data_MPO
#
_chem_comp.id MPO
_chem_comp.name "3[N-MORPHOLINO]PROPANE SULFONIC ACID"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C7 H15 N O4 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2000-05-16
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 209.263
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code MPO
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1EZ1
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
MPO S1 S1 S 0 1 N N N N N N 12.796 22.682 28.775 0.155 0.070 3.086 S1 MPO 1
MPO O1 O1 O 0 1 N N N N N N 14.086 23.431 28.710 -0.076 1.441 3.379 O1 MPO 2
MPO O2 O2 O 0 1 N N N N N N 12.691 21.694 27.659 1.458 -0.495 3.101 O2 MPO 3
MPO O4 O4 O 0 1 N N N N N N 12.602 27.091 23.162 0.664 -0.268 -4.639 O4 MPO 4
MPO N1 N1 N 0 1 N N N N N N 11.970 26.081 25.743 -0.453 0.325 -2.053 N1 MPO 5
MPO C1 C1 C 0 1 N N N N N N 11.376 23.806 28.661 -0.793 -0.473 1.639 C1 MPO 6
MPO O3 O3 O 0 1 N N N N N N 12.751 21.968 30.088 -0.534 -0.641 4.241 O3 MPO 7
MPO C2 C2 C 0 1 N N N N N N 11.218 24.260 27.223 -0.211 0.168 0.378 C2 MPO 8
MPO C3 C3 C 0 1 N N N N N N 12.417 25.093 26.884 -1.012 -0.290 -0.842 C3 MPO 9
MPO C4 C4 C 0 1 N N N N N N 11.671 25.314 24.483 -1.262 -0.153 -3.182 C4 MPO 10
MPO C5 C5 C 0 1 N N N N N N 11.453 26.269 23.331 -0.632 0.309 -4.496 C5 MPO 11
MPO C6 C6 C 0 1 N N N N N N 12.815 27.931 24.303 1.467 0.229 -3.569 C6 MPO 12
MPO C7 C7 C 0 1 N N N N N N 13.014 27.149 25.599 0.891 -0.236 -2.231 C7 MPO 13
MPO H11 1H1 H 0 1 N N N N N N 10.442 23.352 29.067 -0.736 -1.558 1.554 H11 MPO 14
MPO H12 2H1 H 0 1 N N N N N N 11.455 24.662 29.370 -1.834 -0.172 1.753 H12 MPO 15
MPO HO3 HO3 H 0 1 N N N N N N 11.930 21.491 30.129 -0.066 -0.386 5.047 HO3 MPO 16
MPO H21 1H2 H 0 1 N N N N N N 11.060 23.414 26.513 -0.269 1.253 0.462 H21 MPO 17
MPO H22 2H2 H 0 1 N N N N N N 10.253 24.787 27.035 0.829 -0.133 0.264 H22 MPO 18
MPO H31 1H3 H 0 1 N N N N N N 13.313 24.486 26.615 -0.954 -1.375 -0.927 H31 MPO 19
MPO H32 2H3 H 0 1 N N N N N N 12.858 25.610 27.767 -2.053 0.010 -0.728 H32 MPO 20
MPO H41 1H4 H 0 1 N N N N N N 12.461 24.560 24.256 -1.303 -1.243 -3.163 H41 MPO 21
MPO H42 2H4 H 0 1 N N N N N N 10.811 24.615 24.614 -2.272 0.248 -3.101 H42 MPO 22
MPO H51 1H5 H 0 1 N N N N N N 10.522 26.870 23.455 -1.262 -0.001 -5.330 H51 MPO 23
MPO H52 2H5 H 0 1 N N N N N N 11.177 25.736 22.391 -0.547 1.396 -4.493 H52 MPO 24
MPO H61 1H6 H 0 1 N N N N N N 13.665 28.629 24.127 2.485 -0.145 -3.675 H61 MPO 25
MPO H62 2H6 H 0 1 N N N N N N 11.988 28.671 24.409 1.478 1.318 -3.599 H62 MPO 26
MPO H71 1H7 H 0 1 N N N N N N 13.040 27.822 26.487 1.536 0.102 -1.420 H71 MPO 27
MPO H72 2H7 H 0 1 N N N N N N 14.044 26.730 25.674 0.835 -1.325 -2.219 H72 MPO 28
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
MPO S1 O1 DOUB N N 1
MPO S1 O2 DOUB N N 2
MPO S1 C1 SING N N 3
MPO S1 O3 SING N N 4
MPO O4 C5 SING N N 5
MPO O4 C6 SING N N 6
MPO N1 C3 SING N N 7
MPO N1 C4 SING N N 8
MPO N1 C7 SING N N 9
MPO C1 C2 SING N N 10
MPO C1 H11 SING N N 11
MPO C1 H12 SING N N 12
MPO O3 HO3 SING N N 13
MPO C2 C3 SING N N 14
MPO C2 H21 SING N N 15
MPO C2 H22 SING N N 16
MPO C3 H31 SING N N 17
MPO C3 H32 SING N N 18
MPO C4 C5 SING N N 19
MPO C4 H41 SING N N 20
MPO C4 H42 SING N N 21
MPO C5 H51 SING N N 22
MPO C5 H52 SING N N 23
MPO C6 C7 SING N N 24
MPO C6 H61 SING N N 25
MPO C6 H62 SING N N 26
MPO C7 H71 SING N N 27
MPO C7 H72 SING N N 28
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
MPO SMILES ACDLabs 10.04 O=S(=O)(O)CCCN1CCOCC1
MPO SMILES_CANONICAL CACTVS 3.341 O[S](=O)(=O)CCCN1CCOCC1
MPO SMILES CACTVS 3.341 O[S](=O)(=O)CCCN1CCOCC1
MPO SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 C1COCCN1CCCS(=O)(=O)O
MPO SMILES "OpenEye OEToolkits" 1.5.0 C1COCCN1CCCS(=O)(=O)O
MPO InChI InChI 1.03 InChI=1S/C7H15NO4S/c9-13(10,11)7-1-2-8-3-5-12-6-4-8/h1-7H2,(H,9,10,11)
MPO InChIKey InChI 1.03 DVLFYONBTKHTER-UHFFFAOYSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
MPO "SYSTEMATIC NAME" ACDLabs 10.04 "3-morpholin-4-ylpropane-1-sulfonic acid"
MPO "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "3-morpholin-4-ylpropane-1-sulfonic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
MPO 'Create component' 2000-05-16 RCSB
MPO 'Modify descriptor' 2011-06-04 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id MPO
_pdbe_chem_comp_drugbank_details.drugbank_id DB03434
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name '3-(N-morpholino)propanesulfonic acid'
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number 1132-61-2
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
loop_
_pdbe_chem_comp_synonyms.comp_id
_pdbe_chem_comp_synonyms.name
_pdbe_chem_comp_synonyms.provenance
_pdbe_chem_comp_synonyms.type
MPO '3-morpholinopropanesulfonic acid' DrugBank ?
MPO MOPS DrugBank ?
MPO 'Morpholinopropane sulfonic acid' DrugBank ?
#
_pdbe_chem_comp_drugbank_classification.comp_id MPO
_pdbe_chem_comp_drugbank_classification.drugbank_id DB03434
_pdbe_chem_comp_drugbank_classification.parent Morpholines
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class Oxazinanes
_pdbe_chem_comp_drugbank_classification.superclass 'Organoheterocyclic compounds'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as morpholines. These are organic compounds containing a morpholine moiety, which consists of a six-member aliphatic saturated ring with the formula C4H9NO, where the oxygen and nitrogen atoms lie at positions 1 and 4, respectively.'
#
loop_
_pdbe_chem_comp_drugbank_targets.comp_id
_pdbe_chem_comp_drugbank_targets.drugbank_id
_pdbe_chem_comp_drugbank_targets.name
_pdbe_chem_comp_drugbank_targets.organism
_pdbe_chem_comp_drugbank_targets.uniprot_id
_pdbe_chem_comp_drugbank_targets.pharmacologically_active
_pdbe_chem_comp_drugbank_targets.ordinal
MPO DB03434 'Phosphoribosylglycinamide formyltransferase 2' 'Escherichia coli (strain K12)' P33221 unknown 1
MPO DB03434 Alpha-xylosidase 'Escherichia coli (strain K12)' P31434 unknown 2
MPO DB03434 Granulysin Humans P22749 unknown 3
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
MPO S1 S 4.299 -2.910 1
MPO O1 O 3.000 -3.660 2
MPO O2 O 5.049 -4.209 3
MPO O4 O 6.897 4.590 4
MPO N1 N 6.897 1.590 5
MPO C1 C 5.598 -2.160 6
MPO O3 O 3.549 -1.611 7
MPO C2 C 5.598 -0.660 8
MPO C3 C 6.897 0.090 9
MPO C4 C 8.196 2.340 10
MPO C5 C 8.196 3.840 11
MPO C6 C 5.598 3.840 12
MPO C7 C 5.598 2.340 13
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
MPO S1 O1 DOUBLE NONE 1
MPO S1 O2 DOUBLE NONE 2
MPO S1 C1 SINGLE NONE 3
MPO S1 O3 SINGLE NONE 4
MPO O4 C5 SINGLE NONE 5
MPO O4 C6 SINGLE NONE 6
MPO N1 C3 SINGLE NONE 7
MPO N1 C4 SINGLE NONE 8
MPO N1 C7 SINGLE NONE 9
MPO C1 C2 SINGLE NONE 10
MPO C2 C3 SINGLE NONE 11
MPO C4 C5 SINGLE NONE 12
MPO C6 C7 SINGLE NONE 13
#
_pdbe_chem_comp_substructure.comp_id MPO
_pdbe_chem_comp_substructure.substructure_name MurckoScaffold
_pdbe_chem_comp_substructure.id S1
_pdbe_chem_comp_substructure.substructure_type scaffold
_pdbe_chem_comp_substructure.substructure_smiles C1COCCN1
_pdbe_chem_comp_substructure.substructure_inchis InChI=1S/C4H9NO/c1-3-6-4-2-5-1/h5H,1-4H2
_pdbe_chem_comp_substructure.substructure_inchikeys YNAVUWVOSKDBBP-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
MPO O4 S1 1
MPO N1 S1 1
MPO C4 S1 1
MPO C5 S1 1
MPO C6 S1 1
MPO C7 S1 1
#
_pdbe_chem_comp_rdkit_properties.comp_id MPO
_pdbe_chem_comp_rdkit_properties.exactmw 209.072
_pdbe_chem_comp_rdkit_properties.amw 209.267
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 5
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 5
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 13
_pdbe_chem_comp_rdkit_properties.NumAtoms 28
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 6
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 1
_pdbe_chem_comp_rdkit_properties.NumRings 1
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 99.586
_pdbe_chem_comp_rdkit_properties.tpsa 66.840
_pdbe_chem_comp_rdkit_properties.CrippenClogP -0.404
_pdbe_chem_comp_rdkit_properties.CrippenMR 48.292
_pdbe_chem_comp_rdkit_properties.chi0v 6.805
_pdbe_chem_comp_rdkit_properties.chi1v 4.191
_pdbe_chem_comp_rdkit_properties.chi2v 1.113
_pdbe_chem_comp_rdkit_properties.chi3v 1.113
_pdbe_chem_comp_rdkit_properties.chi4v 0.558
_pdbe_chem_comp_rdkit_properties.chi0n 20.988
_pdbe_chem_comp_rdkit_properties.chi1n 10.191
_pdbe_chem_comp_rdkit_properties.chi2n 0.761
_pdbe_chem_comp_rdkit_properties.chi3n 0.761
_pdbe_chem_comp_rdkit_properties.chi4n 0.388
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -0.170
_pdbe_chem_comp_rdkit_properties.kappa1 2.318
_pdbe_chem_comp_rdkit_properties.kappa2 4.899
_pdbe_chem_comp_rdkit_properties.kappa3 5.198
_pdbe_chem_comp_rdkit_properties.Phi 0.874
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
MPO UniChem ChEMBL CHEMBL1234443
MPO UniChem DrugBank DB03434
MPO UniChem PDBe MPO
MPO UniChem ChEBI 39076
MPO UniChem ChEBI 44115
MPO UniChem ZINC ZINC000002004377
MPO UniChem fdasrs 273BP63NV3
MPO UniChem HMDB HMDB0254880
MPO UniChem 'PubChem TPHARMA' 15266539
MPO UniChem NMRShiftDB 20112729
MPO UniChem 'EPA CompTox Dashboard' DTXSID4044371
MPO UniChem BRENDA 106574
MPO UniChem BRENDA 106575
MPO UniChem BRENDA 13197
MPO UniChem BRENDA 206765
MPO UniChem BRENDA 215096
MPO UniChem BRENDA 242081
MPO UniChem BRENDA 29353
MPO UniChem BRENDA 44432
MPO UniChem ChemicalBook CB0221586
MPO UniChem MedChemExpress HY-D0859
MPO UniChem 'Probes And Drugs' PD006992
MPO UniChem Nikkaji J7.270B
MPO UniChem eMolecules 529314
MPO UniChem eMolecules 712152
MPO UniChem SureChEMBL SCHEMBL15732
MPO UniChem PubChem 2723950
MPO UniChem PubChem 70807
MPO UniChem Mcule MCULE-9768701257
MPO UniChem ACTor 1132-61-2
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
MPO S1 3.910 -0.417 1.037 ETKDGv3 1
MPO O1 5.257 -0.883 0.563 ETKDGv3 2
MPO O2 3.542 -1.148 2.298 ETKDGv3 3
MPO O4 -3.553 0.402 0.262 ETKDGv3 4
MPO N1 -1.102 -0.240 -0.399 ETKDGv3 5
MPO C1 2.696 -0.754 -0.227 ETKDGv3 6
MPO O3 3.962 1.237 1.338 ETKDGv3 7
MPO C2 1.310 -0.270 0.208 ETKDGv3 8
MPO C3 0.264 -0.539 -0.883 ETKDGv3 9
MPO C4 -2.104 -0.833 -1.304 ETKDGv3 10
MPO C5 -3.529 -0.570 -0.769 ETKDGv3 11
MPO C6 -2.830 1.545 -0.144 ETKDGv3 12
MPO C7 -1.330 1.218 -0.274 ETKDGv3 13
MPO H11 2.676 -1.848 -0.417 ETKDGv3 14
MPO H12 3.002 -0.234 -1.161 ETKDGv3 15
MPO HO3 4.646 1.346 2.046 ETKDGv3 16
MPO H21 1.363 0.819 0.416 ETKDGv3 17
MPO H22 1.010 -0.798 1.139 ETKDGv3 18
MPO H31 0.503 0.052 -1.797 ETKDGv3 19
MPO H32 0.336 -1.616 -1.157 ETKDGv3 20
MPO H41 -1.951 -1.933 -1.382 ETKDGv3 21
MPO H42 -2.006 -0.399 -2.325 ETKDGv3 22
MPO H51 -4.203 -0.264 -1.599 ETKDGv3 23
MPO H52 -3.937 -1.516 -0.353 ETKDGv3 24
MPO H61 -3.228 1.943 -1.106 ETKDGv3 25
MPO H62 -2.970 2.344 0.615 ETKDGv3 26
MPO H71 -0.816 1.585 0.641 ETKDGv3 27
MPO H72 -0.917 1.771 -1.148 ETKDGv3 28
#