data_P2P
#
_chem_comp.id P2P
_chem_comp.name "N7-(5'-PHOSPHO-ALPHA-RIBOSYL)-2-HYDROXYPURINE"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C10 H13 N4 O8 P"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms
"PHOSPHORIC ACID MONO-[3,4-DIHYDROXY-5-(5-HYDROXY-BENZOIMIDAZOL-1-YL)TETRAHYDRO-FURAN-2-YLMETHYL] ESTER"
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2001-07-10
_chem_comp.pdbx_modified_date 2020-06-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 348.206
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code P2P
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1JHR
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
P2P P P P 0 1 N N N N N N 59.254 39.341 6.091 -0.668 -0.108 -4.849 P P2P 1
P2P O1P O1P O 0 1 N N N N N N 59.092 38.085 5.307 0.242 -1.186 -5.293 O1P P2P 2
P2P O2P O2P O 0 1 N N N N N N 59.541 40.484 5.170 -2.140 -0.369 -5.448 O2P P2P 3
P2P O3P O3P O 0 1 N N N N N N 60.392 39.194 7.036 -0.118 1.310 -5.377 O3P P2P 4
P2P "O6'" O6* O 0 1 N N N N N N 57.926 39.607 6.947 -0.738 -0.091 -3.241 "O6'" P2P 5
P2P "C5'" C5* C 0 1 N N N N N N 57.413 38.584 7.841 0.591 0.142 -2.772 "C5'" P2P 6
P2P "C4'" C4* C 0 1 N N R N N N 57.861 38.909 9.251 0.595 0.170 -1.243 "C4'" P2P 7
P2P "O5'" O5* O 0 1 N N N N N N 57.436 40.272 9.592 0.157 -1.103 -0.715 "O5'" P2P 8
P2P "C3'" C3* C 0 1 N N S N N N 57.301 38.030 10.350 2.032 0.344 -0.705 "C3'" P2P 9
P2P "O3'" O3* O 0 1 N N N N N N 58.107 38.008 11.545 2.278 1.711 -0.367 "O3'" P2P 10
P2P "C2'" C2* C 0 1 N N R N N N 55.976 38.758 10.582 2.073 -0.541 0.559 "C2'" P2P 11
P2P "O2'" O2* O 0 1 N N N N N N 55.480 38.363 11.875 2.349 0.250 1.717 "O2'" P2P 12
P2P "C1'" C1* C 0 1 N N S N N N 56.326 40.246 10.534 0.654 -1.147 0.639 "C1'" P2P 13
P2P C8 C8 C 0 1 Y N N N N N 55.833 40.759 13.012 -1.099 0.585 1.139 C8 P2P 14
P2P N9 N9 N 0 1 Y N N N N N 56.324 41.450 14.078 -1.677 1.109 2.183 N9 P2P 15
P2P C4 C4 C 0 1 Y N N N N N 57.483 42.051 13.625 -1.182 0.554 3.305 C4 P2P 16
P2P C5 C5 C 0 1 Y N N N N N 57.645 41.647 12.304 -0.223 -0.394 2.901 C5 P2P 17
P2P N7 N7 N 0 1 Y N N N N N 56.591 40.854 11.895 -0.194 -0.342 1.522 N7 P2P 18
P2P N3 N3 N 0 1 Y N N N N N 58.300 42.859 14.335 -1.413 0.716 4.609 N3 P2P 19
P2P C2 C2 C 0 1 Y N N N N N 59.368 43.244 13.597 -0.748 0.001 5.498 C2 P2P 20
P2P N1 N1 N 0 1 Y N N N N N 59.639 42.906 12.285 0.163 -0.893 5.147 N1 P2P 21
P2P C6 C6 C 0 1 Y N N N N N 58.790 42.089 11.602 0.452 -1.115 3.873 C6 P2P 22
P2P O11 O11 O 0 1 N N N N N N 60.263 44.077 14.211 -1.006 0.190 6.815 O11 P2P 23
P2P HOP2 2HOP H 0 0 N N N N N N 59.644 41.285 5.670 -2.054 -0.371 -6.411 HOP2 P2P 24
P2P HOP3 3HOP H 0 0 N N N N N N 60.495 39.995 7.536 -0.739 1.983 -5.067 HOP3 P2P 25
P2P "H5'1" 1H5* H 0 0 N N N N N N 56.307 38.460 7.760 0.947 1.099 -3.154 "H5'1" P2P 26
P2P "H5'2" 2H5* H 0 0 N N N N N N 57.704 37.555 7.525 1.245 -0.654 -3.123 "H5'2" P2P 27
P2P "H4'" H4* H 0 1 N N N N N N 58.964 38.754 9.219 -0.045 0.973 -0.877 "H4'" P2P 28
P2P "H3'" H3* H 0 1 N N N N N N 57.236 36.948 10.085 2.759 -0.003 -1.438 "H3'" P2P 29
P2P "HO3'" *HO3 H 0 0 N N N N N N 57.755 37.456 12.234 3.176 1.753 -0.010 "HO3'" P2P 30
P2P "H2'" H2* H 0 1 N N N N N N 55.186 38.523 9.830 2.819 -1.329 0.450 "H2'" P2P 31
P2P "HO2'" *HO2 H 0 0 N N N N N N 54.657 38.815 12.019 3.219 0.648 1.582 "HO2'" P2P 32
P2P "H1'" H1* H 0 1 N N N N N N 55.488 40.900 10.198 0.700 -2.176 0.994 "H1'" P2P 33
P2P H8 H8 H 0 1 N N N N N N 54.900 40.171 13.050 -1.312 0.854 0.115 H8 P2P 34
P2P H6 H6 H 0 1 N N N N N N 59.012 41.806 10.559 1.197 -1.847 3.598 H6 P2P 35
P2P HO11 HO11 H 0 0 N N N N N N 61.012 44.347 13.693 -1.714 -0.424 7.051 HO11 P2P 36
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
P2P P O1P DOUB N N 1
P2P P O2P SING N N 2
P2P P O3P SING N N 3
P2P P "O6'" SING N N 4
P2P O2P HOP2 SING N N 5
P2P O3P HOP3 SING N N 6
P2P "O6'" "C5'" SING N N 7
P2P "C5'" "C4'" SING N N 8
P2P "C5'" "H5'1" SING N N 9
P2P "C5'" "H5'2" SING N N 10
P2P "C4'" "O5'" SING N N 11
P2P "C4'" "C3'" SING N N 12
P2P "C4'" "H4'" SING N N 13
P2P "O5'" "C1'" SING N N 14
P2P "C3'" "O3'" SING N N 15
P2P "C3'" "C2'" SING N N 16
P2P "C3'" "H3'" SING N N 17
P2P "O3'" "HO3'" SING N N 18
P2P "C2'" "O2'" SING N N 19
P2P "C2'" "C1'" SING N N 20
P2P "C2'" "H2'" SING N N 21
P2P "O2'" "HO2'" SING N N 22
P2P "C1'" N7 SING N N 23
P2P "C1'" "H1'" SING N N 24
P2P C8 N9 DOUB Y N 25
P2P C8 N7 SING Y N 26
P2P C8 H8 SING N N 27
P2P N9 C4 SING Y N 28
P2P C4 C5 DOUB Y N 29
P2P C4 N3 SING Y N 30
P2P C5 N7 SING Y N 31
P2P C5 C6 SING Y N 32
P2P N3 C2 DOUB Y N 33
P2P C2 N1 SING Y N 34
P2P C2 O11 SING N N 35
P2P N1 C6 DOUB Y N 36
P2P C6 H6 SING N N 37
P2P O11 HO11 SING N N 38
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
P2P SMILES ACDLabs 10.04 O=P(O)(O)OCC3OC(n2cnc1nc(O)ncc12)C(O)C3O
P2P SMILES_CANONICAL CACTVS 3.341 O[C@H]1[C@@H](O)[C@H](O[C@@H]1CO[P](O)(O)=O)n2cnc3nc(O)ncc23
P2P SMILES CACTVS 3.341 O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(O)=O)n2cnc3nc(O)ncc23
P2P SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 c1c2c(ncn2[C@@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O)nc(n1)O
P2P SMILES "OpenEye OEToolkits" 1.5.0 c1c2c(ncn2C3C(C(C(O3)COP(=O)(O)O)O)O)nc(n1)O
P2P InChI InChI 1.03 InChI=1S/C10H13N4O8P/c15-6-5(2-21-23(18,19)20)22-9(7(6)16)14-3-12-8-4(14)1-11-10(17)13-8/h1,3,5-7,9,15-16H,2H2,(H,11,13,17)(H2,18,19,20)/t5-,6-,7-,9+/m1/s1
P2P InChIKey InChI 1.03 BVZASCINAVSQNO-PULFBKJNSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
P2P "SYSTEMATIC NAME" ACDLabs 10.04 7-(5-O-phosphono-alpha-D-ribofuranosyl)-7H-purin-2-ol
P2P "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3S,4R,5S)-3,4-dihydroxy-5-(2-hydroxypurin-7-yl)oxolan-2-yl]methyl dihydrogen phosphate"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
P2P 'Create component' 2001-07-10 RCSB
P2P 'Modify descriptor' 2011-06-04 RCSB
P2P 'Modify synonyms' 2020-06-05 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id P2P
_pdbx_chem_comp_synonyms.name
"PHOSPHORIC ACID MONO-[3,4-DIHYDROXY-5-(5-HYDROXY-BENZOIMIDAZOL-1-YL)TETRAHYDRO-FURAN-2-YLMETHYL] ESTER"
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_drugbank_details.comp_id P2P
_pdbe_chem_comp_drugbank_details.drugbank_id DB02905
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name "N7-(5'-Phospho-alpha-ribosyl)-2-hydroxypurine"
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number ?
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
_pdbe_chem_comp_synonyms.comp_id P2P
_pdbe_chem_comp_synonyms.name
'PHOSPHORIC ACID MONO-[3,4-DIHYDROXY-5-(5-HYDROXY-BENZOIMIDAZOL-1-YL)TETRAHYDRO-FURAN-2-YLMETHYL] ESTER'
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_drugbank_classification.comp_id P2P
_pdbe_chem_comp_drugbank_classification.drugbank_id DB02905
_pdbe_chem_comp_drugbank_classification.parent 'Purine ribonucleoside monophosphates'
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Purine nucleotides'
_pdbe_chem_comp_drugbank_classification.superclass 'Nucleosides, nucleotides, and analogues'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as purine ribonucleoside monophosphates. These are nucleotides consisting of a purine base linked to a ribose to which one monophosphate group is attached.'
#
_pdbe_chem_comp_drugbank_targets.comp_id P2P
_pdbe_chem_comp_drugbank_targets.drugbank_id DB02905
_pdbe_chem_comp_drugbank_targets.name 'Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase'
_pdbe_chem_comp_drugbank_targets.organism 'Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)'
_pdbe_chem_comp_drugbank_targets.uniprot_id Q05603
_pdbe_chem_comp_drugbank_targets.pharmacologically_active unknown
_pdbe_chem_comp_drugbank_targets.ordinal 1
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
P2P P P 8.870 4.670 1
P2P O1P O 8.409 6.098 2
P2P O2P O 10.297 5.131 3
P2P O3P O 7.443 4.209 4
P2P "O6'" O 9.331 3.243 5
P2P "C5'" C 8.326 2.130 6
P2P "C4'" C 8.787 0.702 7
P2P "O5'" O 7.903 -0.510 8
P2P "C3'" C 10.213 0.236 9
P2P "O3'" O 11.428 1.116 10
P2P "C2'" C 10.210 -1.264 11
P2P "O2'" O 11.422 -2.147 12
P2P "C1'" C 8.783 -1.725 13
P2P C8 C 9.192 -4.357 14
P2P N9 N 8.316 -5.565 15
P2P C4 C 6.897 -5.107 16
P2P C5 C 6.897 -3.607 17
P2P N7 N 8.316 -3.150 18
P2P N3 N 5.598 -5.857 19
P2P C2 C 4.299 -5.107 20
P2P N1 N 4.299 -3.607 21
P2P C6 C 5.598 -2.857 22
P2P O11 O 3.000 -5.857 23
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
P2P P O1P DOUBLE NONE 1
P2P P O2P SINGLE NONE 2
P2P P O3P SINGLE NONE 3
P2P P "O6'" SINGLE NONE 4
P2P "O6'" "C5'" SINGLE NONE 5
P2P "C4'" "C5'" SINGLE BEGINDASH 6
P2P "C4'" "O5'" SINGLE NONE 7
P2P "C4'" "C3'" SINGLE NONE 8
P2P "O5'" "C1'" SINGLE NONE 9
P2P "C3'" "O3'" SINGLE BEGINWEDGE 10
P2P "C3'" "C2'" SINGLE NONE 11
P2P "C2'" "O2'" SINGLE BEGINWEDGE 12
P2P "C2'" "C1'" SINGLE NONE 13
P2P "C1'" N7 SINGLE BEGINWEDGE 14
P2P C8 N9 DOUBLE NONE 15
P2P C8 N7 SINGLE NONE 16
P2P N9 C4 SINGLE NONE 17
P2P C4 C5 DOUBLE NONE 18
P2P C4 N3 SINGLE NONE 19
P2P C5 N7 SINGLE NONE 20
P2P C5 C6 SINGLE NONE 21
P2P N3 C2 DOUBLE NONE 22
P2P C2 N1 SINGLE NONE 23
P2P C2 O11 SINGLE NONE 24
P2P N1 C6 DOUBLE NONE 25
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
P2P MurckoScaffold S1 scaffold 'c1ncc2c(n1)ncn2[C@@H]1CCCO1' InChI=1S/C9H10N4O/c1-2-8(14-3-1)13-6-12-9-7(13)4-10-5-11-9/h4-6,8H,1-3H2/t8-/m0/s1 PPCQYBCBHJVVJM-QMMMGPOBSA-N
P2P imidazole F1 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
P2P phosphate F2 fragment O=P(O)(O)O InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4) NBIIXXVUZAFLBC-UHFFFAOYSA-N
P2P purine F3 fragment 'c1ncc2[nH]cnc2n1' InChI=1S/C5H4N4/c1-4-5(8-2-6-1)9-3-7-4/h1-3H,(H,6,7,8,9) KDCGOANMDULRCW-UHFFFAOYSA-N
P2P pyrimidine F4 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
P2P ribose F5 fragment OCC1OCC(O)C1O InChI=1S/C5H10O4/c6-1-4-5(8)3(7)2-9-4/h3-8H,1-2H2 KZVAAIRBJJYZOW-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
P2P "C4'" S1 1
P2P "O5'" S1 1
P2P "C3'" S1 1
P2P "C2'" S1 1
P2P "C1'" S1 1
P2P C8 S1 1
P2P N9 S1 1
P2P C4 S1 1
P2P C5 S1 1
P2P N7 S1 1
P2P N3 S1 1
P2P C2 S1 1
P2P N1 S1 1
P2P C6 S1 1
P2P C4 F1 1
P2P C5 F1 1
P2P N7 F1 1
P2P C8 F1 1
P2P N9 F1 1
P2P O2P F2 1
P2P P F2 1
P2P O1P F2 1
P2P O3P F2 1
P2P "O6'" F2 1
P2P N7 F3 1
P2P C8 F3 1
P2P N9 F3 1
P2P C4 F3 1
P2P C5 F3 1
P2P C6 F3 1
P2P N1 F3 1
P2P C2 F3 1
P2P N3 F3 1
P2P C5 F4 1
P2P C4 F4 1
P2P N3 F4 1
P2P C2 F4 1
P2P N1 F4 1
P2P C6 F4 1
P2P "C2'" F5 1
P2P "C3'" F5 1
P2P "C4'" F5 1
P2P "O5'" F5 1
P2P "C1'" F5 1
P2P "C5'" F5 1
P2P "O6'" F5 1
P2P "O3'" F5 1
P2P "O2'" F5 1
#
_pdbe_chem_comp_rdkit_properties.comp_id P2P
_pdbe_chem_comp_rdkit_properties.exactmw 348.047
_pdbe_chem_comp_rdkit_properties.amw 348.208
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 12
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 5
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 9
_pdbe_chem_comp_rdkit_properties.NumHBD 5
_pdbe_chem_comp_rdkit_properties.NumHBA 12
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 23
_pdbe_chem_comp_rdkit_properties.NumAtoms 36
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 13
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.500
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 4
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 146.456
_pdbe_chem_comp_rdkit_properties.tpsa 180.280
_pdbe_chem_comp_rdkit_properties.CrippenClogP -2.630
_pdbe_chem_comp_rdkit_properties.CrippenMR 68.092
_pdbe_chem_comp_rdkit_properties.chi0v 11.396
_pdbe_chem_comp_rdkit_properties.chi1v 6.928
_pdbe_chem_comp_rdkit_properties.chi2v 2.724
_pdbe_chem_comp_rdkit_properties.chi3v 2.724
_pdbe_chem_comp_rdkit_properties.chi4v 1.738
_pdbe_chem_comp_rdkit_properties.chi0n 23.502
_pdbe_chem_comp_rdkit_properties.chi1n 11.509
_pdbe_chem_comp_rdkit_properties.chi2n 2.409
_pdbe_chem_comp_rdkit_properties.chi3n 2.409
_pdbe_chem_comp_rdkit_properties.chi4n 1.543
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.660
_pdbe_chem_comp_rdkit_properties.kappa1 6.685
_pdbe_chem_comp_rdkit_properties.kappa2 5.761
_pdbe_chem_comp_rdkit_properties.kappa3 3.186
_pdbe_chem_comp_rdkit_properties.Phi 1.675
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
P2P UniChem DrugBank DB02905
P2P UniChem PDBe P2P
P2P UniChem ZINC ZINC000012502817
P2P UniChem PubChem 446493
P2P UniChem 'Probes And Drugs' PD059761
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
P2P P 3.590 -1.100 2.242 ETKDGv3 1
P2P O1P 3.338 -2.585 2.371 ETKDGv3 2
P2P O2P 3.487 -0.391 3.774 ETKDGv3 3
P2P O3P 5.143 -0.844 1.616 ETKDGv3 4
P2P "O6'" 2.417 -0.394 1.225 ETKDGv3 5
P2P "C5'" 2.552 -0.948 -0.064 ETKDGv3 6
P2P "C4'" 1.515 -0.328 -1.006 ETKDGv3 7
P2P "O5'" 0.214 -0.512 -0.483 ETKDGv3 8
P2P "C3'" 1.759 1.166 -1.248 ETKDGv3 9
P2P "O3'" 2.424 1.379 -2.467 ETKDGv3 10
P2P "C2'" 0.358 1.731 -1.253 ETKDGv3 11
P2P "O2'" -0.197 1.747 -2.550 ETKDGv3 12
P2P "C1'" -0.370 0.761 -0.323 ETKDGv3 13
P2P C8 -2.671 1.850 -0.733 ETKDGv3 14
P2P N9 -3.914 1.624 -0.423 ETKDGv3 15
P2P C4 -3.923 0.262 -0.026 ETKDGv3 16
P2P C5 -2.728 -0.260 -0.093 ETKDGv3 17
P2P N7 -1.810 0.705 -0.593 ETKDGv3 18
P2P N3 -5.026 -0.443 0.554 ETKDGv3 19
P2P C2 -4.828 -1.651 1.015 ETKDGv3 20
P2P N1 -3.511 -2.250 0.954 ETKDGv3 21
P2P C6 -2.495 -1.610 0.439 ETKDGv3 22
P2P O11 -5.882 -2.365 1.575 ETKDGv3 23
P2P HOP2 3.594 0.580 3.610 ETKDGv3 24
P2P HOP3 5.216 0.139 1.519 ETKDGv3 25
P2P "H5'1" 2.373 -2.047 -0.036 ETKDGv3 26
P2P "H5'2" 3.566 -0.753 -0.481 ETKDGv3 27
P2P "H4'" 1.567 -0.869 -1.978 ETKDGv3 28
P2P "H3'" 2.338 1.618 -0.408 ETKDGv3 29
P2P "HO3'" 2.665 2.342 -2.491 ETKDGv3 30
P2P "H2'" 0.345 2.763 -0.839 ETKDGv3 31
P2P "HO2'" -0.230 0.814 -2.888 ETKDGv3 32
P2P "H1'" -0.221 1.085 0.732 ETKDGv3 33
P2P H8 -2.321 2.826 -1.041 ETKDGv3 34
P2P H6 -1.521 -2.076 0.412 ETKDGv3 35
P2P HO11 -6.812 -1.966 1.632 ETKDGv3 36
#