data_PHH
#
_chem_comp.id PHH
_chem_comp.name 4,5,6,7-TETRACHLORO-PHTHALIDE
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C8 H2 Cl4 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms 4,5,6,7-TETRACHLORO-3H-ISOBENZOFURAN-1-ONE
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2000-10-25
_chem_comp.pdbx_modified_date 2021-03-13
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 271.912
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code PHH
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1G0N
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
PHH C1 C1 C 0 1 Y N N N N N 98.724 71.755 -5.936 -1.229 0.000 -0.890 C1 PHH 1
PHH C2 C2 C 0 1 Y N N N N N 98.501 71.628 -4.585 -1.444 -0.004 0.468 C2 PHH 2
PHH C3 C3 C 0 1 N N N N N N 97.448 72.242 -3.710 -2.690 -0.005 1.319 C3 PHH 3
PHH O4 O4 O 0 1 N N N N N N 97.608 71.817 -2.448 -2.241 -0.003 2.702 O4 PHH 4
PHH C5 C5 C 0 1 N N N N N N 98.771 70.906 -2.439 -0.898 -0.001 2.727 C5 PHH 5
PHH C6 C6 C 0 1 Y N N N N N 99.306 70.821 -3.822 -0.363 -0.001 1.354 C6 PHH 6
PHH C7 C7 C 0 1 Y N N N N N 100.375 70.135 -4.361 0.939 -0.000 0.848 C7 PHH 7
PHH CL7 CL7 CL 0 0 N N N N N N 101.358 69.143 -3.346 2.294 0.003 1.933 CL7 PHH 8
PHH C8 C8 C 0 1 Y N N N N N 100.633 70.252 -5.711 1.145 -0.001 -0.517 C8 PHH 9
PHH CL8 CL8 CL 0 0 N N N N N N 102.003 69.373 -6.358 2.762 0.001 -1.148 CL8 PHH 10
PHH C9 C9 C 0 1 Y N N N N N 99.810 71.054 -6.517 0.066 -0.003 -1.386 C9 PHH 11
PHH CL9 CL9 CL 0 0 N N N N N N 100.109 71.201 -8.238 0.335 -0.004 -3.101 CL9 PHH 12
PHH CL10 CL10 CL 0 0 N N N N N N 97.659 72.769 -6.861 -2.578 0.007 -1.983 CL10 PHH 13
PHH O11 O11 O 0 1 N N N N N N 99.256 70.264 -1.394 -0.221 0.001 3.736 O11 PHH 14
PHH H31 1H3 H 0 1 N N N N N N 97.438 73.354 -3.781 -3.279 -0.899 1.118 H31 PHH 15
PHH H32 2H3 H 0 1 N N N N N N 96.418 72.048 -4.091 -3.282 0.887 1.117 H32 PHH 16
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
PHH C1 C2 DOUB Y N 1
PHH C1 C9 SING Y N 2
PHH C1 CL10 SING N N 3
PHH C2 C3 SING N N 4
PHH C2 C6 SING Y N 5
PHH C3 O4 SING N N 6
PHH C3 H31 SING N N 7
PHH C3 H32 SING N N 8
PHH O4 C5 SING N N 9
PHH C5 C6 SING N N 10
PHH C5 O11 DOUB N N 11
PHH C6 C7 DOUB Y N 12
PHH C7 CL7 SING N N 13
PHH C7 C8 SING Y N 14
PHH C8 CL8 SING N N 15
PHH C8 C9 DOUB Y N 16
PHH C9 CL9 SING N N 17
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
PHH SMILES ACDLabs 10.04 O=C1OCc2c1c(Cl)c(Cl)c(Cl)c2Cl
PHH SMILES_CANONICAL CACTVS 3.341 Clc1c(Cl)c(Cl)c2C(=O)OCc2c1Cl
PHH SMILES CACTVS 3.341 Clc1c(Cl)c(Cl)c2C(=O)OCc2c1Cl
PHH SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 C1c2c(c(c(c(c2Cl)Cl)Cl)Cl)C(=O)O1
PHH SMILES "OpenEye OEToolkits" 1.5.0 C1c2c(c(c(c(c2Cl)Cl)Cl)Cl)C(=O)O1
PHH InChI InChI 1.03 InChI=1S/C8H2Cl4O2/c9-4-2-1-14-8(13)3(2)5(10)7(12)6(4)11/h1H2
PHH InChIKey InChI 1.03 NMWKWBPNKPGATC-UHFFFAOYSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
PHH "SYSTEMATIC NAME" ACDLabs 10.04 4,5,6,7-tetrachloro-2-benzofuran-1(3H)-one
PHH "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 4,5,6,7-tetrachloro-3H-2-benzofuran-1-one
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
PHH 'Create component' 2000-10-25 EBI
PHH 'Modify descriptor' 2011-06-04 RCSB
PHH 'Modify synonyms' 2021-03-13 RCSB
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id PHH
_pdbx_chem_comp_synonyms.name 4,5,6,7-TETRACHLORO-3H-ISOBENZOFURAN-1-ONE
_pdbx_chem_comp_synonyms.provenance PDB
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_drugbank_details.comp_id PHH
_pdbe_chem_comp_drugbank_details.drugbank_id DB03302
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name 4,5,6,7-Tetrachloro-3h-Isobenzofuran-1-One
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number ?
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
_pdbe_chem_comp_synonyms.comp_id PHH
_pdbe_chem_comp_synonyms.name 4,5,6,7-TETRACHLORO-3H-ISOBENZOFURAN-1-ONE
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_drugbank_classification.comp_id PHH
_pdbe_chem_comp_drugbank_classification.drugbank_id DB03302
_pdbe_chem_comp_drugbank_classification.parent Phthalides
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class Isocoumarans
_pdbe_chem_comp_drugbank_classification.superclass 'Organoheterocyclic compounds'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as phthalides. These are compounds containing a 3-hydrocarbylidene-2-benzofuran-1(3H)-one moiety,.'
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
PHH C1 C 5.598 -1.500 1
PHH C2 C 6.897 -0.750 2
PHH C3 C 8.316 -1.207 3
PHH O4 O 9.192 0.000 4
PHH C5 C 8.316 1.207 5
PHH C6 C 6.897 0.750 6
PHH C7 C 5.598 1.500 7
PHH CL7 Cl 5.598 3.000 8
PHH C8 C 4.299 0.750 9
PHH CL8 Cl 3.000 1.500 10
PHH C9 C 4.299 -0.750 11
PHH CL9 Cl 3.000 -1.500 12
PHH CL10 Cl 5.598 -3.000 13
PHH O11 O 8.783 2.633 14
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
PHH C1 C2 DOUBLE NONE 1
PHH C1 C9 SINGLE NONE 2
PHH C1 CL10 SINGLE NONE 3
PHH C2 C3 SINGLE NONE 4
PHH C2 C6 SINGLE NONE 5
PHH C3 O4 SINGLE NONE 6
PHH O4 C5 SINGLE NONE 7
PHH C5 C6 SINGLE NONE 8
PHH C5 O11 DOUBLE NONE 9
PHH C6 C7 DOUBLE NONE 10
PHH C7 CL7 SINGLE NONE 11
PHH C7 C8 SINGLE NONE 12
PHH C8 CL8 SINGLE NONE 13
PHH C8 C9 DOUBLE NONE 14
PHH C9 CL9 SINGLE NONE 15
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
PHH MurckoScaffold S1 scaffold O=C1OCc2ccccc21 InChI=1S/C8H6O2/c9-8-7-4-2-1-3-6(7)5-10-8/h1-4H,5H2 WNZQDUSMALZDQF-UHFFFAOYSA-N
PHH phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
PHH Z56899108 F2 fragment O=C(O)c1cccc(Cl)c1Cl InChI=1S/C7H4Cl2O2/c8-5-3-1-2-4(6(5)9)7(10)11/h1-3H,(H,10,11) QAOJBHRZQQDFHA-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
PHH C1 S1 1
PHH C2 S1 1
PHH C3 S1 1
PHH O4 S1 1
PHH C5 S1 1
PHH C6 S1 1
PHH C7 S1 1
PHH C8 S1 1
PHH C9 S1 1
PHH O11 S1 1
PHH C1 F1 1
PHH C2 F1 1
PHH C6 F1 1
PHH C7 F1 1
PHH C8 F1 1
PHH C9 F1 1
PHH O4 F2 1
PHH C5 F2 1
PHH O11 F2 1
PHH C6 F2 1
PHH C2 F2 1
PHH C1 F2 1
PHH C9 F2 1
PHH C8 F2 1
PHH CL8 F2 1
PHH C7 F2 1
PHH CL7 F2 1
#
_pdbe_chem_comp_rdkit_properties.comp_id PHH
_pdbe_chem_comp_rdkit_properties.exactmw 269.881
_pdbe_chem_comp_rdkit_properties.amw 271.914
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 2
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 0
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 0
_pdbe_chem_comp_rdkit_properties.NumHBD 0
_pdbe_chem_comp_rdkit_properties.NumHBA 2
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 14
_pdbe_chem_comp_rdkit_properties.NumAtoms 16
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 6
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.125
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 102.454
_pdbe_chem_comp_rdkit_properties.tpsa 26.300
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.861
_pdbe_chem_comp_rdkit_properties.CrippenMR 55.070
_pdbe_chem_comp_rdkit_properties.chi0v 9.352
_pdbe_chem_comp_rdkit_properties.chi1v 4.880
_pdbe_chem_comp_rdkit_properties.chi2v 3.519
_pdbe_chem_comp_rdkit_properties.chi3v 3.519
_pdbe_chem_comp_rdkit_properties.chi4v 2.036
_pdbe_chem_comp_rdkit_properties.chi0n 8.328
_pdbe_chem_comp_rdkit_properties.chi1n 4.368
_pdbe_chem_comp_rdkit_properties.chi2n 1.717
_pdbe_chem_comp_rdkit_properties.chi3n 1.717
_pdbe_chem_comp_rdkit_properties.chi4n 1.068
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -0.150
_pdbe_chem_comp_rdkit_properties.kappa1 8.055
_pdbe_chem_comp_rdkit_properties.kappa2 3.456
_pdbe_chem_comp_rdkit_properties.kappa3 1.293
_pdbe_chem_comp_rdkit_properties.Phi 1.988
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
PHH UniChem ChEMBL CHEMBL357452
PHH UniChem DrugBank DB03302
PHH UniChem PDBe PHH
PHH UniChem 'KEGG LIGAND' C18611
PHH UniChem ChEBI 47617
PHH UniChem ZINC ZINC000002012697
PHH UniChem fdasrs 44IHE2M2T4
PHH UniChem 'PubChem TPHARMA' 14872691
PHH UniChem ACTor 27355-22-2
PHH UniChem Nikkaji J1.881C
PHH UniChem 'EPA CompTox Dashboard' DTXSID2058045
PHH UniChem MetaboLights MTBLC47617
PHH UniChem BRENDA 93411
PHH UniChem BRENDA 99858
PHH UniChem ChemicalBook CB3150005
PHH UniChem 'Probes And Drugs' PD007105
PHH UniChem PubChem 33791
PHH UniChem eMolecules 5862008
PHH UniChem SureChEMBL SCHEMBL27454
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
PHH C1 0.617 1.356 -0.202 ETKDGv3 1
PHH C2 -0.481 0.610 -0.030 ETKDGv3 2
PHH C3 -1.918 1.042 0.039 ETKDGv3 3
PHH O4 -2.629 -0.185 0.234 ETKDGv3 4
PHH C5 -1.762 -1.270 0.286 ETKDGv3 5
PHH C6 -0.396 -0.824 0.125 ETKDGv3 6
PHH C7 0.768 -1.483 0.104 ETKDGv3 7
PHH CL7 0.833 -3.231 0.296 ETKDGv3 8
PHH C8 2.014 -0.682 -0.087 ETKDGv3 9
PHH CL8 3.570 -1.510 -0.120 ETKDGv3 10
PHH C9 1.942 0.667 -0.233 ETKDGv3 11
PHH CL9 3.403 1.629 -0.459 ETKDGv3 12
PHH CL10 0.492 3.102 -0.389 ETKDGv3 13
PHH O11 -2.138 -2.460 0.450 ETKDGv3 14
PHH H31 -2.084 1.722 0.901 ETKDGv3 15
PHH H32 -2.231 1.518 -0.914 ETKDGv3 16
#