data_MNR # _chem_comp.id MNR _chem_comp.name "PROTOPORPHYRIN IX CONTAINING MN" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C34 H32 Mn N4 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 5 _chem_comp.pdbx_initial_date 2006-01-18 _chem_comp.pdbx_modified_date 2011-06-07 _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 615.580 _chem_comp.one_letter_code ? _chem_comp.three_letter_code MNR _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag Y _chem_comp.pdbx_model_coordinates_db_code 2FEU _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal MNR CHA CHA C 0 1 Y N N N N N 8.651 32.496 -1.449 ? ? ? CHA MNR 1 MNR CHB CHB C 0 1 Y N N N N N 13.181 32.242 0.261 ? ? ? CHB MNR 2 MNR CHC CHC C 0 1 Y N N N N N 11.451 30.977 4.619 ? ? ? CHC MNR 3 MNR CHD CHD C 0 1 Y N N N N N 6.989 30.704 2.741 ? ? ? CHD MNR 4 MNR C1A C1A C 0 1 Y N N N N N 10.052 32.600 -1.375 ? ? ? C1A MNR 5 MNR C2A C2A C 0 1 N N N N N N 10.969 32.899 -2.492 ? ? ? C2A MNR 6 MNR C3A C3A C 0 1 N N N N N N 12.240 32.764 -2.020 ? ? ? C3A MNR 7 MNR C4A C4A C 0 1 Y N N N N N 12.112 32.422 -0.602 ? ? ? C4A MNR 8 MNR CMA CMA C 0 1 N N N N N N 13.553 32.967 -2.809 ? ? ? CMA MNR 9 MNR CAA CAA C 0 1 N N N N N N 10.536 33.228 -3.925 ? ? ? CAA MNR 10 MNR CBA CBA C 0 1 N N N N N N 10.591 32.050 -4.894 ? ? ? CBA MNR 11 MNR CGA CGA C 0 1 N N N N N N 10.093 32.400 -6.292 ? ? ? CGA MNR 12 MNR O1A O1A O 0 1 N N N N N N 10.046 33.606 -6.637 ? ? ? O1A MNR 13 MNR O2A O2A O 0 1 N N N N N N 9.768 31.464 -7.060 ? ? ? O2A MNR 14 MNR C1B C1B C 0 1 Y N N N N N 13.105 31.878 1.607 ? ? ? C1B MNR 15 MNR C2B C2B C 0 1 Y N N N N N 14.244 31.838 2.493 ? ? ? C2B MNR 16 MNR C3B C3B C 0 1 Y N N N N N 13.779 31.488 3.747 ? ? ? C3B MNR 17 MNR C4B C4B C 0 1 Y N N N N N 12.338 31.315 3.587 ? ? ? C4B MNR 18 MNR CMB CMB C 0 1 N N N N N N 15.674 32.168 2.082 ? ? ? CMB MNR 19 MNR CAB CAB C 0 1 N N N N N N 14.479 31.315 4.961 ? ? ? CAB MNR 20 MNR CBB CBB C 0 1 N N N N N N 15.825 31.535 5.248 ? ? ? CBB MNR 21 MNR C1C C1C C 0 1 Y N N N N N 10.073 30.829 4.506 ? ? ? C1C MNR 22 MNR C2C C2C C 0 1 N N N N N N 9.214 30.319 5.573 ? ? ? C2C MNR 23 MNR C3C C3C C 0 1 N N N N N N 7.977 30.169 5.039 ? ? ? C3C MNR 24 MNR C4C C4C C 0 1 Y N N N N N 8.068 30.601 3.642 ? ? ? C4C MNR 25 MNR CMC CMC C 0 1 N N N N N N 9.635 30.038 7.021 ? ? ? CMC MNR 26 MNR CAC CAC C 0 1 N N N N N N 6.843 29.745 5.751 ? ? ? CAC MNR 27 MNR CBC CBC C 0 1 N N N N N N 6.069 28.674 5.370 ? ? ? CBC MNR 28 MNR C1D C1D C 0 1 Y N N N N N 7.036 31.245 1.454 ? ? ? C1D MNR 29 MNR C2D C2D C 0 1 Y N N N N N 5.891 31.357 0.561 ? ? ? C2D MNR 30 MNR C3D C3D C 0 1 Y N N N N N 6.344 31.842 -0.614 ? ? ? C3D MNR 31 MNR C4D C4D C 0 1 Y N N N N N 7.789 32.078 -0.436 ? ? ? C4D MNR 32 MNR CMD CMD C 0 1 N N N N N N 4.458 30.962 0.902 ? ? ? CMD MNR 33 MNR CAD CAD C 0 1 N N N N N N 5.608 31.987 -1.936 ? ? ? CAD MNR 34 MNR CBD CBD C 0 1 N N N N N N 5.069 33.392 -2.149 ? ? ? CBD MNR 35 MNR CGD CGD C 0 1 N N N N N N 4.543 33.606 -3.552 ? ? ? CGD MNR 36 MNR O1D O1D O 0 1 N N N N N N 3.835 34.612 -3.780 ? ? ? O1D MNR 37 MNR O2D O2D O 0 1 N N N N N N 4.845 32.781 -4.440 ? ? ? O2D MNR 38 MNR MN MN MN 3 0 N N R N N N 10.034 31.929 1.642 ? ? ? MN MNR 39 MNR NA "N A" N 1 1 Y N N N N N 10.774 32.321 -0.224 ? ? ? NA MNR 40 MNR NB "N B" N 0 1 Y N N N N N 11.924 31.602 2.307 ? ? ? NB MNR 41 MNR NC "N C" N 1 1 Y N N N N N 9.356 31.009 3.341 ? ? ? NC MNR 42 MNR ND "N D" N 0 1 Y N N N N N 8.174 31.720 0.838 ? ? ? ND MNR 43 MNR HHA HHA H 0 1 N N N N N N 8.195 32.769 -2.389 ? ? ? HHA MNR 44 MNR HHB HHB H 0 1 N N N N N N 14.169 32.398 -0.147 ? ? ? HHB MNR 45 MNR HHC HHC H 0 1 N N N N N N 11.880 30.816 5.597 ? ? ? HHC MNR 46 MNR HHD HHD H 0 1 N N N N N N 6.034 30.329 3.078 ? ? ? HHD MNR 47 MNR HMA1 1HMA H 0 0 N N N N N N 14.232 32.125 -2.613 ? ? ? HMA1 MNR 48 MNR HMA2 2HMA H 0 0 N N N N N N 14.030 33.906 -2.491 ? ? ? HMA2 MNR 49 MNR HMA3 3HMA H 0 0 N N N N N N 13.331 33.015 -3.885 ? ? ? HMA3 MNR 50 MNR HAA1 1HAA H 0 0 N N N N N N 11.246 33.978 -4.303 ? ? ? HAA1 MNR 51 MNR HAA2 2HAA H 0 0 N N N N N N 9.496 33.584 -3.888 ? ? ? HAA2 MNR 52 MNR HBA1 1HBA H 0 0 N N N N N N 9.931 31.265 -4.496 ? ? ? HBA1 MNR 53 MNR HBA2 2HBA H 0 0 N N N N N N 11.637 31.718 -4.974 ? ? ? HBA2 MNR 54 MNR H2A H2A H 0 1 N N N N N N 9.497 31.821 -7.898 ? ? ? H2A MNR 55 MNR HMB1 1HMB H 0 0 N N N N N N 16.348 31.370 2.428 ? ? ? HMB1 MNR 56 MNR HMB2 2HMB H 0 0 N N N N N N 15.974 33.124 2.535 ? ? ? HMB2 MNR 57 MNR HMB3 3HMB H 0 0 N N N N N N 15.732 32.248 0.986 ? ? ? HMB3 MNR 58 MNR HAB HAB H 0 1 N N N N N N 13.884 30.960 5.789 ? ? ? HAB MNR 59 MNR HBB1 1HBB H 0 0 N N N N N N 16.554 31.889 4.534 ? ? ? HBB1 MNR 60 MNR HBB2 2HBB H 0 0 N N N N N N 16.040 31.304 6.281 ? ? ? HBB2 MNR 61 MNR HMC1 1HMC H 0 0 N N N N N N 9.192 29.088 7.354 ? ? ? HMC1 MNR 62 MNR HMC2 2HMC H 0 0 N N N N N N 9.284 30.854 7.670 ? ? ? HMC2 MNR 63 MNR HMC3 3HMC H 0 0 N N N N N N 10.731 29.971 7.078 ? ? ? HMC3 MNR 64 MNR HAC HAC H 0 1 N N N N N N 6.565 30.287 6.643 ? ? ? HAC MNR 65 MNR HBC1 1HBC H 0 0 N N N N N N 6.245 28.057 4.501 ? ? ? HBC1 MNR 66 MNR HBC2 2HBC H 0 0 N N N N N N 5.258 28.544 6.071 ? ? ? HBC2 MNR 67 MNR HMD1 1HMD H 0 0 N N N N N N 4.220 29.999 0.426 ? ? ? HMD1 MNR 68 MNR HMD2 2HMD H 0 0 N N N N N N 3.767 31.735 0.533 ? ? ? HMD2 MNR 69 MNR HMD3 3HMD H 0 0 N N N N N N 4.353 30.867 1.993 ? ? ? HMD3 MNR 70 MNR HAD1 1HAD H 0 0 N N N N N N 4.752 31.297 -1.922 ? ? ? HAD1 MNR 71 MNR HAD2 2HAD H 0 0 N N N N N N 6.308 31.754 -2.752 ? ? ? HAD2 MNR 72 MNR HBD1 1HBD H 0 0 N N N N N N 5.898 34.097 -1.991 ? ? ? HBD1 MNR 73 MNR HBD2 2HBD H 0 0 N N N N N N 4.246 33.560 -1.439 ? ? ? HBD2 MNR 74 MNR H1D H1D H 0 1 N N N N N N 3.589 34.625 -4.697 ? ? ? H1D MNR 75 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal MNR CHA C1A SING Y N 1 MNR CHA C4D DOUB Y N 2 MNR CHA HHA SING N N 3 MNR CHB C4A DOUB Y N 4 MNR CHB C1B SING Y N 5 MNR CHB HHB SING N N 6 MNR CHC C4B SING Y N 7 MNR CHC C1C DOUB Y N 8 MNR CHC HHC SING N N 9 MNR CHD C4C SING Y N 10 MNR CHD C1D DOUB Y N 11 MNR CHD HHD SING N N 12 MNR C1A C2A SING N N 13 MNR C1A NA DOUB Y N 14 MNR C2A C3A DOUB N N 15 MNR C2A CAA SING N N 16 MNR C3A C4A SING N N 17 MNR C3A CMA SING N N 18 MNR C4A NA SING Y N 19 MNR CMA HMA1 SING N N 20 MNR CMA HMA2 SING N N 21 MNR CMA HMA3 SING N N 22 MNR CAA CBA SING N N 23 MNR CAA HAA1 SING N N 24 MNR CAA HAA2 SING N N 25 MNR CBA CGA SING N N 26 MNR CBA HBA1 SING N N 27 MNR CBA HBA2 SING N N 28 MNR CGA O1A DOUB N N 29 MNR CGA O2A SING N N 30 MNR O2A H2A SING N N 31 MNR C1B C2B DOUB Y N 32 MNR C1B NB SING Y N 33 MNR C2B C3B SING Y N 34 MNR C2B CMB SING N N 35 MNR C3B C4B DOUB Y N 36 MNR C3B CAB SING N N 37 MNR C4B NB SING Y N 38 MNR CMB HMB1 SING N N 39 MNR CMB HMB2 SING N N 40 MNR CMB HMB3 SING N N 41 MNR CAB CBB DOUB N N 42 MNR CAB HAB SING N N 43 MNR CBB HBB1 SING N N 44 MNR CBB HBB2 SING N N 45 MNR C1C C2C SING N N 46 MNR C1C NC SING Y N 47 MNR C2C C3C DOUB N N 48 MNR C2C CMC SING N N 49 MNR C3C C4C SING N N 50 MNR C3C CAC SING N N 51 MNR C4C NC DOUB Y N 52 MNR CMC HMC1 SING N N 53 MNR CMC HMC2 SING N N 54 MNR CMC HMC3 SING N N 55 MNR CAC CBC DOUB N N 56 MNR CAC HAC SING N N 57 MNR CBC HBC1 SING N N 58 MNR CBC HBC2 SING N N 59 MNR C1D C2D SING Y N 60 MNR C1D ND SING Y N 61 MNR C2D C3D DOUB Y N 62 MNR C2D CMD SING N N 63 MNR C3D C4D SING Y N 64 MNR C3D CAD SING N N 65 MNR C4D ND SING Y N 66 MNR CMD HMD1 SING N N 67 MNR CMD HMD2 SING N N 68 MNR CMD HMD3 SING N N 69 MNR CAD CBD SING N N 70 MNR CAD HAD1 SING N N 71 MNR CAD HAD2 SING N N 72 MNR CBD CGD SING N N 73 MNR CBD HBD1 SING N N 74 MNR CBD HBD2 SING N N 75 MNR CGD O1D SING N N 76 MNR CGD O2D DOUB N N 77 MNR O1D H1D SING N N 78 MNR MN NA SING N N 79 MNR MN NB SING N N 80 MNR MN NC SING N N 81 MNR MN ND SING N N 82 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor MNR SMILES ACDLabs 12.01 O=C(O)CCC5=C(c4cc3C(/C=C)=C(C2=Cc8c(c(c7cc1C(=C(C6=[n+]1[Mn+3]([n+]23)(n4C5=C6)n78)CCC(=O)O)C)C)/C=C)C)C MNR InChI InChI 1.03 InChI=1S/C34H34N4O4.Mn/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,1-2,9-12H2,3-6H3,(H4,35,36,37,38,39,40,41,42);/q;+7/p-2/b25-13-,26-13-,27-14-,28-15-,29-14-,30-15-,31-16-,32-16-; MNR InChIKey InChI 1.03 UAPHVASSHGRKEN-RGGAHWMASA-L MNR SMILES_CANONICAL CACTVS 3.370 CC1=C(CCC(O)=O)C2=CC3=[N@@+]4C(=Cc5n6c(C=C7C(=C(C=C)C8=[N@@+]7[Mn+3]46[N@@]2C1=C8)C)c(C=C)c5C)C(=C3CCC(O)=O)C MNR SMILES CACTVS 3.370 CC1=C(CCC(O)=O)C2=CC3=[N+]4C(=Cc5n6c(C=C7C(=C(C=C)C8=[N+]7[Mn+3]46[N]2C1=C8)C)c(C=C)c5C)C(=C3CCC(O)=O)C MNR SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 Cc1c2cc3[n+]4c(cc5c(c(c6n5[Mn@+3]47n2c(c1CCC(=O)O)cc8[n+]7c(c6)C(=C8CCC(=O)O)C)C)C=C)C(=C3C=C)C MNR SMILES "OpenEye OEToolkits" 1.7.2 Cc1c2cc3[n+]4c(cc5c(c(c6n5[Mn+3]47n2c(c1CCC(=O)O)cc8[n+]7c(c6)C(=C8CCC(=O)O)C)C)C=C)C(=C3C=C)C # _pdbx_chem_comp_identifier.comp_id MNR _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program ACDLabs _pdbx_chem_comp_identifier.program_version 12.01 _pdbx_chem_comp_identifier.identifier "[3,3'-(7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-diyl-kappa~4~N~21~,N~22~,N~23~,N~24~)dipropanoato(2-)]manganese(5+)" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site MNR 'Create component' 2006-01-18 RCSB MNR 'Modify descriptor' 2011-06-04 RCSB MNR 'Modify name' 2011-06-07 RCSB MNR 'Modify descriptor' 2011-06-07 RCSB MNR 'Modify identifier' 2011-06-07 RCSB # loop_ _software.name _software.version _software.description rdkit 2023.03.3 'Core functionality.' pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.' # loop_ _pdbe_chem_comp_atom_depiction.comp_id _pdbe_chem_comp_atom_depiction.atom_id _pdbe_chem_comp_atom_depiction.element _pdbe_chem_comp_atom_depiction.model_Cartn_x _pdbe_chem_comp_atom_depiction.model_Cartn_y _pdbe_chem_comp_atom_depiction.pdbx_ordinal MNR CHA C -3.758 0.000 1 MNR CHB C 0.000 3.796 2 MNR CHC C 3.796 0.000 3 MNR CHD C 0.000 -3.796 4 MNR C1A C -2.999 1.291 5 MNR C2A C -3.682 2.657 6 MNR C3A C -2.619 3.720 7 MNR C4A C -1.291 3.037 8 MNR CMA C -2.855 5.205 9 MNR CAA C -5.190 2.908 10 MNR CBA C -5.717 4.312 11 MNR CGA C -7.196 4.558 12 MNR O1A O -7.723 5.962 13 MNR O2A O -8.149 3.399 14 MNR C1B C 1.329 3.037 15 MNR C2B C 2.658 3.720 16 MNR C3B C 3.758 2.657 17 MNR C4B C 3.037 1.291 18 MNR CMB C 2.886 5.197 19 MNR CAB C 5.265 2.923 20 MNR CBB C 6.230 1.774 21 MNR C1C C 3.037 -1.291 22 MNR C2C C 3.758 -2.657 23 MNR C3C C 2.658 -3.720 24 MNR C4C C 1.329 -3.037 25 MNR CMC C 5.288 -2.877 26 MNR CAC C 2.871 -5.236 27 MNR CBC C 1.689 -6.159 28 MNR C1D C -1.291 -3.037 29 MNR C2D C -2.619 -3.720 30 MNR C3D C -3.682 -2.657 31 MNR C4D C -2.999 -1.291 32 MNR CMD C -2.848 -5.197 33 MNR CAD C -5.167 -2.892 34 MNR CBD C -6.111 -1.727 35 MNR CGD C -7.593 -1.961 36 MNR O1D O -8.537 -0.795 37 MNR O2D O -8.130 -3.362 38 MNR MN Mn 0.000 0.000 39 MNR NA N -1.518 1.556 40 MNR NB N 1.556 1.556 41 MNR NC N 1.556 -1.556 42 MNR ND N -1.518 -1.556 43 # loop_ _pdbe_chem_comp_bond_depiction.comp_id _pdbe_chem_comp_bond_depiction.atom_id_1 _pdbe_chem_comp_bond_depiction.atom_id_2 _pdbe_chem_comp_bond_depiction.value_order _pdbe_chem_comp_bond_depiction.bond_dir _pdbe_chem_comp_bond_depiction.pdbx_ordinal MNR CHA C1A SINGLE NONE 1 MNR CHA C4D DOUBLE NONE 2 MNR CHB C4A DOUBLE NONE 3 MNR CHB C1B SINGLE NONE 4 MNR CHC C4B SINGLE NONE 5 MNR CHC C1C DOUBLE NONE 6 MNR CHD C4C SINGLE NONE 7 MNR CHD C1D DOUBLE NONE 8 MNR C1A C2A SINGLE NONE 9 MNR C1A NA DOUBLE NONE 10 MNR C2A C3A DOUBLE NONE 11 MNR C2A CAA SINGLE NONE 12 MNR C3A C4A SINGLE NONE 13 MNR C3A CMA SINGLE NONE 14 MNR C4A NA SINGLE NONE 15 MNR CAA CBA SINGLE NONE 16 MNR CBA CGA SINGLE NONE 17 MNR CGA O1A DOUBLE NONE 18 MNR CGA O2A SINGLE NONE 19 MNR C1B C2B DOUBLE NONE 20 MNR C1B NB SINGLE NONE 21 MNR C2B C3B SINGLE NONE 22 MNR C2B CMB SINGLE NONE 23 MNR C3B C4B DOUBLE NONE 24 MNR C3B CAB SINGLE NONE 25 MNR C4B NB SINGLE NONE 26 MNR CAB CBB DOUBLE NONE 27 MNR C1C C2C SINGLE NONE 28 MNR C1C NC SINGLE NONE 29 MNR C2C C3C DOUBLE NONE 30 MNR C2C CMC SINGLE NONE 31 MNR C3C C4C SINGLE NONE 32 MNR C3C CAC SINGLE NONE 33 MNR C4C NC DOUBLE NONE 34 MNR CAC CBC DOUBLE NONE 35 MNR C1D C2D SINGLE NONE 36 MNR C1D ND SINGLE NONE 37 MNR C2D C3D DOUBLE NONE 38 MNR C2D CMD SINGLE NONE 39 MNR C3D C4D SINGLE NONE 40 MNR C3D CAD SINGLE NONE 41 MNR C4D ND SINGLE NONE 42 MNR CAD CBD SINGLE NONE 43 MNR CBD CGD SINGLE NONE 44 MNR CGD O1D SINGLE NONE 45 MNR CGD O2D DOUBLE NONE 46 MNR MN NA SINGLE NONE 47 MNR MN NB SINGLE NONE 48 MNR MN NC SINGLE NONE 49 MNR MN ND SINGLE NONE 50 # loop_ _pdbe_chem_comp_substructure.comp_id _pdbe_chem_comp_substructure.substructure_name _pdbe_chem_comp_substructure.id _pdbe_chem_comp_substructure.substructure_type _pdbe_chem_comp_substructure.substructure_smiles _pdbe_chem_comp_substructure.substructure_inchis _pdbe_chem_comp_substructure.substructure_inchikeys MNR MurckoScaffold S1 scaffold 'C1=CC2=[N+]3C1=Cc1ccc4n1[Mn@SP3+3]31n3c(ccc3=CC3=[N+]1C(=C4)C=C3)=C2' 'InChI=1S/C20H12N4.Mn/c1-2-14-10-16-5-6-18(23-16)12-20-8-7-19(24-20)11-17-4-3-15(22-17)9-13(1)21-14;/h1-12H;/q-2;+7' YHHOTONTUCNPIZ-UHFFFAOYSA-N MNR porphin-like F1 fragment C1~C~C2~C~C3~C~C~C(~C~C4~C~C~C(~C~C5~C~C~C(~C~C~1~N~2)~N~5)~N~4)~N~3 ? ? MNR pyrrole F2 fragment 'c1cc[nH]c1' InChI=1S/C4H5N/c1-2-4-5-3-1/h1-5H KAESVJOAVNADME-UHFFFAOYSA-N # loop_ _pdbe_chem_comp_substructure_mapping.comp_id _pdbe_chem_comp_substructure_mapping.atom_id _pdbe_chem_comp_substructure_mapping.substructure_id _pdbe_chem_comp_substructure_mapping.substructure_ordinal MNR CHA S1 1 MNR CHB S1 1 MNR CHC S1 1 MNR CHD S1 1 MNR C1A S1 1 MNR C2A S1 1 MNR C3A S1 1 MNR C4A S1 1 MNR C1B S1 1 MNR C2B S1 1 MNR C3B S1 1 MNR C4B S1 1 MNR C1C S1 1 MNR C2C S1 1 MNR C3C S1 1 MNR C4C S1 1 MNR C1D S1 1 MNR C2D S1 1 MNR C3D S1 1 MNR C4D S1 1 MNR MN S1 1 MNR NA S1 1 MNR NB S1 1 MNR NC S1 1 MNR ND S1 1 MNR C2A F1 1 MNR C3A F1 1 MNR C4A F1 1 MNR CHB F1 1 MNR C1B F1 1 MNR NB F1 1 MNR C4B F1 1 MNR C3B F1 1 MNR C2B F1 1 MNR CHC F1 1 MNR C1C F1 1 MNR NC F1 1 MNR C4C F1 1 MNR CHD F1 1 MNR C1D F1 1 MNR ND F1 1 MNR C4D F1 1 MNR CHA F1 1 MNR C1A F1 1 MNR NA F1 1 MNR C3D F1 1 MNR C2D F1 1 MNR C3C F1 1 MNR C2C F1 1 MNR C1B F2 1 MNR C2B F2 1 MNR C3B F2 1 MNR C4B F2 1 MNR NB F2 1 MNR C1D F2 2 MNR C2D F2 2 MNR C3D F2 2 MNR C4D F2 2 MNR ND F2 2 # _pdbe_chem_comp_rdkit_properties.comp_id MNR _pdbe_chem_comp_rdkit_properties.exactmw 615.178 _pdbe_chem_comp_rdkit_properties.amw 615.592 _pdbe_chem_comp_rdkit_properties.lipinskiHBA 8 _pdbe_chem_comp_rdkit_properties.lipinskiHBD 2 _pdbe_chem_comp_rdkit_properties.NumRotatableBonds 12 _pdbe_chem_comp_rdkit_properties.NumHBD 2 _pdbe_chem_comp_rdkit_properties.NumHBA 6 _pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 43 _pdbe_chem_comp_rdkit_properties.NumAtoms 75 _pdbe_chem_comp_rdkit_properties.NumHeteroatoms 9 _pdbe_chem_comp_rdkit_properties.NumAmideBonds 0 _pdbe_chem_comp_rdkit_properties.FractionCSP3 0.235 _pdbe_chem_comp_rdkit_properties.NumRings 8 _pdbe_chem_comp_rdkit_properties.NumAromaticRings 2 _pdbe_chem_comp_rdkit_properties.NumAliphaticRings 6 _pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0 _pdbe_chem_comp_rdkit_properties.NumHeterocycles 8 _pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2 _pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0 _pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 6 _pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 1 _pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0 _pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1 _pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0 _pdbe_chem_comp_rdkit_properties.labuteASA 296.337 _pdbe_chem_comp_rdkit_properties.tpsa 90.480 _pdbe_chem_comp_rdkit_properties.CrippenClogP 5.164 _pdbe_chem_comp_rdkit_properties.CrippenMR 160.937 _pdbe_chem_comp_rdkit_properties.chi0v 21.980 _pdbe_chem_comp_rdkit_properties.chi1v 13.893 _pdbe_chem_comp_rdkit_properties.chi2v 12.093 _pdbe_chem_comp_rdkit_properties.chi3v 12.093 _pdbe_chem_comp_rdkit_properties.chi4v 11.429 _pdbe_chem_comp_rdkit_properties.chi0n 52.800 _pdbe_chem_comp_rdkit_properties.chi1n 27.598 _pdbe_chem_comp_rdkit_properties.chi2n 7.148 _pdbe_chem_comp_rdkit_properties.chi3n 7.148 _pdbe_chem_comp_rdkit_properties.chi4n 5.595 _pdbe_chem_comp_rdkit_properties.hallKierAlpha -4.461 _pdbe_chem_comp_rdkit_properties.kappa1 9.033 _pdbe_chem_comp_rdkit_properties.kappa2 8.336 _pdbe_chem_comp_rdkit_properties.kappa3 2.826 _pdbe_chem_comp_rdkit_properties.Phi 1.751 # _pdbe_chem_comp_external_mappings.comp_id MNR _pdbe_chem_comp_external_mappings.source UniChem _pdbe_chem_comp_external_mappings.resource PDBe _pdbe_chem_comp_external_mappings.resource_id MNR # loop_ _pdbe_chem_comp_rdkit_conformer.comp_id _pdbe_chem_comp_rdkit_conformer.atom_id _pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit _pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit _pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit _pdbe_chem_comp_rdkit_conformer.rdkit_method _pdbe_chem_comp_rdkit_conformer.rdkit_ordinal MNR CHA 2.374 -0.118 0.859 ETKDGv3 1 MNR CHB -0.839 3.497 0.867 ETKDGv3 2 MNR CHC -4.317 0.241 -0.804 ETKDGv3 3 MNR CHD -0.912 -3.192 -0.785 ETKDGv3 4 MNR C1A 1.747 1.211 0.958 ETKDGv3 5 MNR C2A 2.470 2.436 1.353 ETKDGv3 6 MNR C3A 1.601 3.439 1.299 ETKDGv3 7 MNR C4A 0.323 2.842 0.925 ETKDGv3 8 MNR CMA 1.845 4.873 1.678 ETKDGv3 9 MNR CAA 3.929 2.548 1.728 ETKDGv3 10 MNR CBA 4.791 3.006 0.545 ETKDGv3 11 MNR CGA 4.946 1.928 -0.483 ETKDGv3 12 MNR O1A 4.083 1.789 -1.390 ETKDGv3 13 MNR O2A 6.040 1.070 -0.425 ETKDGv3 14 MNR C1B -2.127 2.867 0.531 ETKDGv3 15 MNR C2B -3.307 3.480 0.617 ETKDGv3 16 MNR C3B -4.311 2.549 0.108 ETKDGv3 17 MNR C4B -3.671 1.423 -0.204 ETKDGv3 18 MNR CMB -3.555 4.863 1.153 ETKDGv3 19 MNR CAB -5.764 2.788 -0.036 ETKDGv3 20 MNR CBB -6.256 3.948 -0.463 ETKDGv3 21 MNR C1C -3.701 -0.927 -1.000 ETKDGv3 22 MNR C2C -4.333 -2.127 -1.543 ETKDGv3 23 MNR C3C -3.430 -3.091 -1.432 ETKDGv3 24 MNR C4C -2.196 -2.479 -0.902 ETKDGv3 25 MNR CMC -5.779 -2.287 -1.922 ETKDGv3 26 MNR CAC -3.669 -4.518 -1.733 ETKDGv3 27 MNR CBC -3.264 -5.491 -0.920 ETKDGv3 28 MNR C1D 0.226 -2.649 -0.339 ETKDGv3 29 MNR C2D 1.493 -3.380 -0.198 ETKDGv3 30 MNR C3D 2.382 -2.549 0.341 ETKDGv3 31 MNR C4D 1.740 -1.233 0.477 ETKDGv3 32 MNR CMD 1.716 -4.834 -0.515 ETKDGv3 33 MNR CAD 3.811 -2.886 0.692 ETKDGv3 34 MNR CBD 4.735 -2.606 -0.494 ETKDGv3 35 MNR CGD 6.154 -2.913 -0.136 ETKDGv3 36 MNR O1D 6.669 -4.183 -0.373 ETKDGv3 37 MNR O2D 6.870 -2.036 0.418 ETKDGv3 38 MNR MN -2.339 1.760 0.106 ETKDGv3 39 MNR NA 0.494 1.442 0.708 ETKDGv3 40 MNR NB -2.266 1.535 0.032 ETKDGv3 41 MNR NC -2.353 -1.219 -0.634 ETKDGv3 42 MNR ND 0.370 -1.290 0.077 ETKDGv3 43 MNR HHA 3.426 -0.183 1.088 ETKDGv3 44 MNR HHB -0.839 4.555 1.090 ETKDGv3 45 MNR HHC -5.356 0.324 -1.088 ETKDGv3 46 MNR HHD -0.897 -4.225 -1.095 ETKDGv3 47 MNR HMA1 1.300 5.545 0.984 ETKDGv3 48 MNR HMA2 1.485 5.046 2.713 ETKDGv3 49 MNR HMA3 2.920 5.135 1.620 ETKDGv3 50 MNR HAA1 4.310 1.588 2.132 ETKDGv3 51 MNR HAA2 4.036 3.282 2.556 ETKDGv3 52 MNR HBA1 5.798 3.282 0.923 ETKDGv3 53 MNR HBA2 4.355 3.912 0.073 ETKDGv3 54 MNR H2A 6.175 0.353 -1.127 ETKDGv3 55 MNR HMB1 -4.605 4.967 1.492 ETKDGv3 56 MNR HMB2 -2.910 5.061 2.034 ETKDGv3 57 MNR HMB3 -3.344 5.613 0.362 ETKDGv3 58 MNR HAB -6.453 1.975 0.154 ETKDGv3 59 MNR HBB1 -5.609 4.771 -0.736 ETKDGv3 60 MNR HBB2 -7.326 4.070 -0.577 ETKDGv3 61 MNR HMC1 -6.129 -1.392 -2.475 ETKDGv3 62 MNR HMC2 -6.390 -2.414 -1.004 ETKDGv3 63 MNR HMC3 -5.929 -3.165 -2.583 ETKDGv3 64 MNR HAC -4.255 -4.784 -2.603 ETKDGv3 65 MNR HBC1 -2.740 -5.273 0.002 ETKDGv3 66 MNR HBC2 -3.485 -6.522 -1.159 ETKDGv3 67 MNR HMD1 1.350 -5.457 0.328 ETKDGv3 68 MNR HMD2 2.788 -5.053 -0.693 ETKDGv3 69 MNR HMD3 1.175 -5.114 -1.441 ETKDGv3 70 MNR HAD1 4.130 -2.288 1.572 ETKDGv3 71 MNR HAD2 3.893 -3.951 0.997 ETKDGv3 72 MNR HBD1 4.436 -3.231 -1.363 ETKDGv3 73 MNR HBD2 4.650 -1.540 -0.795 ETKDGv3 74 MNR H1D 7.623 -4.412 -0.120 ETKDGv3 75 #