data_MLO # _chem_comp.id MLO _chem_comp.name "5,5'-di(prop-2-en-1-yl)biphenyl-2,2'-diol" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H18 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms magnolol _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-03-23 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 266.334 _chem_comp.one_letter_code ? _chem_comp.three_letter_code MLO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3R5N _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal MLO CAA CAA C 0 1 N N N N N N 58.374 24.155 5.828 5.408 2.016 1.307 CAA MLO 1 MLO CAB CAB C 0 1 N N N N N N 60.762 21.572 -1.405 -4.063 3.455 -0.561 CAB MLO 2 MLO OAC OAC O 0 1 N N N N N N 53.163 22.159 1.620 0.549 -2.743 -1.225 OAC MLO 3 MLO OAD OAD O 0 1 N N N N N N 53.619 23.576 -0.216 -0.274 -2.353 1.623 OAD MLO 4 MLO CAE CAE C 0 1 N N N N N N 57.053 23.958 6.213 4.114 1.854 1.189 CAE MLO 5 MLO CAF CAF C 0 1 N N N N N N 59.678 21.845 -0.577 -4.223 2.293 0.024 CAF MLO 6 MLO CAG CAG C 0 1 Y N N N N N 53.365 22.851 3.869 2.579 -1.510 -1.340 CAG MLO 7 MLO CAH CAH C 0 1 Y N N N N N 55.629 23.457 -1.435 -2.527 -1.623 1.411 CAH MLO 8 MLO CAI CAI C 0 1 Y N N N N N 54.060 23.494 4.888 3.288 -0.352 -1.083 CAI MLO 9 MLO CAJ CAJ C 0 1 Y N N N N N 57.016 23.356 -1.500 -3.462 -0.793 0.821 CAJ MLO 10 MLO CAK CAK C 0 1 Y N N N N N 55.809 24.043 3.312 1.350 0.633 -0.074 CAK MLO 11 MLO CAL CAL C 0 1 Y N N N N N 57.100 23.287 0.912 -1.750 0.215 -0.519 CAL MLO 12 MLO CAM CAM C 0 1 N N N N N N 56.055 24.797 5.726 3.460 1.970 -0.164 CAM MLO 13 MLO CAN CAN C 0 1 N N N N N N 59.283 23.163 -0.379 -4.102 1.023 -0.777 CAN MLO 14 MLO CAO CAO C 0 1 Y N N N N N 53.887 22.801 2.575 1.247 -1.605 -0.972 CAO MLO 15 MLO CAP CAP C 0 1 Y N N N N N 54.975 23.476 -0.203 -1.195 -1.541 1.040 CAP MLO 16 MLO CAQ CAQ C 0 1 Y N N N N N 55.286 24.089 4.608 2.675 0.716 -0.452 CAQ MLO 17 MLO CAR CAR C 0 1 Y N N N N N 57.754 23.269 -0.321 -3.074 0.123 -0.140 CAR MLO 18 MLO CAS CAS C 0 1 Y N N N N N 55.119 23.403 2.276 0.623 -0.526 -0.339 CAS MLO 19 MLO CAT CAT C 0 1 Y N N N N N 55.706 23.385 0.994 -0.801 -0.620 0.065 CAT MLO 20 MLO HAA HAA H 0 1 N N N N N N 58.625 24.959 5.152 5.876 1.934 2.276 HAA MLO 21 MLO HAAA HAAA H 0 0 N N N N N N 59.149 23.505 6.205 6.008 2.228 0.434 HAAA MLO 22 MLO HAB HAB H 0 1 N N N N N N 61.290 22.381 -1.888 -4.150 4.365 0.014 HAB MLO 23 MLO HABA HABA H 0 0 N N N N N N 61.076 20.551 -1.565 -3.845 3.502 -1.617 HABA MLO 24 MLO HOAC HOAC H 0 0 N N N N N N 53.626 22.197 0.792 0.587 -3.395 -0.512 HOAC MLO 25 MLO HOAD HOAD H 0 0 N N N N N N 53.293 23.579 0.676 -0.145 -3.194 1.164 HOAD MLO 26 MLO HAE HAE H 0 1 N N N N N N 56.801 23.155 6.889 3.514 1.638 2.061 HAE MLO 27 MLO HAF HAF H 0 1 N N N N N N 59.147 21.039 -0.092 -4.442 2.247 1.081 HAF MLO 28 MLO HAG HAG H 0 1 N N N N N N 52.413 22.386 4.081 3.063 -2.340 -1.834 HAG MLO 29 MLO HAH HAH H 0 1 N N N N N N 55.054 23.521 -2.347 -2.835 -2.333 2.164 HAH MLO 30 MLO HAI HAI H 0 1 N N N N N N 53.652 23.531 5.887 4.325 -0.280 -1.375 HAI MLO 31 MLO HAJ HAJ H 0 1 N N N N N N 57.516 23.345 -2.457 -4.500 -0.859 1.113 HAJ MLO 32 MLO HAK HAK H 0 1 N N N N N N 56.761 24.509 3.107 0.875 1.468 0.419 HAK MLO 33 MLO HAL HAL H 0 1 N N N N N N 57.681 23.224 1.820 -1.452 0.929 -1.273 HAL MLO 34 MLO HAM HAM H 0 1 N N N N N N 55.362 25.052 6.541 2.789 2.829 -0.172 HAM MLO 35 MLO HAMA HAMA H 0 0 N N N N N N 56.511 25.716 5.330 4.227 2.101 -0.928 HAMA MLO 36 MLO HAN HAN H 0 1 N N N N N N 59.704 23.525 0.570 -5.066 0.515 -0.800 HAN MLO 37 MLO HANA HANA H 0 0 N N N N N N 59.654 23.778 -1.212 -3.793 1.263 -1.795 HANA MLO 38 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal MLO CAA CAE DOUB N N 1 MLO CAA HAA SING N N 2 MLO CAA HAAA SING N N 3 MLO CAB CAF DOUB N N 4 MLO CAB HAB SING N N 5 MLO CAB HABA SING N N 6 MLO OAC CAO SING N N 7 MLO OAC HOAC SING N N 8 MLO OAD CAP SING N N 9 MLO OAD HOAD SING N N 10 MLO CAM CAE SING N N 11 MLO CAE HAE SING N N 12 MLO CAF CAN SING N N 13 MLO CAF HAF SING N N 14 MLO CAO CAG DOUB Y N 15 MLO CAG CAI SING Y N 16 MLO CAG HAG SING N N 17 MLO CAJ CAH DOUB Y N 18 MLO CAH CAP SING Y N 19 MLO CAH HAH SING N N 20 MLO CAQ CAI DOUB Y N 21 MLO CAI HAI SING N N 22 MLO CAJ CAR SING Y N 23 MLO CAJ HAJ SING N N 24 MLO CAS CAK DOUB Y N 25 MLO CAK CAQ SING Y N 26 MLO CAK HAK SING N N 27 MLO CAR CAL DOUB Y N 28 MLO CAL CAT SING Y N 29 MLO CAL HAL SING N N 30 MLO CAQ CAM SING N N 31 MLO CAM HAM SING N N 32 MLO CAM HAMA SING N N 33 MLO CAN CAR SING N N 34 MLO CAN HAN SING N N 35 MLO CAN HANA SING N N 36 MLO CAS CAO SING Y N 37 MLO CAP CAT DOUB Y N 38 MLO CAT CAS SING Y N 39 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor MLO SMILES ACDLabs 12.01 Oc2ccc(cc2c1c(O)ccc(c1)C/C=C)C/C=C MLO SMILES_CANONICAL CACTVS 3.370 Oc1ccc(CC=C)cc1c2cc(CC=C)ccc2O MLO SMILES CACTVS 3.370 Oc1ccc(CC=C)cc1c2cc(CC=C)ccc2O MLO SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 C=CCc1ccc(c(c1)c2cc(ccc2O)CC=C)O MLO SMILES "OpenEye OEToolkits" 1.7.0 C=CCc1ccc(c(c1)c2cc(ccc2O)CC=C)O MLO InChI InChI 1.03 InChI=1S/C18H18O2/c1-3-5-13-7-9-17(19)15(11-13)16-12-14(6-4-2)8-10-18(16)20/h3-4,7-12,19-20H,1-2,5-6H2 MLO InChIKey InChI 1.03 VVOAZFWZEDHOOU-UHFFFAOYSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier MLO "SYSTEMATIC NAME" ACDLabs 12.01 "5,5'-di(prop-2-en-1-yl)biphenyl-2,2'-diol" MLO "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 2-(2-hydroxy-5-prop-2-enyl-phenyl)-4-prop-2-enyl-phenol # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site MLO 'Create component' 2011-03-23 RCSB MLO 'Modify aromatic_flag' 2011-06-04 RCSB MLO 'Modify descriptor' 2011-06-04 RCSB MLO 'Modify synonyms' 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id MLO _pdbx_chem_comp_synonyms.name magnolol _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? # _pdbe_chem_comp_synonyms.comp_id MLO _pdbe_chem_comp_synonyms.name magnolol _pdbe_chem_comp_synonyms.provenance wwPDB _pdbe_chem_comp_synonyms.type ? # loop_ _software.name _software.version _software.description rdkit 2023.09.6 'Core functionality.' pdbeccdutils 0.8.6 'Wrapper to provide 2D templates and molecular fragments.' # loop_ _pdbe_chem_comp_atom_depiction.comp_id _pdbe_chem_comp_atom_depiction.atom_id _pdbe_chem_comp_atom_depiction.element _pdbe_chem_comp_atom_depiction.model_Cartn_x _pdbe_chem_comp_atom_depiction.model_Cartn_y _pdbe_chem_comp_atom_depiction.pdbx_ordinal MLO CAA C 3.000 6.000 1 MLO CAB C 10.794 -6.000 2 MLO OAC O 9.495 0.750 3 MLO OAD O 4.299 -0.750 4 MLO CAE C 4.299 5.250 5 MLO CAF C 9.495 -5.250 6 MLO CAG C 8.196 3.000 7 MLO CAH C 5.598 -3.000 8 MLO CAI C 6.897 3.750 9 MLO CAJ C 6.897 -3.750 10 MLO CAK C 5.598 1.500 11 MLO CAL C 8.196 -1.500 12 MLO CAM C 4.299 3.750 13 MLO CAN C 9.495 -3.750 14 MLO CAO C 8.196 1.500 15 MLO CAP C 5.598 -1.500 16 MLO CAQ C 5.598 3.000 17 MLO CAR C 8.196 -3.000 18 MLO CAS C 6.897 0.750 19 MLO CAT C 6.897 -0.750 20 # loop_ _pdbe_chem_comp_bond_depiction.comp_id _pdbe_chem_comp_bond_depiction.atom_id_1 _pdbe_chem_comp_bond_depiction.atom_id_2 _pdbe_chem_comp_bond_depiction.value_order _pdbe_chem_comp_bond_depiction.bond_dir _pdbe_chem_comp_bond_depiction.pdbx_ordinal MLO CAA CAE DOUBLE NONE 1 MLO CAB CAF DOUBLE NONE 2 MLO OAC CAO SINGLE NONE 3 MLO OAD CAP SINGLE NONE 4 MLO CAM CAE SINGLE NONE 5 MLO CAF CAN SINGLE NONE 6 MLO CAO CAG DOUBLE NONE 7 MLO CAG CAI SINGLE NONE 8 MLO CAJ CAH DOUBLE NONE 9 MLO CAH CAP SINGLE NONE 10 MLO CAQ CAI DOUBLE NONE 11 MLO CAJ CAR SINGLE NONE 12 MLO CAS CAK DOUBLE NONE 13 MLO CAK CAQ SINGLE NONE 14 MLO CAR CAL DOUBLE NONE 15 MLO CAL CAT SINGLE NONE 16 MLO CAQ CAM SINGLE NONE 17 MLO CAN CAR SINGLE NONE 18 MLO CAS CAO SINGLE NONE 19 MLO CAP CAT DOUBLE NONE 20 MLO CAT CAS SINGLE NONE 21 # loop_ _pdbe_chem_comp_substructure.comp_id _pdbe_chem_comp_substructure.substructure_name _pdbe_chem_comp_substructure.id _pdbe_chem_comp_substructure.substructure_type _pdbe_chem_comp_substructure.substructure_smiles _pdbe_chem_comp_substructure.substructure_inchis _pdbe_chem_comp_substructure.substructure_inchikeys MLO MurckoScaffold S1 scaffold c1ccc(-c2ccccc2)cc1 InChI=1S/C12H10/c1-3-7-11(8-4-1)12-9-5-2-6-10-12/h1-10H ZUOUZKKEUPVFJK-UHFFFAOYSA-N MLO phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N # loop_ _pdbe_chem_comp_substructure_mapping.comp_id _pdbe_chem_comp_substructure_mapping.atom_id _pdbe_chem_comp_substructure_mapping.substructure_id _pdbe_chem_comp_substructure_mapping.substructure_ordinal MLO CAG S1 1 MLO CAH S1 1 MLO CAI S1 1 MLO CAJ S1 1 MLO CAK S1 1 MLO CAL S1 1 MLO CAO S1 1 MLO CAP S1 1 MLO CAQ S1 1 MLO CAR S1 1 MLO CAS S1 1 MLO CAT S1 1 MLO CAG F1 1 MLO CAO F1 1 MLO CAS F1 1 MLO CAK F1 1 MLO CAQ F1 1 MLO CAI F1 1 MLO CAH F1 2 MLO CAJ F1 2 MLO CAR F1 2 MLO CAL F1 2 MLO CAT F1 2 MLO CAP F1 2 # _pdbe_chem_comp_rdkit_properties.comp_id MLO _pdbe_chem_comp_rdkit_properties.exactmw 266.131 _pdbe_chem_comp_rdkit_properties.amw 266.340 _pdbe_chem_comp_rdkit_properties.lipinskiHBA 2 _pdbe_chem_comp_rdkit_properties.lipinskiHBD 2 _pdbe_chem_comp_rdkit_properties.NumRotatableBonds 7 _pdbe_chem_comp_rdkit_properties.NumHBD 2 _pdbe_chem_comp_rdkit_properties.NumHBA 2 _pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 20 _pdbe_chem_comp_rdkit_properties.NumAtoms 38 _pdbe_chem_comp_rdkit_properties.NumHeteroatoms 2 _pdbe_chem_comp_rdkit_properties.NumAmideBonds 0 _pdbe_chem_comp_rdkit_properties.FractionCSP3 0.111 _pdbe_chem_comp_rdkit_properties.NumRings 2 _pdbe_chem_comp_rdkit_properties.NumAromaticRings 2 _pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0 _pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0 _pdbe_chem_comp_rdkit_properties.NumHeterocycles 0 _pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0 _pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0 _pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0 _pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0 _pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0 _pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0 _pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0 _pdbe_chem_comp_rdkit_properties.labuteASA 144.350 _pdbe_chem_comp_rdkit_properties.tpsa 40.460 _pdbe_chem_comp_rdkit_properties.CrippenClogP 2.808 _pdbe_chem_comp_rdkit_properties.CrippenMR 79.936 _pdbe_chem_comp_rdkit_properties.chi0v 9.816 _pdbe_chem_comp_rdkit_properties.chi1v 5.158 _pdbe_chem_comp_rdkit_properties.chi2v 2.181 _pdbe_chem_comp_rdkit_properties.chi3v 2.181 _pdbe_chem_comp_rdkit_properties.chi4v 1.392 _pdbe_chem_comp_rdkit_properties.chi0n 27.816 _pdbe_chem_comp_rdkit_properties.chi1n 13.975 _pdbe_chem_comp_rdkit_properties.chi2n 2.181 _pdbe_chem_comp_rdkit_properties.chi3n 2.181 _pdbe_chem_comp_rdkit_properties.chi4n 1.392 _pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.480 _pdbe_chem_comp_rdkit_properties.kappa1 3.585 _pdbe_chem_comp_rdkit_properties.kappa2 6.110 _pdbe_chem_comp_rdkit_properties.kappa3 2.912 _pdbe_chem_comp_rdkit_properties.Phi 1.095 # loop_ _pdbe_chem_comp_external_mappings.comp_id _pdbe_chem_comp_external_mappings.source _pdbe_chem_comp_external_mappings.resource _pdbe_chem_comp_external_mappings.resource_id MLO UniChem ChEMBL CHEMBL180920 MLO UniChem 'KEGG LIGAND' C10651 MLO UniChem ChEBI 6643 MLO UniChem ZINC ZINC000000001645 MLO UniChem eMolecules 1935912 MLO UniChem fdasrs 001E35HGVF MLO UniChem HMDB HMDB0254305 MLO UniChem Selleck Magnolol(2,2-Bichavicol) MLO UniChem PubChem 72300 MLO UniChem BindingDb 78304 MLO UniChem BRENDA 16855 MLO UniChem BRENDA 193015 MLO UniChem ChemicalBook CB9265352 MLO UniChem MedChemExpress HY-N0163 MLO UniChem 'Probes And Drugs' PD010789 MLO UniChem CCDC CIPXII MLO UniChem 'EPA CompTox Dashboard' DTXSID0044076 MLO UniChem SureChEMBL SCHEMBL132477 MLO UniChem 'PubChem TPHARMA' 14774834 MLO UniChem Mcule MCULE-1351244567 MLO UniChem NMRShiftDB 60060687 MLO UniChem ACTor 528-43-8 MLO UniChem Nikkaji J277.749E # loop_ _pdbe_chem_comp_rdkit_conformer.comp_id _pdbe_chem_comp_rdkit_conformer.atom_id _pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit _pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit _pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit _pdbe_chem_comp_rdkit_conformer.rdkit_method _pdbe_chem_comp_rdkit_conformer.rdkit_ordinal MLO CAA -2.721 2.734 -1.440 ETKDGv3 1 MLO CAB 3.104 1.387 -2.399 ETKDGv3 2 MLO OAC -0.751 -1.189 3.461 ETKDGv3 3 MLO OAD 0.307 -3.373 1.224 ETKDGv3 4 MLO CAE -3.794 1.987 -1.162 ETKDGv3 5 MLO CAF 4.048 0.994 -1.538 ETKDGv3 6 MLO CAG -2.766 -0.538 2.431 ETKDGv3 7 MLO CAH 2.577 -2.517 0.779 ETKDGv3 8 MLO CAI -3.544 -0.106 1.254 ETKDGv3 9 MLO CAJ 3.403 -1.508 0.483 ETKDGv3 10 MLO CAK -1.510 -0.313 -0.079 ETKDGv3 11 MLO CAL 1.561 0.091 0.481 ETKDGv3 12 MLO CAM -3.728 0.485 -1.143 ETKDGv3 13 MLO CAN 3.810 0.985 -0.054 ETKDGv3 14 MLO CAO -1.461 -0.820 2.319 ETKDGv3 15 MLO CAP 1.128 -2.277 0.949 ETKDGv3 16 MLO CAQ -2.953 -0.000 0.052 ETKDGv3 17 MLO CAR 2.877 -0.133 0.328 ETKDGv3 18 MLO CAS -0.797 -0.718 0.986 ETKDGv3 19 MLO CAT 0.639 -1.021 0.821 ETKDGv3 20 MLO HAA -1.761 2.276 -1.659 ETKDGv3 21 MLO HAAA -2.801 3.816 -1.450 ETKDGv3 22 MLO HAB 3.308 1.386 -3.464 ETKDGv3 23 MLO HABA 2.129 1.711 -2.050 ETKDGv3 24 MLO HOAC 0.243 -1.376 3.444 ETKDGv3 25 MLO HOAD -0.699 -3.304 1.309 ETKDGv3 26 MLO HAE -4.741 2.476 -0.955 ETKDGv3 27 MLO HAF 5.016 0.683 -1.918 ETKDGv3 28 MLO HAG -3.256 -0.608 3.394 ETKDGv3 29 MLO HAH 2.970 -3.520 0.886 ETKDGv3 30 MLO HAI -4.593 0.136 1.377 ETKDGv3 31 MLO HAJ 4.461 -1.702 0.352 ETKDGv3 32 MLO HAK -1.035 -0.221 -1.049 ETKDGv3 33 MLO HAL 1.159 1.089 0.356 ETKDGv3 34 MLO HAM -4.762 0.078 -1.110 ETKDGv3 35 MLO HAMA -3.265 0.117 -2.085 ETKDGv3 36 MLO HAN 4.782 0.840 0.465 ETKDGv3 37 MLO HANA 3.413 1.972 0.272 ETKDGv3 38 #