data_P97
#
_chem_comp.id P97
_chem_comp.name D-phenylalanyl-N-[(4-chloropyridin-3-yl)methyl]-L-prolinamide
_chem_comp.type peptide-like
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C20 H23 Cl N4 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2011-06-21
_chem_comp.pdbx_modified_date 2012-06-15
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 386.875
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code P97
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 3SHA
_chem_comp.pdbx_subcomponent_list "DPN PRO NNU"
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
P97 N4 N4 N 0 1 N N N N N N -16.473 -15.210 -23.085 3.588 -1.801 -1.051 N DPN 1
P97 C3 C3 C 0 1 N N R N N N -17.753 -14.520 -23.069 3.222 -0.583 -0.315 CA DPN 2
P97 C5 C5 C 0 1 N N N N N N -17.534 -13.146 -22.483 1.803 -0.701 0.178 C DPN 3
P97 O7 O7 O 0 1 N N N N N N -16.592 -12.451 -22.850 1.283 -1.793 0.271 O DPN 4
P97 C2 C2 C 0 1 N N N N N N -18.293 -14.479 -24.501 4.164 -0.406 0.878 CB DPN 5
P97 C1 C1 C 0 1 Y N N N N N -19.710 -13.946 -24.565 5.566 -0.165 0.380 CG DPN 6
P97 C8 C8 C 0 1 Y N N N N N -20.767 -14.606 -23.941 6.002 1.125 0.140 CD1 DPN 7
P97 C12 C12 C 0 1 Y N N N N N -19.989 -12.793 -25.282 6.417 -1.233 0.169 CD2 DPN 8
P97 C9 C9 C 0 1 Y N N N N N -22.059 -14.089 -24.032 7.287 1.346 -0.317 CE1 DPN 9
P97 C11 C11 C 0 1 Y N N N N N -21.277 -12.268 -25.365 7.702 -1.012 -0.292 CE2 DPN 10
P97 C10 C10 C 0 1 Y N N N N N -22.334 -12.926 -24.740 8.137 0.278 -0.533 CZ DPN 11
P97 N6 N6 N 0 1 N N N N N N -18.380 -12.703 -21.568 1.113 0.405 0.516 N PRO 12
P97 C13 C13 C 0 1 N N S N N N -18.156 -11.384 -20.976 -0.272 0.434 1.009 CA PRO 13
P97 C14 C14 C 0 1 N N N N N N -16.805 -11.350 -20.304 -1.194 -0.175 -0.016 C PRO 14
P97 O15 O15 O 0 1 N N N N N N -16.407 -12.290 -19.614 -0.745 -0.596 -1.061 O PRO 15
P97 C19 C19 C 0 1 N N N N N N -19.284 -11.203 -19.964 -0.646 1.914 1.237 CB PRO 16
P97 C20 C20 C 0 1 N N N N N N -20.308 -12.287 -20.284 0.354 2.671 0.324 CG PRO 17
P97 C21 C21 C 0 1 N N N N N N -19.542 -13.395 -20.996 1.622 1.788 0.457 CD PRO 18
P97 N16 N16 N 0 1 N N N N N N -16.044 -10.274 -20.532 -2.517 -0.253 0.229 N16 NNU 19
P97 C17 C17 C 0 1 N N N N N N -14.708 -10.108 -19.952 -3.413 -0.845 -0.766 C17 NNU 20
P97 C18 C18 C 0 1 Y N N N N N -13.668 -10.901 -20.710 -4.829 -0.811 -0.252 C18 NNU 21
P97 C22 C22 C 0 1 Y N N N N N -13.347 -12.202 -20.332 -5.399 -1.940 0.303 C22 NNU 22
P97 N23 N23 N 0 1 Y N N N N N -12.423 -12.896 -21.010 -6.638 -1.918 0.756 N23 NNU 23
P97 C24 C24 C 0 1 Y N N N N N -11.780 -12.377 -22.065 -7.378 -0.828 0.699 C24 NNU 24
P97 C25 C25 C 0 1 Y N N N N N -12.056 -11.084 -22.484 -6.877 0.340 0.157 C25 NNU 25
P97 C26 C26 C 0 1 Y N N N N N -13.008 -10.361 -21.782 -5.575 0.357 -0.324 C26 NNU 26
P97 CL27 CL27 CL 0 0 N N N N N N -13.397 -8.708 -22.306 -4.899 1.803 -1.006 CL27 NNU 27
P97 HN4 HN4 H 0 1 N N N N N N -16.102 -15.248 -22.157 3.518 -2.615 -0.460 H DPN 28
P97 HN4A HN4A H 0 0 N N N N N N -16.600 -16.140 -23.431 3.023 -1.906 -1.880 H2 DPN 29
P97 H3 H3 H 0 1 N N N N N N -18.501 -15.034 -22.448 3.307 0.280 -0.976 HA DPN 30
P97 H2 H2 H 0 1 N N N N N N -18.285 -15.501 -24.908 4.146 -1.306 1.492 HB2 DPN 31
P97 H2A H2A H 0 1 N N N N N N -17.645 -13.823 -25.101 3.838 0.447 1.474 HB3 DPN 32
P97 H8 H8 H 0 1 N N N N N N -20.586 -15.516 -23.388 5.337 1.960 0.309 HD1 DPN 33
P97 H12 H12 H 0 1 N N N N N N -19.183 -12.286 -25.792 6.078 -2.240 0.361 HD2 DPN 34
P97 H9 H9 H 0 1 N N N N N N -22.868 -14.607 -23.538 7.628 2.354 -0.505 HE1 DPN 35
P97 H11 H11 H 0 1 N N N N N N -21.455 -11.354 -25.912 8.366 -1.847 -0.461 HE2 DPN 36
P97 H10 H10 H 0 1 N N N N N N -23.341 -12.542 -24.804 9.142 0.451 -0.890 HZ DPN 37
P97 H13 H13 H 0 1 N N N N N N -18.159 -10.577 -21.723 -0.343 -0.117 1.946 HA PRO 38
P97 H19 H19 H 0 1 N N N N N N -18.907 -11.315 -18.937 -1.673 2.105 0.925 HB2 PRO 39
P97 H19A H19A H 0 0 N N N N N N -19.734 -10.203 -20.058 -0.501 2.192 2.281 HB3 PRO 40
P97 H20 H20 H 0 1 N N N N N N -20.771 -12.667 -19.361 -0.001 2.697 -0.706 HG2 PRO 41
P97 H20A H20A H 0 0 N N N N N N -21.104 -11.889 -20.931 0.540 3.677 0.698 HG3 PRO 42
P97 H21 H21 H 0 1 N N N N N N -20.154 -13.868 -21.779 2.163 2.031 1.372 HD2 PRO 43
P97 H21A H21A H 0 0 N N N N N N -19.234 -14.185 -20.295 2.268 1.918 -0.412 HD3 PRO 44
P97 HN16 HN16 H 0 0 N N N N N N -16.402 -9.552 -21.124 -2.876 0.084 1.066 HN16 NNU 45
P97 H17 H17 H 0 1 N N N N N N -14.436 -9.043 -19.989 -3.350 -0.278 -1.695 H17 NNU 46
P97 H17A H17A H 0 0 N N N N N N -14.729 -10.458 -18.910 -3.119 -1.878 -0.951 H17A NNU 47
P97 H22 H22 H 0 1 N N N N N N -13.846 -12.654 -19.488 -4.824 -2.852 0.367 H22 NNU 48
P97 H24 H24 H 0 1 N N N N N N -11.044 -12.968 -22.591 -8.389 -0.849 1.080 H24 NNU 49
P97 H25 H25 H 0 1 N N N N N N -11.544 -10.653 -23.332 -7.489 1.229 0.113 H25 NNU 50
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
P97 C1 C2 SING N N 1
P97 C1 C8 DOUB Y N 2
P97 C1 C12 SING Y N 3
P97 C2 C3 SING N N 4
P97 C3 N4 SING N N 5
P97 C3 C5 SING N N 6
P97 C5 N6 SING N N 7
P97 C5 O7 DOUB N N 8
P97 N6 C13 SING N N 9
P97 N6 C21 SING N N 10
P97 C8 C9 SING Y N 11
P97 C9 C10 DOUB Y N 12
P97 C10 C11 SING Y N 13
P97 C11 C12 DOUB Y N 14
P97 C13 C14 SING N N 15
P97 C13 C19 SING N N 16
P97 C14 O15 DOUB N N 17
P97 C14 N16 SING N N 18
P97 N16 C17 SING N N 19
P97 C17 C18 SING N N 20
P97 C18 C22 DOUB Y N 21
P97 C18 C26 SING Y N 22
P97 C19 C20 SING N N 23
P97 C20 C21 SING N N 24
P97 C22 N23 SING Y N 25
P97 N23 C24 DOUB Y N 26
P97 C24 C25 SING Y N 27
P97 C25 C26 DOUB Y N 28
P97 C26 CL27 SING N N 29
P97 C2 H2 SING N N 30
P97 C2 H2A SING N N 31
P97 C3 H3 SING N N 32
P97 N4 HN4 SING N N 33
P97 N4 HN4A SING N N 34
P97 C8 H8 SING N N 35
P97 C9 H9 SING N N 36
P97 C10 H10 SING N N 37
P97 C11 H11 SING N N 38
P97 C12 H12 SING N N 39
P97 C13 H13 SING N N 40
P97 N16 HN16 SING N N 41
P97 C17 H17 SING N N 42
P97 C17 H17A SING N N 43
P97 C19 H19 SING N N 44
P97 C19 H19A SING N N 45
P97 C20 H20 SING N N 46
P97 C20 H20A SING N N 47
P97 C21 H21 SING N N 48
P97 C21 H21A SING N N 49
P97 C22 H22 SING N N 50
P97 C24 H24 SING N N 51
P97 C25 H25 SING N N 52
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
P97 SMILES ACDLabs 12.01 O=C(NCc1c(Cl)ccnc1)C3N(C(=O)C(N)Cc2ccccc2)CCC3
P97 InChI InChI 1.03 InChI=1S/C20H23ClN4O2/c21-16-8-9-23-12-15(16)13-24-19(26)18-7-4-10-25(18)20(27)17(22)11-14-5-2-1-3-6-14/h1-3,5-6,8-9,12,17-18H,4,7,10-11,13,22H2,(H,24,26)/t17-,18+/m1/s1
P97 InChIKey InChI 1.03 ZRBVLANXQQYBLM-MSOLQXFVSA-N
P97 SMILES_CANONICAL CACTVS 3.370 N[C@H](Cc1ccccc1)C(=O)N2CCC[C@H]2C(=O)NCc3cnccc3Cl
P97 SMILES CACTVS 3.370 N[CH](Cc1ccccc1)C(=O)N2CCC[CH]2C(=O)NCc3cnccc3Cl
P97 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 c1ccc(cc1)C[C@H](C(=O)N2CCC[C@H]2C(=O)NCc3cnccc3Cl)N
P97 SMILES "OpenEye OEToolkits" 1.7.2 c1ccc(cc1)CC(C(=O)N2CCCC2C(=O)NCc3cnccc3Cl)N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
P97 "SYSTEMATIC NAME" ACDLabs 12.01 D-phenylalanyl-N-[(4-chloropyridin-3-yl)methyl]-L-prolinamide
P97 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 (2S)-1-[(2R)-2-azanyl-3-phenyl-propanoyl]-N-[(4-chloranylpyridin-3-yl)methyl]pyrrolidine-2-carboxamide
#
_pdbx_chem_comp_audit.comp_id P97
_pdbx_chem_comp_audit.action_type 'Create component'
_pdbx_chem_comp_audit.date 2011-06-21
_pdbx_chem_comp_audit.processing_site PDBJ
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
P97 N4 N 8.977 3.492 1
P97 C3 C 7.550 3.029 2
P97 C5 C 7.238 1.562 3
P97 O7 O 5.812 1.098 4
P97 C2 C 6.435 4.032 5
P97 C1 C 6.747 5.500 6
P97 C8 C 8.174 5.963 7
P97 C12 C 5.633 6.503 8
P97 C9 C 8.486 7.430 9
P97 C11 C 5.944 7.971 10
P97 C10 C 7.371 8.434 11
P97 N6 N 8.353 0.558 12
P97 C13 C 8.196 -0.934 13
P97 C14 C 6.897 -1.684 14
P97 O15 O 5.598 -0.934 15
P97 C19 C 9.566 -1.544 16
P97 C20 C 10.570 -0.429 17
P97 C21 C 9.820 0.870 18
P97 N16 N 6.897 -3.184 19
P97 C17 C 5.598 -3.934 20
P97 C18 C 5.598 -5.434 21
P97 C22 C 6.897 -6.184 22
P97 N23 N 6.897 -7.684 23
P97 C24 C 5.598 -8.434 24
P97 C25 C 4.299 -7.684 25
P97 C26 C 4.299 -6.184 26
P97 CL27 Cl 3.000 -5.434 27
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
P97 C1 C2 SINGLE NONE 1
P97 C1 C8 DOUBLE NONE 2
P97 C1 C12 SINGLE NONE 3
P97 C2 C3 SINGLE NONE 4
P97 C3 N4 SINGLE BEGINWEDGE 5
P97 C3 C5 SINGLE NONE 6
P97 C5 N6 SINGLE NONE 7
P97 C5 O7 DOUBLE NONE 8
P97 N6 C13 SINGLE NONE 9
P97 N6 C21 SINGLE NONE 10
P97 C8 C9 SINGLE NONE 11
P97 C9 C10 DOUBLE NONE 12
P97 C10 C11 SINGLE NONE 13
P97 C11 C12 DOUBLE NONE 14
P97 C13 C14 SINGLE BEGINWEDGE 15
P97 C13 C19 SINGLE NONE 16
P97 C14 O15 DOUBLE NONE 17
P97 C14 N16 SINGLE NONE 18
P97 N16 C17 SINGLE NONE 19
P97 C17 C18 SINGLE NONE 20
P97 C18 C22 DOUBLE NONE 21
P97 C18 C26 SINGLE NONE 22
P97 C19 C20 SINGLE NONE 23
P97 C20 C21 SINGLE NONE 24
P97 C22 N23 SINGLE NONE 25
P97 N23 C24 DOUBLE NONE 26
P97 C24 C25 SINGLE NONE 27
P97 C25 C26 DOUBLE NONE 28
P97 C26 CL27 SINGLE NONE 29
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
P97 MurckoScaffold S1 scaffold 'O=C(NCc1cccnc1)[C@@H]1CCCN1C(=O)CCc1ccccc1' InChI=1S/C20H23N3O2/c24-19(11-10-16-6-2-1-3-7-16)23-13-5-9-18(23)20(25)22-15-17-8-4-12-21-14-17/h1-4,6-8,12,14,18H,5,9-11,13,15H2,(H,22,25)/t18-/m0/s1 ZDVMQWAHCSOBMR-SFHVURJKSA-N
P97 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
P97 peptide F2 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
P97 phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
P97 pyridine F4 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
P97 C3 S1 1
P97 C5 S1 1
P97 O7 S1 1
P97 C2 S1 1
P97 C1 S1 1
P97 C8 S1 1
P97 C12 S1 1
P97 C9 S1 1
P97 C11 S1 1
P97 C10 S1 1
P97 N6 S1 1
P97 C13 S1 1
P97 C14 S1 1
P97 O15 S1 1
P97 C19 S1 1
P97 C20 S1 1
P97 C21 S1 1
P97 N16 S1 1
P97 C17 S1 1
P97 C18 S1 1
P97 C22 S1 1
P97 N23 S1 1
P97 C24 S1 1
P97 C25 S1 1
P97 C26 S1 1
P97 N6 F1 1
P97 C5 F1 1
P97 O7 F1 1
P97 C3 F1 1
P97 N16 F1 2
P97 C14 F1 2
P97 O15 F1 2
P97 C13 F1 2
P97 O7 F2 1
P97 C5 F2 1
P97 C3 F2 1
P97 N4 F2 1
P97 O15 F2 2
P97 C14 F2 2
P97 C13 F2 2
P97 N6 F2 2
P97 C1 F3 1
P97 C8 F3 1
P97 C9 F3 1
P97 C10 F3 1
P97 C11 F3 1
P97 C12 F3 1
P97 C22 F4 1
P97 C18 F4 1
P97 C26 F4 1
P97 C25 F4 1
P97 C24 F4 1
P97 N23 F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id P97
_pdbe_chem_comp_rdkit_properties.exactmw 386.151
_pdbe_chem_comp_rdkit_properties.amw 386.883
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 6
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 7
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 4
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 27
_pdbe_chem_comp_rdkit_properties.NumAtoms 50
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 7
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.350
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 2
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 195.751
_pdbe_chem_comp_rdkit_properties.tpsa 88.320
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.803
_pdbe_chem_comp_rdkit_properties.CrippenMR 103.418
_pdbe_chem_comp_rdkit_properties.chi0v 13.739
_pdbe_chem_comp_rdkit_properties.chi1v 7.264
_pdbe_chem_comp_rdkit_properties.chi2v 3.085
_pdbe_chem_comp_rdkit_properties.chi3v 3.085
_pdbe_chem_comp_rdkit_properties.chi4v 1.779
_pdbe_chem_comp_rdkit_properties.chi0n 35.983
_pdbe_chem_comp_rdkit_properties.chi1n 18.228
_pdbe_chem_comp_rdkit_properties.chi2n 2.802
_pdbe_chem_comp_rdkit_properties.chi3n 2.802
_pdbe_chem_comp_rdkit_properties.chi4n 1.653
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.440
_pdbe_chem_comp_rdkit_properties.kappa1 5.550
_pdbe_chem_comp_rdkit_properties.kappa2 8.971
_pdbe_chem_comp_rdkit_properties.kappa3 4.842
_pdbe_chem_comp_rdkit_properties.Phi 1.844
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
P97 UniChem PDBe P97
P97 UniChem ZINC ZINC000095920845
P97 UniChem PubChem 57336486
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
P97 N4 1.917 0.345 -2.340 ETKDGv3 1
P97 C3 0.711 0.604 -1.551 ETKDGv3 2
P97 C5 -0.326 -0.466 -1.796 ETKDGv3 3
P97 O7 -1.477 -0.118 -2.175 ETKDGv3 4
P97 C2 1.036 0.668 -0.045 ETKDGv3 5
P97 C1 1.902 1.852 0.298 ETKDGv3 6
P97 C8 1.382 3.093 0.342 ETKDGv3 7
P97 C12 3.351 1.662 0.560 ETKDGv3 8
P97 C9 2.242 4.250 0.667 ETKDGv3 9
P97 C11 4.127 2.713 0.851 ETKDGv3 10
P97 C10 3.546 4.069 0.910 ETKDGv3 11
P97 N6 -0.065 -1.855 -1.518 ETKDGv3 12
P97 C13 -1.099 -2.772 -1.065 ETKDGv3 13
P97 C14 -1.659 -2.307 0.256 ETKDGv3 14
P97 O15 -0.928 -2.317 1.284 ETKDGv3 15
P97 C19 -0.422 -4.144 -0.963 ETKDGv3 16
P97 C20 0.898 -4.016 -1.720 ETKDGv3 17
P97 C21 1.189 -2.524 -1.820 ETKDGv3 18
P97 N16 -2.992 -1.782 0.327 ETKDGv3 19
P97 C17 -3.530 -1.173 1.541 ETKDGv3 20
P97 C18 -2.828 0.130 1.834 ETKDGv3 21
P97 C22 -1.990 0.233 2.882 ETKDGv3 22
P97 N23 -1.311 1.470 3.153 ETKDGv3 23
P97 C24 -1.477 2.519 2.403 ETKDGv3 24
P97 C25 -2.376 2.459 1.237 ETKDGv3 25
P97 C26 -3.024 1.321 0.960 ETKDGv3 26
P97 CL27 -4.097 1.266 -0.432 ETKDGv3 27
P97 HN4 1.644 0.300 -3.349 ETKDGv3 28
P97 HN4A 2.554 1.170 -2.258 ETKDGv3 29
P97 H3 0.282 1.584 -1.864 ETKDGv3 30
P97 H2 1.536 -0.271 0.276 ETKDGv3 31
P97 H2A 0.090 0.738 0.535 ETKDGv3 32
P97 H8 0.333 3.259 0.136 ETKDGv3 33
P97 H12 3.786 0.671 0.514 ETKDGv3 34
P97 H9 1.814 5.243 0.708 ETKDGv3 35
P97 H11 5.183 2.572 1.041 ETKDGv3 36
P97 H10 4.177 4.916 1.147 ETKDGv3 37
P97 H13 -1.903 -2.820 -1.832 ETKDGv3 38
P97 H19 -0.206 -4.427 0.090 ETKDGv3 39
P97 H19A -1.060 -4.936 -1.413 ETKDGv3 40
P97 H20 0.782 -4.442 -2.742 ETKDGv3 41
P97 H20A 1.719 -4.552 -1.196 ETKDGv3 42
P97 H21 1.528 -2.272 -2.848 ETKDGv3 43
P97 H21A 1.963 -2.229 -1.079 ETKDGv3 44
P97 HN16 -3.601 -1.820 -0.521 ETKDGv3 45
P97 H17 -3.440 -1.889 2.387 ETKDGv3 46
P97 H17A -4.615 -0.973 1.405 ETKDGv3 47
P97 H22 -1.814 -0.613 3.535 ETKDGv3 48
P97 H24 -0.949 3.435 2.633 ETKDGv3 49
P97 H25 -2.504 3.334 0.613 ETKDGv3 50
#