data_M8S
#
_chem_comp.id M8S
_chem_comp.name 2-(2,4-dioxo-1,3-diazaspiro[4.6]undecan-3-yl)-N-(4-sulfamoylphenyl)acetamide
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C17 H22 N4 O5 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2019-03-27
_chem_comp.pdbx_modified_date 2019-06-07
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 394.445
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code M8S
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6OE0
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
M8S C16 C1 C 0 1 Y N N N N N -0.869 4.553 84.636 -2.400 0.066 0.654 C16 M8S 1
M8S C24 C2 C 0 1 Y N N N N N -3.088 5.423 84.741 -3.412 1.881 -0.553 C24 M8S 2
M8S C17 C3 C 0 1 Y N N N N N -1.245 3.437 85.392 -3.582 -0.644 0.572 C17 M8S 3
M8S C23 C4 C 0 1 Y N N N N N -3.439 4.330 85.491 -4.588 1.161 -0.641 C23 M8S 4
M8S C15 C5 C 0 1 Y N N N N N -1.799 5.524 84.301 -2.311 1.332 0.091 C15 M8S 5
M8S C18 C6 C 0 1 Y N N N N N -2.546 3.353 85.815 -4.674 -0.097 -0.075 C18 M8S 6
M8S C2 C7 C 0 1 N N N N N N -2.904 9.750 80.288 3.145 0.942 -0.843 C2 M8S 7
M8S C26 C8 C 0 1 N N N N N N -2.275 7.686 79.546 2.995 0.604 1.348 C26 M8S 8
M8S C13 C9 C 0 1 N N N N N N -2.195 7.368 82.612 0.066 1.406 0.152 C13 M8S 9
M8S C6 C10 C 0 1 N N N N N N -6.342 10.960 77.543 5.887 -2.654 -0.048 C6 M8S 10
M8S C7 C11 C 0 1 N N N N N N -5.188 11.716 76.955 6.597 -1.397 0.493 C7 M8S 11
M8S C5 C12 C 0 1 N N N N N N -5.912 9.558 77.895 4.445 -2.483 -0.150 C5 M8S 12
M8S C8 C13 C 0 1 N N N N N N -3.987 11.890 77.850 6.757 -0.414 -0.636 C8 M8S 13
M8S C4 C14 C 0 1 N N N N N N -5.071 9.471 79.153 4.057 -1.356 -1.132 C4 M8S 14
M8S C9 C15 C 0 1 N N N N N N -3.121 10.667 78.017 5.605 0.607 -0.690 C9 M8S 15
M8S C3 C16 C 0 1 N N N N N N -3.587 9.592 78.981 4.228 -0.035 -0.434 C3 M8S 16
M8S C12 C17 C 0 1 N N N N N N -1.386 8.368 81.756 1.348 2.170 0.360 C12 M8S 17
M8S N10 N1 N 0 1 N N N N N N -3.139 8.260 78.646 4.036 -0.182 1.019 N10 M8S 18
M8S N11 N2 N 0 1 N N N N N N -2.085 8.660 80.516 2.483 1.246 0.291 N11 M8S 19
M8S N21 N3 N 0 1 N N N N N N -2.493 0.552 86.113 -7.082 -0.614 1.153 N21 M8S 20
M8S N14 N4 N 0 1 N N N N N N -1.390 6.645 83.491 -1.116 2.054 0.174 N14 M8S 21
M8S O1 O1 O 0 1 N N N N N N -3.021 10.741 80.996 2.924 1.365 -1.957 O1 M8S 22
M8S O27 O2 O 0 1 N N N N N N -1.742 6.580 79.449 2.567 0.718 2.479 O27 M8S 23
M8S O25 O3 O 0 1 N N N N N N -3.410 7.272 82.472 0.097 0.208 -0.035 O25 M8S 24
M8S O20 O4 O 0 1 N N N N N N -2.670 2.040 88.118 -6.882 -0.494 -1.303 O20 M8S 25
M8S O22 O5 O 0 1 N N N N N N -4.565 2.049 86.655 -5.832 -2.377 -0.038 O22 M8S 26
M8S S19 S1 S 0 1 N N N N N N -3.103 1.959 86.758 -6.180 -1.007 -0.179 S19 M8S 27
M8S H1 H1 H 0 1 N N N N N N 0.155 4.658 84.311 -1.546 -0.361 1.160 H1 M8S 28
M8S H2 H2 H 0 1 N N N N N N -3.814 6.186 84.504 -3.345 2.864 -0.996 H2 M8S 29
M8S H3 H3 H 0 1 N N N N N N -0.531 2.664 85.635 -3.652 -1.627 1.013 H3 M8S 30
M8S H4 H4 H 0 1 N N N N N N -4.458 4.240 85.837 -5.441 1.582 -1.153 H4 M8S 31
M8S H5 H5 H 0 1 N N N N N N -6.689 11.474 78.451 6.285 -2.885 -1.036 H5 M8S 32
M8S H6 H6 H 0 1 N N N N N N -7.161 10.917 76.810 6.096 -3.489 0.619 H6 M8S 33
M8S H7 H7 H 0 1 N N N N N N -4.860 11.180 76.052 5.996 -0.949 1.285 H7 M8S 34
M8S H8 H8 H 0 1 N N N N N N -5.548 12.717 76.677 7.577 -1.669 0.883 H8 M8S 35
M8S H9 H9 H 0 1 N N N N N N -6.814 8.945 78.038 4.001 -3.418 -0.492 H9 M8S 36
M8S H10 H10 H 0 1 N N N N N N -5.324 9.155 77.057 4.046 -2.245 0.836 H10 M8S 37
M8S H11 H11 H 0 1 N N N N N N -3.363 12.692 77.429 7.698 0.120 -0.508 H11 M8S 38
M8S H12 H12 H 0 1 N N N N N N -4.346 12.190 78.846 6.788 -0.961 -1.578 H12 M8S 39
M8S H13 H13 H 0 1 N N N N N N -5.395 10.278 79.827 4.705 -1.394 -2.007 H13 M8S 40
M8S H14 H14 H 0 1 N N N N N N -5.274 8.497 79.623 3.018 -1.477 -1.436 H14 M8S 41
M8S H15 H15 H 0 1 N N N N N N -3.022 10.198 77.027 5.781 1.375 0.063 H15 M8S 42
M8S H16 H16 H 0 1 N N N N N N -2.134 11.009 78.361 5.597 1.077 -1.673 H16 M8S 43
M8S H17 H17 H 0 1 N N N N N N -0.403 7.933 81.523 1.450 2.928 -0.417 H17 M8S 44
M8S H18 H18 H 0 1 N N N N N N -1.249 9.301 82.322 1.330 2.651 1.337 H18 M8S 45
M8S H19 H19 H 0 1 N N N N N N -3.437 7.789 77.816 4.558 -0.736 1.620 H19 M8S 46
M8S H20 H20 H 0 1 N N N N N N -2.812 -0.228 86.651 -6.737 0.016 1.805 H20 M8S 47
M8S H21 H21 H 0 1 N N N N N N -2.806 0.455 85.168 -7.956 -1.015 1.283 H21 M8S 48
M8S H22 H22 H 0 1 N N N N N N -0.435 6.932 83.567 -1.137 3.021 0.246 H22 M8S 49
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
M8S C7 C6 SING N N 1
M8S C7 C8 SING N N 2
M8S C6 C5 SING N N 3
M8S C8 C9 SING N N 4
M8S C5 C4 SING N N 5
M8S C9 C3 SING N N 6
M8S N10 C3 SING N N 7
M8S N10 C26 SING N N 8
M8S C3 C4 SING N N 9
M8S C3 C2 SING N N 10
M8S O27 C26 DOUB N N 11
M8S C26 N11 SING N N 12
M8S C2 N11 SING N N 13
M8S C2 O1 DOUB N N 14
M8S N11 C12 SING N N 15
M8S C12 C13 SING N N 16
M8S O25 C13 DOUB N N 17
M8S C13 N14 SING N N 18
M8S N14 C15 SING N N 19
M8S C15 C16 DOUB Y N 20
M8S C15 C24 SING Y N 21
M8S C16 C17 SING Y N 22
M8S C24 C23 DOUB Y N 23
M8S C17 C18 DOUB Y N 24
M8S C23 C18 SING Y N 25
M8S C18 S19 SING N N 26
M8S N21 S19 SING N N 27
M8S O22 S19 DOUB N N 28
M8S S19 O20 DOUB N N 29
M8S C16 H1 SING N N 30
M8S C24 H2 SING N N 31
M8S C17 H3 SING N N 32
M8S C23 H4 SING N N 33
M8S C6 H5 SING N N 34
M8S C6 H6 SING N N 35
M8S C7 H7 SING N N 36
M8S C7 H8 SING N N 37
M8S C5 H9 SING N N 38
M8S C5 H10 SING N N 39
M8S C8 H11 SING N N 40
M8S C8 H12 SING N N 41
M8S C4 H13 SING N N 42
M8S C4 H14 SING N N 43
M8S C9 H15 SING N N 44
M8S C9 H16 SING N N 45
M8S C12 H17 SING N N 46
M8S C12 H18 SING N N 47
M8S N10 H19 SING N N 48
M8S N21 H20 SING N N 49
M8S N21 H21 SING N N 50
M8S N14 H22 SING N N 51
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
M8S SMILES ACDLabs 12.01 c1cc(ccc1NC(CN3C(=O)C2(CCCCCC2)NC3=O)=O)S(N)(=O)=O
M8S InChI InChI 1.03 InChI=1S/C17H22N4O5S/c18-27(25,26)13-7-5-12(6-8-13)19-14(22)11-21-15(23)17(20-16(21)24)9-3-1-2-4-10-17/h5-8H,1-4,9-11H2,(H,19,22)(H,20,24)(H2,18,25,26)
M8S InChIKey InChI 1.03 WALKBCDYHSEIBJ-UHFFFAOYSA-N
M8S SMILES_CANONICAL CACTVS 3.385 N[S](=O)(=O)c1ccc(NC(=O)CN2C(=O)NC3(CCCCCC3)C2=O)cc1
M8S SMILES CACTVS 3.385 N[S](=O)(=O)c1ccc(NC(=O)CN2C(=O)NC3(CCCCCC3)C2=O)cc1
M8S SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 c1cc(ccc1NC(=O)CN2C(=O)C3(CCCCCC3)NC2=O)S(=O)(=O)N
M8S SMILES "OpenEye OEToolkits" 2.0.7 c1cc(ccc1NC(=O)CN2C(=O)C3(CCCCCC3)NC2=O)S(=O)(=O)N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
M8S "SYSTEMATIC NAME" ACDLabs 12.01 2-(2,4-dioxo-1,3-diazaspiro[4.6]undecan-3-yl)-N-(4-sulfamoylphenyl)acetamide
M8S "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 2-[2,4-bis(oxidanylidene)-1,3-diazaspiro[4.6]undecan-3-yl]-~{N}-(4-sulfamoylphenyl)ethanamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
M8S 'Create component' 2019-03-27 RCSB
M8S 'Initial release' 2019-06-12 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
M8S C16 C 14.975 1.810 1
M8S C24 C 13.919 -0.564 2
M8S C17 C 16.346 1.200 3
M8S C23 C 15.289 -1.174 4
M8S C15 C 13.762 0.928 5
M8S C18 C 16.503 -0.292 6
M8S C2 C 7.168 0.848 7
M8S C26 C 8.594 -1.115 8
M8S C13 C 11.178 0.656 9
M8S C6 C 3.000 0.385 10
M8S C7 C 3.000 -1.115 11
M8S C5 C 4.173 1.320 12
M8S C8 C 4.173 -2.050 13
M8S C4 C 5.635 0.986 14
M8S C9 C 5.635 -1.717 15
M8S C3 C 6.286 -0.365 16
M8S C12 C 9.808 1.267 17
M8S N10 N 7.168 -1.579 18
M8S N11 N 8.594 0.385 19
M8S N21 N 18.483 0.468 20
M8S N14 N 12.392 1.538 21
M8S O1 O 6.704 2.275 22
M8S O27 O 9.808 -1.997 23
M8S O25 O 11.335 -0.835 24
M8S O20 O 19.243 -1.512 25
M8S O22 O 17.263 -2.272 26
M8S S19 S 17.873 -0.902 27
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
M8S C7 C6 SINGLE NONE 1
M8S C7 C8 SINGLE NONE 2
M8S C6 C5 SINGLE NONE 3
M8S C8 C9 SINGLE NONE 4
M8S C5 C4 SINGLE NONE 5
M8S C9 C3 SINGLE NONE 6
M8S N10 C3 SINGLE NONE 7
M8S N10 C26 SINGLE NONE 8
M8S C3 C4 SINGLE NONE 9
M8S C3 C2 SINGLE NONE 10
M8S O27 C26 DOUBLE NONE 11
M8S C26 N11 SINGLE NONE 12
M8S C2 N11 SINGLE NONE 13
M8S C2 O1 DOUBLE NONE 14
M8S N11 C12 SINGLE NONE 15
M8S C12 C13 SINGLE NONE 16
M8S O25 C13 DOUBLE NONE 17
M8S C13 N14 SINGLE NONE 18
M8S N14 C15 SINGLE NONE 19
M8S C15 C16 DOUBLE NONE 20
M8S C15 C24 SINGLE NONE 21
M8S C16 C17 SINGLE NONE 22
M8S C24 C23 DOUBLE NONE 23
M8S C17 C18 DOUBLE NONE 24
M8S C23 C18 SINGLE NONE 25
M8S C18 S19 SINGLE NONE 26
M8S N21 S19 SINGLE NONE 27
M8S O22 S19 DOUBLE NONE 28
M8S S19 O20 DOUBLE NONE 29
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
M8S MurckoScaffold S1 scaffold O=C(CN1C(=O)NC2(CCCCCC2)C1=O)Nc1ccccc1 InChI=1S/C17H21N3O3/c21-14(18-13-8-4-3-5-9-13)12-20-15(22)17(19-16(20)23)10-6-1-2-7-11-17/h3-5,8-9H,1-2,6-7,10-12H2,(H,18,21)(H,19,23) AZIIMLLETPKQCQ-UHFFFAOYSA-N
M8S acetylurea F1 fragment O=C1CNC(=O)N1 InChI=1S/C3H4N2O2/c6-2-1-4-3(7)5-2/h1H2,(H2,4,5,6,7) WJRBRSLFGCUECM-UHFFFAOYSA-N
M8S amide F2 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
M8S peptide F3 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
M8S phenyl F4 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
M8S C16 S1 1
M8S C24 S1 1
M8S C17 S1 1
M8S C23 S1 1
M8S C15 S1 1
M8S C18 S1 1
M8S C2 S1 1
M8S C26 S1 1
M8S C13 S1 1
M8S C6 S1 1
M8S C7 S1 1
M8S C5 S1 1
M8S C8 S1 1
M8S C4 S1 1
M8S C9 S1 1
M8S C3 S1 1
M8S C12 S1 1
M8S N10 S1 1
M8S N11 S1 1
M8S N14 S1 1
M8S O1 S1 1
M8S O27 S1 1
M8S O25 S1 1
M8S C3 F1 1
M8S C2 F1 1
M8S O1 F1 1
M8S N11 F1 1
M8S C26 F1 1
M8S O27 F1 1
M8S N10 F1 1
M8S N11 F2 1
M8S C2 F2 1
M8S O1 F2 1
M8S C3 F2 1
M8S N14 F2 2
M8S C13 F2 2
M8S O25 F2 2
M8S C12 F2 2
M8S O1 F3 1
M8S C2 F3 1
M8S C3 F3 1
M8S N10 F3 1
M8S O25 F3 2
M8S C13 F3 2
M8S C12 F3 2
M8S N11 F3 2
M8S C16 F4 1
M8S C15 F4 1
M8S C24 F4 1
M8S C23 F4 1
M8S C18 F4 1
M8S C17 F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id M8S
_pdbe_chem_comp_rdkit_properties.exactmw 394.131
_pdbe_chem_comp_rdkit_properties.amw 394.453
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 9
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 4
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 5
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 27
_pdbe_chem_comp_rdkit_properties.NumAtoms 49
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 10
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 4
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.471
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 2
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 1
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 188.020
_pdbe_chem_comp_rdkit_properties.tpsa 138.670
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.429
_pdbe_chem_comp_rdkit_properties.CrippenMR 96.869
_pdbe_chem_comp_rdkit_properties.chi0v 13.555
_pdbe_chem_comp_rdkit_properties.chi1v 8.088
_pdbe_chem_comp_rdkit_properties.chi2v 3.629
_pdbe_chem_comp_rdkit_properties.chi3v 3.629
_pdbe_chem_comp_rdkit_properties.chi4v 2.150
_pdbe_chem_comp_rdkit_properties.chi0n 34.738
_pdbe_chem_comp_rdkit_properties.chi1n 17.437
_pdbe_chem_comp_rdkit_properties.chi2n 2.909
_pdbe_chem_comp_rdkit_properties.chi3n 2.909
_pdbe_chem_comp_rdkit_properties.chi4n 1.790
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.460
_pdbe_chem_comp_rdkit_properties.kappa1 5.771
_pdbe_chem_comp_rdkit_properties.kappa2 7.277
_pdbe_chem_comp_rdkit_properties.kappa3 4.112
_pdbe_chem_comp_rdkit_properties.Phi 1.556
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
M8S UniChem ChEMBL CHEMBL4473062
M8S UniChem PDBe M8S
M8S UniChem PubChem 138753317
M8S UniChem BindingDb 50513282
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
M8S C16 2.735 2.057 -0.894 ETKDGv3 1
M8S C24 2.570 -0.156 0.123 ETKDGv3 2
M8S C17 3.459 1.437 -2.023 ETKDGv3 3
M8S C23 3.217 -0.718 -0.905 ETKDGv3 4
M8S C15 2.324 1.311 0.145 ETKDGv3 5
M8S C18 3.687 0.115 -2.035 ETKDGv3 6
M8S C2 -1.549 0.943 1.666 ETKDGv3 7
M8S C26 -0.880 -0.668 3.059 ETKDGv3 8
M8S C13 1.499 1.374 2.536 ETKDGv3 9
M8S C6 -3.578 -0.424 -1.825 ETKDGv3 10
M8S C7 -4.065 -1.679 -1.078 ETKDGv3 11
M8S C5 -2.139 0.042 -1.485 ETKDGv3 12
M8S C8 -4.353 -1.475 0.427 ETKDGv3 13
M8S C4 -1.465 -0.645 -0.281 ETKDGv3 14
M8S C9 -3.657 -0.273 1.093 ETKDGv3 15
M8S C3 -2.112 -0.338 1.095 ETKDGv3 16
M8S C12 0.264 1.597 3.354 ETKDGv3 17
M8S N10 -1.656 -1.330 2.072 ETKDGv3 18
M8S N11 -0.809 0.734 2.867 ETKDGv3 19
M8S N21 6.258 -0.402 -3.156 ETKDGv3 20
M8S N14 1.590 1.927 1.216 ETKDGv3 21
M8S O1 -1.688 2.079 1.138 ETKDGv3 22
M8S O27 -0.285 -1.275 3.988 ETKDGv3 23
M8S O25 2.438 0.673 3.002 ETKDGv3 24
M8S O20 4.131 0.012 -4.669 ETKDGv3 25
M8S O22 4.250 -2.093 -3.436 ETKDGv3 26
M8S S19 4.558 -0.623 -3.375 ETKDGv3 27
M8S H1 2.549 3.123 -0.912 ETKDGv3 28
M8S H2 2.204 -0.788 0.921 ETKDGv3 29
M8S H3 3.801 2.063 -2.837 ETKDGv3 30
M8S H4 3.385 -1.787 -0.911 ETKDGv3 31
M8S H5 -4.296 0.407 -1.652 ETKDGv3 32
M8S H6 -3.626 -0.636 -2.915 ETKDGv3 33
M8S H7 -3.346 -2.512 -1.225 ETKDGv3 34
M8S H8 -5.006 -2.021 -1.563 ETKDGv3 35
M8S H9 -2.138 1.142 -1.329 ETKDGv3 36
M8S H10 -1.495 -0.144 -2.373 ETKDGv3 37
M8S H11 -4.092 -2.405 0.977 ETKDGv3 38
M8S H12 -5.448 -1.331 0.555 ETKDGv3 39
M8S H13 -1.423 -1.741 -0.450 ETKDGv3 40
M8S H14 -0.398 -0.328 -0.259 ETKDGv3 41
M8S H15 -4.010 -0.218 2.147 ETKDGv3 42
M8S H16 -4.003 0.669 0.617 ETKDGv3 43
M8S H17 -0.047 2.661 3.283 ETKDGv3 44
M8S H18 0.466 1.374 4.424 ETKDGv3 45
M8S H19 -1.813 -2.361 2.020 ETKDGv3 46
M8S H20 6.427 0.626 -3.089 ETKDGv3 47
M8S H21 6.500 -0.808 -2.224 ETKDGv3 48
M8S H22 1.064 2.809 1.019 ETKDGv3 49
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