data_MVN
#
_chem_comp.id MVN
_chem_comp.name 6-chloro-4-methyl-1H-quinolin-2-one
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C10 H8 Cl N O"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2014-02-26
_chem_comp.pdbx_modified_date 2015-02-06
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 193.630
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code MVN
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4CRE
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
MVN C1 C1 C 0 1 Y N N N N N 18.496 11.738 48.542 -0.418 -1.936 -0.000 C1 MVN 1
MVN C2 C2 C 0 1 Y N N N N N 18.869 11.924 47.225 -1.742 -1.554 0.000 C2 MVN 2
MVN C3 C3 C 0 1 Y N N N N N 21.161 12.107 47.898 -1.119 0.764 0.000 C3 MVN 3
MVN C4 C4 C 0 1 Y N N N N N 20.789 11.921 49.217 0.229 0.394 -0.000 C4 MVN 4
MVN C5 C5 C 0 1 Y N N N N N 19.460 11.744 49.527 0.582 -0.969 -0.001 C5 MVN 5
MVN C6 C6 C 0 1 Y N N N N N 20.197 12.113 46.906 -2.092 -0.210 0.000 C6 MVN 6
MVN C7 C7 C 0 1 N N N N N N 21.407 11.726 51.574 2.581 0.984 0.000 C7 MVN 7
MVN C8 C8 C 0 1 N N N N N N 21.767 11.906 50.298 1.291 1.402 0.000 C8 MVN 8
MVN C9 C9 C 0 1 N N N N N N 19.977 11.541 51.919 2.882 -0.395 -0.000 C9 MVN 9
MVN C10 C10 C 0 1 N N N N N N 23.194 12.099 49.924 0.957 2.871 -0.000 C10 MVN 10
MVN N11 N11 N 0 1 N N N N N N 19.087 11.568 50.865 1.914 -1.328 -0.001 N11 MVN 11
MVN O12 O12 O 0 1 N N N N N N 19.649 11.380 53.092 4.048 -0.748 0.001 O12 MVN 12
MVN CL1 CL1 CL 0 0 N N N N N N 20.655 12.359 45.247 -3.768 0.244 0.000 CL1 MVN 13
MVN H1 H1 H 0 1 N N N N N N 17.457 11.589 48.798 -0.157 -2.984 0.004 H1 MVN 14
MVN H2 H2 H 0 1 N N N N N N 18.121 11.921 46.446 -2.515 -2.308 0.001 H2 MVN 15
MVN H3 H3 H 0 1 N N N N N N 22.201 12.247 47.643 -1.396 1.808 0.001 H3 MVN 16
MVN H11 H11 H 0 1 N N N N N N 18.115 11.455 51.070 2.156 -2.267 -0.001 H11 MVN 17
MVN H7 H7 H 0 1 N N N N N N 22.157 11.715 52.351 3.381 1.710 0.001 H7 MVN 18
MVN H101 H101 H 0 0 N N N N N N 23.818 12.066 50.829 0.876 3.226 1.027 H101 MVN 19
MVN H102 H102 H 0 0 N N N N N N 23.504 11.299 49.235 1.745 3.423 -0.514 H102 MVN 20
MVN H103 H103 H 0 0 N N N N N N 23.315 13.075 49.431 0.009 3.029 -0.515 H103 MVN 21
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
MVN C1 C2 SING Y N 1
MVN C1 C5 DOUB Y N 2
MVN C2 C6 DOUB Y N 3
MVN C3 C4 DOUB Y N 4
MVN C3 C6 SING Y N 5
MVN C4 C5 SING Y N 6
MVN C4 C8 SING N N 7
MVN C5 N11 SING N N 8
MVN C6 CL1 SING N N 9
MVN C7 C8 DOUB N N 10
MVN C7 C9 SING N N 11
MVN C8 C10 SING N N 12
MVN C9 N11 SING N N 13
MVN C9 O12 DOUB N N 14
MVN C1 H1 SING N N 15
MVN C2 H2 SING N N 16
MVN C3 H3 SING N N 17
MVN N11 H11 SING N N 18
MVN C7 H7 SING N N 19
MVN C10 H101 SING N N 20
MVN C10 H102 SING N N 21
MVN C10 H103 SING N N 22
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
MVN SMILES ACDLabs 12.01 Clc2ccc1c(C(=CC(=O)N1)C)c2
MVN InChI InChI 1.03 InChI=1S/C10H8ClNO/c1-6-4-10(13)12-9-3-2-7(11)5-8(6)9/h2-5H,1H3,(H,12,13)
MVN InChIKey InChI 1.03 VQMIYHVFVPSLGB-UHFFFAOYSA-N
MVN SMILES_CANONICAL CACTVS 3.385 CC1=CC(=O)Nc2ccc(Cl)cc12
MVN SMILES CACTVS 3.385 CC1=CC(=O)Nc2ccc(Cl)cc12
MVN SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 CC1=CC(=O)Nc2c1cc(cc2)Cl
MVN SMILES "OpenEye OEToolkits" 1.7.6 CC1=CC(=O)Nc2c1cc(cc2)Cl
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
MVN "SYSTEMATIC NAME" ACDLabs 12.01 6-chloro-4-methylquinolin-2(1H)-one
MVN "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 6-chloranyl-4-methyl-1H-quinolin-2-one
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
MVN 'Create component' 2014-02-26 EBI
MVN 'Initial release' 2015-02-11 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
MVN C1 C 5.655 -1.837 1
MVN C2 C 4.296 -1.066 2
MVN C3 C 5.655 1.267 3
MVN C4 C 6.996 0.465 4
MVN C5 C 6.996 -1.035 5
MVN C6 C 4.296 0.496 6
MVN C7 C 9.594 0.465 7
MVN C8 C 8.295 1.215 8
MVN C9 C 9.594 -1.035 9
MVN C10 C 8.295 2.715 10
MVN N11 N 8.295 -1.785 11
MVN O12 O 10.893 -1.785 12
MVN CL1 Cl 3.000 1.251 13
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
MVN C1 C2 DOUBLE NONE 1
MVN C1 C5 SINGLE NONE 2
MVN C2 C6 SINGLE NONE 3
MVN C3 C4 SINGLE NONE 4
MVN C3 C6 DOUBLE NONE 5
MVN C4 C5 DOUBLE NONE 6
MVN C4 C8 SINGLE NONE 7
MVN C5 N11 SINGLE NONE 8
MVN C6 CL1 SINGLE NONE 9
MVN C7 C8 DOUBLE NONE 10
MVN C7 C9 SINGLE NONE 11
MVN C8 C10 SINGLE NONE 12
MVN C9 N11 SINGLE NONE 13
MVN C9 O12 DOUBLE NONE 14
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
MVN MurckoScaffold S1 scaffold 'O=c1ccc2ccccc2[nH]1' InChI=1S/C9H7NO/c11-9-6-5-7-3-1-2-4-8(7)10-9/h1-6H,(H,10,11) LISFMEBWQUVKPJ-UHFFFAOYSA-N
MVN phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
MVN pyridine F2 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
MVN quinoline F3 fragment c1ccc2ncccc2c1 InChI=1S/C9H7N/c1-2-6-9-8(4-1)5-3-7-10-9/h1-7H SMWDFEZZVXVKRB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
MVN C1 S1 1
MVN C2 S1 1
MVN C3 S1 1
MVN C4 S1 1
MVN C5 S1 1
MVN C6 S1 1
MVN C7 S1 1
MVN C8 S1 1
MVN C9 S1 1
MVN N11 S1 1
MVN O12 S1 1
MVN C1 F1 1
MVN C2 F1 1
MVN C6 F1 1
MVN C3 F1 1
MVN C4 F1 1
MVN C5 F1 1
MVN C5 F2 1
MVN C4 F2 1
MVN C8 F2 1
MVN C7 F2 1
MVN C9 F2 1
MVN N11 F2 1
MVN C6 F3 1
MVN C3 F3 1
MVN C4 F3 1
MVN C5 F3 1
MVN C1 F3 1
MVN C2 F3 1
MVN N11 F3 1
MVN C9 F3 1
MVN C7 F3 1
MVN C8 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id MVN
_pdbe_chem_comp_rdkit_properties.exactmw 193.029
_pdbe_chem_comp_rdkit_properties.amw 193.633
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 2
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 1
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 1
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 13
_pdbe_chem_comp_rdkit_properties.NumAtoms 21
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 3
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.100
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 91.460
_pdbe_chem_comp_rdkit_properties.tpsa 32.860
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.907
_pdbe_chem_comp_rdkit_properties.CrippenMR 51.952
_pdbe_chem_comp_rdkit_properties.chi0v 6.989
_pdbe_chem_comp_rdkit_properties.chi1v 3.718
_pdbe_chem_comp_rdkit_properties.chi2v 1.646
_pdbe_chem_comp_rdkit_properties.chi3v 1.646
_pdbe_chem_comp_rdkit_properties.chi4v 1.082
_pdbe_chem_comp_rdkit_properties.chi0n 14.233
_pdbe_chem_comp_rdkit_properties.chi1n 7.288
_pdbe_chem_comp_rdkit_properties.chi2n 1.457
_pdbe_chem_comp_rdkit_properties.chi3n 1.457
_pdbe_chem_comp_rdkit_properties.chi4n 0.940
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.280
_pdbe_chem_comp_rdkit_properties.kappa1 3.137
_pdbe_chem_comp_rdkit_properties.kappa2 2.890
_pdbe_chem_comp_rdkit_properties.kappa3 1.449
_pdbe_chem_comp_rdkit_properties.Phi 0.697
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
MVN UniChem ChEMBL CHEMBL1581299
MVN UniChem PDBe MVN
MVN UniChem ZINC ZINC000008681117
MVN UniChem eMolecules 1557047
MVN UniChem eMolecules 4884772
MVN UniChem ChemicalBook CB81503249
MVN UniChem 'EPA CompTox Dashboard' DTXSID90345679
MVN UniChem SureChEMBL SCHEMBL3151814
MVN UniChem PubChem 606322
MVN UniChem Mcule MCULE-3254391362
MVN UniChem Nikkaji J1.402.576F
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
MVN C1 -2.352 0.481 -0.217 ETKDGv3 1
MVN C2 -2.794 -0.774 -0.088 ETKDGv3 2
MVN C3 -0.522 -1.626 0.171 ETKDGv3 3
MVN C4 -0.011 -0.233 0.029 ETKDGv3 4
MVN C5 -0.902 0.773 -0.158 ETKDGv3 5
MVN C6 -1.836 -1.878 0.116 ETKDGv3 6
MVN C7 1.900 1.325 -0.042 ETKDGv3 7
MVN C8 1.458 0.062 0.089 ETKDGv3 8
MVN C9 0.947 2.421 -0.244 ETKDGv3 9
MVN C10 2.452 -1.050 0.296 ETKDGv3 10
MVN N11 -0.449 2.127 -0.299 ETKDGv3 11
MVN O12 1.354 3.607 -0.367 ETKDGv3 12
MVN CL1 -2.428 -3.521 0.284 ETKDGv3 13
MVN H1 -3.061 1.286 -0.366 ETKDGv3 14
MVN H2 -3.856 -0.981 -0.132 ETKDGv3 15
MVN H3 0.163 -2.450 0.321 ETKDGv3 16
MVN H11 -1.137 2.901 -0.443 ETKDGv3 17
MVN H7 2.958 1.553 -0.000 ETKDGv3 18
MVN H101 2.368 -1.785 -0.532 ETKDGv3 19
MVN H102 2.249 -1.558 1.262 ETKDGv3 20
MVN H103 3.499 -0.679 0.318 ETKDGv3 21
#