c2ccc(Cl)cc2)CC1 InChI=1S/C12H15ClN2O/c1-10(16)14-6-8-15(9-7-14)12-4-2-11(13)3-5-12/h2-5H,6-9H2,1H3 UVYFWYMZWQBGAQ-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
LQ6 N1 S1 1
LQ6 N3 S1 1
LQ6 C4 S1 1
LQ6 C5 S1 1
LQ6 C6 S1 1
LQ6 C7 S1 1
LQ6 C8 S1 1
LQ6 C10 S1 1
LQ6 C13 S1 1
LQ6 C15 S1 1
LQ6 C17 S1 1
LQ6 C20 S1 1
LQ6 N S1 1
LQ6 C S1 1
LQ6 O S1 1
LQ6 C1 S1 1
LQ6 C11 S1 1
LQ6 C12 S1 1
LQ6 C14 S1 1
LQ6 C16 S1 1
LQ6 C18 S1 1
LQ6 C19 S1 1
LQ6 C2 S1 1
LQ6 C3 S1 1
LQ6 C9 S1 1
LQ6 N2 S1 1
LQ6 N4 S1 1
LQ6 O1 S1 1
LQ6 O2 S1 1
LQ6 O3 S1 1
LQ6 S S1 1
LQ6 N1 F1 1
LQ6 C15 F1 1
LQ6 O3 F1 1
LQ6 C16 F1 1
LQ6 N2 F1 2
LQ6 C9 F1 2
LQ6 O F1 2
LQ6 C8 F1 2
LQ6 O F2 1
LQ6 C9 F2 1
LQ6 C8 F2 1
LQ6 N F2 1
LQ6 C4 F3 1
LQ6 C20 F3 1
LQ6 C F3 1
LQ6 C1 F3 1
LQ6 C2 F3 1
LQ6 C3 F3 1
LQ6 N1 F4 1
LQ6 C7 F4 1
LQ6 C8 F4 1
LQ6 N F4 1
LQ6 C5 F4 1
LQ6 C6 F4 1
LQ6 C18 F5 1
LQ6 C19 F5 1
LQ6 N4 F5 1
LQ6 C17 F5 1
LQ6 N3 F5 1
LQ6 C16 F5 1
LQ6 C11 F6 1
LQ6 C12 F6 1
LQ6 C13 F6 1
LQ6 C14 F6 1
LQ6 S F6 1
LQ6 C16 F7 1
LQ6 C15 F7 1
LQ6 O3 F7 1
LQ6 N1 F7 1
LQ6 C7 F7 1
LQ6 C8 F7 1
LQ6 N F7 1
LQ6 C5 F7 1
LQ6 C6 F7 1
LQ6 C4 F7 1
LQ6 C20 F7 1
LQ6 C F7 1
LQ6 C1 F7 1
LQ6 CL1 F7 1
LQ6 C2 F7 1
LQ6 C3 F7 1
#
_pdbe_chem_comp_rdkit_properties.comp_id LQ6
_pdbe_chem_comp_rdkit_properties.exactmw 507.053
_pdbe_chem_comp_rdkit_properties.amw 508.387
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 9
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 5
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 6
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 33
_pdbe_chem_comp_rdkit_properties.NumAtoms 52
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 12
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.238
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 228.365
_pdbe_chem_comp_rdkit_properties.tpsa 118.370
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.389
_pdbe_chem_comp_rdkit_properties.CrippenMR 126.209
_pdbe_chem_comp_rdkit_properties.chi0v 17.862
_pdbe_chem_comp_rdkit_properties.chi1v 9.858
_pdbe_chem_comp_rdkit_properties.chi2v 4.793
_pdbe_chem_comp_rdkit_properties.chi3v 4.793
_pdbe_chem_comp_rdkit_properties.chi4v 2.814
_pdbe_chem_comp_rdkit_properties.chi0n 34.533
_pdbe_chem_comp_rdkit_properties.chi1n 17.628
_pdbe_chem_comp_rdkit_properties.chi2n 3.527
_pdbe_chem_comp_rdkit_properties.chi3n 3.527
_pdbe_chem_comp_rdkit_properties.chi4n 2.185
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.080
_pdbe_chem_comp_rdkit_properties.kappa1 9.283
_pdbe_chem_comp_rdkit_properties.kappa2 9.817
_pdbe_chem_comp_rdkit_properties.kappa3 5.294
_pdbe_chem_comp_rdkit_properties.Phi 2.762
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
LQ6 UniChem ChEMBL CHEMBL5204987
LQ6 UniChem PDBe LQ6
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
LQ6 N1 -1.816 1.125 -1.566 ETKDGv3 1
LQ6 N3 -5.355 0.156 -2.519 ETKDGv3 2
LQ6 C4 1.441 1.459 1.134 ETKDGv3 3
LQ6 C5 0.527 1.852 -1.179 ETKDGv3 4
LQ6 C6 -0.872 2.247 -1.663 ETKDGv3 5
LQ6 C7 -1.402 -0.132 -0.929 ETKDGv3 6
LQ6 C8 -0.610 0.164 0.356 ETKDGv3 7
LQ6 C10 1.880 -2.792 0.886 ETKDGv3 8
LQ6 C13 4.554 -1.207 3.067 ETKDGv3 9
LQ6 C15 -3.160 1.303 -2.055 ETKDGv3 10
LQ6 C17 -6.131 -0.888 -3.115 ETKDGv3 11
LQ6 C20 1.108 1.527 2.437 ETKDGv3 12
LQ6 N 0.446 1.175 0.123 ETKDGv3 13
LQ6 C 2.132 1.811 3.466 ETKDGv3 14
LQ6 O -0.560 -1.675 1.885 ETKDGv3 15
LQ6 C1 3.410 2.014 3.100 ETKDGv3 16
LQ6 C11 2.744 -2.262 1.986 ETKDGv3 17
LQ6 C12 3.947 -1.715 1.818 ETKDGv3 18
LQ6 C14 3.791 -1.356 4.148 ETKDGv3 19
LQ6 C16 -3.923 0.195 -2.674 ETKDGv3 20
LQ6 C18 -3.298 -0.736 -3.416 ETKDGv3 21
LQ6 C19 -4.058 -1.828 -4.048 ETKDGv3 22
LQ6 C2 3.786 1.931 1.674 ETKDGv3 23
LQ6 C3 2.861 1.664 0.746 ETKDGv3 24
LQ6 C9 -0.021 -1.115 0.892 ETKDGv3 25
LQ6 N2 1.132 -1.700 0.270 ETKDGv3 26
LQ6 N4 -5.476 -1.895 -3.885 ETKDGv3 27
LQ6 O1 -7.381 -0.919 -2.960 ETKDGv3 28
LQ6 O2 -3.459 -2.699 -4.732 ETKDGv3 29
LQ6 O3 -3.710 2.433 -1.955 ETKDGv3 30
LQ6 S 2.263 -2.145 3.694 ETKDGv3 31
LQ6 CL 1.635 1.868 5.152 ETKDGv3 32
LQ6 CL1 4.666 2.355 4.283 ETKDGv3 33
LQ6 H15 -5.839 0.885 -1.948 ETKDGv3 34
LQ6 H3 1.002 1.171 -1.918 ETKDGv3 35
LQ6 H4 1.144 2.775 -1.109 ETKDGv3 36
LQ6 H6 -1.243 3.092 -1.042 ETKDGv3 37
LQ6 H5 -0.806 2.588 -2.719 ETKDGv3 38
LQ6 H7 -2.288 -0.753 -0.669 ETKDGv3 39
LQ6 H8 -0.772 -0.706 -1.643 ETKDGv3 40
LQ6 H -1.328 0.573 1.100 ETKDGv3 41
LQ6 H11 1.183 -3.561 1.282 ETKDGv3 42
LQ6 H10 2.517 -3.282 0.118 ETKDGv3 43
LQ6 H13 5.528 -0.738 3.101 ETKDGv3 44
LQ6 H18 0.083 1.389 2.753 ETKDGv3 45
LQ6 H12 4.432 -1.636 0.853 ETKDGv3 46
LQ6 H14 4.065 -1.032 5.143 ETKDGv3 47
LQ6 H17 -2.230 -0.685 -3.582 ETKDGv3 48
LQ6 H1 4.818 2.071 1.380 ETKDGv3 49
LQ6 H2 3.160 1.581 -0.291 ETKDGv3 50
LQ6 H9 1.506 -1.280 -0.610 ETKDGv3 51
LQ6 H16 -6.025 -2.667 -4.328 ETKDGv3 52
#