data_N7X
#
_chem_comp.id N7X
_chem_comp.name "5'-O-[(R)-hydroxy(sulfanylidene)-lambda~5~-phosphanyl]-2'-O-(2-methoxyethyl)-5-methylcytidine"
_chem_comp.type "RNA linking"
_chem_comp.pdbx_type ATOMN
_chem_comp.formula "C13 H22 N3 O8 P S"
_chem_comp.mon_nstd_parent_comp_id C
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2020-02-11
_chem_comp.pdbx_modified_date 2021-02-05
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 411.368
_chem_comp.one_letter_code C
_chem_comp.three_letter_code N7X
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag Y
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6VRD
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
N7X C C1 C 0 1 N N N N N N 8.557 42.695 20.925 -2.778 -2.710 -1.043 C N7X 1
N7X C1 C2 C 0 1 N N N N N N 8.082 44.129 21.033 -3.727 -3.733 -0.415 C1 N7X 2
N7X "C1'" C3 C 0 1 N N R N N N 8.203 39.793 21.661 -0.904 0.033 0.553 "C1'" N7X 3
N7X C12 C4 C 0 1 N N N N N N 6.313 45.183 22.370 -5.632 -3.924 1.027 C12 N7X 4
N7X C2 C5 C 0 1 N N N N N N 10.533 39.137 21.365 -1.542 1.856 -0.927 C2 N7X 5
N7X "C2'" C6 C 0 1 N N R N N N 7.804 40.509 20.239 -1.104 -1.084 -0.496 "C2'" N7X 6
N7X "C3'" C7 C 0 1 N N R N N N 6.827 39.794 19.826 0.303 -1.699 -0.662 "C3'" N7X 7
N7X C4 C8 C 0 1 N N N N N N 11.195 36.917 21.271 -3.237 3.345 -0.431 C4 N7X 8
N7X "C4'" C9 C 0 1 N N R N N N 5.972 39.569 21.126 1.187 -0.882 0.306 "C4'" N7X 9
N7X C5 C10 C 0 1 N N N N N N 9.863 36.522 21.405 -3.466 2.674 0.788 C5 N7X 10
N7X "C5'" C11 C 0 1 N N N N N N 5.089 38.470 21.014 2.573 -0.655 -0.301 "C5'" N7X 11
N7X C6 C12 C 0 1 N N N N N N 8.866 37.474 21.514 -2.703 1.600 1.099 C6 N7X 12
N7X C7 C13 C 0 1 N N N N N N 9.479 35.021 21.432 -4.543 3.147 1.731 C7 N7X 13
N7X N1 N1 N 0 1 N N N N N N 9.237 38.786 21.507 -1.736 1.195 0.228 N1 N7X 14
N7X N3 N2 N 0 1 N N N N N N 11.499 38.204 21.254 -2.284 2.914 -1.247 N3 N7X 15
N7X N4 N3 N 0 1 N N N N N N 12.280 35.983 21.153 -3.997 4.439 -0.772 N4 N7X 16
N7X O12 O1 O 0 1 N N N N N N 7.345 44.170 22.310 -4.693 -3.055 0.391 O12 N7X 17
N7X O2 O2 O 0 1 N N N N N N 10.825 40.317 21.318 -0.668 1.482 -1.692 O2 N7X 18
N7X "O2'" O3 O 0 1 N N N N N N 7.406 41.880 20.632 -2.026 -2.064 -0.014 "O2'" N7X 19
N7X "O3'" O4 O 0 1 N N N N N N 5.988 40.431 18.785 0.294 -3.078 -0.287 "O3'" N7X 20
N7X "O4'" O5 O 0 1 N N N N N N 7.092 39.260 22.106 0.496 0.377 0.463 "O4'" N7X 21
N7X "O5'" O6 O 0 1 N N N N N N 5.884 37.300 20.878 3.410 -0.000 0.654 "O5'" N7X 22
N7X OP2 O7 O 0 1 N N N N N N 6.214 34.728 20.372 5.688 0.745 1.737 OP2 N7X 23
N7X P P1 P 0 1 N N N N N N 5.212 35.776 20.946 4.942 0.394 0.354 P N7X 24
N7X S S1 S 0 1 N N N N N N 3.291 35.930 20.154 5.802 -1.038 -0.470 S N7X 25
N7X H1 H1 H 0 1 N N N N N N 9.011 42.377 21.875 -2.098 -3.217 -1.727 H1 N7X 26
N7X H2 H2 H 0 1 N N N N N N 9.297 42.604 20.117 -3.357 -1.966 -1.591 H2 N7X 27
N7X H3 H3 H 0 1 N N N N N N 8.936 44.822 21.053 -4.236 -4.287 -1.203 H3 N7X 28
N7X H4 H4 H 0 1 N N N N N N 7.421 44.385 20.192 -3.156 -4.424 0.205 H4 N7X 29
N7X H5 H5 H 0 1 N N N N N N 8.565 40.587 22.330 -1.141 -0.336 1.550 H5 N7X 30
N7X H6 H6 H 0 1 N N N N N N 5.817 45.144 23.351 -5.101 -4.620 1.677 H6 N7X 31
N7X H7 H7 H 0 1 N N N N N N 6.765 46.176 22.227 -6.330 -3.334 1.619 H7 N7X 32
N7X H8 H8 H 0 1 N N N N N N 5.573 45.000 21.577 -6.181 -4.483 0.269 H8 N7X 33
N7X H9 H9 H 0 1 N N N N N N 8.684 40.520 19.579 -1.453 -0.664 -1.439 H9 N7X 34
N7X H10 H10 H 0 1 N N N N N N 7.158 38.809 19.466 0.652 -1.584 -1.688 H10 N7X 35
N7X H11 H11 H 0 1 N N N N N N 5.454 40.499 21.404 1.271 -1.391 1.266 H11 N7X 36
N7X H12 H12 H 0 1 N N N N N N 4.446 38.593 20.130 3.013 -1.616 -0.571 H12 N7X 37
N7X H13 H13 H 0 1 N N N N N N 4.463 38.397 21.916 2.483 -0.034 -1.192 H13 N7X 38
N7X H14 H14 H 0 1 N N N N N N 7.828 37.188 21.602 -2.859 1.069 2.027 H14 N7X 39
N7X H15 H15 H 0 1 N N N N N N 8.389 34.923 21.544 -5.041 4.018 1.306 H15 N7X 40
N7X H16 H16 H 0 1 N N N N N N 9.796 34.545 20.492 -5.270 2.349 1.880 H16 N7X 41
N7X H17 H17 H 0 1 N N N N N N 9.980 34.530 22.279 -4.096 3.415 2.688 H17 N7X 42
N7X H18 H18 H 0 1 N N N N N N 13.219 36.316 21.063 -4.694 4.752 -0.173 H18 N7X 43
N7X H19 H19 H 0 1 N N N N N N 12.097 35.000 21.161 -3.837 4.899 -1.611 H19 N7X 44
N7X "HO3'" H20 H 0 0 N Y N N N N 5.289 39.838 18.534 1.153 -3.515 -0.372 H20 N7X 45
N7X HOP2 H21 H 0 0 N N N N N N 7.038 34.788 20.840 6.616 0.992 1.631 H21 N7X 46
N7X OP3 OP3 O 0 1 N Y N N N N ? ? ? 4.984 1.677 -0.619 OP3 N7X 47
N7X HOP3 H22 H 0 0 N Y N N N N ? ? ? 4.554 2.462 -0.254 H22 N7X 48
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
N7X "O3'" "C3'" SING N N 1
N7X "C3'" "C2'" SING N N 2
N7X "C3'" "C4'" SING N N 3
N7X S P DOUB N N 4
N7X "C2'" "O2'" SING N N 5
N7X "C2'" "C1'" SING N N 6
N7X OP2 P SING N N 7
N7X "O2'" C SING N N 8
N7X "O5'" P SING N N 9
N7X "O5'" "C5'" SING N N 10
N7X C C1 SING N N 11
N7X "C5'" "C4'" SING N N 12
N7X C1 O12 SING N N 13
N7X "C4'" "O4'" SING N N 14
N7X N4 C4 SING N N 15
N7X N3 C4 DOUB N N 16
N7X N3 C2 SING N N 17
N7X C4 C5 SING N N 18
N7X O2 C2 DOUB N N 19
N7X C2 N1 SING N N 20
N7X C5 C7 SING N N 21
N7X C5 C6 DOUB N N 22
N7X N1 C6 SING N N 23
N7X N1 "C1'" SING N N 24
N7X "C1'" "O4'" SING N N 25
N7X O12 C12 SING N N 26
N7X C H1 SING N N 27
N7X C H2 SING N N 28
N7X C1 H3 SING N N 29
N7X C1 H4 SING N N 30
N7X "C1'" H5 SING N N 31
N7X C12 H6 SING N N 32
N7X C12 H7 SING N N 33
N7X C12 H8 SING N N 34
N7X "C2'" H9 SING N N 35
N7X "C3'" H10 SING N N 36
N7X "C4'" H11 SING N N 37
N7X "C5'" H12 SING N N 38
N7X "C5'" H13 SING N N 39
N7X C6 H14 SING N N 40
N7X C7 H15 SING N N 41
N7X C7 H16 SING N N 42
N7X C7 H17 SING N N 43
N7X N4 H18 SING N N 44
N7X N4 H19 SING N N 45
N7X "O3'" "HO3'" SING N N 46
N7X OP2 HOP2 SING N N 47
N7X P OP3 SING N N 48
N7X OP3 HOP3 SING N N 49
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
N7X SMILES ACDLabs 12.01 C(COC)OC1C(OC(C1O)COP(O)(O)=S)N2C(N=C(C(C)=C2)N)=O
N7X InChI InChI 1.03 InChI=1S/C13H22N3O8PS/c1-7-5-16(13(18)15-11(7)14)12-10(22-4-3-21-2)9(17)8(24-12)6-23-25(19,20)26/h5,8-10,12,17H,3-4,6H2,1-2H3,(H2,14,15,18)(H2,19,20,26)/t8-,9-,10-,12-/m1/s1
N7X InChIKey InChI 1.03 UINDLFLAAYRFRN-DNRKLUKYSA-N
N7X SMILES_CANONICAL CACTVS 3.385 COCCO[C@@H]1[C@H](O)[C@@H](CO[P](O)(O)=S)O[C@H]1N2C=C(C)C(=NC2=O)N
N7X SMILES CACTVS 3.385 COCCO[CH]1[CH](O)[CH](CO[P](O)(O)=S)O[CH]1N2C=C(C)C(=NC2=O)N
N7X SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 CC1=CN(C(=O)N=C1N)[C@H]2[C@@H]([C@@H]([C@H](O2)COP(=S)(O)O)O)OCCOC
N7X SMILES "OpenEye OEToolkits" 2.0.7 CC1=CN(C(=O)N=C1N)C2C(C(C(O2)COP(=S)(O)O)O)OCCOC
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
N7X "SYSTEMATIC NAME" ACDLabs 12.01 "2'-O-(2-methoxyethyl)-5-methyl-5'-O-thiophosphonocytidine"
N7X "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 4-azanyl-1-[(2~{R},3~{R},4~{R},5~{R})-5-[bis(oxidanyl)phosphinothioyloxymethyl]-3-(2-methoxyethoxy)-4-oxidanyl-oxolan-2-yl]-5-methyl-pyrimidin-2-one
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
N7X 'Create component' 2020-02-11 RCSB
N7X 'Initial release' 2021-02-10 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
N7X C C 6.968 -1.758 1
N7X C1 C 5.541 -1.295 2
N7X "C1'" C 10.723 -0.337 3
N7X C12 C 3.000 -1.835 4
N7X C2 C 12.022 1.914 5
N7X "C2'" C 9.509 -1.218 6
N7X "C3'" C 9.973 -2.645 7
N7X C4 C 10.723 4.163 8
N7X "C4'" C 11.473 -2.645 9
N7X C5 C 9.424 3.413 10
N7X "C5'" C 12.354 -3.858 11
N7X C6 C 9.424 1.914 12
N7X C7 C 8.125 4.163 13
N7X N1 N 10.723 1.163 14
N7X N3 N 12.022 3.413 15
N7X N4 N 10.723 5.663 16
N7X O12 O 4.427 -2.298 17
N7X O2 O 13.321 1.163 18
N7X "O2'" O 8.083 -0.755 19
N7X "O3'" O 9.091 -3.858 20
N7X "O4'" O 11.936 -1.218 21
N7X "O5'" O 13.846 -3.701 22
N7X OP2 O 13.514 -5.797 23
N7X P P 14.728 -4.915 24
N7X S S 15.610 -6.129 25
N7X OP3 O 15.941 -4.033 26
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
N7X "C3'" "O3'" SINGLE BEGINWEDGE 1
N7X "C3'" "C2'" SINGLE NONE 2
N7X "C3'" "C4'" SINGLE NONE 3
N7X S P DOUBLE NONE 4
N7X "C2'" "O2'" SINGLE BEGINWEDGE 5
N7X "C2'" "C1'" SINGLE NONE 6
N7X OP2 P SINGLE NONE 7
N7X "O2'" C SINGLE NONE 8
N7X "O5'" P SINGLE NONE 9
N7X "O5'" "C5'" SINGLE NONE 10
N7X C C1 SINGLE NONE 11
N7X "C4'" "C5'" SINGLE BEGINDASH 12
N7X C1 O12 SINGLE NONE 13
N7X "C4'" "O4'" SINGLE NONE 14
N7X N4 C4 SINGLE NONE 15
N7X N3 C4 DOUBLE NONE 16
N7X N3 C2 SINGLE NONE 17
N7X C4 C5 SINGLE NONE 18
N7X O2 C2 DOUBLE NONE 19
N7X C2 N1 SINGLE NONE 20
N7X C5 C7 SINGLE NONE 21
N7X C5 C6 DOUBLE NONE 22
N7X N1 C6 SINGLE NONE 23
N7X "C1'" N1 SINGLE BEGINDASH 24
N7X "C1'" "O4'" SINGLE NONE 25
N7X O12 C12 SINGLE NONE 26
N7X P OP3 SINGLE NONE 27
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
N7X MurckoScaffold S1 scaffold 'O=c1ncccn1[C@H]1CCCO1' InChI=1S/C8H10N2O2/c11-8-9-4-2-5-10(8)7-3-1-6-12-7/h2,4-5,7H,1,3,6H2/t7-/m1/s1 AKXKPKRAUWTVBW-SSDOTTSWSA-N
N7X pyrimidine F1 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
N7X ribose F2 fragment OCC1OCC(O)C1O InChI=1S/C5H10O4/c6-1-4-5(8)3(7)2-9-4/h3-8H,1-2H2 KZVAAIRBJJYZOW-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
N7X "C1'" S1 1
N7X C2 S1 1
N7X "C2'" S1 1
N7X "C3'" S1 1
N7X C4 S1 1
N7X "C4'" S1 1
N7X C5 S1 1
N7X C6 S1 1
N7X N1 S1 1
N7X N3 S1 1
N7X O2 S1 1
N7X "O4'" S1 1
N7X C5 F1 1
N7X C4 F1 1
N7X N3 F1 1
N7X C2 F1 1
N7X N1 F1 1
N7X C6 F1 1
N7X "C2'" F2 1
N7X "C3'" F2 1
N7X "C4'" F2 1
N7X "O4'" F2 1
N7X "C1'" F2 1
N7X "C5'" F2 1
N7X "O5'" F2 1
N7X "O3'" F2 1
N7X "O2'" F2 1
#
_pdbe_chem_comp_rdkit_properties.comp_id N7X
_pdbe_chem_comp_rdkit_properties.exactmw 411.087
_pdbe_chem_comp_rdkit_properties.amw 411.373
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 11
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 5
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 14
_pdbe_chem_comp_rdkit_properties.NumHBD 4
_pdbe_chem_comp_rdkit_properties.NumHBA 12
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 26
_pdbe_chem_comp_rdkit_properties.NumAtoms 48
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 13
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.692
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 4
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 185.363
_pdbe_chem_comp_rdkit_properties.tpsa 158.520
_pdbe_chem_comp_rdkit_properties.CrippenClogP -0.886
_pdbe_chem_comp_rdkit_properties.CrippenMR 92.872
_pdbe_chem_comp_rdkit_properties.chi0v 13.674
_pdbe_chem_comp_rdkit_properties.chi1v 8.465
_pdbe_chem_comp_rdkit_properties.chi2v 2.883
_pdbe_chem_comp_rdkit_properties.chi3v 2.883
_pdbe_chem_comp_rdkit_properties.chi4v 1.734
_pdbe_chem_comp_rdkit_properties.chi0n 33.963
_pdbe_chem_comp_rdkit_properties.chi1n 16.528
_pdbe_chem_comp_rdkit_properties.chi2n 2.345
_pdbe_chem_comp_rdkit_properties.chi3n 2.345
_pdbe_chem_comp_rdkit_properties.chi4n 1.428
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -0.950
_pdbe_chem_comp_rdkit_properties.kappa1 6.276
_pdbe_chem_comp_rdkit_properties.kappa2 8.826
_pdbe_chem_comp_rdkit_properties.kappa3 5.285
_pdbe_chem_comp_rdkit_properties.Phi 2.130
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
N7X UniChem PDBe N7X
N7X UniChem PubChem 155804461
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
N7X C 1.047 -2.219 1.926 ETKDGv3 1
N7X C1 0.264 -3.169 1.014 ETKDGv3 2
N7X "C1'" -1.099 0.636 1.448 ETKDGv3 3
N7X C12 1.652 -4.020 -0.639 ETKDGv3 4
N7X C2 -2.871 -1.055 0.808 ETKDGv3 5
N7X "C2'" 0.246 -0.071 1.472 ETKDGv3 6
N7X "C3'" 1.169 1.023 1.942 ETKDGv3 7
N7X C4 -3.520 -1.375 -1.466 ETKDGv3 8
N7X "C4'" 0.474 2.289 1.417 ETKDGv3 9
N7X C5 -2.587 -0.286 -1.879 ETKDGv3 10
N7X "C5'" 1.130 2.806 0.132 ETKDGv3 11
N7X C6 -1.868 0.360 -0.945 ETKDGv3 12
N7X C7 -2.439 0.086 -3.330 ETKDGv3 13
N7X N1 -1.987 0.021 0.450 ETKDGv3 14
N7X N3 -3.626 -1.709 -0.213 ETKDGv3 15
N7X N4 -4.309 -2.076 -2.432 ETKDGv3 16
N7X O12 1.080 -4.260 0.628 ETKDGv3 17
N7X O2 -2.983 -1.434 2.004 ETKDGv3 18
N7X "O2'" 0.213 -1.167 2.372 ETKDGv3 19
N7X "O3'" 1.226 1.049 3.346 ETKDGv3 20
N7X "O4'" -0.885 1.999 1.154 ETKDGv3 21
N7X "O5'" 2.439 3.245 0.417 ETKDGv3 22
N7X OP2 4.497 4.673 -0.754 ETKDGv3 23
N7X P 3.241 3.578 -1.053 ETKDGv3 24
N7X S 3.907 2.116 -1.697 ETKDGv3 25
N7X H1 1.383 -2.790 2.817 ETKDGv3 26
N7X H2 1.973 -1.850 1.425 ETKDGv3 27
N7X H3 -0.177 -2.617 0.150 ETKDGv3 28
N7X H4 -0.595 -3.573 1.590 ETKDGv3 29
N7X H5 -1.569 0.587 2.457 ETKDGv3 30
N7X H6 2.359 -4.842 -0.870 ETKDGv3 31
N7X H7 0.869 -4.015 -1.430 ETKDGv3 32
N7X H8 2.225 -3.066 -0.657 ETKDGv3 33
N7X H9 0.520 -0.354 0.425 ETKDGv3 34
N7X H10 2.190 0.871 1.519 ETKDGv3 35
N7X H11 0.521 3.099 2.179 ETKDGv3 36
N7X H12 0.524 3.657 -0.250 ETKDGv3 37
N7X H13 1.125 1.985 -0.623 ETKDGv3 38
N7X H14 -1.179 1.141 -1.243 ETKDGv3 39
N7X H15 -2.094 -0.798 -3.907 ETKDGv3 40
N7X H16 -1.701 0.903 -3.480 ETKDGv3 41
N7X H17 -3.416 0.429 -3.728 ETKDGv3 42
N7X H18 -4.954 -2.838 -2.126 ETKDGv3 43
N7X H19 -4.267 -1.851 -3.450 ETKDGv3 44
N7X "HO3'" 1.987 1.640 3.585 ETKDGv3 45
N7X HOP2 4.932 4.343 0.072 ETKDGv3 46
N7X OP3 2.176 4.260 -2.182 ETKDGv3 47
N7X HOP3 2.759 4.638 -2.888 ETKDGv3 48
#