data_LSW
#
_chem_comp.id LSW
_chem_comp.name N~2~-[(1S)-1-carboxy-3-phenylpropyl]-L-lysyl-L-tryptophan
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C27 H34 N4 O5"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2010-02-23
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 494.583
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code LSW
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 3L3N
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
LSW C C C 0 1 N N N N N N 42.554 6.059 114.334 -1.514 1.423 -2.425 C LSW 1
LSW N N N 0 1 N N N N N N 42.887 8.475 114.039 -1.376 1.195 -0.009 N LSW 2
LSW O O O 0 1 N N N N N N 42.903 4.957 113.858 -1.608 2.618 -2.271 O LSW 3
LSW CA CA C 0 1 N N S N N N 43.565 7.210 114.356 -1.717 0.495 -1.255 CA LSW 4
LSW CB CB C 0 1 N N N N N N 44.216 7.289 115.740 -3.180 0.050 -1.206 CB LSW 5
LSW NAA NAA N 0 1 N N N N N N 40.867 14.530 111.814 0.568 7.268 1.415 NAA LSW 6
LSW OAC OAC O 0 1 N N N N N N 45.861 9.169 108.727 1.441 -0.435 3.889 OAC LSW 7
LSW OAD OAD O 0 1 N N N N N N 44.526 8.406 111.917 -0.460 -0.941 1.210 OAD LSW 8
LSW OAF OAF O 0 1 N N N N N N 44.072 10.238 109.453 2.071 -2.517 4.278 OAF LSW 9
LSW CAG CAG C 0 1 Y N N N N N 46.910 6.011 119.911 -7.444 -2.233 0.043 CAG LSW 10
LSW CAH CAH C 0 1 Y N N N N N 46.583 4.815 119.281 -6.543 -2.907 -0.760 CAH LSW 11
LSW CAI CAI C 0 1 Y N N N N N 46.623 7.222 119.290 -7.025 -1.151 0.796 CAI LSW 12
LSW CAJ CAJ C 0 1 Y N N N N N 38.280 9.449 108.181 4.345 -0.007 -3.234 CAJ LSW 13
LSW CAK CAK C 0 1 Y N N N N N 39.473 10.201 108.216 4.245 0.711 -2.050 CAK LSW 14
LSW CAL CAL C 0 1 Y N N N N N 45.971 4.833 118.033 -5.221 -2.504 -0.805 CAL LSW 15
LSW CAM CAM C 0 1 Y N N N N N 46.012 7.238 118.041 -5.703 -0.749 0.751 CAM LSW 16
LSW CAN CAN C 0 1 Y N N N N N 38.297 8.078 108.095 4.220 -1.379 -3.236 CAN LSW 17
LSW CAO CAO C 0 1 Y N N N N N 40.716 9.572 108.162 4.027 0.068 -0.864 CAO LSW 18
LSW CAP CAP C 0 1 Y N N N N N 41.241 5.980 107.921 3.626 -3.513 -0.371 CAP LSW 19
LSW CAQ CAQ C 0 1 N N N N N N 41.733 13.361 111.452 0.247 6.130 0.544 CAQ LSW 20
LSW CAR CAR C 0 1 N N N N N N 41.076 12.026 111.844 0.528 4.823 1.287 CAR LSW 21
LSW CAS CAS C 0 1 N N N N N N 42.097 10.944 112.260 0.194 3.638 0.379 CAS LSW 22
LSW CAT CAT C 0 1 N N N N N N 45.071 6.047 116.006 -3.360 -0.988 -0.096 CAT LSW 23
LSW CAU CAU C 0 1 N N N N N N 41.373 9.592 112.446 0.475 2.330 1.123 CAU LSW 24
LSW CAW CAW C 0 1 N N N N N N 43.274 7.526 107.950 3.487 -2.018 1.685 CAW LSW 25
LSW NAX NAX N 0 1 N N N N N N 42.939 7.953 110.388 1.692 -0.407 1.280 NAX LSW 26
LSW CBB CBB C 0 1 N N N N N N 44.680 9.186 109.157 1.825 -1.492 3.447 CBB LSW 27
LSW CBC CBC C 0 1 N N N N N N 43.339 8.248 111.629 0.414 -0.142 0.946 CBC LSW 28
LSW CBD CBD C 0 1 Y N N N N N 45.686 6.043 117.409 -4.800 -1.427 -0.047 CBD LSW 29
LSW CBE CBE C 0 1 Y N N N N N 41.826 7.220 107.988 3.663 -2.306 0.216 CBE LSW 30
LSW CBF CBF C 0 1 Y N N N N N 39.543 7.449 108.039 3.992 -2.054 -2.040 CBF LSW 31
LSW CBG CBG C 0 1 Y N N N N N 40.760 8.173 108.069 3.903 -1.322 -0.842 CBG LSW 32
LSW CBI CBI C 0 1 N N S N N N 42.270 8.369 112.718 0.070 1.146 0.243 CBI LSW 33
LSW CBJ CBJ C 0 1 N N S N N N 43.924 7.859 109.302 2.026 -1.659 1.963 CBJ LSW 34
LSW OXT OXT O 0 1 N N N N N N 41.409 6.246 114.800 -1.234 0.923 -3.638 OXT LSW 35
LSW NXZ NXZ N 0 1 Y N N N N N 39.852 6.116 107.951 3.826 -3.382 -1.719 NXZ LSW 36
LSW HN HN H 0 1 N N N N N N 43.552 9.221 114.039 -1.892 0.817 0.771 HN LSW 37
LSW HA HA H 0 1 N N N N N N 44.345 7.030 113.601 -1.075 -0.378 -1.368 HA LSW 38
LSW HB HB H 0 1 N N N N N N 44.856 8.183 115.786 -3.816 0.912 -1.003 HB LSW 39
LSW HBA HBA H 0 1 N N N N N N 43.428 7.354 116.505 -3.458 -0.390 -2.163 HBA LSW 40
LSW HNAA HNAA H 0 0 N N N N N N 41.323 15.379 111.546 1.523 7.218 1.739 HNAA LSW 41
LSW HNAB HNAB H 0 0 N N N N N N 39.992 14.457 111.336 0.391 8.144 0.947 HNAB LSW 42
LSW HOAF HOAF H 0 0 N N N N N N 44.639 10.985 109.301 1.927 -2.361 5.222 HOAF LSW 43
LSW HAG HAG H 0 1 N N N N N N 47.386 5.999 120.880 -8.476 -2.548 0.079 HAG LSW 44
LSW HAH HAH H 0 1 N N N N N N 46.804 3.873 119.761 -6.871 -3.749 -1.351 HAH LSW 45
LSW HAI HAI H 0 1 N N N N N N 46.875 8.152 119.779 -7.730 -0.622 1.419 HAI LSW 46
LSW HAJ HAJ H 0 1 N N N N N N 37.331 9.963 108.223 4.518 0.515 -4.163 HAJ LSW 47
LSW HAK HAK H 0 1 N N N N N N 39.423 11.278 108.286 4.342 1.787 -2.066 HAK LSW 48
LSW HAL HAL H 0 1 N N N N N N 45.716 3.904 117.546 -4.517 -3.031 -1.432 HAL LSW 49
LSW HAM HAM H 0 1 N N N N N N 45.790 8.180 117.561 -5.375 0.095 1.339 HAM LSW 50
LSW HAN HAN H 0 1 N N N N N N 37.380 7.507 108.072 4.298 -1.929 -4.162 HAN LSW 51
LSW HAO HAO H 0 1 N N N N N N 41.627 10.151 108.191 3.952 0.634 0.053 HAO LSW 52
LSW HAP HAP H 0 1 N N N N N N 41.774 5.043 107.855 3.469 -4.449 0.144 HAP LSW 53
LSW HAQ HAQ H 0 1 N N N N N N 41.900 13.367 110.365 -0.806 6.171 0.266 HAQ LSW 54
LSW HAQA HAQA H 0 0 N N N N N N 42.692 13.453 111.983 0.862 6.176 -0.355 HAQA LSW 55
LSW HAR HAR H 0 1 N N N N N N 40.403 12.210 112.695 1.582 4.782 1.565 HAR LSW 56
LSW HARA HARA H 0 0 N N N N N N 40.512 11.652 110.977 -0.086 4.777 2.186 HARA LSW 57
LSW HAS HAS H 0 1 N N N N N N 42.863 10.844 111.477 -0.859 3.678 0.102 HAS LSW 58
LSW HASA HASA H 0 0 N N N N N N 42.575 11.236 113.207 0.809 3.684 -0.519 HASA LSW 59
LSW HAT HAT H 0 1 N N N N N N 44.433 5.157 115.904 -2.724 -1.850 -0.298 HAT LSW 60
LSW HATA HATA H 0 0 N N N N N N 45.887 6.022 115.269 -3.081 -0.548 0.862 HATA LSW 61
LSW HAU HAU H 0 1 N N N N N N 40.698 9.699 113.308 1.538 2.265 1.354 HAU LSW 62
LSW HAUA HAUA H 0 0 N N N N N N 40.817 9.389 111.519 -0.100 2.308 2.049 HAUA LSW 63
LSW HAW HAW H 0 1 N N N N N N 43.787 6.640 107.548 3.762 -2.901 2.263 HAW LSW 64
LSW HAWA HAWA H 0 0 N N N N N N 43.408 8.400 107.296 4.128 -1.183 1.970 HAWA LSW 65
LSW HNAX HNAX H 0 0 N N N N N N 41.970 7.796 110.199 2.391 0.231 1.069 HNAX LSW 66
LSW HBI HBI H 0 1 N N N N N N 41.649 7.461 112.700 0.607 1.197 -0.704 HBI LSW 67
LSW HBJ HBJ H 0 1 N N N N N N 44.612 7.044 109.571 1.380 -2.457 1.597 HBJ LSW 68
LSW HOXT HOXT H 0 0 N N N N N N 40.901 5.446 114.725 -1.112 1.557 -4.357 HOXT LSW 69
LSW HNXZ HNXZ H 0 0 N N N N N N 39.192 5.366 107.914 3.843 -4.116 -2.353 HNXZ LSW 70
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
LSW O C DOUB N N 1
LSW C CA SING N N 2
LSW C OXT SING N N 3
LSW CBI N SING N N 4
LSW N CA SING N N 5
LSW N HN SING N N 6
LSW CA CB SING N N 7
LSW CA HA SING N N 8
LSW CB CAT SING N N 9
LSW CB HB SING N N 10
LSW CB HBA SING N N 11
LSW CAQ NAA SING N N 12
LSW NAA HNAA SING N N 13
LSW NAA HNAB SING N N 14
LSW OAC CBB DOUB N N 15
LSW CBC OAD DOUB N N 16
LSW CBB OAF SING N N 17
LSW OAF HOAF SING N N 18
LSW CAH CAG DOUB Y N 19
LSW CAI CAG SING Y N 20
LSW CAG HAG SING N N 21
LSW CAL CAH SING Y N 22
LSW CAH HAH SING N N 23
LSW CAM CAI DOUB Y N 24
LSW CAI HAI SING N N 25
LSW CAN CAJ DOUB Y N 26
LSW CAJ CAK SING Y N 27
LSW CAJ HAJ SING N N 28
LSW CAO CAK DOUB Y N 29
LSW CAK HAK SING N N 30
LSW CBD CAL DOUB Y N 31
LSW CAL HAL SING N N 32
LSW CBD CAM SING Y N 33
LSW CAM HAM SING N N 34
LSW CBF CAN SING Y N 35
LSW CAN HAN SING N N 36
LSW CBG CAO SING Y N 37
LSW CAO HAO SING N N 38
LSW CAP NXZ SING Y N 39
LSW CAP CBE DOUB Y N 40
LSW CAP HAP SING N N 41
LSW CAQ CAR SING N N 42
LSW CAQ HAQ SING N N 43
LSW CAQ HAQA SING N N 44
LSW CAR CAS SING N N 45
LSW CAR HAR SING N N 46
LSW CAR HARA SING N N 47
LSW CAS CAU SING N N 48
LSW CAS HAS SING N N 49
LSW CAS HASA SING N N 50
LSW CAT CBD SING N N 51
LSW CAT HAT SING N N 52
LSW CAT HATA SING N N 53
LSW CAU CBI SING N N 54
LSW CAU HAU SING N N 55
LSW CAU HAUA SING N N 56
LSW CAW CBE SING N N 57
LSW CAW CBJ SING N N 58
LSW CAW HAW SING N N 59
LSW CAW HAWA SING N N 60
LSW CBJ NAX SING N N 61
LSW NAX CBC SING N N 62
LSW NAX HNAX SING N N 63
LSW CBB CBJ SING N N 64
LSW CBC CBI SING N N 65
LSW CBE CBG SING Y N 66
LSW NXZ CBF SING Y N 67
LSW CBF CBG DOUB Y N 68
LSW CBI HBI SING N N 69
LSW CBJ HBJ SING N N 70
LSW OXT HOXT SING N N 71
LSW NXZ HNXZ SING N N 72
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
LSW SMILES_CANONICAL CACTVS 3.352 NCCCC[C@H](N[C@@H](CCc1ccccc1)C(O)=O)C(=O)N[C@@H](Cc2c[nH]c3ccccc23)C(O)=O
LSW SMILES CACTVS 3.352 NCCCC[CH](N[CH](CCc1ccccc1)C(O)=O)C(=O)N[CH](Cc2c[nH]c3ccccc23)C(O)=O
LSW SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 c1ccc(cc1)CC[C@@H](C(=O)O)N[C@@H](CCCCN)C(=O)N[C@@H](Cc2c[nH]c3c2cccc3)C(=O)O
LSW SMILES "OpenEye OEToolkits" 1.7.0 c1ccc(cc1)CCC(C(=O)O)NC(CCCCN)C(=O)NC(Cc2c[nH]c3c2cccc3)C(=O)O
LSW InChI InChI 1.03 InChI=1S/C27H34N4O5/c28-15-7-6-12-22(30-23(26(33)34)14-13-18-8-2-1-3-9-18)25(32)31-24(27(35)36)16-19-17-29-21-11-5-4-10-20(19)21/h1-5,8-11,17,22-24,29-30H,6-7,12-16,28H2,(H,31,32)(H,33,34)(H,35,36)/t22-,23-,24-/m0/s1
LSW InChIKey InChI 1.03 JXNGDSIPMBNTNL-HJOGWXRNSA-N
#
_pdbx_chem_comp_identifier.comp_id LSW
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 1.6.1
_pdbx_chem_comp_identifier.identifier
"(2S)-2-[[(2S)-6-azanyl-1-[[(2S)-1-hydroxy-3-(1H-indol-3-yl)-1-oxo-propan-2-yl]amino]-1-oxo-hexan-2-yl]amino]-4-phenyl-butanoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
LSW 'Create component' 2010-02-23 RCSB
LSW 'Modify aromatic_flag' 2011-06-04 RCSB
LSW 'Modify descriptor' 2011-06-04 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
LSW C C 14.752 2.174 1
LSW N N 12.819 0.439 2
LSW O O 15.218 3.599 3
LSW CA C 13.285 1.864 4
LSW CB C 12.283 2.981 5
LSW NAA N 5.410 2.860 6
LSW OAC O 11.421 -3.839 7
LSW OAD O 11.887 -2.413 8
LSW OAF O 9.487 -5.574 9
LSW CAG C 9.744 7.756 10
LSW CAH C 9.278 6.330 11
LSW CAI C 11.211 8.065 12
LSW CAJ C 3.000 -6.724 13
LSW CAK C 3.000 -5.224 14
LSW CAL C 10.279 5.213 15
LSW CAM C 12.213 6.949 16
LSW CAN C 4.299 -7.474 17
LSW CAO C 4.299 -4.474 18
LSW CAP C 7.893 -5.974 19
LSW CAQ C 6.412 1.743 20
LSW CAR C 7.880 2.053 21
LSW CAS C 8.881 0.936 22
LSW CAT C 12.749 4.406 23
LSW CAU C 10.349 1.246 24
LSW CAW C 7.483 -3.341 25
LSW NAX N 9.417 -1.606 26
LSW CBB C 9.953 -4.148 27
LSW CBC C 10.885 -1.297 28
LSW CBD C 11.747 5.523 29
LSW CBE C 7.018 -4.767 30
LSW CBF C 5.598 -6.724 31
LSW CBG C 5.598 -5.224 32
LSW CBI C 11.351 0.129 33
LSW CBJ C 8.951 -3.032 34
LSW OXT O 15.754 1.057 35
LSW NXZ N 7.018 -7.181 36
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
LSW O C DOUBLE NONE 1
LSW C CA SINGLE NONE 2
LSW C OXT SINGLE NONE 3
LSW CBI N SINGLE NONE 4
LSW N CA SINGLE NONE 5
LSW CA CB SINGLE BEGINWEDGE 6
LSW CB CAT SINGLE NONE 7
LSW CAQ NAA SINGLE NONE 8
LSW OAC CBB DOUBLE NONE 9
LSW CBC OAD DOUBLE NONE 10
LSW CBB OAF SINGLE NONE 11
LSW CAH CAG DOUBLE NONE 12
LSW CAI CAG SINGLE NONE 13
LSW CAL CAH SINGLE NONE 14
LSW CAM CAI DOUBLE NONE 15
LSW CAN CAJ DOUBLE NONE 16
LSW CAJ CAK SINGLE NONE 17
LSW CAO CAK DOUBLE NONE 18
LSW CBD CAL DOUBLE NONE 19
LSW CBD CAM SINGLE NONE 20
LSW CBF CAN SINGLE NONE 21
LSW CBG CAO SINGLE NONE 22
LSW CAP NXZ SINGLE NONE 23
LSW CAP CBE DOUBLE NONE 24
LSW CAQ CAR SINGLE NONE 25
LSW CAR CAS SINGLE NONE 26
LSW CAS CAU SINGLE NONE 27
LSW CAT CBD SINGLE NONE 28
LSW CBI CAU SINGLE BEGINDASH 29
LSW CAW CBE SINGLE NONE 30
LSW CBJ CAW SINGLE BEGINDASH 31
LSW CBJ NAX SINGLE NONE 32
LSW NAX CBC SINGLE NONE 33
LSW CBB CBJ SINGLE NONE 34
LSW CBC CBI SINGLE NONE 35
LSW CBE CBG SINGLE NONE 36
LSW NXZ CBF SINGLE NONE 37
LSW CBF CBG DOUBLE NONE 38
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
LSW MurckoScaffold S1 scaffold 'O=C(CNCCCc1ccccc1)NCCc1c[nH]c2ccccc12' InChI=1S/C21H25N3O/c25-21(16-22-13-6-9-17-7-2-1-3-8-17)23-14-12-18-15-24-20-11-5-4-10-19(18)20/h1-5,7-8,10-11,15,22,24H,6,9,12-14,16H2,(H,23,25) BHNRNSIDIOYLMB-UHFFFAOYSA-N
LSW amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
LSW indole F2 fragment 'c1ccc2[nH]ccc2c1' InChI=1S/C8H7N/c1-2-4-8-7(3-1)5-6-9-8/h1-6,9H SIKJAQJRHWYJAI-UHFFFAOYSA-N
LSW peptide F3 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
LSW phenyl F4 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
LSW pyrrole F5 fragment 'c1cc[nH]c1' InChI=1S/C4H5N/c1-2-4-5-3-1/h1-5H KAESVJOAVNADME-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
LSW N S1 1
LSW CA S1 1
LSW CB S1 1
LSW OAD S1 1
LSW CAG S1 1
LSW CAH S1 1
LSW CAI S1 1
LSW CAJ S1 1
LSW CAK S1 1
LSW CAL S1 1
LSW CAM S1 1
LSW CAN S1 1
LSW CAO S1 1
LSW CAP S1 1
LSW CAT S1 1
LSW CAW S1 1
LSW NAX S1 1
LSW CBC S1 1
LSW CBD S1 1
LSW CBE S1 1
LSW CBF S1 1
LSW CBG S1 1
LSW CBI S1 1
LSW CBJ S1 1
LSW NXZ S1 1
LSW NAX F1 1
LSW CBC F1 1
LSW OAD F1 1
LSW CBI F1 1
LSW CBF F2 1
LSW CBG F2 1
LSW CBE F2 1
LSW CAP F2 1
LSW NXZ F2 1
LSW CAO F2 1
LSW CAK F2 1
LSW CAJ F2 1
LSW CAN F2 1
LSW O F3 1
LSW C F3 1
LSW CA F3 1
LSW N F3 1
LSW OAC F3 2
LSW CBB F3 2
LSW CBJ F3 2
LSW NAX F3 2
LSW OAD F3 3
LSW CBC F3 3
LSW CBI F3 3
LSW N F3 3
LSW CAG F4 1
LSW CAH F4 1
LSW CAL F4 1
LSW CBD F4 1
LSW CAM F4 1
LSW CAI F4 1
LSW CAJ F4 2
LSW CAN F4 2
LSW CBF F4 2
LSW CBG F4 2
LSW CAO F4 2
LSW CAK F4 2
LSW CAP F5 1
LSW CBE F5 1
LSW CBG F5 1
LSW CBF F5 1
LSW NXZ F5 1
#
_pdbe_chem_comp_rdkit_properties.comp_id LSW
_pdbe_chem_comp_rdkit_properties.exactmw 494.253
_pdbe_chem_comp_rdkit_properties.amw 494.592
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 9
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 7
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 16
_pdbe_chem_comp_rdkit_properties.NumHBD 6
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 36
_pdbe_chem_comp_rdkit_properties.NumAtoms 70
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 9
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.370
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 3
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 257.869
_pdbe_chem_comp_rdkit_properties.tpsa 157.540
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.915
_pdbe_chem_comp_rdkit_properties.CrippenMR 134.847
_pdbe_chem_comp_rdkit_properties.chi0v 17.330
_pdbe_chem_comp_rdkit_properties.chi1v 9.086
_pdbe_chem_comp_rdkit_properties.chi2v 3.572
_pdbe_chem_comp_rdkit_properties.chi3v 3.572
_pdbe_chem_comp_rdkit_properties.chi4v 2.145
_pdbe_chem_comp_rdkit_properties.chi0n 51.330
_pdbe_chem_comp_rdkit_properties.chi1n 25.638
_pdbe_chem_comp_rdkit_properties.chi2n 3.572
_pdbe_chem_comp_rdkit_properties.chi3n 3.572
_pdbe_chem_comp_rdkit_properties.chi4n 2.145
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.690
_pdbe_chem_comp_rdkit_properties.kappa1 6.788
_pdbe_chem_comp_rdkit_properties.kappa2 13.412
_pdbe_chem_comp_rdkit_properties.kappa3 7.658
_pdbe_chem_comp_rdkit_properties.Phi 2.529
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
LSW UniChem ChEMBL CHEMBL212710
LSW UniChem PDBe LSW
LSW UniChem ZINC ZINC000034867476
LSW UniChem SureChEMBL SCHEMBL12433272
LSW UniChem PubChem 72200141
LSW UniChem BindingDb 50189452
LSW UniChem 'PubChem TPHARMA' 24383283
LSW UniChem PubChem 16007169
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
LSW C -2.474 -1.254 2.482 ETKDGv3 1
LSW N -1.902 -1.744 0.129 ETKDGv3 2
LSW O -3.194 -2.263 2.715 ETKDGv3 3
LSW CA -2.359 -0.707 1.081 ETKDGv3 4
LSW CB -3.744 -0.160 0.663 ETKDGv3 5
LSW NAA -3.048 -7.374 0.968 ETKDGv3 6
LSW OAC 0.555 1.941 0.972 ETKDGv3 7
LSW OAD 1.061 -1.567 1.926 ETKDGv3 8
LSW OAF 2.576 1.745 2.043 ETKDGv3 9
LSW CAG -1.213 4.052 -0.906 ETKDGv3 10
LSW CAH -0.956 2.991 -1.680 ETKDGv3 11
LSW CAI -2.352 4.022 0.033 ETKDGv3 12
LSW CAJ 4.692 5.767 -0.097 ETKDGv3 13
LSW CAK 3.247 5.455 -0.303 ETKDGv3 14
LSW CAL -1.808 1.786 -1.593 ETKDGv3 15
LSW CAM -3.135 2.938 0.104 ETKDGv3 16
LSW CAN 5.623 4.805 -0.237 ETKDGv3 17
LSW CAO 2.859 4.210 -0.632 ETKDGv3 18
LSW CAP 5.033 1.259 -1.052 ETKDGv3 19
LSW CAQ -2.693 -6.528 -0.166 ETKDGv3 20
LSW CAR -1.726 -5.427 0.279 ETKDGv3 21
LSW CAS -1.372 -4.497 -0.891 ETKDGv3 22
LSW CAT -3.773 0.559 -0.697 ETKDGv3 23
LSW CAU -0.262 -3.489 -0.541 ETKDGv3 24
LSW CAW 2.534 0.953 -1.269 ETKDGv3 25
LSW NAX 0.934 -0.587 -0.191 ETKDGv3 26
LSW CBB 1.676 1.370 1.051 ETKDGv3 27
LSW CBC 0.483 -1.517 0.806 ETKDGv3 28
LSW CBD -2.856 1.755 -0.750 ETKDGv3 29
LSW CBE 3.794 1.751 -1.087 ETKDGv3 30
LSW CBF 5.173 3.451 -0.599 ETKDGv3 31
LSW CBG 3.897 3.175 -0.782 ETKDGv3 32
LSW CBI -0.670 -2.458 0.534 ETKDGv3 33
LSW CBJ 2.066 0.315 0.051 ETKDGv3 34
LSW OXT -1.785 -0.638 3.522 ETKDGv3 35
LSW NXZ 5.975 2.291 -0.758 ETKDGv3 36
LSW HN -1.723 -1.289 -0.796 ETKDGv3 37
LSW HA -1.636 0.137 1.093 ETKDGv3 38
LSW HB -4.110 0.544 1.443 ETKDGv3 39
LSW HBA -4.469 -1.002 0.620 ETKDGv3 40
LSW HNAA -2.205 -7.932 1.236 ETKDGv3 41
LSW HNAB -3.766 -8.060 0.640 ETKDGv3 42
LSW HOAF 2.340 2.469 2.711 ETKDGv3 43
LSW HAG -0.592 4.935 -0.970 ETKDGv3 44
LSW HAH -0.130 3.017 -2.378 ETKDGv3 45
LSW HAI -2.557 4.882 0.656 ETKDGv3 46
LSW HAJ 4.990 6.773 0.169 ETKDGv3 47
LSW HAK 2.508 6.237 -0.183 ETKDGv3 48
LSW HAL -1.583 0.941 -2.232 ETKDGv3 49
LSW HAM -3.976 2.931 0.785 ETKDGv3 50
LSW HAN 6.673 5.020 -0.085 ETKDGv3 51
LSW HAO 1.814 3.975 -0.777 ETKDGv3 52
LSW HAP 5.296 0.218 -1.193 ETKDGv3 53
LSW HAQ -2.225 -7.146 -0.965 ETKDGv3 54
LSW HAQA -3.616 -6.062 -0.576 ETKDGv3 55
LSW HAR -2.209 -4.844 1.092 ETKDGv3 56
LSW HARA -0.798 -5.895 0.677 ETKDGv3 57
LSW HAS -2.283 -3.959 -1.232 ETKDGv3 58
LSW HASA -1.012 -5.113 -1.744 ETKDGv3 59
LSW HAT -4.810 0.914 -0.879 ETKDGv3 60
LSW HATA -3.552 -0.161 -1.514 ETKDGv3 61
LSW HAU 0.019 -2.955 -1.475 ETKDGv3 62
LSW HAUA 0.639 -4.045 -0.198 ETKDGv3 63
LSW HAW 2.726 0.151 -2.015 ETKDGv3 64
LSW HAWA 1.738 1.605 -1.684 ETKDGv3 65
LSW HNAX 0.454 -0.567 -1.119 ETKDGv3 66
LSW HBI -0.868 -3.028 1.466 ETKDGv3 67
LSW HBJ 2.910 -0.282 0.464 ETKDGv3 68
LSW HOXT -1.850 -0.992 4.469 ETKDGv3 69
LSW HNXZ 7.008 2.200 -0.635 ETKDGv3 70
#