data_NCQ
#
_chem_comp.id NCQ
_chem_comp.name 3,6-Bis[3-(azepan-1-yl)propionamido]acridine
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAD
_chem_comp.formula "C31 H41 N5 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms "N,N'-acridine-3,6-diylbis(3-azepan-1-ylpropanamide)"
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2008-10-13
_chem_comp.pdbx_modified_date 2021-03-13
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 515.690
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code NCQ
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 3EUM
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
NCQ O39 O39 O 0 1 N N N N N N 15.025 18.193 11.253 4.570 0.053 -0.417 O39 NCQ 1
NCQ C9 C9 C 0 1 N N N N N N 13.840 17.907 11.277 5.429 -0.712 -0.032 C9 NCQ 2
NCQ C10 C10 C 0 1 N N N N N N 12.967 18.290 12.459 6.823 -0.206 0.237 C10 NCQ 3
NCQ C13 C13 C 0 1 N N N N N N 13.766 19.053 13.508 6.886 1.295 -0.052 C13 NCQ 4
NCQ N16 N16 N 0 1 N N N N N N 12.910 19.295 14.669 8.267 1.767 0.108 N16 NCQ 5
NCQ C36 C36 C 0 1 N N N N N N 12.272 18.131 15.315 9.055 1.389 -0.983 C36 NCQ 6
NCQ C33 C33 C 0 1 N N N N N N 10.947 18.577 15.955 10.552 1.675 -0.735 C33 NCQ 7
NCQ C30 C30 C 0 1 N N N N N N 11.127 18.990 17.415 10.809 3.148 -0.925 C30 NCQ 8
NCQ C27 C27 C 0 1 N N N N N N 11.811 20.354 17.535 10.712 3.941 0.394 C27 NCQ 9
NCQ C73 C73 C 0 1 N N N N N N 13.192 20.377 16.887 9.528 3.476 1.259 C73 NCQ 10
NCQ C11 C11 C 0 1 N N N N N N 13.121 20.574 15.368 8.301 3.209 0.424 C11 NCQ 11
NCQ N7 N7 N 0 1 N N N N N N 13.227 17.210 10.320 5.136 -2.013 0.160 N7 NCQ 12
NCQ C6 C6 C 0 1 Y N N N N N 13.794 16.771 9.099 3.820 -2.460 0.020 C6 NCQ 13
NCQ C40 C40 C 0 1 Y N N N N N 12.972 16.089 8.218 3.585 -3.744 -0.491 C40 NCQ 14
NCQ C42 C42 C 0 1 Y N N N N N 13.429 15.642 6.975 2.326 -4.224 -0.647 C42 NCQ 15
NCQ C4 C4 C 0 1 Y N N N N N 15.112 17.043 8.726 2.791 -1.635 0.389 C4 NCQ 16
NCQ C3 C3 C 0 1 Y N N N N N 15.587 16.608 7.482 1.461 -2.079 0.251 C3 NCQ 17
NCQ N1 N1 N 0 1 Y N N N N N 16.868 16.873 7.122 0.444 -1.297 0.601 N1 NCQ 18
NCQ C44 C44 C 0 1 Y N N N N N 14.746 15.908 6.597 1.223 -3.421 -0.290 C44 NCQ 19
NCQ C45 C45 C 0 1 Y N N N N N 15.231 15.474 5.350 -0.087 -3.884 -0.437 C45 NCQ 20
NCQ C2 C2 C 0 1 Y N N N N N 16.551 15.776 5.003 -1.127 -3.031 -0.061 C2 NCQ 21
NCQ C87 C87 C 0 1 Y N N N N N 17.361 16.468 5.926 -0.817 -1.702 0.476 C87 NCQ 22
NCQ C47 C47 C 0 1 Y N N N N N 17.092 15.371 3.774 -2.475 -3.428 -0.179 C47 NCQ 23
NCQ C49 C49 C 0 1 Y N N N N N 18.431 15.681 3.469 -3.462 -2.575 0.195 C49 NCQ 24
NCQ C51 C51 C 0 1 Y N N N N N 19.242 16.374 4.394 -3.174 -1.300 0.701 C51 NCQ 25
NCQ C85 C85 C 0 1 Y N N N N N 18.682 16.778 5.613 -1.884 -0.861 0.848 C85 NCQ 26
NCQ N52 N52 N 0 1 N N N N N N 20.565 16.750 4.040 -4.226 -0.460 1.071 N52 NCQ 27
NCQ C54 C54 C 0 1 N N N N N N 21.522 17.296 4.804 -5.366 -0.451 0.353 C54 NCQ 28
NCQ O84 O84 O 0 1 N N N N N N 21.425 17.422 6.006 -5.512 -1.232 -0.563 O84 NCQ 29
NCQ C55 C55 C 0 1 N N N N N N 22.819 17.709 4.129 -6.459 0.531 0.687 C55 NCQ 30
NCQ C58 C58 C 0 1 N N N N N N 23.681 18.518 5.108 -7.634 0.333 -0.273 C58 NCQ 31
NCQ N61 N61 N 0 1 N N N N N N 24.444 19.630 4.515 -8.654 1.358 -0.017 N61 NCQ 32
NCQ C75 C75 C 0 1 N N N N N N 24.792 19.607 3.091 -9.988 0.897 -0.451 C75 NCQ 33
NCQ C72 C72 C 0 1 N N N N N N 24.595 21.025 2.545 -11.020 1.557 0.429 C72 NCQ 34
NCQ C69 C69 C 0 1 N N N N N N 25.759 21.971 2.868 -11.579 2.837 -0.215 C69 NCQ 35
NCQ C66 C66 C 0 1 N N N N N N 25.742 22.589 4.280 -10.476 3.668 -0.901 C66 NCQ 36
NCQ C29 C29 C 0 1 N N N N N N 25.087 21.782 5.419 -9.208 3.730 -0.087 C29 NCQ 37
NCQ C31 C31 C 0 1 N N N N N N 25.401 20.280 5.415 -8.263 2.595 -0.538 C31 NCQ 38
NCQ H10 H10 H 0 1 N N N N N N 12.145 18.928 12.103 7.080 -0.387 1.281 H10 NCQ 39
NCQ H10A H10A H 0 0 N N N N N N 12.576 17.370 12.918 7.530 -0.730 -0.407 H10A NCQ 40
NCQ H13 H13 H 0 1 N N N N N N 14.642 18.460 13.810 6.553 1.483 -1.073 H13 NCQ 41
NCQ H13A H13A H 0 0 N N N N N N 14.110 20.011 13.091 6.238 1.826 0.645 H13A NCQ 42
NCQ H36 H36 H 0 1 N N N N N N 12.075 17.353 14.563 8.922 0.322 -1.164 H36 NCQ 43
NCQ H36A H36A H 0 0 N N N N N N 12.939 17.724 16.089 8.729 1.941 -1.865 H36A NCQ 44
NCQ H33 H33 H 0 1 N N N N N N 10.557 19.438 15.392 10.815 1.387 0.283 H33 NCQ 45
NCQ H33A H33A H 0 0 N N N N N N 10.250 17.726 15.925 11.155 1.105 -1.444 H33A NCQ 46
NCQ H30 H30 H 0 1 N N N N N N 10.137 19.048 17.891 11.807 3.280 -1.343 H30 NCQ 47
NCQ H30A H30A H 0 0 N N N N N N 11.762 18.241 17.910 10.079 3.545 -1.630 H30A NCQ 48
NCQ H27 H27 H 0 1 N N N N N N 11.180 21.105 17.036 11.636 3.808 0.956 H27 NCQ 49
NCQ H27A H27A H 0 0 N N N N N N 11.940 20.571 18.606 10.587 4.999 0.163 H27A NCQ 50
NCQ H73 H73 H 0 1 N N N N N N 13.767 21.208 17.320 9.808 2.562 1.783 H73 NCQ 51
NCQ H73A H73A H 0 0 N N N N N N 13.671 19.406 17.079 9.297 4.250 1.991 H73A NCQ 52
NCQ H11 H11 H 0 1 N N N N N N 14.068 21.015 15.023 8.350 3.787 -0.499 H11 NCQ 53
NCQ H11A H11A H 0 0 N N N N N N 12.272 21.236 15.143 7.407 3.484 0.984 H11A NCQ 54
NCQ HN7 HN7 H 0 1 N N N N N N 12.269 16.973 10.481 5.838 -2.639 0.396 HN7 NCQ 55
NCQ H40 H40 H 0 1 N N N N N N 11.947 15.897 8.500 4.425 -4.365 -0.766 H40 NCQ 56
NCQ H42 H42 H 0 1 N N N N N N 12.771 15.097 6.315 2.169 -5.217 -1.043 H42 NCQ 57
NCQ H4 H4 H 0 1 N N N N N N 15.763 17.587 9.394 2.997 -0.652 0.784 H4 NCQ 58
NCQ H45 H45 H 0 1 N N N N N N 14.597 14.919 4.675 -0.288 -4.870 -0.828 H45 NCQ 59
NCQ H47 H47 H 0 1 N N N N N N 16.486 14.825 3.066 -2.722 -4.405 -0.567 H47 NCQ 60
NCQ H49 H49 H 0 1 N N N N N N 18.843 15.385 2.516 -4.492 -2.885 0.101 H49 NCQ 61
NCQ H85 H85 H 0 1 N N N N N N 19.281 17.336 6.317 -1.687 0.126 1.239 H85 NCQ 62
NCQ HN52 HN52 H 0 0 N N N N N N 20.818 16.584 3.087 -4.136 0.116 1.846 HN52 NCQ 63
NCQ H55 H55 H 0 1 N N N N N N 23.370 16.810 3.816 -6.795 0.367 1.711 H55 NCQ 64
NCQ H55A H55A H 0 0 N N N N N N 22.589 18.329 3.250 -6.077 1.547 0.588 H55A NCQ 65
NCQ H58 H58 H 0 1 N N N N N N 23.008 18.946 5.865 -7.282 0.419 -1.301 H58 NCQ 66
NCQ H58A H58A H 0 0 N N N N N N 24.427 17.816 5.509 -8.066 -0.656 -0.119 H58A NCQ 67
NCQ H75 H75 H 0 1 N N N N N N 25.839 19.294 2.962 -10.155 1.180 -1.490 H75 NCQ 68
NCQ H75A H75A H 0 0 N N N N N N 24.155 18.893 2.549 -10.054 -0.186 -0.350 H75A NCQ 69
NCQ H72 H72 H 0 1 N N N N N N 24.499 20.961 1.451 -11.838 0.859 0.602 H72 NCQ 70
NCQ H72A H72A H 0 0 N N N N N N 23.696 21.438 3.026 -10.562 1.811 1.385 H72A NCQ 71
NCQ H69 H69 H 0 1 N N N N N N 26.691 21.394 2.771 -12.328 2.562 -0.957 H69 NCQ 72
NCQ H69A H69A H 0 0 N N N N N N 25.671 22.813 2.166 -12.053 3.444 0.556 H69A NCQ 73
NCQ H66 H66 H 0 1 N N N N N N 26.792 22.747 4.568 -10.251 3.223 -1.870 H66 NCQ 74
NCQ H66A H66A H 0 0 N N N N N N 25.118 23.490 4.182 -10.844 4.681 -1.057 H66A NCQ 75
NCQ H29 H29 H 0 1 N N N N N N 25.449 22.196 6.372 -8.721 4.693 -0.244 H29 NCQ 76
NCQ H29A H29A H 0 0 N N N N N N 24.000 21.872 5.277 -9.446 3.610 0.969 H29A NCQ 77
NCQ H31 H31 H 0 1 N N N N N N 25.303 19.870 6.431 -7.252 2.819 -0.201 H31 NCQ 78
NCQ H31A H31A H 0 0 N N N N N N 26.432 20.103 5.075 -8.269 2.539 -1.627 H31A NCQ 79
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
NCQ O39 C9 DOUB N N 1
NCQ N7 C9 SING N N 2
NCQ C9 C10 SING N N 3
NCQ C10 C13 SING N N 4
NCQ C10 H10 SING N N 5
NCQ C10 H10A SING N N 6
NCQ C13 N16 SING N N 7
NCQ C13 H13 SING N N 8
NCQ C13 H13A SING N N 9
NCQ N16 C36 SING N N 10
NCQ N16 C11 SING N N 11
NCQ C36 C33 SING N N 12
NCQ C36 H36 SING N N 13
NCQ C36 H36A SING N N 14
NCQ C33 C30 SING N N 15
NCQ C33 H33 SING N N 16
NCQ C33 H33A SING N N 17
NCQ C30 C27 SING N N 18
NCQ C30 H30 SING N N 19
NCQ C30 H30A SING N N 20
NCQ C73 C27 SING N N 21
NCQ C27 H27 SING N N 22
NCQ C27 H27A SING N N 23
NCQ C11 C73 SING N N 24
NCQ C73 H73 SING N N 25
NCQ C73 H73A SING N N 26
NCQ C11 H11 SING N N 27
NCQ C11 H11A SING N N 28
NCQ C6 N7 SING N N 29
NCQ N7 HN7 SING N N 30
NCQ C40 C6 DOUB Y N 31
NCQ C4 C6 SING Y N 32
NCQ C42 C40 SING Y N 33
NCQ C40 H40 SING N N 34
NCQ C44 C42 DOUB Y N 35
NCQ C42 H42 SING N N 36
NCQ C3 C4 DOUB Y N 37
NCQ C4 H4 SING N N 38
NCQ C44 C3 SING Y N 39
NCQ N1 C3 SING Y N 40
NCQ C87 N1 DOUB Y N 41
NCQ C45 C44 SING Y N 42
NCQ C2 C45 DOUB Y N 43
NCQ C45 H45 SING N N 44
NCQ C47 C2 SING Y N 45
NCQ C2 C87 SING Y N 46
NCQ C85 C87 SING Y N 47
NCQ C49 C47 DOUB Y N 48
NCQ C47 H47 SING N N 49
NCQ C49 C51 SING Y N 50
NCQ C49 H49 SING N N 51
NCQ N52 C51 SING N N 52
NCQ C51 C85 DOUB Y N 53
NCQ C85 H85 SING N N 54
NCQ N52 C54 SING N N 55
NCQ N52 HN52 SING N N 56
NCQ C55 C54 SING N N 57
NCQ C54 O84 DOUB N N 58
NCQ C55 C58 SING N N 59
NCQ C55 H55 SING N N 60
NCQ C55 H55A SING N N 61
NCQ N61 C58 SING N N 62
NCQ C58 H58 SING N N 63
NCQ C58 H58A SING N N 64
NCQ C75 N61 SING N N 65
NCQ N61 C31 SING N N 66
NCQ C72 C75 SING N N 67
NCQ C75 H75 SING N N 68
NCQ C75 H75A SING N N 69
NCQ C72 C69 SING N N 70
NCQ C72 H72 SING N N 71
NCQ C72 H72A SING N N 72
NCQ C69 C66 SING N N 73
NCQ C69 H69 SING N N 74
NCQ C69 H69A SING N N 75
NCQ C66 C29 SING N N 76
NCQ C66 H66 SING N N 77
NCQ C66 H66A SING N N 78
NCQ C31 C29 SING N N 79
NCQ C29 H29 SING N N 80
NCQ C29 H29A SING N N 81
NCQ C31 H31 SING N N 82
NCQ C31 H31A SING N N 83
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
NCQ SMILES ACDLabs 10.04 O=C(Nc3cc2nc1cc(ccc1cc2cc3)NC(=O)CCN4CCCCCC4)CCN5CCCCCC5
NCQ SMILES_CANONICAL CACTVS 3.341 O=C(CCN1CCCCCC1)Nc2ccc3cc4ccc(NC(=O)CCN5CCCCCC5)cc4nc3c2
NCQ SMILES CACTVS 3.341 O=C(CCN1CCCCCC1)Nc2ccc3cc4ccc(NC(=O)CCN5CCCCCC5)cc4nc3c2
NCQ SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 c1cc(cc2c1cc3ccc(cc3n2)NC(=O)CCN4CCCCCC4)NC(=O)CCN5CCCCCC5
NCQ SMILES "OpenEye OEToolkits" 1.5.0 c1cc(cc2c1cc3ccc(cc3n2)NC(=O)CCN4CCCCCC4)NC(=O)CCN5CCCCCC5
NCQ InChI InChI 1.03 InChI=1S/C31H41N5O2/c37-30(13-19-35-15-5-1-2-6-16-35)32-26-11-9-24-21-25-10-12-27(23-29(25)34-28(24)22-26)33-31(38)14-20-36-17-7-3-4-8-18-36/h9-12,21-23H,1-8,13-20H2,(H,32,37)(H,33,38)
NCQ InChIKey InChI 1.03 MSWYQCALXGGGBX-UHFFFAOYSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
NCQ "SYSTEMATIC NAME" ACDLabs 10.04 "N,N'-acridine-3,6-diylbis(3-azepan-1-ylpropanamide)"
NCQ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 3-(azepan-1-yl)-N-[6-[3-(azepan-1-yl)propanoylamino]acridin-3-yl]propanamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
NCQ 'Create component' 2008-10-13 RCSB
NCQ 'Modify aromatic_flag' 2011-06-04 RCSB
NCQ 'Modify descriptor' 2011-06-04 RCSB
NCQ 'Modify synonyms' 2021-03-13 RCSB
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id NCQ
_pdbx_chem_comp_synonyms.name "N,N'-acridine-3,6-diylbis(3-azepan-1-ylpropanamide)"
_pdbx_chem_comp_synonyms.provenance PDB
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_synonyms.comp_id NCQ
_pdbe_chem_comp_synonyms.name "N,N'-acridine-3,6-diylbis(3-azepan-1-ylpropanamide)"
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
NCQ O39 O 23.311 -1.971 1
NCQ C9 C 23.305 -0.471 2
NCQ C10 C 24.601 0.284 3
NCQ C13 C 25.903 -0.461 4
NCQ N16 N 27.200 0.294 5
NCQ C36 C 28.442 -0.546 6
NCQ C33 C 29.874 -0.098 7
NCQ C30 C 30.416 1.300 8
NCQ C27 C 29.661 2.596 9
NCQ C73 C 28.177 2.814 10
NCQ C11 C 27.082 1.790 11
NCQ N7 N 22.003 0.274 12
NCQ C6 C 20.707 -0.481 13
NCQ C40 C 20.707 -2.043 14
NCQ C42 C 19.348 -2.814 15
NCQ C4 C 19.348 0.290 16
NCQ C3 C 18.007 -0.512 17
NCQ N1 N 16.708 0.238 18
NCQ C44 C 18.007 -2.012 19
NCQ C45 C 16.708 -2.762 20
NCQ C2 C 15.409 -2.012 21
NCQ C87 C 15.409 -0.512 22
NCQ C47 C 14.068 -2.814 23
NCQ C49 C 12.709 -2.043 24
NCQ C51 C 12.709 -0.481 25
NCQ C85 C 14.068 0.290 26
NCQ N52 N 11.413 0.274 27
NCQ C54 C 10.111 -0.471 28
NCQ O84 O 10.105 -1.971 29
NCQ C55 C 8.815 0.284 30
NCQ C58 C 7.513 -0.461 31
NCQ N61 N 6.217 0.294 32
NCQ C75 C 6.335 1.790 33
NCQ C72 C 5.239 2.814 34
NCQ C69 C 3.755 2.596 35
NCQ C66 C 3.000 1.300 36
NCQ C29 C 3.542 -0.098 37
NCQ C31 C 4.974 -0.546 38
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
NCQ O39 C9 DOUBLE NONE 1
NCQ N7 C9 SINGLE NONE 2
NCQ C9 C10 SINGLE NONE 3
NCQ C10 C13 SINGLE NONE 4
NCQ C13 N16 SINGLE NONE 5
NCQ N16 C36 SINGLE NONE 6
NCQ N16 C11 SINGLE NONE 7
NCQ C36 C33 SINGLE NONE 8
NCQ C33 C30 SINGLE NONE 9
NCQ C30 C27 SINGLE NONE 10
NCQ C73 C27 SINGLE NONE 11
NCQ C11 C73 SINGLE NONE 12
NCQ C6 N7 SINGLE NONE 13
NCQ C40 C6 DOUBLE NONE 14
NCQ C4 C6 SINGLE NONE 15
NCQ C42 C40 SINGLE NONE 16
NCQ C44 C42 DOUBLE NONE 17
NCQ C3 C4 DOUBLE NONE 18
NCQ C44 C3 SINGLE NONE 19
NCQ N1 C3 SINGLE NONE 20
NCQ C87 N1 DOUBLE NONE 21
NCQ C45 C44 SINGLE NONE 22
NCQ C2 C45 DOUBLE NONE 23
NCQ C47 C2 SINGLE NONE 24
NCQ C2 C87 SINGLE NONE 25
NCQ C85 C87 SINGLE NONE 26
NCQ C49 C47 DOUBLE NONE 27
NCQ C49 C51 SINGLE NONE 28
NCQ N52 C51 SINGLE NONE 29
NCQ C51 C85 DOUBLE NONE 30
NCQ N52 C54 SINGLE NONE 31
NCQ C55 C54 SINGLE NONE 32
NCQ C54 O84 DOUBLE NONE 33
NCQ C55 C58 SINGLE NONE 34
NCQ N61 C58 SINGLE NONE 35
NCQ C75 N61 SINGLE NONE 36
NCQ N61 C31 SINGLE NONE 37
NCQ C72 C75 SINGLE NONE 38
NCQ C72 C69 SINGLE NONE 39
NCQ C69 C66 SINGLE NONE 40
NCQ C66 C29 SINGLE NONE 41
NCQ C31 C29 SINGLE NONE 42
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
NCQ MurckoScaffold S1 scaffold O=C(CCN1CCCCCC1)Nc1ccc2cc3ccc(NC(=O)CCN4CCCCCC4)cc3nc2c1 InChI=1S/C31H41N5O2/c37-30(13-19-35-15-5-1-2-6-16-35)32-26-11-9-24-21-25-10-12-27(23-29(25)34-28(24)22-26)33-31(38)14-20-36-17-7-3-4-8-18-36/h9-12,21-23H,1-8,13-20H2,(H,32,37)(H,33,38) MSWYQCALXGGGBX-UHFFFAOYSA-N
NCQ acridine F1 fragment c1ccc2nc3ccccc3cc2c1 InChI=1S/C13H9N/c1-3-7-12-10(5-1)9-11-6-2-4-8-13(11)14-12/h1-9H DZBUGLKDJFMEHC-UHFFFAOYSA-N
NCQ amide F2 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
NCQ phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
NCQ pyridine F4 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
NCQ quinoline F5 fragment c1ccc2ncccc2c1 InChI=1S/C9H7N/c1-2-6-9-8(4-1)5-3-7-10-9/h1-7H SMWDFEZZVXVKRB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
NCQ O39 S1 1
NCQ C9 S1 1
NCQ C10 S1 1
NCQ C13 S1 1
NCQ N16 S1 1
NCQ C36 S1 1
NCQ C33 S1 1
NCQ C30 S1 1
NCQ C27 S1 1
NCQ C73 S1 1
NCQ C11 S1 1
NCQ N7 S1 1
NCQ C6 S1 1
NCQ C40 S1 1
NCQ C42 S1 1
NCQ C4 S1 1
NCQ C3 S1 1
NCQ N1 S1 1
NCQ C44 S1 1
NCQ C45 S1 1
NCQ C2 S1 1
NCQ C87 S1 1
NCQ C47 S1 1
NCQ C49 S1 1
NCQ C51 S1 1
NCQ C85 S1 1
NCQ N52 S1 1
NCQ C54 S1 1
NCQ O84 S1 1
NCQ C55 S1 1
NCQ C58 S1 1
NCQ N61 S1 1
NCQ C75 S1 1
NCQ C72 S1 1
NCQ C69 S1 1
NCQ C66 S1 1
NCQ C29 S1 1
NCQ C31 S1 1
NCQ C6 F1 1
NCQ C40 F1 1
NCQ C42 F1 1
NCQ C44 F1 1
NCQ C3 F1 1
NCQ C4 F1 1
NCQ N1 F1 1
NCQ C87 F1 1
NCQ C2 F1 1
NCQ C45 F1 1
NCQ C47 F1 1
NCQ C49 F1 1
NCQ C51 F1 1
NCQ C85 F1 1
NCQ N7 F2 1
NCQ C9 F2 1
NCQ O39 F2 1
NCQ C10 F2 1
NCQ N52 F2 2
NCQ C54 F2 2
NCQ O84 F2 2
NCQ C55 F2 2
NCQ C6 F3 1
NCQ C40 F3 1
NCQ C42 F3 1
NCQ C44 F3 1
NCQ C3 F3 1
NCQ C4 F3 1
NCQ C2 F3 2
NCQ C47 F3 2
NCQ C49 F3 2
NCQ C51 F3 2
NCQ C85 F3 2
NCQ C87 F3 2
NCQ C3 F4 1
NCQ C44 F4 1
NCQ C45 F4 1
NCQ C2 F4 1
NCQ C87 F4 1
NCQ N1 F4 1
NCQ C40 F5 1
NCQ C42 F5 1
NCQ C44 F5 1
NCQ C3 F5 1
NCQ C4 F5 1
NCQ C6 F5 1
NCQ N1 F5 1
NCQ C87 F5 1
NCQ C2 F5 1
NCQ C45 F5 1
NCQ C49 F5 2
NCQ C47 F5 2
NCQ C2 F5 2
NCQ C87 F5 2
NCQ C85 F5 2
NCQ C51 F5 2
NCQ N1 F5 2
NCQ C3 F5 2
NCQ C44 F5 2
NCQ C45 F5 2
#
_pdbe_chem_comp_rdkit_properties.comp_id NCQ
_pdbe_chem_comp_rdkit_properties.exactmw 515.326
_pdbe_chem_comp_rdkit_properties.amw 515.702
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 7
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 8
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 38
_pdbe_chem_comp_rdkit_properties.NumAtoms 79
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 7
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.516
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 2
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 283.234
_pdbe_chem_comp_rdkit_properties.tpsa 77.570
_pdbe_chem_comp_rdkit_properties.CrippenClogP 4.179
_pdbe_chem_comp_rdkit_properties.CrippenMR 149.498
_pdbe_chem_comp_rdkit_properties.chi0v 18.553
_pdbe_chem_comp_rdkit_properties.chi1v 10.092
_pdbe_chem_comp_rdkit_properties.chi2v 4.054
_pdbe_chem_comp_rdkit_properties.chi3v 4.054
_pdbe_chem_comp_rdkit_properties.chi4v 2.565
_pdbe_chem_comp_rdkit_properties.chi0n 59.553
_pdbe_chem_comp_rdkit_properties.chi1n 30.486
_pdbe_chem_comp_rdkit_properties.chi2n 4.054
_pdbe_chem_comp_rdkit_properties.chi3n 4.054
_pdbe_chem_comp_rdkit_properties.chi4n 2.565
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.030
_pdbe_chem_comp_rdkit_properties.kappa1 6.310
_pdbe_chem_comp_rdkit_properties.kappa2 13.161
_pdbe_chem_comp_rdkit_properties.kappa3 7.514
_pdbe_chem_comp_rdkit_properties.Phi 2.185
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
NCQ UniChem ChEMBL CHEMBL82008
NCQ UniChem PDBe NCQ
NCQ UniChem ZINC ZINC000013557558
NCQ UniChem 'PubChem TPHARMA' 15456380
NCQ UniChem Nikkaji J1.173.860E
NCQ UniChem BindingDb 50080840
NCQ UniChem PubChem 10436567
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
NCQ O39 -3.545 -0.535 1.049 ETKDGv3 1
NCQ C9 -4.419 -0.334 0.163 ETKDGv3 2
NCQ C10 -5.819 -0.818 0.390 ETKDGv3 3
NCQ C13 -6.665 0.274 1.054 ETKDGv3 4
NCQ N16 -8.044 -0.218 1.277 ETKDGv3 5
NCQ C36 -8.582 0.278 2.563 ETKDGv3 6
NCQ C33 -10.022 -0.192 2.846 ETKDGv3 7
NCQ C30 -11.122 0.402 1.935 ETKDGv3 8
NCQ C27 -10.700 1.644 1.133 ETKDGv3 9
NCQ C73 -9.604 1.401 0.065 ETKDGv3 10
NCQ C11 -8.915 0.017 0.098 ETKDGv3 11
NCQ N7 -4.107 0.429 -1.013 ETKDGv3 12
NCQ C6 -2.771 0.780 -1.411 ETKDGv3 13
NCQ C40 -2.558 1.928 -2.080 ETKDGv3 14
NCQ C42 -1.196 2.308 -2.511 ETKDGv3 15
NCQ C4 -1.623 -0.131 -1.149 ETKDGv3 16
NCQ C3 -0.390 0.213 -1.544 ETKDGv3 17
NCQ N1 0.728 -0.651 -1.304 ETKDGv3 18
NCQ C44 -0.164 1.493 -2.252 ETKDGv3 19
NCQ C45 1.215 1.815 -2.659 ETKDGv3 20
NCQ C2 2.206 0.950 -2.391 ETKDGv3 21
NCQ C87 1.931 -0.330 -1.685 ETKDGv3 22
NCQ C47 3.598 1.241 -2.775 ETKDGv3 23
NCQ C49 4.574 0.364 -2.507 ETKDGv3 24
NCQ C51 4.304 -0.935 -1.823 ETKDGv3 25
NCQ C85 3.057 -1.241 -1.422 ETKDGv3 26
NCQ N52 5.374 -1.848 -1.517 ETKDGv3 27
NCQ C54 6.587 -1.966 -2.278 ETKDGv3 28
NCQ O84 6.667 -1.485 -3.440 ETKDGv3 29
NCQ C55 7.770 -2.683 -1.697 ETKDGv3 30
NCQ C58 8.781 -1.713 -1.076 ETKDGv3 31
NCQ N61 8.200 -1.051 0.118 ETKDGv3 32
NCQ C75 7.802 0.349 -0.162 ETKDGv3 33
NCQ C72 6.645 0.821 0.754 ETKDGv3 34
NCQ C69 6.158 -0.241 1.758 ETKDGv3 35
NCQ C66 7.168 -0.571 2.880 ETKDGv3 36
NCQ C29 8.649 -0.369 2.518 ETKDGv3 37
NCQ C31 9.114 -1.158 1.279 ETKDGv3 38
NCQ H10 -6.261 -1.115 -0.584 ETKDGv3 39
NCQ H10A -5.800 -1.718 1.042 ETKDGv3 40
NCQ H13 -6.169 0.538 2.017 ETKDGv3 41
NCQ H13A -6.662 1.195 0.429 ETKDGv3 42
NCQ H36 -8.499 1.384 2.634 ETKDGv3 43
NCQ H36A -7.951 -0.129 3.385 ETKDGv3 44
NCQ H33 -10.259 0.080 3.899 ETKDGv3 45
NCQ H33A -10.059 -1.302 2.789 ETKDGv3 46
NCQ H30 -11.990 0.684 2.572 ETKDGv3 47
NCQ H30A -11.506 -0.376 1.241 ETKDGv3 48
NCQ H27 -11.604 2.046 0.624 ETKDGv3 49
NCQ H27A -10.373 2.440 1.836 ETKDGv3 50
NCQ H73 -8.834 2.198 0.143 ETKDGv3 51
NCQ H73A -10.068 1.515 -0.939 ETKDGv3 52
NCQ H11 -8.328 -0.087 -0.841 ETKDGv3 53
NCQ H11A -9.665 -0.797 0.031 ETKDGv3 54
NCQ HN7 -4.906 0.810 -1.570 ETKDGv3 55
NCQ H40 -3.382 2.596 -2.298 ETKDGv3 56
NCQ H42 -1.045 3.244 -3.035 ETKDGv3 57
NCQ H4 -1.779 -1.086 -0.665 ETKDGv3 58
NCQ H45 1.423 2.746 -3.174 ETKDGv3 59
NCQ H47 3.844 2.175 -3.266 ETKDGv3 60
NCQ H49 5.585 0.635 -2.773 ETKDGv3 61
NCQ H85 2.866 -2.174 -0.905 ETKDGv3 62
NCQ HN52 5.243 -2.510 -0.718 ETKDGv3 63
NCQ H55 8.272 -3.260 -2.505 ETKDGv3 64
NCQ H55A 7.437 -3.413 -0.928 ETKDGv3 65
NCQ H58 9.680 -2.317 -0.814 ETKDGv3 66
NCQ H58A 9.127 -0.979 -1.839 ETKDGv3 67
NCQ H75 8.676 1.032 -0.061 ETKDGv3 68
NCQ H75A 7.454 0.456 -1.213 ETKDGv3 69
NCQ H72 5.780 1.111 0.119 ETKDGv3 70
NCQ H72A 6.949 1.738 1.305 ETKDGv3 71
NCQ H69 5.890 -1.171 1.215 ETKDGv3 72
NCQ H69A 5.218 0.122 2.228 ETKDGv3 73
NCQ H66 6.945 0.077 3.756 ETKDGv3 74
NCQ H66A 7.013 -1.622 3.207 ETKDGv3 75
NCQ H29 9.267 -0.688 3.385 ETKDGv3 76
NCQ H29A 8.859 0.713 2.378 ETKDGv3 77
NCQ H31 9.198 -2.229 1.569 ETKDGv3 78
NCQ H31A 10.132 -0.800 1.003 ETKDGv3 79
#