data_O25
#
_chem_comp.id O25
_chem_comp.name
2-[({4-[(ethylamino)methyl]-3-(trifluoromethyl)-1H-pyrazol-1-yl}acetyl)amino]-4,5,6,7-tetrahydro-1-benzothiophene-3-carboxamide
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C18 H22 F3 N5 O2 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2010-07-30
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 429.460
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code O25
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 3O6H
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
O25 C1 C1 C 0 1 Y N N N N N 1.997 -3.103 16.537 3.961 1.008 -0.228 C1 O25 1
O25 C2 C2 C 0 1 N N N N N N 1.980 -4.583 16.395 5.319 0.935 -0.878 C2 O25 2
O25 N5 N5 N 0 1 N N N N N N 3.025 -5.136 17.233 5.384 -0.249 -1.745 N5 O25 3
O25 C10 C10 C 0 1 N N N N N N 2.625 -6.266 18.066 6.697 -0.352 -2.396 C10 O25 4
O25 C13 C13 C 0 1 N N N N N N 3.516 -6.345 19.294 6.727 -1.594 -3.289 C13 O25 5
O25 C14 C14 C 0 1 Y N N N N N 1.465 -2.220 15.634 2.929 1.788 -0.626 C14 O25 6
O25 N16 N16 N 0 1 Y N N N N N 1.687 -0.981 16.128 1.895 1.558 0.209 N16 O25 7
O25 C17 C17 C 0 1 N N N N N N 1.302 0.278 15.550 0.576 2.193 0.142 C17 O25 8
O25 C20 C20 C 0 1 N N N N N N -0.194 0.363 15.603 -0.490 1.129 0.072 C20 O25 9
O25 N21 N21 N 0 1 N N N N N N -0.653 1.633 15.344 -1.789 1.481 0.003 N21 O25 10
O25 C23 C23 C 0 1 Y N N N N N -1.373 2.425 16.205 -2.770 0.503 -0.061 C23 O25 11
O25 C24 C24 C 0 1 Y N N N N N -1.531 3.791 16.339 -4.112 0.751 -0.133 C24 O25 12
O25 C25 C25 C 0 1 N N N N N N -0.818 4.701 15.457 -4.681 2.102 -0.151 C25 O25 13
O25 N26 N26 N 0 1 N N N N N N -1.089 6.033 15.560 -5.008 2.712 1.006 N26 O25 14
O25 O29 O29 O 0 1 N N N N N N 0.016 4.265 14.672 -4.858 2.674 -1.211 O29 O25 15
O25 C30 C30 C 0 1 Y N N N N N -2.433 4.083 17.446 -4.918 -0.454 -0.190 C30 O25 16
O25 C31 C31 C 0 1 N N N N N N -2.875 5.427 17.961 -6.436 -0.461 -0.274 C31 O25 17
O25 C34 C34 C 0 1 N N N N N N -3.996 5.313 19.006 -6.898 -1.843 -0.740 C34 O25 18
O25 C37 C37 C 0 1 N N N N N N -3.880 4.121 19.954 -6.233 -2.915 0.129 C37 O25 19
O25 C40 C40 C 0 1 N N N N N N -3.822 2.790 19.192 -4.740 -2.973 -0.205 C40 O25 20
O25 C43 C43 C 0 1 Y N N N N N -2.885 2.914 18.038 -4.175 -1.567 -0.160 C43 O25 21
O25 S44 S44 S 0 1 Y N N N N N -2.262 1.520 17.326 -2.467 -1.173 -0.068 S44 O25 22
O25 O45 O45 O 0 1 N N N N N N -0.868 -0.630 15.855 -0.178 -0.043 0.078 O45 O25 23
O25 N46 N46 N 0 1 Y N N N N N 2.318 -0.966 17.307 2.304 0.606 1.152 N46 O25 24
O25 C47 C47 C 0 1 Y N N N N N 2.538 -2.259 17.572 3.543 0.277 0.889 C47 O25 25
O25 C48 C48 C 0 1 N N N N N N 3.226 -2.624 18.851 4.373 -0.721 1.653 C48 O25 26
O25 F49 F49 F 0 1 N N N N N N 4.524 -3.023 18.746 5.293 -1.323 0.787 F49 O25 27
O25 F50 F50 F 0 1 N N N N N N 2.471 -3.560 19.474 5.061 -0.067 2.681 F50 O25 28
O25 F51 F51 F 0 1 N N N N N N 3.299 -1.568 19.688 3.538 -1.701 2.200 F51 O25 29
O25 H2 H2 H 0 1 N N N N N N 1.002 -4.977 16.710 5.485 1.832 -1.474 H2 O25 30
O25 H2A H2A H 0 1 N N N N N N 2.159 -4.859 15.345 6.087 0.864 -0.107 H2A O25 31
O25 HN5 HN5 H 0 1 N N N N N N 3.760 -5.450 16.632 5.170 -1.088 -1.228 HN5 O25 32
O25 H10 H10 H 0 1 N N N N N N 1.580 -6.133 18.383 6.873 0.536 -3.003 H10 O25 33
O25 H10A H10A H 0 0 N N N N N N 2.720 -7.196 17.487 7.474 -0.433 -1.637 H10A O25 34
O25 H13 H13 H 0 1 N N N N N N 3.209 -7.198 19.916 7.701 -1.671 -3.773 H13 O25 35
O25 H13A H13A H 0 0 N N N N N N 4.562 -6.478 18.980 6.551 -2.482 -2.682 H13A O25 36
O25 H13B H13B H 0 0 N N N N N N 3.423 -5.415 19.875 5.949 -1.514 -4.049 H13B O25 37
O25 H14 H14 H 0 1 N N N N N N 0.966 -2.466 14.708 2.933 2.471 -1.462 H14 O25 38
O25 H17 H17 H 0 1 N N N N N N 1.748 1.107 16.119 0.421 2.804 1.031 H17 O25 39
O25 H17A H17A H 0 0 N N N N N N 1.647 0.336 14.507 0.520 2.822 -0.746 H17A O25 40
O25 HN21 HN21 H 0 0 N N N N N N -0.443 2.016 14.444 -2.038 2.418 -0.001 HN21 O25 41
O25 HN26 HN26 H 0 0 N N N N N N -0.601 6.689 14.984 -4.866 2.256 1.850 HN26 O25 42
O25 HN2A HN2A H 0 0 N N N N N N -1.776 6.355 16.212 -5.384 3.606 0.993 HN2A O25 43
O25 H31 H31 H 0 1 N N N N N N -2.011 5.924 18.428 -6.858 -0.247 0.708 H31 O25 44
O25 H31A H31A H 0 0 N N N N N N -3.247 6.021 17.113 -6.766 0.294 -0.988 H31A O25 45
O25 H34 H34 H 0 1 N N N N N N -3.976 6.228 19.617 -7.981 -1.917 -0.645 H34 O25 46
O25 H34A H34A H 0 0 N N N N N N -4.948 5.216 18.464 -6.612 -1.990 -1.782 H34A O25 47
O25 H37 H37 H 0 1 N N N N N N -2.959 4.229 20.546 -6.362 -2.663 1.181 H37 O25 48
O25 H37A H37A H 0 0 N N N N N N -4.758 4.110 20.616 -6.691 -3.884 -0.073 H37A O25 49
O25 H40 H40 H 0 1 N N N N N N -3.468 1.997 19.867 -4.226 -3.597 0.527 H40 O25 50
O25 H40A H40A H 0 0 N N N N N N -4.826 2.536 18.822 -4.604 -3.392 -1.202 H40A O25 51
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
O25 C14 C1 DOUB Y N 1
O25 C2 C1 SING N N 2
O25 C1 C47 SING Y N 3
O25 C2 N5 SING N N 4
O25 C2 H2 SING N N 5
O25 C2 H2A SING N N 6
O25 N5 C10 SING N N 7
O25 N5 HN5 SING N N 8
O25 C10 C13 SING N N 9
O25 C10 H10 SING N N 10
O25 C10 H10A SING N N 11
O25 C13 H13 SING N N 12
O25 C13 H13A SING N N 13
O25 C13 H13B SING N N 14
O25 C14 N16 SING Y N 15
O25 C14 H14 SING N N 16
O25 C17 N16 SING N N 17
O25 N16 N46 SING Y N 18
O25 C17 C20 SING N N 19
O25 C17 H17 SING N N 20
O25 C17 H17A SING N N 21
O25 N21 C20 SING N N 22
O25 C20 O45 DOUB N N 23
O25 N21 C23 SING N N 24
O25 N21 HN21 SING N N 25
O25 C23 C24 DOUB Y N 26
O25 C23 S44 SING Y N 27
O25 C25 C24 SING N N 28
O25 C24 C30 SING Y N 29
O25 O29 C25 DOUB N N 30
O25 C25 N26 SING N N 31
O25 N26 HN26 SING N N 32
O25 N26 HN2A SING N N 33
O25 C30 C31 SING N N 34
O25 C30 C43 DOUB Y N 35
O25 C31 C34 SING N N 36
O25 C31 H31 SING N N 37
O25 C31 H31A SING N N 38
O25 C34 C37 SING N N 39
O25 C34 H34 SING N N 40
O25 C34 H34A SING N N 41
O25 C40 C37 SING N N 42
O25 C37 H37 SING N N 43
O25 C37 H37A SING N N 44
O25 C43 C40 SING N N 45
O25 C40 H40 SING N N 46
O25 C40 H40A SING N N 47
O25 S44 C43 SING Y N 48
O25 N46 C47 DOUB Y N 49
O25 C47 C48 SING N N 50
O25 F49 C48 SING N N 51
O25 C48 F50 SING N N 52
O25 C48 F51 SING N N 53
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
O25 SMILES ACDLabs 12.01 FC(F)(F)c1nn(cc1CNCC)CC(=O)Nc2sc3c(c2C(=O)N)CCCC3
O25 SMILES_CANONICAL CACTVS 3.370 CCNCc1cn(CC(=O)Nc2sc3CCCCc3c2C(N)=O)nc1C(F)(F)F
O25 SMILES CACTVS 3.370 CCNCc1cn(CC(=O)Nc2sc3CCCCc3c2C(N)=O)nc1C(F)(F)F
O25 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 CCNCc1cn(nc1C(F)(F)F)CC(=O)Nc2c(c3c(s2)CCCC3)C(=O)N
O25 SMILES "OpenEye OEToolkits" 1.7.0 CCNCc1cn(nc1C(F)(F)F)CC(=O)Nc2c(c3c(s2)CCCC3)C(=O)N
O25 InChI InChI 1.03 InChI=1S/C18H22F3N5O2S/c1-2-23-7-10-8-26(25-15(10)18(19,20)21)9-13(27)24-17-14(16(22)28)11-5-3-4-6-12(11)29-17/h8,23H,2-7,9H2,1H3,(H2,22,28)(H,24,27)
O25 InChIKey InChI 1.03 MEANENDBNRVQSP-UHFFFAOYSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
O25 "SYSTEMATIC NAME" ACDLabs 12.01 2-[({4-[(ethylamino)methyl]-3-(trifluoromethyl)-1H-pyrazol-1-yl}acetyl)amino]-4,5,6,7-tetrahydro-1-benzothiophene-3-carboxamide
O25 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 2-[2-[4-(ethylaminomethyl)-3-(trifluoromethyl)pyrazol-1-yl]ethanoylamino]-4,5,6,7-tetrahydro-1-benzothiophene-3-carboxamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
O25 'Create component' 2010-07-30 RCSB
O25 'Modify aromatic_flag' 2011-06-04 RCSB
O25 'Modify descriptor' 2011-06-04 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
O25 C1 C 14.196 -2.561 1
O25 C2 C 15.567 -3.171 2
O25 N5 N 16.780 -2.289 3
O25 C10 C 18.151 -2.900 4
O25 C13 C 19.364 -2.018 5
O25 C14 C 13.885 -1.094 6
O25 N16 N 12.393 -0.937 7
O25 C17 C 11.643 0.362 8
O25 C20 C 10.143 0.362 9
O25 N21 N 9.393 1.661 10
O25 C23 C 7.893 1.661 11
O25 C24 C 7.018 2.868 12
O25 C25 C 7.483 4.294 13
O25 N26 N 6.482 5.410 14
O25 O29 O 8.951 4.603 15
O25 C30 C 5.598 2.411 16
O25 C31 C 4.299 3.161 17
O25 C34 C 3.000 2.411 18
O25 C37 C 3.000 0.911 19
O25 C40 C 4.299 0.161 20
O25 C43 C 5.598 0.911 21
O25 S44 S 7.018 0.454 22
O25 O45 O 9.393 -0.937 23
O25 N46 N 11.783 -2.307 24
O25 C47 C 12.897 -3.311 25
O25 C48 C 12.741 -4.803 26
O25 F49 F 12.584 -6.294 27
O25 F50 F 11.249 -4.646 28
O25 F51 F 14.232 -4.959 29
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
O25 C14 C1 DOUBLE NONE 1
O25 C2 C1 SINGLE NONE 2
O25 C1 C47 SINGLE NONE 3
O25 C2 N5 SINGLE NONE 4
O25 N5 C10 SINGLE NONE 5
O25 C10 C13 SINGLE NONE 6
O25 C14 N16 SINGLE NONE 7
O25 C17 N16 SINGLE NONE 8
O25 N16 N46 SINGLE NONE 9
O25 C17 C20 SINGLE NONE 10
O25 N21 C20 SINGLE NONE 11
O25 C20 O45 DOUBLE NONE 12
O25 N21 C23 SINGLE NONE 13
O25 C23 C24 DOUBLE NONE 14
O25 C23 S44 SINGLE NONE 15
O25 C25 C24 SINGLE NONE 16
O25 C24 C30 SINGLE NONE 17
O25 O29 C25 DOUBLE NONE 18
O25 C25 N26 SINGLE NONE 19
O25 C30 C31 SINGLE NONE 20
O25 C30 C43 DOUBLE NONE 21
O25 C31 C34 SINGLE NONE 22
O25 C34 C37 SINGLE NONE 23
O25 C40 C37 SINGLE NONE 24
O25 C43 C40 SINGLE NONE 25
O25 S44 C43 SINGLE NONE 26
O25 N46 C47 DOUBLE NONE 27
O25 C47 C48 SINGLE NONE 28
O25 F49 C48 SINGLE NONE 29
O25 C48 F50 SINGLE NONE 30
O25 C48 F51 SINGLE NONE 31
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
O25 MurckoScaffold S1 scaffold O=C(Cn1cccn1)Nc1cc2c(s1)CCCC2 InChI=1S/C13H15N3OS/c17-12(9-16-7-3-6-14-16)15-13-8-10-4-1-2-5-11(10)18-13/h3,6-8H,1-2,4-5,9H2,(H,15,17) ZFLQLCASOAJXDJ-UHFFFAOYSA-N
O25 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
O25 peptide F2 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
O25 pyrazole F3 fragment 'c1cn[nH]c1' InChI=1S/C3H4N2/c1-2-4-5-3-1/h1-3H,(H,4,5) WTKZEGDFNFYCGP-UHFFFAOYSA-N
O25 thiophen F4 fragment c1ccsc1 InChI=1S/C4H4S/c1-2-4-5-3-1/h1-4H YTPLMLYBLZKORZ-UHFFFAOYSA-N
O25 Z56951191 F5 fragment CC(=O)Nc1cc(C)c(C)s1 InChI=1S/C8H11NOS/c1-5-4-8(9-7(3)10)11-6(5)2/h4H,1-3H3,(H,9,10) CPTWNJFKDSOTAR-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
O25 C1 S1 1
O25 C14 S1 1
O25 N16 S1 1
O25 C17 S1 1
O25 C20 S1 1
O25 N21 S1 1
O25 C23 S1 1
O25 C24 S1 1
O25 C30 S1 1
O25 C31 S1 1
O25 C34 S1 1
O25 C37 S1 1
O25 C40 S1 1
O25 C43 S1 1
O25 S44 S1 1
O25 O45 S1 1
O25 N46 S1 1
O25 C47 S1 1
O25 N21 F1 1
O25 C20 F1 1
O25 O45 F1 1
O25 C17 F1 1
O25 N26 F1 2
O25 C25 F1 2
O25 O29 F1 2
O25 C24 F1 2
O25 O45 F2 1
O25 C20 F2 1
O25 C17 F2 1
O25 N16 F2 1
O25 C14 F3 1
O25 C1 F3 1
O25 C47 F3 1
O25 N46 F3 1
O25 N16 F3 1
O25 C23 F4 1
O25 C24 F4 1
O25 C30 F4 1
O25 C43 F4 1
O25 S44 F4 1
O25 C17 F5 1
O25 C20 F5 1
O25 O45 F5 1
O25 N21 F5 1
O25 C23 F5 1
O25 C24 F5 1
O25 C30 F5 1
O25 C31 F5 1
O25 C43 F5 1
O25 C40 F5 1
O25 S44 F5 1
#
_pdbe_chem_comp_rdkit_properties.comp_id O25
_pdbe_chem_comp_rdkit_properties.exactmw 429.145
_pdbe_chem_comp_rdkit_properties.amw 429.468
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 7
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 4
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 8
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 6
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 29
_pdbe_chem_comp_rdkit_properties.NumAtoms 51
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 11
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.500
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 200.145
_pdbe_chem_comp_rdkit_properties.tpsa 102.040
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.035
_pdbe_chem_comp_rdkit_properties.CrippenMR 100.564
_pdbe_chem_comp_rdkit_properties.chi0v 14.411
_pdbe_chem_comp_rdkit_properties.chi1v 7.939
_pdbe_chem_comp_rdkit_properties.chi2v 4.080
_pdbe_chem_comp_rdkit_properties.chi3v 4.080
_pdbe_chem_comp_rdkit_properties.chi4v 3.011
_pdbe_chem_comp_rdkit_properties.chi0n 35.595
_pdbe_chem_comp_rdkit_properties.chi1n 17.911
_pdbe_chem_comp_rdkit_properties.chi2n 3.081
_pdbe_chem_comp_rdkit_properties.chi3n 3.081
_pdbe_chem_comp_rdkit_properties.chi4n 2.040
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.400
_pdbe_chem_comp_rdkit_properties.kappa1 6.809
_pdbe_chem_comp_rdkit_properties.kappa2 8.537
_pdbe_chem_comp_rdkit_properties.kappa3 4.783
_pdbe_chem_comp_rdkit_properties.Phi 2.004
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
O25 UniChem ChEMBL CHEMBL1234887
O25 UniChem PDBe O25
O25 UniChem ZINC ZINC000058650638
O25 UniChem SureChEMBL SCHEMBL3452636
O25 UniChem BindingDb 50417073
O25 UniChem PubChem 24967783
O25 UniChem 'PubChem TPHARMA' 56265930
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
O25 C1 3.174 0.212 -0.096 ETKDGv3 1
O25 C2 3.977 0.697 1.072 ETKDGv3 2
O25 N5 5.397 0.757 0.709 ETKDGv3 3
O25 C10 6.185 1.289 1.825 ETKDGv3 4
O25 C13 7.644 1.439 1.411 ETKDGv3 5
O25 C14 2.771 0.948 -1.122 ETKDGv3 6
O25 N16 2.087 0.100 -2.035 ETKDGv3 7
O25 C17 1.197 0.543 -3.099 ETKDGv3 8
O25 C20 -0.131 0.925 -2.523 ETKDGv3 9
O25 N21 -1.010 -0.092 -2.018 ETKDGv3 10
O25 C23 -2.154 0.184 -1.192 ETKDGv3 11
O25 C24 -3.126 -0.700 -0.911 ETKDGv3 12
O25 C25 -3.211 -2.039 -1.530 ETKDGv3 13
O25 N26 -3.477 -3.195 -0.737 ETKDGv3 14
O25 O29 -3.042 -2.167 -2.773 ETKDGv3 15
O25 C30 -4.140 -0.176 0.051 ETKDGv3 16
O25 C31 -5.358 -0.945 0.507 ETKDGv3 17
O25 C34 -6.439 -0.018 1.083 ETKDGv3 18
O25 C37 -5.826 0.974 2.081 ETKDGv3 19
O25 C40 -4.778 1.858 1.391 ETKDGv3 20
O25 C43 -3.865 1.051 0.513 ETKDGv3 21
O25 S44 -2.393 1.680 -0.251 ETKDGv3 22
O25 O45 -0.462 2.140 -2.484 ETKDGv3 23
O25 N46 2.072 -1.190 -1.495 ETKDGv3 24
O25 C47 2.727 -1.159 -0.379 ETKDGv3 25
O25 C48 2.889 -2.348 0.516 ETKDGv3 26
O25 F49 4.218 -2.494 0.863 ETKDGv3 27
O25 F50 2.466 -3.497 -0.130 ETKDGv3 28
O25 F51 2.134 -2.169 1.660 ETKDGv3 29
O25 H2 3.824 0.017 1.939 ETKDGv3 30
O25 H2A 3.611 1.709 1.357 ETKDGv3 31
O25 HN5 5.722 -0.222 0.524 ETKDGv3 32
O25 H10 5.803 2.291 2.121 ETKDGv3 33
O25 H10A 6.125 0.608 2.704 ETKDGv3 34
O25 H13 8.230 1.866 2.252 ETKDGv3 35
O25 H13A 7.724 2.120 0.537 ETKDGv3 36
O25 H13B 8.072 0.449 1.144 ETKDGv3 37
O25 H14 2.920 2.013 -1.247 ETKDGv3 38
O25 H17 1.652 1.407 -3.629 ETKDGv3 39
O25 H17A 1.061 -0.278 -3.836 ETKDGv3 40
O25 HN21 -0.768 -1.086 -2.230 ETKDGv3 41
O25 HN26 -3.588 -4.129 -1.190 ETKDGv3 42
O25 HN2A -3.485 -3.140 0.305 ETKDGv3 43
O25 H31 -5.787 -1.514 -0.345 ETKDGv3 44
O25 H31A -5.050 -1.666 1.294 ETKDGv3 45
O25 H34 -7.214 -0.628 1.595 ETKDGv3 46
O25 H34A -6.931 0.541 0.257 ETKDGv3 47
O25 H37 -5.351 0.414 2.916 ETKDGv3 48
O25 H37A -6.627 1.615 2.508 ETKDGv3 49
O25 H40 -5.292 2.615 0.762 ETKDGv3 50
O25 H40A -4.178 2.391 2.159 ETKDGv3 51
#