data_NL7
#
_chem_comp.id NL7
_chem_comp.name '4-[(5-methoxypyridin-3-yl)sulfamoyl]benzene-1-sulfonic acid'
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula 'C12 H12 N2 O6 S2'
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2019-05-20
_chem_comp.pdbx_modified_date 2024-09-27
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 344.363
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code NL7
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6P0I
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
_chem_comp.pdbx_pcm Y
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
NL7 C13 C1 C 0 1 Y N N N N N 25.117 1.093 10.108 -0.617 -0.683 1.047 C13 NL7 1
NL7 C15 C2 C 0 1 Y N N N N N 26.360 -0.710 11.113 -2.675 0.036 0.056 C15 NL7 2
NL7 C20 C3 C 0 1 Y N N N N N 26.616 -1.136 9.803 -2.453 -0.808 -1.017 C20 NL7 3
NL7 C21 C4 C 0 1 Y N N N N N 26.138 -0.464 8.682 -1.319 -1.599 -1.051 C21 NL7 4
NL7 C22 C5 C 0 1 Y N N N N N 21.800 0.984 8.428 2.864 0.678 -1.042 C22 NL7 5
NL7 C01 C6 C 0 1 N N N N N N 18.660 1.355 10.251 3.994 4.114 -0.419 C01 NL7 6
NL7 C03 C7 C 0 1 Y N N N N N 20.478 0.921 8.814 3.339 1.828 -0.421 C03 NL7 7
NL7 C04 C8 C 0 1 Y N N N N N 19.602 0.450 7.804 3.645 1.788 0.932 C04 NL7 8
NL7 C06 C9 C 0 1 Y N N N N N 21.296 0.146 6.301 3.033 -0.429 1.078 C06 NL7 9
NL7 C07 C10 C 0 1 Y N N N N N 22.259 0.600 7.168 2.709 -0.471 -0.273 C07 NL7 10
NL7 C12 C11 C 0 1 Y N N N N N 25.364 0.686 8.824 -0.399 -1.532 -0.022 C12 NL7 11
NL7 C14 C12 C 0 1 Y N N N N N 25.600 0.444 11.208 -1.757 0.099 1.087 C14 NL7 12
NL7 N05 N1 N 0 1 Y N N N N N 20.022 0.061 6.588 3.491 0.678 1.627 N05 NL7 13
NL7 N08 N2 N 0 1 N N N N N N 23.592 0.665 6.760 2.224 -1.648 -0.849 N08 NL7 14
NL7 O02 O1 O 0 1 N N N N N N 20.041 1.304 10.017 3.501 2.976 -1.130 O02 NL7 15
NL7 O10 O2 O 0 1 N N N N N N 24.166 2.775 7.988 1.488 -2.674 1.272 O10 NL7 16
NL7 O11 O3 O 0 1 N N N N N N 25.782 1.755 6.549 0.755 -3.630 -0.918 O11 NL7 17
NL7 O17 O4 O 0 1 N N N N N N 26.864 -0.581 13.618 -5.086 0.386 -0.720 O17 NL7 18
NL7 O18 O5 O 0 1 N N N N N N 28.115 -2.174 12.408 -4.359 1.333 1.476 O18 NL7 19
NL7 S09 S1 S 0 1 N N N N N N 24.709 1.571 7.472 1.054 -2.527 -0.073 S09 NL7 20
NL7 S16 S2 S 0 1 N N N N N N 26.900 -1.512 12.571 -4.128 1.031 0.107 S16 NL7 21
NL7 H131 H1 H 0 0 N N N N N N 24.509 1.973 10.258 0.100 -0.634 1.853 H131 NL7 22
NL7 H201 H2 H 0 0 N N N N N N 27.211 -2.026 9.657 -3.170 -0.857 -1.823 H201 NL7 23
NL7 H211 H3 H 0 0 N N N N N N 26.369 -0.836 7.695 -1.148 -2.262 -1.886 H211 NL7 24
NL7 H221 H4 H 0 0 N N N N N N 22.522 1.352 9.142 2.617 0.679 -2.093 H221 NL7 25
NL7 H012 H5 H 0 0 N N N N N N 18.474 1.687 11.283 4.975 3.885 -0.002 H012 NL7 26
NL7 H013 H6 H 0 0 N N N N N N 18.195 2.063 9.549 4.077 4.960 -1.100 H013 NL7 27
NL7 H011 H7 H 0 0 N N N N N N 18.226 0.355 10.104 3.306 4.363 0.389 H011 NL7 28
NL7 H041 H8 H 0 0 N N N N N N 18.545 0.401 8.022 4.015 2.677 1.421 H041 NL7 29
NL7 H061 H9 H 0 0 N N N N N N 21.611 -0.162 5.315 2.921 -1.317 1.681 H061 NL7 30
NL7 H141 H10 H 0 0 N N N N N N 25.382 0.845 12.187 -1.930 0.758 1.925 H141 NL7 31
NL7 H081 H11 H 0 0 N N N N N N 23.935 -0.273 6.806 2.572 -1.950 -1.702 H081 NL7 32
NL7 O1 O6 O 0 1 N N N N N N 25.767 -2.457 12.516 -3.793 2.352 -0.573 O1 NL7 33
NL7 H1 H12 H 0 1 N N N N N N 26.095 -3.338 12.379 -4.530 2.978 -0.599 H1 NL7 34
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
NL7 C06 N05 DOUB Y N 1
NL7 C06 C07 SING Y N 2
NL7 O11 S09 DOUB N N 3
NL7 N05 C04 SING Y N 4
NL7 N08 C07 SING N N 5
NL7 N08 S09 SING N N 6
NL7 C07 C22 DOUB Y N 7
NL7 S09 O10 DOUB N N 8
NL7 S09 C12 SING N N 9
NL7 C04 C03 DOUB Y N 10
NL7 C22 C03 SING Y N 11
NL7 C21 C12 DOUB Y N 12
NL7 C21 C20 SING Y N 13
NL7 C03 O02 SING N N 14
NL7 C12 C13 SING Y N 15
NL7 C20 C15 DOUB Y N 16
NL7 O02 C01 SING N N 17
NL7 C13 C14 DOUB Y N 18
NL7 C15 C14 SING Y N 19
NL7 C15 S16 SING N N 20
NL7 O18 S16 DOUB N N 21
NL7 S16 O17 DOUB N N 22
NL7 C13 H131 SING N N 23
NL7 C20 H201 SING N N 24
NL7 C21 H211 SING N N 25
NL7 C22 H221 SING N N 26
NL7 C01 H012 SING N N 27
NL7 C01 H013 SING N N 28
NL7 C01 H011 SING N N 29
NL7 C04 H041 SING N N 30
NL7 C06 H061 SING N N 31
NL7 C14 H141 SING N N 32
NL7 N08 H081 SING N N 33
NL7 S16 O1 SING N N 34
NL7 O1 H1 SING N N 35
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
NL7 SMILES ACDLabs 12.01 'c1cc(S(=O)(=O)O)ccc1S(Nc2cc(OC)cnc2)(=O)=O'
NL7 InChI InChI 1.03 'InChI=1S/C12H12N2O6S2/c1-20-10-6-9(7-13-8-10)14-21(15,16)11-2-4-12(5-3-11)22(17,18)19/h2-8,14H,1H3,(H,17,18,19)'
NL7 InChIKey InChI 1.03 PNZGKLKJTVFOSH-UHFFFAOYSA-N
NL7 SMILES_CANONICAL CACTVS 3.385 'COc1cncc(N[S](=O)(=O)c2ccc(cc2)[S](O)(=O)=O)c1'
NL7 SMILES CACTVS 3.385 'COc1cncc(N[S](=O)(=O)c2ccc(cc2)[S](O)(=O)=O)c1'
NL7 SMILES_CANONICAL 'OpenEye OEToolkits' 2.0.7 'COc1cc(cnc1)NS(=O)(=O)c2ccc(cc2)S(=O)(=O)O'
NL7 SMILES 'OpenEye OEToolkits' 2.0.7 'COc1cc(cnc1)NS(=O)(=O)c2ccc(cc2)S(=O)(=O)O'
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
NL7 'SYSTEMATIC NAME' ACDLabs 12.01 '4-[(5-methoxypyridin-3-yl)sulfamoyl]benzene-1-sulfonic acid'
NL7 'SYSTEMATIC NAME' 'OpenEye OEToolkits' 2.0.7 '4-[(5-methoxypyridin-3-yl)sulfamoyl]benzenesulfonic acid'
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
NL7 'Create component' 2019-05-20 RCSB
NL7 'Modify leaving atom flag' 2019-05-20 RCSB
NL7 'Initial release' 2020-03-04 RCSB
NL7 'Modify PCM' 2024-09-27 PDBE
#
_pdbx_chem_comp_pcm.pcm_id 1
_pdbx_chem_comp_pcm.comp_id NL7
_pdbx_chem_comp_pcm.modified_residue_id TYR
_pdbx_chem_comp_pcm.type None
_pdbx_chem_comp_pcm.category 'Covalent chemical modification'
_pdbx_chem_comp_pcm.position 'Amino-acid side chain'
_pdbx_chem_comp_pcm.polypeptide_position 'Any position'
_pdbx_chem_comp_pcm.comp_id_linking_atom S16
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom OH
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ?
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ?
_pdbx_chem_comp_pcm.first_instance_model_db_code 6P0I
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
NL7 C13 C 3.201 -0.517 1
NL7 C15 C 4.500 -2.768 2
NL7 C20 C 5.799 -2.018 3
NL7 C21 C 5.799 -0.517 4
NL7 C22 C 7.098 3.232 5
NL7 C01 C 10.995 3.982 6
NL7 C03 C 8.397 3.982 7
NL7 C04 C 8.397 5.482 8
NL7 C06 C 5.799 5.482 9
NL7 C07 C 5.799 3.982 10
NL7 C12 C 4.500 0.233 11
NL7 C14 C 3.201 -2.018 12
NL7 N05 N 7.098 6.232 13
NL7 N08 N 4.500 3.232 14
NL7 O02 O 9.696 3.232 15
NL7 O10 O 3.000 1.732 16
NL7 O11 O 6.000 1.732 17
NL7 O17 O 3.000 -4.268 18
NL7 O18 O 4.500 -5.768 19
NL7 S09 S 4.500 1.732 20
NL7 S16 S 4.500 -4.268 21
NL7 O1 O 6.000 -4.268 22
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
NL7 C06 N05 DOUBLE NONE 1
NL7 C06 C07 SINGLE NONE 2
NL7 O11 S09 DOUBLE NONE 3
NL7 N05 C04 SINGLE NONE 4
NL7 N08 C07 SINGLE NONE 5
NL7 N08 S09 SINGLE NONE 6
NL7 C07 C22 DOUBLE NONE 7
NL7 S09 O10 DOUBLE NONE 8
NL7 S09 C12 SINGLE NONE 9
NL7 C04 C03 DOUBLE NONE 10
NL7 C22 C03 SINGLE NONE 11
NL7 C21 C12 SINGLE NONE 12
NL7 C21 C20 DOUBLE NONE 13
NL7 C03 O02 SINGLE NONE 14
NL7 C12 C13 DOUBLE NONE 15
NL7 C20 C15 SINGLE NONE 16
NL7 O02 C01 SINGLE NONE 17
NL7 C13 C14 SINGLE NONE 18
NL7 C15 C14 DOUBLE NONE 19
NL7 C15 S16 SINGLE NONE 20
NL7 O18 S16 DOUBLE NONE 21
NL7 S16 O17 DOUBLE NONE 22
NL7 S16 O1 SINGLE NONE 23
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
NL7 MurckoScaffold S1 scaffold O=S(=O)(Nc1cccnc1)c1ccccc1 InChI=1S/C11H10N2O2S/c14-16(15,11-6-2-1-3-7-11)13-10-5-4-8-12-9-10/h1-9,13H UFVHQLOWDFKPIU-UHFFFAOYSA-N
NL7 phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
NL7 pyridine F2 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
NL7 C13 S1 1
NL7 C15 S1 1
NL7 C20 S1 1
NL7 C21 S1 1
NL7 C22 S1 1
NL7 C03 S1 1
NL7 C04 S1 1
NL7 C06 S1 1
NL7 C07 S1 1
NL7 C12 S1 1
NL7 C14 S1 1
NL7 N05 S1 1
NL7 N08 S1 1
NL7 O10 S1 1
NL7 O11 S1 1
NL7 S09 S1 1
NL7 C13 F1 1
NL7 C12 F1 1
NL7 C21 F1 1
NL7 C20 F1 1
NL7 C15 F1 1
NL7 C14 F1 1
NL7 C04 F2 1
NL7 C03 F2 1
NL7 C22 F2 1
NL7 C07 F2 1
NL7 C06 F2 1
NL7 N05 F2 1
#
_pdbe_chem_comp_rdkit_properties.comp_id NL7
_pdbe_chem_comp_rdkit_properties.exactmw 344.014
_pdbe_chem_comp_rdkit_properties.amw 344.370
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 8
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 7
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 22
_pdbe_chem_comp_rdkit_properties.NumAtoms 34
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 10
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.083
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 144.130
_pdbe_chem_comp_rdkit_properties.tpsa 122.660
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.079
_pdbe_chem_comp_rdkit_properties.CrippenMR 77.560
_pdbe_chem_comp_rdkit_properties.chi0v 11.793
_pdbe_chem_comp_rdkit_properties.chi1v 7.852
_pdbe_chem_comp_rdkit_properties.chi2v 3.799
_pdbe_chem_comp_rdkit_properties.chi3v 3.799
_pdbe_chem_comp_rdkit_properties.chi4v 2.226
_pdbe_chem_comp_rdkit_properties.chi0n 22.160
_pdbe_chem_comp_rdkit_properties.chi1n 10.859
_pdbe_chem_comp_rdkit_properties.chi2n 1.952
_pdbe_chem_comp_rdkit_properties.chi3n 1.952
_pdbe_chem_comp_rdkit_properties.chi4n 1.096
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.170
_pdbe_chem_comp_rdkit_properties.kappa1 6.524
_pdbe_chem_comp_rdkit_properties.kappa2 5.909
_pdbe_chem_comp_rdkit_properties.kappa3 3.723
_pdbe_chem_comp_rdkit_properties.Phi 1.752
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
NL7 UniChem PDBe NL7
NL7 UniChem PubChem 145994352
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
NL7 C13 -1.020 -0.683 2.368 ETKDGv3 1
NL7 C15 -2.767 0.654 1.299 ETKDGv3 2
NL7 C20 -2.565 -0.153 0.073 ETKDGv3 3
NL7 C21 -1.648 -1.128 0.052 ETKDGv3 4
NL7 C22 1.912 -0.469 -0.472 ETKDGv3 5
NL7 C01 3.285 3.032 -1.155 ETKDGv3 6
NL7 C03 2.509 0.652 -1.227 ETKDGv3 7
NL7 C04 2.822 0.465 -2.524 ETKDGv3 8
NL7 C06 2.049 -1.799 -2.499 ETKDGv3 9
NL7 C07 1.679 -1.650 -1.074 ETKDGv3 10
NL7 C12 -0.828 -1.404 1.253 ETKDGv3 11
NL7 C14 -2.035 0.391 2.392 ETKDGv3 12
NL7 N05 2.576 -0.804 -3.150 ETKDGv3 13
NL7 N08 1.090 -2.766 -0.383 ETKDGv3 14
NL7 O02 2.725 1.867 -0.558 ETKDGv3 15
NL7 O10 1.480 -2.407 2.205 ETKDGv3 16
NL7 O11 -0.265 -3.986 1.532 ETKDGv3 17
NL7 O17 -4.302 2.356 -0.074 ETKDGv3 18
NL7 O18 -3.457 3.117 2.086 ETKDGv3 19
NL7 S09 0.391 -2.675 1.204 ETKDGv3 20
NL7 S16 -3.981 1.928 1.330 ETKDGv3 21
NL7 H131 -0.435 -0.874 3.259 ETKDGv3 22
NL7 H201 -3.160 0.040 -0.810 ETKDGv3 23
NL7 H211 -1.508 -1.713 -0.847 ETKDGv3 24
NL7 H221 1.676 -0.310 0.569 ETKDGv3 25
NL7 H012 3.336 3.839 -0.396 ETKDGv3 26
NL7 H013 4.313 2.819 -1.517 ETKDGv3 27
NL7 H011 2.646 3.375 -1.996 ETKDGv3 28
NL7 H041 3.261 1.256 -3.115 ETKDGv3 29
NL7 H061 1.879 -2.738 -3.009 ETKDGv3 30
NL7 H141 -2.177 0.962 3.302 ETKDGv3 31
NL7 H081 1.008 -3.679 -0.884 ETKDGv3 32
NL7 O1 -5.381 1.359 2.066 ETKDGv3 33
NL7 H1 -5.108 1.127 2.990 ETKDGv3 34
#