data_ONV
#
_chem_comp.id ONV
_chem_comp.name
"4-{(1S)-1-[(5-chloro-6-{[(5S)-2-oxo-1,3-oxazolidin-5-yl]methoxy}-1H-indole-2-carbonyl)amino]-2-hydroxyethyl}benzoic acid"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C22 H20 Cl N3 O7"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2019-07-01
_chem_comp.pdbx_modified_date 2019-07-19
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 473.863
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code ONV
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6PLF
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
ONV C1 C1 C 0 1 N N S N N N 15.862 24.646 -11.146 5.754 2.182 0.680 C1 ONV 1
ONV C2 C2 C 0 1 N N N N N N 14.784 24.169 -12.108 5.469 3.695 0.611 C2 ONV 2
ONV C3 C3 C 0 1 N N N N N N 15.575 24.082 -9.770 4.458 1.384 0.525 C3 ONV 3
ONV C4 C4 C 0 1 Y N N N N N 15.011 25.702 -7.992 3.687 -0.864 0.553 C4 ONV 4
ONV C5 C5 C 0 1 Y N N N N N 15.406 25.156 -6.780 3.895 -2.239 0.679 C5 ONV 5
ONV C6 C6 C 0 1 Y N N N N N 14.742 27.000 -8.147 2.420 -0.365 0.321 C6 ONV 6
ONV C7 C7 C 0 1 Y N N N N N 14.828 27.800 -7.072 1.342 -1.238 0.213 C7 ONV 7
ONV C8 C8 C 0 1 Y N N N N N 15.212 27.273 -5.847 1.557 -2.625 0.341 C8 ONV 8
ONV C9 C9 C 0 1 Y N N N N N 15.539 25.930 -5.692 2.851 -3.110 0.575 C9 ONV 9
ONV C10 C10 C 0 1 Y N N N N N 14.902 29.448 -5.690 -0.628 -2.282 -0.023 C10 ONV 10
ONV C11 C11 C 0 1 Y N N N N N 15.305 28.328 -5.002 0.299 -3.254 0.188 C11 ONV 11
ONV C12 C12 C 0 1 N N N N N N 14.842 30.791 -5.147 -2.065 -2.506 -0.230 C12 ONV 12
ONV C13 C13 C 0 1 N N S N N N 15.380 32.262 -3.305 -4.322 -1.680 -0.636 C13 ONV 13
ONV C14 C14 C 0 1 Y N N N N N 14.073 32.375 -2.579 -5.086 -0.447 -0.230 C14 ONV 14
ONV C15 C15 C 0 1 Y N N N N N 13.631 31.261 -1.845 -6.285 -0.572 0.449 C15 ONV 15
ONV C16 C16 C 0 1 Y N N N N N 12.443 31.300 -1.148 -6.990 0.553 0.824 C16 ONV 16
ONV C17 C17 C 0 1 Y N N N N N 11.648 32.446 -1.102 -6.490 1.821 0.516 C17 ONV 17
ONV O5 O1 O 0 1 N N N N N N 9.422 33.120 -0.860 -8.292 2.923 1.511 O5 ONV 18
ONV C20 C18 C 0 1 N N N N N N 10.336 32.450 -0.281 -7.239 3.030 0.915 C20 ONV 19
ONV O4 O2 O 0 1 N N N N N N 10.163 31.855 0.905 -6.754 4.251 0.617 O4 ONV 20
ONV C18 C19 C 0 1 Y N N N N N 12.071 33.571 -1.868 -5.279 1.939 -0.169 C18 ONV 21
ONV C19 C20 C 0 1 Y N N N N N 13.255 33.519 -2.620 -4.582 0.806 -0.533 C19 ONV 22
ONV C21 C21 C 0 1 N N N N N N 16.452 32.253 -2.225 -4.583 -1.979 -2.114 C21 ONV 23
ONV O6 O3 O 0 1 N N N N N N 17.752 32.252 -2.818 -4.263 -0.827 -2.896 O6 ONV 24
ONV N2 N1 N 0 1 N N N N N N 15.438 30.980 -4.009 -2.889 -1.457 -0.429 N2 ONV 25
ONV O3 O4 O 0 1 N N N N N N 14.339 31.663 -5.845 -2.512 -3.637 -0.222 O3 ONV 26
ONV CL CL1 CL 0 0 N N N N N N 15.703 23.389 -6.761 5.496 -2.844 0.970 CL ONV 27
ONV N11 N2 N 0 1 Y N N N N N 14.623 29.153 -6.973 -0.002 -1.049 -0.009 N11 ONV 28
ONV O2 O5 O 0 1 N N N N N N 14.759 25.021 -9.138 4.738 -0.010 0.664 O2 ONV 29
ONV N N3 N 0 1 N N N N N N 15.425 22.929 -12.540 6.235 4.142 -0.563 N ONV 30
ONV O1 O6 O 0 1 N N N N N N 17.091 24.009 -11.446 6.643 1.936 -0.448 O1 ONV 31
ONV C C22 C 0 1 N N N N N N 16.727 22.897 -12.310 6.865 3.087 -1.098 C ONV 32
ONV O O7 O 0 1 N N N N N N 17.561 22.116 -12.771 7.573 3.167 -2.082 O ONV 33
ONV H1 H1 H 0 1 N N N N N N 15.933 25.744 -11.129 6.248 1.929 1.618 H1 ONV 34
ONV H2 H2 H 0 1 N N N N N N 14.631 24.870 -12.942 4.404 3.877 0.465 H2 ONV 35
ONV H3 H3 H 0 1 N N N N N N 13.825 23.987 -11.601 5.822 4.193 1.514 H3 ONV 36
ONV H4 H4 H 0 1 N N N N N N 15.055 23.116 -9.853 3.749 1.691 1.294 H4 ONV 37
ONV H5 H5 H 0 1 N N N N N N 16.511 23.948 -9.208 4.031 1.572 -0.460 H5 ONV 38
ONV H6 H6 H 0 1 N N N N N N 14.462 27.397 -9.112 2.266 0.700 0.225 H6 ONV 39
ONV H7 H7 H 0 1 N N N N N N 15.881 25.532 -4.748 3.021 -4.172 0.674 H7 ONV 40
ONV H8 H8 H 0 1 N N N N N N 15.636 28.295 -3.974 0.108 -4.316 0.231 H8 ONV 41
ONV H9 H9 H 0 1 N N N N N N 15.526 33.109 -3.992 -4.649 -2.526 -0.031 H9 ONV 42
ONV H10 H10 H 0 1 N N N N N N 14.230 30.363 -1.827 -6.671 -1.553 0.685 H10 ONV 43
ONV H11 H11 H 0 1 N N N N N N 12.117 30.416 -0.621 -7.926 0.454 1.353 H11 ONV 44
ONV H12 H12 H 0 1 N N N N N N 9.280 32.018 1.216 -7.280 5.012 0.899 H12 ONV 45
ONV H13 H13 H 0 1 N N N N N N 11.475 34.472 -1.870 -4.888 2.917 -0.410 H13 ONV 46
ONV H14 H14 H 0 1 N N N N N N 13.540 34.361 -3.233 -3.643 0.897 -1.058 H14 ONV 47
ONV H15 H15 H 0 1 N N N N N N 16.341 33.148 -1.596 -3.963 -2.817 -2.431 H15 ONV 48
ONV H16 H16 H 0 1 N N N N N N 16.335 31.352 -1.605 -5.634 -2.232 -2.253 H16 ONV 49
ONV H17 H17 H 0 1 N N N N N N 18.412 32.246 -2.135 -4.405 -0.945 -3.846 H17 ONV 50
ONV H18 H18 H 0 1 N N N N N N 15.953 30.226 -3.601 -2.532 -0.555 -0.436 H18 ONV 51
ONV H19 H19 H 0 1 N N N N N N 14.331 29.781 -7.694 -0.439 -0.192 -0.136 H19 ONV 52
ONV H20 H20 H 0 1 N N N N N N 14.926 22.176 -12.969 6.277 5.052 -0.896 H20 ONV 53
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ONV O C DOUB N N 1
ONV N C SING N N 2
ONV N C2 SING N N 3
ONV C O1 SING N N 4
ONV C2 C1 SING N N 5
ONV O1 C1 SING N N 6
ONV C1 C3 SING N N 7
ONV C3 O2 SING N N 8
ONV O2 C4 SING N N 9
ONV C6 C4 DOUB Y N 10
ONV C6 C7 SING Y N 11
ONV C4 C5 SING Y N 12
ONV C7 N11 SING Y N 13
ONV C7 C8 DOUB Y N 14
ONV N11 C10 SING Y N 15
ONV C5 CL SING N N 16
ONV C5 C9 DOUB Y N 17
ONV C8 C9 SING Y N 18
ONV C8 C11 SING Y N 19
ONV O3 C12 DOUB N N 20
ONV C10 C12 SING N N 21
ONV C10 C11 DOUB Y N 22
ONV C12 N2 SING N N 23
ONV N2 C13 SING N N 24
ONV C13 C14 SING N N 25
ONV C13 C21 SING N N 26
ONV O6 C21 SING N N 27
ONV C19 C14 DOUB Y N 28
ONV C19 C18 SING Y N 29
ONV C14 C15 SING Y N 30
ONV C18 C17 DOUB Y N 31
ONV C15 C16 DOUB Y N 32
ONV C16 C17 SING Y N 33
ONV C17 C20 SING N N 34
ONV O5 C20 DOUB N N 35
ONV C20 O4 SING N N 36
ONV C1 H1 SING N N 37
ONV C2 H2 SING N N 38
ONV C2 H3 SING N N 39
ONV C3 H4 SING N N 40
ONV C3 H5 SING N N 41
ONV C6 H6 SING N N 42
ONV C9 H7 SING N N 43
ONV C11 H8 SING N N 44
ONV C13 H9 SING N N 45
ONV C15 H10 SING N N 46
ONV C16 H11 SING N N 47
ONV O4 H12 SING N N 48
ONV C18 H13 SING N N 49
ONV C19 H14 SING N N 50
ONV C21 H15 SING N N 51
ONV C21 H16 SING N N 52
ONV O6 H17 SING N N 53
ONV N2 H18 SING N N 54
ONV N11 H19 SING N N 55
ONV N H20 SING N N 56
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
ONV SMILES ACDLabs 12.01 C4(COc1c(Cl)cc3c(c1)nc(C(NC(c2ccc(C(=O)O)cc2)CO)=O)c3)CNC(O4)=O
ONV InChI InChI 1.03 InChI=1S/C22H20ClN3O7/c23-15-5-13-6-17(25-16(13)7-19(15)32-10-14-8-24-22(31)33-14)20(28)26-18(9-27)11-1-3-12(4-2-11)21(29)30/h1-7,14,18,25,27H,8-10H2,(H,24,31)(H,26,28)(H,29,30)/t14-,18+/m0/s1
ONV InChIKey InChI 1.03 HSLVBDMYOQHSSR-KBXCAEBGSA-N
ONV SMILES_CANONICAL CACTVS 3.385 OC[C@@H](NC(=O)c1[nH]c2cc(OC[C@@H]3CNC(=O)O3)c(Cl)cc2c1)c4ccc(cc4)C(O)=O
ONV SMILES CACTVS 3.385 OC[CH](NC(=O)c1[nH]c2cc(OC[CH]3CNC(=O)O3)c(Cl)cc2c1)c4ccc(cc4)C(O)=O
ONV SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 c1cc(ccc1[C@@H](CO)NC(=O)c2cc3cc(c(cc3[nH]2)OC[C@@H]4CNC(=O)O4)Cl)C(=O)O
ONV SMILES "OpenEye OEToolkits" 2.0.7 c1cc(ccc1C(CO)NC(=O)c2cc3cc(c(cc3[nH]2)OCC4CNC(=O)O4)Cl)C(=O)O
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
ONV "SYSTEMATIC NAME" ACDLabs 12.01 "4-{(1S)-1-[(5-chloro-6-{[(5S)-2-oxo-1,3-oxazolidin-5-yl]methoxy}-1H-indole-2-carbonyl)amino]-2-hydroxyethyl}benzoic acid"
ONV "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "4-[(1~{S})-1-[[5-chloranyl-6-[[(5~{S})-2-oxidanylidene-1,3-oxazolidin-5-yl]methoxy]-1~{H}-indol-2-yl]carbonylamino]-2-oxidanyl-ethyl]benzoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
ONV 'Create component' 2019-07-01 RCSB
ONV 'Initial release' 2019-07-24 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
ONV C1 C 6.299 -4.185 1
ONV C2 C 4.928 -3.575 2
ONV C3 C 7.598 -3.435 3
ONV C4 C 8.897 -1.185 4
ONV C5 C 8.897 0.315 5
ONV C6 C 10.196 -1.935 6
ONV C7 C 11.495 -1.185 7
ONV C8 C 11.495 0.315 8
ONV C9 C 10.196 1.065 9
ONV C10 C 13.790 -0.435 10
ONV C11 C 12.914 0.772 11
ONV C12 C 15.290 -0.435 12
ONV C13 C 17.540 0.864 13
ONV C14 C 18.290 2.163 14
ONV C15 C 17.540 3.462 15
ONV C16 C 18.290 4.761 16
ONV C17 C 19.790 4.761 17
ONV O5 O 22.040 6.060 18
ONV C20 C 20.540 6.060 19
ONV O4 O 19.790 7.359 20
ONV C18 C 20.540 3.462 21
ONV C19 C 19.790 2.163 22
ONV C21 C 18.290 -0.435 23
ONV O6 O 19.790 -0.435 24
ONV N2 N 16.040 0.864 25
ONV O3 O 16.040 -1.734 26
ONV CL Cl 7.598 1.065 27
ONV N11 N 12.914 -1.642 28
ONV O2 O 7.598 -1.935 29
ONV N N 3.925 -4.690 30
ONV O1 O 6.142 -5.677 31
ONV C C 4.675 -5.989 32
ONV O O 4.065 -7.359 33
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
ONV O C DOUBLE NONE 1
ONV N C SINGLE NONE 2
ONV N C2 SINGLE NONE 3
ONV C O1 SINGLE NONE 4
ONV C2 C1 SINGLE NONE 5
ONV O1 C1 SINGLE NONE 6
ONV C1 C3 SINGLE BEGINWEDGE 7
ONV C3 O2 SINGLE NONE 8
ONV O2 C4 SINGLE NONE 9
ONV C6 C4 SINGLE NONE 10
ONV C6 C7 DOUBLE NONE 11
ONV C4 C5 DOUBLE NONE 12
ONV C7 N11 SINGLE NONE 13
ONV C7 C8 SINGLE NONE 14
ONV N11 C10 SINGLE NONE 15
ONV C5 CL SINGLE NONE 16
ONV C5 C9 SINGLE NONE 17
ONV C8 C9 DOUBLE NONE 18
ONV C8 C11 SINGLE NONE 19
ONV O3 C12 DOUBLE NONE 20
ONV C10 C12 SINGLE NONE 21
ONV C10 C11 DOUBLE NONE 22
ONV C12 N2 SINGLE NONE 23
ONV N2 C13 SINGLE NONE 24
ONV C13 C14 SINGLE NONE 25
ONV C13 C21 SINGLE BEGINWEDGE 26
ONV O6 C21 SINGLE NONE 27
ONV C19 C14 SINGLE NONE 28
ONV C19 C18 DOUBLE NONE 29
ONV C14 C15 DOUBLE NONE 30
ONV C18 C17 SINGLE NONE 31
ONV C15 C16 SINGLE NONE 32
ONV C16 C17 DOUBLE NONE 33
ONV C17 C20 SINGLE NONE 34
ONV O5 C20 DOUBLE NONE 35
ONV C20 O4 SINGLE NONE 36
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
ONV MurckoScaffold S1 scaffold 'O=C1NC[C@@H](COc2ccc3cc(C(=O)NCc4ccccc4)[nH]c3c2)O1' InChI=1S/C20H19N3O4/c24-19(21-10-13-4-2-1-3-5-13)18-8-14-6-7-15(9-17(14)23-18)26-12-16-11-22-20(25)27-16/h1-9,16,23H,10-12H2,(H,21,24)(H,22,25)/t16-/m0/s1 VYJUKBXFOXPCOT-INIZCTEOSA-N
ONV amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
ONV indole F2 fragment 'c1ccc2[nH]ccc2c1' InChI=1S/C8H7N/c1-2-4-8-7(3-1)5-6-9-8/h1-6,9H SIKJAQJRHWYJAI-UHFFFAOYSA-N
ONV phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
ONV pyrrole F4 fragment 'c1cc[nH]c1' InChI=1S/C4H5N/c1-2-4-5-3-1/h1-5H KAESVJOAVNADME-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
ONV C1 S1 1
ONV C2 S1 1
ONV C3 S1 1
ONV C4 S1 1
ONV C5 S1 1
ONV C6 S1 1
ONV C7 S1 1
ONV C8 S1 1
ONV C9 S1 1
ONV C10 S1 1
ONV C11 S1 1
ONV C12 S1 1
ONV C13 S1 1
ONV C14 S1 1
ONV C15 S1 1
ONV C16 S1 1
ONV C17 S1 1
ONV C18 S1 1
ONV C19 S1 1
ONV N2 S1 1
ONV O3 S1 1
ONV N11 S1 1
ONV O2 S1 1
ONV N S1 1
ONV O1 S1 1
ONV C S1 1
ONV O S1 1
ONV N2 F1 1
ONV C12 F1 1
ONV O3 F1 1
ONV C10 F1 1
ONV C7 F2 1
ONV C8 F2 1
ONV C11 F2 1
ONV C10 F2 1
ONV N11 F2 1
ONV C9 F2 1
ONV C5 F2 1
ONV C4 F2 1
ONV C6 F2 1
ONV C4 F3 1
ONV C6 F3 1
ONV C7 F3 1
ONV C8 F3 1
ONV C9 F3 1
ONV C5 F3 1
ONV C14 F3 2
ONV C19 F3 2
ONV C18 F3 2
ONV C17 F3 2
ONV C16 F3 2
ONV C15 F3 2
ONV C7 F4 1
ONV C8 F4 1
ONV C11 F4 1
ONV C10 F4 1
ONV N11 F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id ONV
_pdbe_chem_comp_rdkit_properties.exactmw 473.099
_pdbe_chem_comp_rdkit_properties.amw 473.869
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 10
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 5
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 9
_pdbe_chem_comp_rdkit_properties.NumHBD 5
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 33
_pdbe_chem_comp_rdkit_properties.NumAtoms 53
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 11
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.227
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 2
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 220.443
_pdbe_chem_comp_rdkit_properties.tpsa 149.980
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.415
_pdbe_chem_comp_rdkit_properties.CrippenMR 114.156
_pdbe_chem_comp_rdkit_properties.chi0v 16.333
_pdbe_chem_comp_rdkit_properties.chi1v 8.746
_pdbe_chem_comp_rdkit_properties.chi2v 3.898
_pdbe_chem_comp_rdkit_properties.chi3v 3.898
_pdbe_chem_comp_rdkit_properties.chi4v 2.423
_pdbe_chem_comp_rdkit_properties.chi0n 35.577
_pdbe_chem_comp_rdkit_properties.chi1n 18.026
_pdbe_chem_comp_rdkit_properties.chi2n 3.632
_pdbe_chem_comp_rdkit_properties.chi3n 3.632
_pdbe_chem_comp_rdkit_properties.chi4n 2.242
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.760
_pdbe_chem_comp_rdkit_properties.kappa1 8.545
_pdbe_chem_comp_rdkit_properties.kappa2 9.390
_pdbe_chem_comp_rdkit_properties.kappa3 5.019
_pdbe_chem_comp_rdkit_properties.Phi 2.431
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
ONV UniChem ChEMBL CHEMBL4554985
ONV UniChem PDBe ONV
ONV UniChem PubChem 138753630
ONV UniChem BindingDb 50512575
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
ONV C1 -5.842 1.266 -0.447 ETKDGv3 1
ONV C2 -6.467 1.761 0.891 ETKDGv3 2
ONV C3 -6.098 -0.225 -0.702 ETKDGv3 3
ONV C4 -4.139 -1.282 0.465 ETKDGv3 4
ONV C5 -3.709 -1.945 1.571 ETKDGv3 5
ONV C6 -3.141 -0.850 -0.569 ETKDGv3 6
ONV C7 -1.858 -1.135 -0.349 ETKDGv3 7
ONV C8 -1.416 -1.832 0.823 ETKDGv3 8
ONV C9 -2.262 -2.238 1.767 ETKDGv3 9
ONV C10 0.388 -1.366 -0.454 ETKDGv3 10
ONV C11 0.031 -1.950 0.705 ETKDGv3 11
ONV C12 1.769 -1.240 -0.961 ETKDGv3 12
ONV C13 4.262 -1.650 -0.721 ETKDGv3 13
ONV C14 4.684 -0.269 -0.268 ETKDGv3 14
ONV C15 5.315 0.567 -1.111 ETKDGv3 15
ONV C16 5.739 1.908 -0.658 ETKDGv3 16
ONV C17 5.508 2.308 0.607 ETKDGv3 17
ONV O5 6.509 4.449 0.295 ETKDGv3 18
ONV C20 5.926 3.648 1.075 ETKDGv3 19
ONV O4 5.676 4.036 2.388 ETKDGv3 20
ONV C18 4.824 1.379 1.541 ETKDGv3 21
ONV C19 4.439 0.165 1.130 ETKDGv3 22
ONV C21 5.208 -2.708 -0.130 ETKDGv3 23
ONV O6 4.938 -3.970 -0.680 ETKDGv3 24
ONV N2 2.872 -1.903 -0.320 ETKDGv3 25
ONV O3 1.975 -0.534 -1.985 ETKDGv3 26
ONV CL -4.848 -2.466 2.803 ETKDGv3 27
ONV N11 -0.741 -0.832 -1.165 ETKDGv3 28
ONV O2 -5.512 -1.026 0.323 ETKDGv3 29
ONV N -7.378 2.830 0.513 ETKDGv3 30
ONV O1 -6.465 2.045 -1.464 ETKDGv3 31
ONV C -7.334 2.941 -0.889 ETKDGv3 32
ONV O -8.020 3.768 -1.544 ETKDGv3 33
ONV H1 -4.751 1.478 -0.453 ETKDGv3 34
ONV H2 -7.033 0.962 1.417 ETKDGv3 35
ONV H3 -5.681 2.161 1.566 ETKDGv3 36
ONV H4 -7.193 -0.408 -0.708 ETKDGv3 37
ONV H5 -5.713 -0.525 -1.700 ETKDGv3 38
ONV H6 -3.430 -0.327 -1.469 ETKDGv3 39
ONV H7 -1.908 -2.762 2.646 ETKDGv3 40
ONV H8 0.685 -2.406 1.434 ETKDGv3 41
ONV H9 4.329 -1.730 -1.830 ETKDGv3 42
ONV H10 5.522 0.273 -2.132 ETKDGv3 43
ONV H11 6.237 2.557 -1.367 ETKDGv3 44
ONV H12 5.956 4.950 2.723 ETKDGv3 45
ONV H13 4.633 1.675 2.565 ETKDGv3 46
ONV H14 3.944 -0.501 1.826 ETKDGv3 47
ONV H15 5.128 -2.735 0.982 ETKDGv3 48
ONV H16 6.257 -2.442 -0.382 ETKDGv3 49
ONV H17 4.210 -4.372 -0.138 ETKDGv3 50
ONV H18 2.687 -2.566 0.464 ETKDGv3 51
ONV H19 -0.742 -0.328 -2.080 ETKDGv3 52
ONV H20 -7.968 3.398 1.161 ETKDGv3 53
#