data_N6I
#
_chem_comp.id N6I
_chem_comp.name
(3M)-4-{[(2S)-2-(3-chlorophenyl)-2-hydroxyethyl]amino}-3-[4-methyl-6-(morpholin-4-yl)-1H-benzimidazol-2-yl]pyridin-2(1H)-one
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C25 H26 Cl N5 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2022-03-24
_chem_comp.pdbx_modified_date 2023-03-31
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 479.959
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code N6I
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7UG5
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
N6I C11 C1 C 0 1 Y N N N N N 12.179 -0.584 49.192 4.817 -1.045 -0.570 C11 N6I 1
N6I C12 C2 C 0 1 Y N N N N N 12.470 -1.881 48.695 5.610 -0.834 -1.683 C12 N6I 2
N6I C13 C3 C 0 1 Y N N N N N 11.680 -2.998 49.038 6.954 -1.153 -1.645 C13 N6I 3
N6I C14 C4 C 0 1 Y N N N N N 10.593 -2.865 49.878 7.507 -1.683 -0.494 C14 N6I 4
N6I C15 C5 C 0 1 Y N N N N N 10.314 -1.599 50.377 6.715 -1.893 0.620 C15 N6I 5
N6I C17 C6 C 0 1 Y N N N N N 11.083 -0.465 50.066 5.369 -1.574 0.581 C17 N6I 6
N6I C18 C7 C 0 1 N N N N N N 15.020 0.356 53.258 0.010 2.764 0.053 C18 N6I 7
N6I C19 C8 C 0 1 Y N N N N N 13.762 0.948 53.817 -1.012 1.705 0.061 C19 N6I 8
N6I C21 C9 C 0 1 Y N N N N N 12.136 1.731 55.214 -2.957 0.656 0.250 C21 N6I 9
N6I C22 C10 C 0 1 Y N N N N N 11.364 2.115 56.353 -4.260 0.217 0.427 C22 N6I 10
N6I C23 C11 C 0 1 Y N N N N N 10.096 2.709 56.168 -4.563 -1.123 0.243 C23 N6I 11
N6I C25 C12 C 0 1 N N N N N N 9.293 2.171 58.568 -6.370 -2.246 -0.789 C25 N6I 12
N6I C26 C13 C 0 1 N N N N N N 9.203 2.893 59.908 -7.785 -2.771 -0.532 C26 N6I 13
N6I C28 C14 C 0 1 N N N N N N 8.166 4.743 58.823 -8.176 -1.004 1.037 C28 N6I 14
N6I C29 C15 C 0 1 N N N N N N 8.216 4.032 57.484 -6.765 -0.461 0.796 C29 N6I 15
N6I C02 C16 C 0 1 N N N N N N 16.050 -0.082 54.176 -0.354 4.116 0.245 C02 N6I 16
N6I C04 C17 C 0 1 N N N N N N 17.577 -0.803 52.443 1.903 4.770 0.045 C04 N6I 17
N6I C05 C18 C 0 1 N N N N N N 16.641 -0.391 51.520 2.307 3.494 -0.139 C05 N6I 18
N6I C06 C19 C 0 1 N N N N N N 15.348 0.194 51.893 1.363 2.450 -0.139 C06 N6I 19
N6I C08 C20 C 0 1 N N N N N N 14.491 0.525 49.476 3.186 0.816 -0.404 C08 N6I 20
N6I C09 C21 C 0 1 N N S N N N 13.097 0.650 48.772 3.353 -0.691 -0.610 C09 N6I 21
N6I C30 C22 C 0 1 Y N N N N N 9.620 2.878 54.839 -3.565 -2.026 -0.117 C30 N6I 22
N6I C31 C23 C 0 1 Y N N N N N 10.373 2.502 53.701 -2.278 -1.605 -0.294 C31 N6I 23
N6I C32 C24 C 0 1 N N N N N N 9.883 2.670 52.316 -1.209 -2.593 -0.684 C32 N6I 24
N6I C33 C25 C 0 1 Y N N N N N 11.654 1.922 53.926 -1.952 -0.257 -0.113 C33 N6I 25
N6I N03 N1 N 0 1 N N N N N N 17.300 -0.668 53.829 0.592 5.074 0.236 N03 N6I 26
N6I N07 N2 N 0 1 N N N N N N 14.431 0.579 50.949 1.761 1.143 -0.324 N07 N6I 27
N6I N20 N3 N 0 1 Y N N N N N 13.462 1.124 55.147 -2.340 1.890 0.352 N20 N6I 28
N6I N24 N4 N 0 1 N N N N N N 9.334 3.060 57.371 -5.876 -1.570 0.419 N24 N6I 29
N6I N34 N5 N 0 1 Y N N N N N 12.658 1.444 53.104 -0.792 0.440 -0.215 N34 N6I 30
N6I O01 O1 O 0 1 N N N N N N 15.952 -0.005 55.437 -1.524 4.415 0.419 O01 N6I 31
N6I O10 O2 O 0 1 N N N N N N 13.399 0.650 47.437 2.808 -1.061 -1.878 O10 N6I 32
N6I O27 O3 O 0 1 N N N N N N 8.071 3.805 59.955 -8.627 -1.684 -0.138 O27 N6I 33
N6I CL16 CL1 CL 0 0 N N N N N N 8.902 -1.469 51.409 7.408 -2.558 2.066 CL16 N6I 34
N6I H1 H1 H 0 1 N N N N N N 13.317 -2.016 48.038 5.178 -0.421 -2.583 H1 N6I 35
N6I H2 H2 H 0 1 N N N N N N 11.929 -3.970 48.638 7.573 -0.988 -2.515 H2 N6I 36
N6I H3 H3 H 0 1 N N N N N N 9.981 -3.716 50.138 8.557 -1.932 -0.465 H3 N6I 37
N6I H4 H4 H 0 1 N N N N N N 10.834 0.494 50.496 4.750 -1.738 1.451 H4 N6I 38
N6I H5 H5 H 0 1 N N N N N N 11.748 1.952 57.349 -5.035 0.915 0.706 H5 N6I 39
N6I H6 H6 H 0 1 N N N N N N 8.415 1.515 58.475 -5.712 -3.079 -1.035 H6 N6I 40
N6I H7 H7 H 0 1 N N N N N N 10.208 1.561 58.571 -6.389 -1.540 -1.620 H7 N6I 41
N6I H8 H8 H 0 1 N N N N N N 9.092 2.146 60.708 -8.177 -3.222 -1.444 H8 N6I 42
N6I H9 H9 H 0 1 N N N N N N 10.129 3.466 60.067 -7.758 -3.517 0.262 H9 N6I 43
N6I H10 H10 H 0 1 N N N N N N 9.080 5.344 58.938 -8.160 -1.699 1.877 H10 N6I 44
N6I H11 H11 H 0 1 N N N N N N 7.288 5.405 58.839 -8.851 -0.178 1.261 H11 N6I 45
N6I H12 H12 H 0 1 N N N N N N 8.330 4.787 56.693 -6.790 0.274 -0.009 H12 N6I 46
N6I H13 H13 H 0 1 N N N N N N 7.269 3.491 57.341 -6.395 0.009 1.707 H13 N6I 47
N6I H14 H14 H 0 1 N N N N N N 18.515 -1.226 52.115 2.635 5.563 0.043 H14 N6I 48
N6I H15 H15 H 0 1 N N N N N N 16.870 -0.504 50.471 3.354 3.275 -0.285 H15 N6I 49
N6I H16 H16 H 0 1 N N N N N N 14.940 -0.436 49.184 3.680 1.113 0.521 H16 N6I 50
N6I H17 H17 H 0 1 N N N N N N 15.129 1.350 49.126 3.635 1.349 -1.242 H17 N6I 51
N6I H18 H18 H 0 1 N N N N N N 12.610 1.584 49.090 2.828 -1.226 0.181 H18 N6I 52
N6I H19 H19 H 0 1 N N N N N N 8.642 3.312 54.691 -3.812 -3.068 -0.257 H19 N6I 53
N6I H20 H20 H 0 1 N N N N N N 9.334 1.768 52.009 -0.755 -3.011 0.214 H20 N6I 54
N6I H21 H21 H 0 1 N N N N N N 9.213 3.541 52.267 -1.653 -3.395 -1.274 H21 N6I 55
N6I H22 H22 H 0 1 N N N N N N 10.738 2.826 51.641 -0.445 -2.088 -1.275 H22 N6I 56
N6I H23 H23 H 0 1 N N N N N N 17.950 -0.969 54.526 0.332 6.000 0.364 H23 N6I 57
N6I H24 H24 H 0 1 N N N N N N 14.270 1.545 51.149 1.097 0.440 -0.401 H24 N6I 58
N6I H25 H25 H 0 1 N N N N N N 14.043 0.882 55.924 -2.766 2.730 0.587 H25 N6I 59
N6I H27 H27 H 0 1 N N N N N N 13.945 1.401 47.235 3.228 -0.623 -2.630 H27 N6I 60
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
N6I O10 C09 SING N N 1
N6I C12 C13 DOUB Y N 2
N6I C12 C11 SING Y N 3
N6I C09 C11 SING N N 4
N6I C09 C08 SING N N 5
N6I C13 C14 SING Y N 6
N6I C11 C17 DOUB Y N 7
N6I C08 N07 SING N N 8
N6I C14 C15 DOUB Y N 9
N6I C17 C15 SING Y N 10
N6I C15 CL16 SING N N 11
N6I N07 C06 SING N N 12
N6I C05 C06 SING N N 13
N6I C05 C04 DOUB N N 14
N6I C06 C18 DOUB N N 15
N6I C32 C31 SING N N 16
N6I C04 N03 SING N N 17
N6I N34 C19 DOUB Y N 18
N6I N34 C33 SING Y N 19
N6I C18 C19 SING N N 20
N6I C18 C02 SING N N 21
N6I C31 C33 DOUB Y N 22
N6I C31 C30 SING Y N 23
N6I C19 N20 SING Y N 24
N6I N03 C02 SING N N 25
N6I C33 C21 SING Y N 26
N6I C02 O01 DOUB N N 27
N6I C30 C23 DOUB Y N 28
N6I N20 C21 SING Y N 29
N6I C21 C22 DOUB Y N 30
N6I C23 C22 SING Y N 31
N6I C23 N24 SING N N 32
N6I N24 C29 SING N N 33
N6I N24 C25 SING N N 34
N6I C29 C28 SING N N 35
N6I C25 C26 SING N N 36
N6I C28 O27 SING N N 37
N6I C26 O27 SING N N 38
N6I C12 H1 SING N N 39
N6I C13 H2 SING N N 40
N6I C14 H3 SING N N 41
N6I C17 H4 SING N N 42
N6I C22 H5 SING N N 43
N6I C25 H6 SING N N 44
N6I C25 H7 SING N N 45
N6I C26 H8 SING N N 46
N6I C26 H9 SING N N 47
N6I C28 H10 SING N N 48
N6I C28 H11 SING N N 49
N6I C29 H12 SING N N 50
N6I C29 H13 SING N N 51
N6I C04 H14 SING N N 52
N6I C05 H15 SING N N 53
N6I C08 H16 SING N N 54
N6I C08 H17 SING N N 55
N6I C09 H18 SING N N 56
N6I C30 H19 SING N N 57
N6I C32 H20 SING N N 58
N6I C32 H21 SING N N 59
N6I C32 H22 SING N N 60
N6I N03 H23 SING N N 61
N6I N07 H24 SING N N 62
N6I N20 H25 SING N N 63
N6I O10 H27 SING N N 64
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
N6I SMILES ACDLabs 12.01 Clc1cccc(c1)C(O)CNC=1C=CNC(=O)C=1c1nc2c(cc(cc2C)N2CCOCC2)[NH]1
N6I InChI InChI 1.03 InChI=1S/C25H26ClN5O3/c1-15-11-18(31-7-9-34-10-8-31)13-20-23(15)30-24(29-20)22-19(5-6-27-25(22)33)28-14-21(32)16-3-2-4-17(26)12-16/h2-6,11-13,21,32H,7-10,14H2,1H3,(H,29,30)(H2,27,28,33)/t21-/m1/s1
N6I InChIKey InChI 1.03 ZWVZORIKUNOTCS-OAQYLSRUSA-N
N6I SMILES_CANONICAL CACTVS 3.385 Cc1cc(cc2[nH]c(nc12)C3=C(NC[C@@H](O)c4cccc(Cl)c4)C=CNC3=O)N5CCOCC5
N6I SMILES CACTVS 3.385 Cc1cc(cc2[nH]c(nc12)C3=C(NC[CH](O)c4cccc(Cl)c4)C=CNC3=O)N5CCOCC5
N6I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 Cc1cc(cc2c1nc([nH]2)C3=C(C=CNC3=O)NC[C@H](c4cccc(c4)Cl)O)N5CCOCC5
N6I SMILES "OpenEye OEToolkits" 2.0.7 Cc1cc(cc2c1nc([nH]2)C3=C(C=CNC3=O)NCC(c4cccc(c4)Cl)O)N5CCOCC5
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
N6I "SYSTEMATIC NAME" ACDLabs 12.01 (3M)-4-{[(2S)-2-(3-chlorophenyl)-2-hydroxyethyl]amino}-3-[4-methyl-6-(morpholin-4-yl)-1H-benzimidazol-2-yl]pyridin-2(1H)-one
N6I "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 4-[[(2~{S})-2-(3-chlorophenyl)-2-oxidanyl-ethyl]amino]-3-(4-methyl-6-morpholin-4-yl-1~{H}-benzimidazol-2-yl)-1~{H}-pyridin-2-one
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
N6I 'Create component' 2022-03-24 RCSB
N6I 'Initial release' 2023-04-05 RCSB
#
_pdbe_chem_comp_synonyms.comp_id N6I
_pdbe_chem_comp_synonyms.name BMS-536924
_pdbe_chem_comp_synonyms.provenance ChEMBL
_pdbe_chem_comp_synonyms.type 'Research Code'
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
N6I C11 C 14.040 -3.174 1
N6I C12 C 15.540 -3.174 2
N6I C13 C 16.290 -4.473 3
N6I C14 C 15.540 -5.772 4
N6I C15 C 14.040 -5.772 5
N6I C17 C 13.290 -4.473 6
N6I C18 C 13.290 3.321 7
N6I C19 C 11.790 3.321 8
N6I C21 C 9.495 4.071 9
N6I C22 C 8.196 4.821 10
N6I C23 C 6.897 4.071 11
N6I C25 C 5.598 6.321 12
N6I C26 C 4.299 7.071 13
N6I C28 C 3.000 4.821 14
N6I C29 C 4.299 4.071 15
N6I C02 C 14.040 4.620 16
N6I C04 C 16.290 3.321 17
N6I C05 C 15.540 2.022 18
N6I C06 C 14.040 2.022 19
N6I C08 C 14.040 -0.576 20
N6I C09 C 13.290 -1.875 21
N6I C30 C 6.897 2.571 22
N6I C31 C 8.196 1.821 23
N6I C32 C 8.196 0.321 24
N6I C33 C 9.495 2.571 25
N6I N03 N 15.540 4.620 26
N6I N07 N 13.290 0.723 27
N6I N20 N 10.915 4.528 28
N6I N24 N 5.598 4.821 29
N6I N34 N 10.915 2.114 30
N6I O01 O 13.290 5.919 31
N6I O10 O 11.790 -1.875 32
N6I O27 O 3.000 6.321 33
N6I CL16 Cl 13.290 -7.071 34
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
N6I C09 O10 SINGLE BEGINDASH 1
N6I C12 C13 DOUBLE NONE 2
N6I C12 C11 SINGLE NONE 3
N6I C09 C11 SINGLE NONE 4
N6I C09 C08 SINGLE NONE 5
N6I C13 C14 SINGLE NONE 6
N6I C11 C17 DOUBLE NONE 7
N6I C08 N07 SINGLE NONE 8
N6I C14 C15 DOUBLE NONE 9
N6I C17 C15 SINGLE NONE 10
N6I C15 CL16 SINGLE NONE 11
N6I N07 C06 SINGLE NONE 12
N6I C05 C06 SINGLE NONE 13
N6I C05 C04 DOUBLE NONE 14
N6I C06 C18 DOUBLE NONE 15
N6I C32 C31 SINGLE NONE 16
N6I C04 N03 SINGLE NONE 17
N6I N34 C19 DOUBLE NONE 18
N6I N34 C33 SINGLE NONE 19
N6I C18 C19 SINGLE NONE 20
N6I C18 C02 SINGLE NONE 21
N6I C31 C33 DOUBLE NONE 22
N6I C31 C30 SINGLE NONE 23
N6I C19 N20 SINGLE NONE 24
N6I N03 C02 SINGLE NONE 25
N6I C33 C21 SINGLE NONE 26
N6I C02 O01 DOUBLE NONE 27
N6I C30 C23 DOUBLE NONE 28
N6I N20 C21 SINGLE NONE 29
N6I C21 C22 DOUBLE NONE 30
N6I C23 C22 SINGLE NONE 31
N6I C23 N24 SINGLE NONE 32
N6I N24 C29 SINGLE NONE 33
N6I N24 C25 SINGLE NONE 34
N6I C29 C28 SINGLE NONE 35
N6I C25 C26 SINGLE NONE 36
N6I C28 O27 SINGLE NONE 37
N6I C26 O27 SINGLE NONE 38
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
N6I MurckoScaffold S1 scaffold 'O=c1[nH]ccc(NCCc2ccccc2)c1-c1nc2ccc(N3CCOCC3)cc2[nH]1' InChI=1S/C24H25N5O2/c30-24-22(20(9-11-26-24)25-10-8-17-4-2-1-3-5-17)23-27-19-7-6-18(16-21(19)28-23)29-12-14-31-15-13-29/h1-7,9,11,16H,8,10,12-15H2,(H,27,28)(H2,25,26,30) OUVMTESRSNUBIJ-UHFFFAOYSA-N
N6I benzimidazole F1 fragment 'c1ccc2[nH]cnc2c1' InChI=1S/C7H6N2/c1-2-4-7-6(3-1)8-5-9-7/h1-5H,(H,8,9) HYZJCKYKOHLVJF-UHFFFAOYSA-N
N6I imidazole F2 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
N6I phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
N6I pyridine F4 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
N6I Z188745066 F5 fragment 'Cc1nc2cc(N)ccc2[nH]1.Cl' 'InChI=1S/C8H9N3.ClH/c1-5-10-7-3-2-6(9)4-8(7)11-5;/h2-4H,9H2,1H3,(H,10,11);1H' KAQBQAWEULIHIR-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
N6I C11 S1 1
N6I C12 S1 1
N6I C13 S1 1
N6I C14 S1 1
N6I C15 S1 1
N6I C17 S1 1
N6I C18 S1 1
N6I C19 S1 1
N6I C21 S1 1
N6I C22 S1 1
N6I C23 S1 1
N6I C25 S1 1
N6I C26 S1 1
N6I C28 S1 1
N6I C29 S1 1
N6I C02 S1 1
N6I C04 S1 1
N6I C05 S1 1
N6I C06 S1 1
N6I C08 S1 1
N6I C09 S1 1
N6I C30 S1 1
N6I C31 S1 1
N6I C33 S1 1
N6I N03 S1 1
N6I N07 S1 1
N6I N20 S1 1
N6I N24 S1 1
N6I N34 S1 1
N6I O01 S1 1
N6I O27 S1 1
N6I C21 F1 1
N6I N20 F1 1
N6I C19 F1 1
N6I N34 F1 1
N6I C33 F1 1
N6I C31 F1 1
N6I C30 F1 1
N6I C23 F1 1
N6I C22 F1 1
N6I C21 F2 1
N6I C33 F2 1
N6I N34 F2 1
N6I C19 F2 1
N6I N20 F2 1
N6I C11 F3 1
N6I C12 F3 1
N6I C13 F3 1
N6I C14 F3 1
N6I C15 F3 1
N6I C17 F3 1
N6I C21 F3 2
N6I C33 F3 2
N6I C31 F3 2
N6I C30 F3 2
N6I C23 F3 2
N6I C22 F3 2
N6I C02 F4 1
N6I C18 F4 1
N6I C06 F4 1
N6I C05 F4 1
N6I C04 F4 1
N6I N03 F4 1
N6I CL16 F5 1
N6I C18 F5 1
N6I C19 F5 1
N6I N20 F5 1
N6I C21 F5 1
N6I C22 F5 1
N6I C23 F5 1
N6I N24 F5 1
N6I C30 F5 1
N6I C31 F5 1
N6I C33 F5 1
N6I N34 F5 1
#
_pdbe_chem_comp_rdkit_properties.comp_id N6I
_pdbe_chem_comp_rdkit_properties.exactmw 479.172
_pdbe_chem_comp_rdkit_properties.amw 479.968
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 8
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 4
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 8
_pdbe_chem_comp_rdkit_properties.NumHBD 4
_pdbe_chem_comp_rdkit_properties.NumHBA 6
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 34
_pdbe_chem_comp_rdkit_properties.NumAtoms 60
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 9
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.280
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 237.897
_pdbe_chem_comp_rdkit_properties.tpsa 106.270
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.083
_pdbe_chem_comp_rdkit_properties.CrippenMR 129.221
_pdbe_chem_comp_rdkit_properties.chi0v 17.095
_pdbe_chem_comp_rdkit_properties.chi1v 9.343
_pdbe_chem_comp_rdkit_properties.chi2v 4.303
_pdbe_chem_comp_rdkit_properties.chi3v 4.303
_pdbe_chem_comp_rdkit_properties.chi4v 2.826
_pdbe_chem_comp_rdkit_properties.chi0n 42.339
_pdbe_chem_comp_rdkit_properties.chi1n 21.715
_pdbe_chem_comp_rdkit_properties.chi2n 4.114
_pdbe_chem_comp_rdkit_properties.chi3n 4.114
_pdbe_chem_comp_rdkit_properties.chi4n 2.685
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.330
_pdbe_chem_comp_rdkit_properties.kappa1 7.335
_pdbe_chem_comp_rdkit_properties.kappa2 9.499
_pdbe_chem_comp_rdkit_properties.kappa3 4.522
_pdbe_chem_comp_rdkit_properties.Phi 2.049
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
N6I UniChem ChEMBL CHEMBL401930
N6I UniChem PDBe N6I
N6I UniChem ZINC ZINC000006718468
N6I UniChem fdasrs 40E3AZG1MX
N6I UniChem Selleck BMS-536924
N6I UniChem 'PubChem TPHARMA' 16480121
N6I UniChem PubChem 135440466
N6I UniChem BindingDb 27879
N6I UniChem ChemicalBook CB22510062
N6I UniChem MedChemExpress HY-10262
N6I UniChem 'Probes And Drugs' PD003451
N6I UniChem Nikkaji J2.568.805H
N6I UniChem SureChEMBL SCHEMBL15974144
N6I UniChem SureChEMBL SCHEMBL4132577
N6I UniChem 'PubChem TPHARMA' 15406036
N6I UniChem LINCS LSM-1210
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
N6I C11 4.412 0.624 -0.907 ETKDGv3 1
N6I C12 3.848 0.785 0.462 ETKDGv3 2
N6I C13 4.604 0.538 1.538 ETKDGv3 3
N6I C14 6.007 0.111 1.377 ETKDGv3 4
N6I C15 6.528 -0.028 0.151 ETKDGv3 5
N6I C17 5.695 0.239 -1.041 ETKDGv3 6
N6I C18 1.577 -2.083 0.393 ETKDGv3 7
N6I C19 0.216 -1.496 0.353 ETKDGv3 8
N6I C21 -1.446 -0.022 0.113 ETKDGv3 9
N6I C22 -2.231 1.036 -0.080 ETKDGv3 10
N6I C23 -3.688 0.877 0.219 ETKDGv3 11
N6I C25 -4.148 3.345 0.370 ETKDGv3 12
N6I C26 -5.361 4.207 0.734 ETKDGv3 13
N6I C28 -6.858 2.821 -0.361 ETKDGv3 14
N6I C29 -5.769 1.846 -0.817 ETKDGv3 15
N6I C02 1.979 -2.865 1.588 ETKDGv3 16
N6I C04 4.197 -3.234 0.561 ETKDGv3 17
N6I C05 3.824 -2.540 -0.516 ETKDGv3 18
N6I C06 2.471 -1.916 -0.617 ETKDGv3 19
N6I C08 3.045 -0.518 -2.712 ETKDGv3 20
N6I C09 3.548 0.819 -2.138 ETKDGv3 21
N6I C30 -4.149 -0.315 0.686 ETKDGv3 22
N6I C31 -3.223 -1.470 0.886 ETKDGv3 23
N6I C32 -3.710 -2.770 1.450 ETKDGv3 24
N6I C33 -1.933 -1.270 0.600 ETKDGv3 25
N6I N03 3.294 -3.419 1.651 ETKDGv3 26
N6I N07 2.102 -1.197 -1.816 ETKDGv3 27
N6I N20 -0.050 -0.141 -0.058 ETKDGv3 28
N6I N24 -4.589 1.986 0.044 ETKDGv3 29
N6I N34 -0.837 -2.165 0.743 ETKDGv3 30
N6I O01 1.187 -3.028 2.554 ETKDGv3 31
N6I O10 2.454 1.657 -1.867 ETKDGv3 32
N6I O27 -6.349 4.139 -0.277 ETKDGv3 33
N6I CL16 8.191 -0.547 -0.047 ETKDGv3 34
N6I H1 2.820 1.090 0.600 ETKDGv3 35
N6I H2 4.186 0.646 2.531 ETKDGv3 36
N6I H3 6.608 -0.090 2.255 ETKDGv3 37
N6I H4 6.125 0.095 -2.025 ETKDGv3 38
N6I H5 -1.821 1.969 -0.444 ETKDGv3 39
N6I H6 -3.445 3.328 1.232 ETKDGv3 40
N6I H7 -3.630 3.786 -0.509 ETKDGv3 41
N6I H8 -5.775 3.899 1.722 ETKDGv3 42
N6I H9 -5.030 5.263 0.835 ETKDGv3 43
N6I H10 -7.291 2.494 0.612 ETKDGv3 44
N6I H11 -7.682 2.808 -1.105 ETKDGv3 45
N6I H12 -5.482 2.075 -1.866 ETKDGv3 46
N6I H13 -6.173 0.812 -0.785 ETKDGv3 47
N6I H14 5.187 -3.671 0.606 ETKDGv3 48
N6I H15 4.533 -2.452 -1.325 ETKDGv3 49
N6I H16 2.523 -0.297 -3.669 ETKDGv3 50
N6I H17 3.892 -1.180 -2.982 ETKDGv3 51
N6I H18 4.170 1.298 -2.932 ETKDGv3 52
N6I H19 -5.195 -0.429 0.944 ETKDGv3 53
N6I H20 -4.817 -2.835 1.384 ETKDGv3 54
N6I H21 -3.408 -2.850 2.515 ETKDGv3 55
N6I H22 -3.277 -3.622 0.882 ETKDGv3 56
N6I H23 3.597 -3.963 2.489 ETKDGv3 57
N6I H24 1.103 -1.214 -2.122 ETKDGv3 58
N6I H25 0.628 0.609 -0.310 ETKDGv3 59
N6I H27 2.816 2.575 -1.755 ETKDGv3 60
#