data_P7V
#
_chem_comp.id P7V
_chem_comp.name 2-(4-bromophenyl)-N-hydroxy-1,3-oxazole-4-carboxamide
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C10 H7 Br N2 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2019-08-06
_chem_comp.pdbx_modified_date 2020-01-31
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 283.078
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code P7V
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6Q0Z
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
P7V C02 C1 C 0 1 N N N N N N 32.919 -4.819 -35.740 4.796 0.146 -0.000 C02 P7V 1
P7V C05 C2 C 0 1 Y N N N N N 32.604 -5.514 -34.462 3.466 -0.492 -0.002 C05 P7V 2
P7V C06 C3 C 0 1 Y N N N N N 32.661 -6.854 -34.164 3.212 -1.830 0.002 C06 P7V 3
P7V C08 C4 C 0 1 Y N N N N N 32.067 -5.810 -32.385 1.319 -0.756 -0.003 C08 P7V 4
P7V C09 C5 C 0 1 Y N N N N N 31.622 -5.621 -30.985 -0.132 -0.476 -0.002 C09 P7V 5
P7V C10 C6 C 0 1 Y N N N N N 31.690 -4.353 -30.417 -1.049 -1.528 -0.004 C10 P7V 6
P7V C11 C7 C 0 1 Y N N N N N 31.268 -4.159 -29.105 -2.402 -1.260 -0.003 C11 P7V 7
P7V C12 C8 C 0 1 Y N N N N N 30.772 -5.239 -28.401 -2.852 0.050 -0.000 C12 P7V 8
P7V C14 C9 C 0 1 Y N N N N N 30.691 -6.502 -28.949 -1.947 1.098 0.002 C14 P7V 9
P7V C15 C10 C 0 1 Y N N N N N 31.120 -6.697 -30.260 -0.591 0.842 0.006 C15 P7V 10
P7V N03 N1 N 0 1 N N N N N N 34.186 -5.095 -36.302 4.899 1.490 -0.004 N03 P7V 11
P7V N16 N2 N 0 1 Y N N N N N 32.215 -4.844 -33.281 2.268 0.146 -0.001 N16 P7V 12
P7V O01 O1 O 0 1 N N N N N N 32.168 -4.038 -36.262 5.800 -0.541 0.010 O01 P7V 13
P7V O04 O2 O 0 1 N N N N N N 34.438 -4.480 -37.382 6.176 2.102 -0.003 O04 P7V 14
P7V O07 O3 O 0 1 Y N N N N N 32.311 -7.055 -32.865 1.878 -1.980 -0.001 O07 P7V 15
P7V BR1 BR1 BR 0 0 N N N N N N 30.168 -4.973 -26.570 -4.708 0.409 0.001 BR1 P7V 16
P7V H1 H1 H 0 1 N N N N N N 32.942 -7.632 -34.858 3.947 -2.622 0.006 H1 P7V 17
P7V H2 H2 H 0 1 N N N N N N 32.069 -3.521 -30.992 -0.700 -2.550 -0.006 H2 P7V 18
P7V H3 H3 H 0 1 N N N N N N 31.327 -3.183 -28.646 -3.113 -2.073 -0.004 H3 P7V 19
P7V H4 H4 H 0 1 N N N N N N 30.301 -7.327 -28.371 -2.303 2.117 0.004 H4 P7V 20
P7V H5 H5 H 0 1 N N N N N N 31.063 -7.677 -30.710 0.113 1.661 0.012 H5 P7V 21
P7V H6 H6 H 0 1 N N N N N N 34.835 -5.728 -35.880 4.098 2.037 -0.008 H6 P7V 22
P7V H7 H7 H 0 1 N N N N N N 33.701 -3.925 -37.610 6.148 3.068 -0.006 H7 P7V 23
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
P7V O04 N03 SING N N 1
P7V N03 C02 SING N N 2
P7V O01 C02 DOUB N N 3
P7V C02 C05 SING N N 4
P7V C05 C06 DOUB Y N 5
P7V C05 N16 SING Y N 6
P7V C06 O07 SING Y N 7
P7V N16 C08 DOUB Y N 8
P7V O07 C08 SING Y N 9
P7V C08 C09 SING N N 10
P7V C09 C10 DOUB Y N 11
P7V C09 C15 SING Y N 12
P7V C10 C11 SING Y N 13
P7V C15 C14 DOUB Y N 14
P7V C11 C12 DOUB Y N 15
P7V C14 C12 SING Y N 16
P7V C12 BR1 SING N N 17
P7V C06 H1 SING N N 18
P7V C10 H2 SING N N 19
P7V C11 H3 SING N N 20
P7V C14 H4 SING N N 21
P7V C15 H5 SING N N 22
P7V N03 H6 SING N N 23
P7V O04 H7 SING N N 24
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
P7V SMILES ACDLabs 12.01 C(c2coc(c1ccc(Br)cc1)n2)(NO)=O
P7V InChI InChI 1.03 InChI=1S/C10H7BrN2O3/c11-7-3-1-6(2-4-7)10-12-8(5-16-10)9(14)13-15/h1-5,15H,(H,13,14)
P7V InChIKey InChI 1.03 KHPRTOQUGAUDCM-UHFFFAOYSA-N
P7V SMILES_CANONICAL CACTVS 3.385 ONC(=O)c1coc(n1)c2ccc(Br)cc2
P7V SMILES CACTVS 3.385 ONC(=O)c1coc(n1)c2ccc(Br)cc2
P7V SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 c1cc(ccc1c2nc(co2)C(=O)NO)Br
P7V SMILES "OpenEye OEToolkits" 2.0.7 c1cc(ccc1c2nc(co2)C(=O)NO)Br
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
P7V "SYSTEMATIC NAME" ACDLabs 12.01 2-(4-bromophenyl)-N-hydroxy-1,3-oxazole-4-carboxamide
P7V "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 2-(4-bromophenyl)-~{N}-oxidanyl-1,3-oxazole-4-carboxamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
P7V 'Create component' 2019-08-06 RCSB
P7V 'Initial release' 2020-02-05 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
P7V C02 C 4.492 3.044 1
P7V C05 C 5.373 1.831 2
P7V C06 C 6.873 1.831 3
P7V C08 C 6.123 -0.478 4
P7V C09 C 6.123 -1.978 5
P7V C10 C 7.422 -2.728 6
P7V C11 C 7.422 -4.228 7
P7V C12 C 6.123 -4.978 8
P7V C14 C 4.824 -4.228 9
P7V C15 C 4.824 -2.728 10
P7V N03 N 5.102 4.415 11
P7V N16 N 4.910 0.404 12
P7V O01 O 3.000 2.887 13
P7V O04 O 4.220 5.628 14
P7V O07 O 7.337 0.404 15
P7V BR1 Br 6.123 -6.478 16
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
P7V O04 N03 SINGLE NONE 1
P7V N03 C02 SINGLE NONE 2
P7V O01 C02 DOUBLE NONE 3
P7V C02 C05 SINGLE NONE 4
P7V C05 C06 DOUBLE NONE 5
P7V C05 N16 SINGLE NONE 6
P7V C06 O07 SINGLE NONE 7
P7V N16 C08 DOUBLE NONE 8
P7V O07 C08 SINGLE NONE 9
P7V C08 C09 SINGLE NONE 10
P7V C09 C10 DOUBLE NONE 11
P7V C09 C15 SINGLE NONE 12
P7V C10 C11 SINGLE NONE 13
P7V C15 C14 DOUBLE NONE 14
P7V C11 C12 DOUBLE NONE 15
P7V C14 C12 SINGLE NONE 16
P7V C12 BR1 SINGLE NONE 17
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
P7V MurckoScaffold S1 scaffold c1ccc(-c2ncco2)cc1 InChI=1S/C9H7NO/c1-2-4-8(5-3-1)9-10-6-7-11-9/h1-7H RQCBPOPQTLHDFC-UHFFFAOYSA-N
P7V amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
P7V oxazole F2 fragment c1cocn1 InChI=1S/C3H3NO/c1-2-5-3-4-1/h1-3H ZCQWOFVYLHDMMC-UHFFFAOYSA-N
P7V phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
P7V C05 S1 1
P7V C06 S1 1
P7V C08 S1 1
P7V C09 S1 1
P7V C10 S1 1
P7V C11 S1 1
P7V C12 S1 1
P7V C14 S1 1
P7V C15 S1 1
P7V N16 S1 1
P7V O07 S1 1
P7V N03 F1 1
P7V C02 F1 1
P7V O01 F1 1
P7V C05 F1 1
P7V C06 F2 1
P7V C05 F2 1
P7V N16 F2 1
P7V C08 F2 1
P7V O07 F2 1
P7V C09 F3 1
P7V C10 F3 1
P7V C11 F3 1
P7V C12 F3 1
P7V C14 F3 1
P7V C15 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id P7V
_pdbe_chem_comp_rdkit_properties.exactmw 281.964
_pdbe_chem_comp_rdkit_properties.amw 283.081
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 5
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 3
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 4
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 16
_pdbe_chem_comp_rdkit_properties.NumAtoms 23
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 6
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 109.174
_pdbe_chem_comp_rdkit_properties.tpsa 75.360
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.788
_pdbe_chem_comp_rdkit_properties.CrippenMR 57.304
_pdbe_chem_comp_rdkit_properties.chi0v 9.083
_pdbe_chem_comp_rdkit_properties.chi1v 4.698
_pdbe_chem_comp_rdkit_properties.chi2v 1.948
_pdbe_chem_comp_rdkit_properties.chi3v 1.948
_pdbe_chem_comp_rdkit_properties.chi4v 1.088
_pdbe_chem_comp_rdkit_properties.chi0n 14.497
_pdbe_chem_comp_rdkit_properties.chi1n 7.260
_pdbe_chem_comp_rdkit_properties.chi2n 1.552
_pdbe_chem_comp_rdkit_properties.chi3n 1.552
_pdbe_chem_comp_rdkit_properties.chi4n 0.890
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.660
_pdbe_chem_comp_rdkit_properties.kappa1 5.113
_pdbe_chem_comp_rdkit_properties.kappa2 4.461
_pdbe_chem_comp_rdkit_properties.kappa3 2.123
_pdbe_chem_comp_rdkit_properties.Phi 1.426
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
P7V UniChem ChEMBL CHEMBL3770095
P7V UniChem PDBe P7V
P7V UniChem ZINC ZINC000653701701
P7V UniChem SureChEMBL SCHEMBL24754675
P7V UniChem Nikkaji J3.601.433D
P7V UniChem BindingDb 50148612
P7V UniChem PubChem 127027171
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
P7V C02 3.428 0.220 0.166 ETKDGv3 1
P7V C05 2.044 -0.286 0.223 ETKDGv3 2
P7V C06 1.661 -1.534 0.455 ETKDGv3 3
P7V C08 -0.108 -0.261 0.148 ETKDGv3 4
P7V C09 -1.517 0.164 0.019 ETKDGv3 5
P7V C10 -1.841 1.445 -0.243 ETKDGv3 6
P7V C11 -3.259 1.845 -0.367 ETKDGv3 7
P7V C12 -4.230 0.935 -0.220 ETKDGv3 8
P7V C14 -3.883 -0.472 0.068 ETKDGv3 9
P7V C15 -2.600 -0.838 0.181 ETKDGv3 10
P7V N03 4.554 -0.638 0.384 ETKDGv3 11
P7V N16 0.901 0.542 0.023 ETKDGv3 12
P7V O01 3.619 1.441 -0.081 ETKDGv3 13
P7V O04 5.813 -0.140 0.327 ETKDGv3 14
P7V O07 0.278 -1.568 0.418 ETKDGv3 15
P7V BR1 -6.063 1.448 -0.380 ETKDGv3 16
P7V H1 2.291 -2.392 0.643 ETKDGv3 17
P7V H2 -1.077 2.202 -0.367 ETKDGv3 18
P7V H3 -3.505 2.878 -0.578 ETKDGv3 19
P7V H4 -4.668 -1.207 0.187 ETKDGv3 20
P7V H5 -2.360 -1.872 0.393 ETKDGv3 21
P7V H6 4.428 -1.647 0.614 ETKDGv3 22
P7V H7 6.094 -0.267 -0.615 ETKDGv3 23
#