data_OIG
#
_chem_comp.id OIG
_chem_comp.name "beta-ethyl-adenosine diphosphate"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C12 H19 N5 O10 P2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms
"[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] ethyl hydrogen phosphate; [[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] ethyl hydrogen phosphate; beta-ethyl-ADP"
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2022-09-07
_chem_comp.pdbx_modified_date 2024-03-15
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 455.254
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code OIG
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 8AZO
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
OIG "C4'" C1 C 0 1 N N R N N N 20.292 -6.806 -8.228 -0.689 1.885 -0.506 C13 OIG 1
OIG "C1'" C2 C 0 1 N N R N N N 21.839 -5.118 -8.196 -2.727 0.790 -0.604 C15 OIG 2
OIG C8 C3 C 0 1 Y N N N N N 23.062 -4.462 -6.107 -3.035 -1.224 0.885 C17 OIG 3
OIG C6 C4 C 0 1 Y N N N N N 22.534 -0.925 -6.008 -6.361 -2.360 0.327 C20 OIG 4
OIG "C2'" C5 C 0 1 N N R N N N 22.548 -6.615 -8.116 -3.020 2.096 0.177 C26 OIG 5
OIG "C3'" C6 C 0 1 N N S N N N 21.700 -7.357 -8.702 -1.745 2.931 -0.099 C28 OIG 6
OIG C05 C7 C 0 1 N N N N N N 18.451 -10.736 -2.085 6.997 -2.447 -0.945 C05 OIG 7
OIG C06 C8 C 0 1 N N N N N N 19.261 -11.270 -0.904 6.902 -3.705 -1.810 C06 OIG 8
OIG "C5'" C9 C 0 1 N N N N N N 19.747 -7.477 -7.106 0.508 1.959 0.443 C12 OIG 9
OIG C5 C10 C 0 1 Y N N N N N 22.676 -2.318 -6.150 -5.079 -1.795 0.440 C19 OIG 10
OIG C2 C11 C 0 1 Y N N N N N 21.317 -0.828 -7.958 -6.898 -0.744 -1.232 C23 OIG 11
OIG C4 C12 C 0 1 Y N N N N N 22.091 -2.892 -7.258 -4.780 -0.669 -0.345 C25 OIG 12
OIG N9 N1 N 0 1 Y N N N N N 22.339 -4.207 -7.205 -3.486 -0.329 -0.040 N16 OIG 13
OIG N7 N2 N 0 1 Y N N N N N 23.270 -3.306 -5.451 -3.971 -2.085 1.162 N18 OIG 14
OIG N6 N3 N 0 1 N N N N N N 23.143 -0.231 -4.871 -6.711 -3.475 1.068 N21 OIG 15
OIG N1 N4 N 0 1 Y N N N N N 21.863 -0.227 -6.902 -7.230 -1.798 -0.507 N22 OIG 16
OIG N3 N5 N 0 1 Y N N N N N 21.419 -2.141 -8.137 -5.712 -0.180 -1.157 N24 OIG 17
OIG O1B O1 O 0 1 N N N N N N 19.436 -11.107 -5.791 5.878 -0.653 1.357 O01 OIG 18
OIG O2B O2 O 0 1 N N N N N N 17.194 -10.557 -4.740 6.277 0.744 -0.707 O03 OIG 19
OIG O3B O3 O 0 1 N N N N N N 19.128 -11.162 -3.219 5.715 -1.819 -0.875 O04 OIG 20
OIG O3A O4 O 0 1 N N N N N N 19.071 -8.893 -4.549 3.874 -0.120 -0.080 O07 OIG 21
OIG O1A O5 O 0 1 N N N N N N 21.636 -9.133 -4.196 3.591 2.188 0.902 O09 OIG 22
OIG O2A O6 O 0 1 N N N N N N 20.465 -6.884 -3.904 2.666 0.248 2.226 O10 OIG 23
OIG "O5'" O7 O 0 1 N N N N N N 20.814 -7.905 -6.280 1.523 1.056 -0.000 O11 OIG 24
OIG "O4'" O8 O 0 1 N N N N N N 20.580 -5.322 -7.918 -1.310 0.592 -0.412 O14 OIG 25
OIG "O2'" O9 O 0 1 N N N N N N 23.894 -6.643 -8.708 -4.181 2.750 -0.340 O27 OIG 26
OIG "O3'" O10 O 0 1 N N N N N N 21.751 -7.150 -10.199 -1.973 3.854 -1.167 O29 OIG 27
OIG PB P1 P 0 1 N N N N N N 18.699 -10.474 -4.629 5.445 -0.466 -0.045 P02 OIG 28
OIG PA P2 P 0 1 N N N N N N 20.544 -8.199 -4.663 2.928 0.872 0.765 P08 OIG 29
OIG "H4'" H1 H 0 1 N N N N N N 19.599 -6.859 -9.080 -0.362 2.066 -1.530 H1 OIG 30
OIG "H1'" H2 H 0 1 N N N N N N 21.998 -4.721 -9.209 -2.957 0.916 -1.663 H2 OIG 31
OIG H8 H3 H 0 1 N N N N N N 23.419 -5.434 -5.799 -2.047 -1.221 1.319 H3 OIG 32
OIG "H2'" H4 H 0 1 N N N N N N 22.631 -6.862 -7.047 -3.130 1.896 1.242 H4 OIG 33
OIG "H3'" H5 H 0 1 N N N N N N 21.778 -8.427 -8.457 -1.433 3.459 0.802 H5 OIG 34
OIG H6 H6 H 0 1 N N N N N N 18.405 -9.637 -2.054 7.322 -2.720 0.059 H6 OIG 35
OIG H7 H7 H 0 1 N N N N N N 17.431 -11.147 -2.069 7.717 -1.757 -1.384 H7 OIG 36
OIG H1 H8 H 0 1 N N N N N N 18.779 -10.968 0.038 6.577 -3.432 -2.814 H8 OIG 37
OIG H9 H9 H 0 1 N N N N N N 19.306 -12.368 -0.957 7.880 -4.184 -1.863 H9 OIG 38
OIG H10 H10 H 0 1 N N N N N N 20.280 -10.858 -0.943 6.183 -4.396 -1.370 H10 OIG 39
OIG "H5'1" H11 H 0 1 N N N N N N 19.094 -6.792 -6.545 0.903 2.974 0.452 H11 OIG 40
OIG "H5'2" H12 H 0 1 N N N N N N 19.164 -8.348 -7.441 0.191 1.683 1.449 H12 OIG 41
OIG H2 H13 H 0 1 N N N N N N 20.780 -0.236 -8.684 -7.635 -0.319 -1.898 H13 OIG 42
OIG HN61 H14 H 0 1 N N N N N N 22.951 0.748 -4.936 -6.069 -3.876 1.673 H14 OIG 43
OIG HN62 H15 H 0 1 N N N N N N 22.762 -0.590 -4.019 -7.599 -3.856 0.981 H15 OIG 44
OIG HOB2 H16 H 0 1 N N N N N N 16.960 -11.006 -5.544 6.044 0.923 -1.628 H16 OIG 45
OIG HOA2 H17 H 0 1 N N N N N N 21.140 -6.863 -3.235 2.233 -0.616 2.212 H17 OIG 46
OIG "HO2'" H18 H 0 1 N N N N N N 24.468 -6.066 -8.218 -4.404 3.573 0.117 H18 OIG 47
OIG "HO3'" H19 H 0 1 N N N N N N 22.581 -7.466 -10.535 -2.630 4.535 -0.965 H19 OIG 48
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
OIG "O3'" "C3'" SING N N 1
OIG "O2'" "C2'" SING N N 2
OIG "C3'" "C4'" SING N N 3
OIG "C3'" "C2'" SING N N 4
OIG "C4'" "O4'" SING N N 5
OIG "C4'" "C5'" SING N N 6
OIG "C1'" "C2'" SING N N 7
OIG "C1'" "O4'" SING N N 8
OIG "C1'" N9 SING N N 9
OIG N3 C2 DOUB Y N 10
OIG N3 C4 SING Y N 11
OIG C2 N1 SING Y N 12
OIG C4 N9 SING Y N 13
OIG C4 C5 DOUB Y N 14
OIG N9 C8 SING Y N 15
OIG "C5'" "O5'" SING N N 16
OIG N1 C6 DOUB Y N 17
OIG "O5'" PA SING N N 18
OIG C5 C6 SING Y N 19
OIG C5 N7 SING Y N 20
OIG C8 N7 DOUB Y N 21
OIG C6 N6 SING N N 22
OIG O1B PB DOUB N N 23
OIG O2B PB SING N N 24
OIG PA O3A SING N N 25
OIG PA O1A DOUB N N 26
OIG PA O2A SING N N 27
OIG PB O3A SING N N 28
OIG PB O3B SING N N 29
OIG O3B C05 SING N N 30
OIG C05 C06 SING N N 31
OIG "C4'" "H4'" SING N N 32
OIG "C1'" "H1'" SING N N 33
OIG C8 H8 SING N N 34
OIG "C2'" "H2'" SING N N 35
OIG "C3'" "H3'" SING N N 36
OIG C05 H6 SING N N 37
OIG C05 H7 SING N N 38
OIG C06 H1 SING N N 39
OIG C06 H9 SING N N 40
OIG C06 H10 SING N N 41
OIG "C5'" "H5'1" SING N N 42
OIG "C5'" "H5'2" SING N N 43
OIG C2 H2 SING N N 44
OIG N6 HN61 SING N N 45
OIG N6 HN62 SING N N 46
OIG O2B HOB2 SING N N 47
OIG O2A HOA2 SING N N 48
OIG "O2'" "HO2'" SING N N 49
OIG "O3'" "HO3'" SING N N 50
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
OIG InChI InChI 1.06 "InChI=1S/C12H19N5O10P2/c1-2-24-28(20,21)27-29(22,23)25-3-6-8(18)9(19)12(26-6)17-5-16-7-10(13)14-4-15-11(7)17/h4-6,8-9,12,18-19H,2-3H2,1H3,(H,20,21)(H,22,23)(H2,13,14,15)/t6-,8-,9-,12-/m1/s1"
OIG InChIKey InChI 1.06 OBBAXRNSCNGYQO-WOUKDFQISA-N
OIG SMILES_CANONICAL CACTVS 3.385 "CCO[P](O)(=O)O[P](O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23"
OIG SMILES CACTVS 3.385 "CCO[P](O)(=O)O[P](O)(=O)OC[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23"
OIG SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CCOP(=O)(O)OP(=O)(O)OC[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)O"
OIG SMILES "OpenEye OEToolkits" 3.1.0.0 "CCOP(=O)(O)OP(=O)(O)OCC1C(C(C(O1)n2cnc3c2ncnc3N)O)O"
#
_pdbx_chem_comp_identifier.comp_id OIG
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 3.1.0.0
_pdbx_chem_comp_identifier.identifier
"[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] ethyl hydrogen phosphate"
#
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1 OIG "[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] ethyl hydrogen phosphate" PDB ?
2 OIG "[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] ethyl hydrogen phosphate" PUBCHEM ?
3 OIG beta-ethyl-ADP AUTHOR ?
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
OIG 'Create component' 2022-09-08 PDBE
OIG 'Initial release' 2024-03-20 RCSB
#
loop_
_pdbe_chem_comp_synonyms.comp_id
_pdbe_chem_comp_synonyms.name
_pdbe_chem_comp_synonyms.provenance
_pdbe_chem_comp_synonyms.type
OIG '[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] ethyl hydrogen phosphate' wwPDB ?
OIG '[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] ethyl hydrogen phosphate' wwPDB ?
OIG beta-ethyl-ADP wwPDB ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
OIG "C4'" C 8.913 2.261 1
OIG "C1'" C 7.483 0.300 2
OIG C8 C 7.893 -2.333 3
OIG C6 C 4.299 -3.833 4
OIG "C2'" C 6.604 1.515 5
OIG "C3'" C 7.487 2.727 6
OIG C05 C 17.881 3.942 7
OIG C06 C 19.251 3.330 8
OIG "C5'" C 10.129 3.141 9
OIG C5 C 5.598 -3.083 10
OIG C2 C 3.000 -1.583 11
OIG C4 C 5.598 -1.583 12
OIG N9 N 7.018 -1.126 13
OIG N7 N 7.018 -3.540 14
OIG N6 N 4.299 -5.333 15
OIG N1 N 3.000 -3.083 16
OIG N3 N 4.299 -0.833 17
OIG O1B O 15.909 5.044 18
OIG O2B O 14.684 2.306 19
OIG O3B O 16.666 3.062 20
OIG O3A O 13.928 4.288 21
OIG O1A O 13.592 2.193 22
OIG O2A O 11.833 4.623 23
OIG "O5'" O 11.498 2.528 24
OIG "O4'" O 8.911 0.761 25
OIG "O2'" O 5.104 1.518 26
OIG "O3'" O 7.027 4.155 27
OIG PB P 15.297 3.675 28
OIG PA P 12.713 3.408 29
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
OIG "C3'" "O3'" SINGLE BEGINDASH 1
OIG "C2'" "O2'" SINGLE BEGINDASH 2
OIG "C3'" "C4'" SINGLE NONE 3
OIG "C3'" "C2'" SINGLE NONE 4
OIG "C4'" "O4'" SINGLE NONE 5
OIG "C4'" "C5'" SINGLE BEGINWEDGE 6
OIG "C1'" "C2'" SINGLE NONE 7
OIG "C1'" "O4'" SINGLE NONE 8
OIG "C1'" N9 SINGLE BEGINWEDGE 9
OIG N3 C2 SINGLE NONE 10
OIG N3 C4 DOUBLE NONE 11
OIG C2 N1 DOUBLE NONE 12
OIG C4 N9 SINGLE NONE 13
OIG C4 C5 SINGLE NONE 14
OIG N9 C8 SINGLE NONE 15
OIG "C5'" "O5'" SINGLE NONE 16
OIG N1 C6 SINGLE NONE 17
OIG "O5'" PA SINGLE NONE 18
OIG C5 C6 DOUBLE NONE 19
OIG C5 N7 SINGLE NONE 20
OIG C8 N7 DOUBLE NONE 21
OIG C6 N6 SINGLE NONE 22
OIG O1B PB DOUBLE NONE 23
OIG PB O2B SINGLE BEGINDASH 24
OIG PA O3A SINGLE NONE 25
OIG PA O1A DOUBLE NONE 26
OIG PA O2A SINGLE BEGINDASH 27
OIG PB O3A SINGLE NONE 28
OIG PB O3B SINGLE NONE 29
OIG O3B C05 SINGLE NONE 30
OIG C05 C06 SINGLE NONE 31
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
OIG MurckoScaffold S1 scaffold 'c1ncc2ncn([C@H]3CCCO3)c2n1' InChI=1S/C9H10N4O/c1-2-8(14-3-1)13-6-12-7-4-10-5-11-9(7)13/h4-6,8H,1-3H2/t8-/m1/s1 DAKONNSVCLKUJN-MRVPVSSYSA-N
OIG adenine F1 fragment 'Nc1ncnc2nc[nH]c12' InChI=1S/C5H5N5/c6-4-3-5(9-1-7-3)10-2-8-4/h1-2H,(H3,6,7,8,9,10) GFFGJBXGBJISGV-UHFFFAOYSA-N
OIG imidazole F2 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
OIG phosphate F3 fragment O=P(O)(O)O InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4) NBIIXXVUZAFLBC-UHFFFAOYSA-N
OIG purine F4 fragment 'c1ncc2[nH]cnc2n1' InChI=1S/C5H4N4/c1-4-5(8-2-6-1)9-3-7-4/h1-3H,(H,6,7,8,9) KDCGOANMDULRCW-UHFFFAOYSA-N
OIG pyrimidine F5 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
OIG ribose F6 fragment OCC1OCC(O)C1O InChI=1S/C5H10O4/c6-1-4-5(8)3(7)2-9-4/h3-8H,1-2H2 KZVAAIRBJJYZOW-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
OIG "C4'" S1 1
OIG "C1'" S1 1
OIG C8 S1 1
OIG C6 S1 1
OIG "C2'" S1 1
OIG "C3'" S1 1
OIG C5 S1 1
OIG C2 S1 1
OIG C4 S1 1
OIG N9 S1 1
OIG N7 S1 1
OIG N1 S1 1
OIG N3 S1 1
OIG "O4'" S1 1
OIG N1 F1 1
OIG C6 F1 1
OIG C5 F1 1
OIG C4 F1 1
OIG N3 F1 1
OIG C2 F1 1
OIG N9 F1 1
OIG C8 F1 1
OIG N7 F1 1
OIG N6 F1 1
OIG C5 F2 1
OIG C4 F2 1
OIG N9 F2 1
OIG C8 F2 1
OIG N7 F2 1
OIG O2B F3 1
OIG PB F3 1
OIG O1B F3 1
OIG O3A F3 1
OIG O3B F3 1
OIG O3A F3 2
OIG PA F3 2
OIG O1A F3 2
OIG "O5'" F3 2
OIG O2A F3 2
OIG N7 F4 1
OIG C8 F4 1
OIG N9 F4 1
OIG C4 F4 1
OIG C5 F4 1
OIG C6 F4 1
OIG N1 F4 1
OIG C2 F4 1
OIG N3 F4 1
OIG C5 F5 1
OIG C4 F5 1
OIG N3 F5 1
OIG C2 F5 1
OIG N1 F5 1
OIG C6 F5 1
OIG "C2'" F6 1
OIG "C3'" F6 1
OIG "C4'" F6 1
OIG "O4'" F6 1
OIG "C1'" F6 1
OIG "C5'" F6 1
OIG "O5'" F6 1
OIG "O3'" F6 1
OIG "O2'" F6 1
#
_pdbe_chem_comp_rdkit_properties.comp_id OIG
_pdbe_chem_comp_rdkit_properties.exactmw 455.061
_pdbe_chem_comp_rdkit_properties.amw 455.257
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 15
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 6
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 14
_pdbe_chem_comp_rdkit_properties.NumHBD 5
_pdbe_chem_comp_rdkit_properties.NumHBA 15
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 29
_pdbe_chem_comp_rdkit_properties.NumAtoms 48
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 17
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.583
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 6
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 189.967
_pdbe_chem_comp_rdkit_properties.tpsa 221.600
_pdbe_chem_comp_rdkit_properties.CrippenClogP -1.511
_pdbe_chem_comp_rdkit_properties.CrippenMR 90.943
_pdbe_chem_comp_rdkit_properties.chi0v 15.002
_pdbe_chem_comp_rdkit_properties.chi1v 9.593
_pdbe_chem_comp_rdkit_properties.chi2v 5.055
_pdbe_chem_comp_rdkit_properties.chi3v 5.055
_pdbe_chem_comp_rdkit_properties.chi4v 3.337
_pdbe_chem_comp_rdkit_properties.chi0n 32.213
_pdbe_chem_comp_rdkit_properties.chi1n 15.699
_pdbe_chem_comp_rdkit_properties.chi2n 2.825
_pdbe_chem_comp_rdkit_properties.chi3n 2.825
_pdbe_chem_comp_rdkit_properties.chi4n 1.784
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.510
_pdbe_chem_comp_rdkit_properties.kappa1 8.204
_pdbe_chem_comp_rdkit_properties.kappa2 8.317
_pdbe_chem_comp_rdkit_properties.kappa3 4.807
_pdbe_chem_comp_rdkit_properties.Phi 2.353
#
_pdbe_chem_comp_external_mappings.comp_id OIG
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PubChem
_pdbe_chem_comp_external_mappings.resource_id 154585732
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
OIG "C4'" -0.436 0.300 1.102 ETKDGv3 1
OIG "C1'" 1.682 1.161 0.910 ETKDGv3 2
OIG C8 3.442 -0.748 0.879 ETKDGv3 3
OIG C6 6.213 0.540 -0.769 ETKDGv3 4
OIG "C2'" 0.854 1.806 -0.202 ETKDGv3 5
OIG "C3'" -0.569 1.558 0.241 ETKDGv3 6
OIG C05 -5.085 -0.113 0.232 ETKDGv3 7
OIG C06 -4.732 1.159 0.988 ETKDGv3 8
OIG "C5'" -0.697 -0.985 0.304 ETKDGv3 9
OIG C5 5.034 0.172 -0.271 ETKDGv3 10
OIG C2 5.239 2.619 -1.486 ETKDGv3 11
OIG C4 3.917 1.039 -0.360 ETKDGv3 12
OIG N9 2.843 0.460 0.358 ETKDGv3 13
OIG N7 4.686 -0.948 0.530 ETKDGv3 14
OIG N6 7.375 -0.280 -0.642 ETKDGv3 15
OIG N1 6.285 1.828 -1.423 ETKDGv3 16
OIG N3 3.980 2.220 -0.895 ETKDGv3 17
OIG O1B -4.418 -3.835 0.799 ETKDGv3 18
OIG O2B -6.474 -2.771 -0.376 ETKDGv3 19
OIG O3B -4.582 -1.221 0.940 ETKDGv3 20
OIG O3A -3.941 -2.551 -1.457 ETKDGv3 21
OIG O1A -1.499 -2.308 -2.337 ETKDGv3 22
OIG O2A -1.782 -3.787 -0.204 ETKDGv3 23
OIG "O5'" -2.037 -1.005 -0.124 ETKDGv3 24
OIG "O4'" 0.871 0.255 1.634 ETKDGv3 25
OIG "O2'" 1.143 3.175 -0.320 ETKDGv3 26
OIG "O3'" -1.085 2.634 0.991 ETKDGv3 27
OIG PB -4.829 -2.621 -0.004 ETKDGv3 28
OIG PA -2.292 -2.412 -1.054 ETKDGv3 29
OIG "H4'" -1.162 0.336 1.944 ETKDGv3 30
OIG "H1'" 2.039 1.939 1.621 ETKDGv3 31
OIG H8 2.912 -1.436 1.524 ETKDGv3 32
OIG "H2'" 1.038 1.284 -1.171 ETKDGv3 33
OIG "H3'" -1.228 1.400 -0.641 ETKDGv3 34
OIG H6 -4.637 -0.040 -0.785 ETKDGv3 35
OIG H7 -6.193 -0.172 0.152 ETKDGv3 36
OIG H1 -5.121 2.043 0.441 ETKDGv3 37
OIG H9 -5.182 1.136 2.003 ETKDGv3 38
OIG H10 -3.629 1.250 1.082 ETKDGv3 39
OIG "H5'1" 0.004 -1.021 -0.562 ETKDGv3 40
OIG "H5'2" -0.494 -1.850 0.975 ETKDGv3 41
OIG H2 5.322 3.581 -1.973 ETKDGv3 42
OIG HN61 7.333 -1.208 -0.165 ETKDGv3 43
OIG HN62 8.287 0.045 -1.033 ETKDGv3 44
OIG HOB2 -6.588 -2.286 -1.232 ETKDGv3 45
OIG HOA2 -1.997 -4.547 -0.801 ETKDGv3 46
OIG "HO2'" 0.700 3.484 -1.154 ETKDGv3 47
OIG "HO3'" -0.510 2.760 1.792 ETKDGv3 48
#