data_PLT
#
_chem_comp.id PLT
_chem_comp.name "[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-L-TRYPTOPHANE"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C19 H20 N3 O7 P"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 433.352
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code PLT
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 2TYS
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
PLT N1 N1 N 0 1 Y N N N N N 86.155 13.530 12.024 2.921 1.631 2.832 N1 PLT 1
PLT C2 C2 C 0 1 Y N N N N N 85.948 14.153 10.867 3.498 1.550 1.651 C2 PLT 2
PLT C2A C2A C 0 1 N N N N N N 86.967 14.155 9.788 4.816 2.243 1.417 C2A PLT 3
PLT C3 C3 C 0 1 Y N N N N N 84.718 14.812 10.688 2.905 0.838 0.618 C3 PLT 4
PLT O3 O3 O 0 1 N N N N N N 84.400 15.437 9.577 3.503 0.758 -0.597 O3 PLT 5
PLT C4 C4 C 0 1 Y N N N N N 83.806 14.813 11.749 1.680 0.193 0.855 C4 PLT 6
PLT C4A C4A C 0 1 N N N N N N 82.493 15.511 11.533 1.011 -0.581 -0.207 C4A PLT 7
PLT C5 C5 C 0 1 Y N N N N N 84.055 14.148 12.920 1.110 0.311 2.128 C5 PLT 8
PLT C6 C6 C 0 1 Y N N N N N 85.280 13.497 13.060 1.769 1.045 3.093 C6 PLT 9
PLT C5A C5A C 0 1 N N N N N N 83.081 14.147 14.069 -0.205 -0.353 2.440 C5A PLT 10
PLT O4P O4P O 0 1 N N N N N N 81.826 13.477 13.736 -0.566 -0.081 3.796 O4P PLT 11
PLT P P P 0 1 N N N N N N 81.252 12.261 14.459 -1.974 -0.817 4.059 P PLT 12
PLT O1P O1P O 0 1 N N N N N N 79.961 12.072 13.893 -1.818 -2.273 3.838 O1P PLT 13
PLT O2P O2P O 0 1 N N N N N N 81.118 12.682 15.971 -2.443 -0.552 5.576 O2P PLT 14
PLT O3P O3P O 0 1 N N N N N N 82.058 11.032 14.294 -3.081 -0.236 3.045 O3P PLT 15
PLT N N N 0 1 N N N N N N 81.767 15.449 10.350 1.555 -0.677 -1.376 N PLT 16
PLT CA CA C 0 1 N N S N N N 80.464 16.057 10.132 0.891 -1.446 -2.432 CA PLT 17
PLT C C C 0 1 N N N N N N 80.551 17.362 9.385 1.792 -2.569 -2.878 C PLT 18
PLT O O O 0 1 N N N N N N 80.676 17.329 8.078 1.315 -3.598 -3.293 O PLT 19
PLT OXT OXT O 0 1 N N N N N N 80.531 18.508 9.975 3.125 -2.425 -2.815 OXT PLT 20
PLT CB CB C 0 1 N N N N N N 79.697 16.189 11.431 0.592 -0.529 -3.619 CB PLT 21
PLT CG CG C 0 1 Y N N N N N 78.185 16.354 11.315 -0.308 0.592 -3.173 CG PLT 22
PLT CD1 CD1 C 0 1 Y N N N N N 77.422 16.376 10.214 0.078 1.785 -2.694 CD1 PLT 23
PLT NE1 NE1 N 0 1 Y N N N N N 76.067 16.565 10.642 -1.017 2.546 -2.393 NE1 PLT 24
PLT CE2 CE2 C 0 1 Y N N N N N 76.044 16.641 11.952 -2.167 1.844 -2.680 CE2 PLT 25
PLT CZ2 CZ2 C 0 1 Y N N N N N 74.968 16.805 12.758 -3.522 2.138 -2.568 CZ2 PLT 26
PLT CH2 CH2 C 0 1 Y N N N N N 75.186 16.869 14.128 -4.459 1.202 -2.948 CH2 PLT 27
PLT CZ3 CZ3 C 0 1 Y N N N N N 76.429 16.745 14.649 -4.065 -0.033 -3.442 CZ3 PLT 28
PLT CE3 CE3 C 0 1 Y N N N N N 77.560 16.559 13.823 -2.740 -0.343 -3.559 CE3 PLT 29
PLT CD2 CD2 C 0 1 Y N N N N N 77.339 16.513 12.441 -1.773 0.592 -3.186 CD2 PLT 30
PLT H2A1 1H2A H 0 0 N N N N N N 86.793 14.677 8.818 5.632 1.564 1.662 H2A1 PLT 31
PLT H2A2 2H2A H 0 0 N N N N N N 87.919 14.542 10.218 4.890 2.537 0.370 H2A2 PLT 32
PLT H2A3 3H2A H 0 0 N N N N N N 87.228 13.094 9.562 4.878 3.129 2.048 H2A3 PLT 33
PLT HO3 HO3 H 0 1 N N N N N N 83.569 15.882 9.456 3.174 1.501 -1.120 HO3 PLT 34
PLT H4A H4A H 0 1 N N N N N N 82.017 16.126 12.315 0.068 -1.067 -0.009 H4A PLT 35
PLT H6 H6 H 0 1 N N N N N N 85.554 12.959 13.983 1.335 1.140 4.077 H6 PLT 36
PLT H5A1 1H5A H 0 0 N N N N N N 83.540 13.707 14.984 -0.976 0.035 1.774 H5A1 PLT 37
PLT H5A2 2H5A H 0 0 N N N N N N 82.897 15.182 14.440 -0.111 -1.429 2.298 H5A2 PLT 38
PLT HOP2 2HOP H 0 0 N N N N N N 80.760 11.925 16.420 -3.288 -1.009 5.691 HOP2 PLT 39
PLT HOP3 3HOP H 0 0 N N N N N N 81.700 10.275 14.743 -3.152 0.711 3.222 HOP3 PLT 40
PLT HA HA H 0 1 N N N N N N 79.887 15.366 9.472 -0.041 -1.860 -2.048 HA PLT 41
PLT HXT HXT H 0 1 N N N N N N 80.585 19.331 9.503 3.703 -3.145 -3.101 HXT PLT 42
PLT HB1 1HB H 0 1 N N N N N N 79.930 15.323 12.093 1.525 -0.116 -4.003 HB1 PLT 43
PLT HB2 2HB H 0 1 N N N N N N 80.120 17.026 12.033 0.098 -1.101 -4.405 HB2 PLT 44
PLT HD1 HD1 H 0 1 N N N N N N 77.818 16.264 9.190 1.104 2.097 -2.564 HD1 PLT 45
PLT HNE HNE H 0 1 N N N N N N 75.218 16.637 10.080 -0.989 3.446 -2.033 HNE PLT 46
PLT HZ2 HZ2 H 0 1 N N N N N N 73.959 16.882 12.318 -3.838 3.097 -2.185 HZ2 PLT 47
PLT HH2 HH2 H 0 1 N N N N N N 74.344 17.023 14.824 -5.510 1.433 -2.860 HH2 PLT 48
PLT HZ3 HZ3 H 0 1 N N N N N N 76.520 16.795 15.747 -4.813 -0.755 -3.735 HZ3 PLT 49
PLT HE3 HE3 H 0 1 N N N N N N 78.575 16.453 14.240 -2.441 -1.307 -3.944 HE3 PLT 50
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
PLT N1 C2 DOUB Y N 1
PLT N1 C6 SING Y N 2
PLT C2 C2A SING N N 3
PLT C2 C3 SING Y N 4
PLT C2A H2A1 SING N N 5
PLT C2A H2A2 SING N N 6
PLT C2A H2A3 SING N N 7
PLT C3 O3 SING N N 8
PLT C3 C4 DOUB Y N 9
PLT O3 HO3 SING N N 10
PLT C4 C4A SING N N 11
PLT C4 C5 SING Y N 12
PLT C4A N DOUB N E 13
PLT C4A H4A SING N N 14
PLT C5 C6 DOUB Y N 15
PLT C5 C5A SING N N 16
PLT C6 H6 SING N N 17
PLT C5A O4P SING N N 18
PLT C5A H5A1 SING N N 19
PLT C5A H5A2 SING N N 20
PLT O4P P SING N N 21
PLT P O1P DOUB N N 22
PLT P O2P SING N N 23
PLT P O3P SING N N 24
PLT O2P HOP2 SING N N 25
PLT O3P HOP3 SING N N 26
PLT N CA SING N N 27
PLT CA C SING N N 28
PLT CA CB SING N N 29
PLT CA HA SING N N 30
PLT C O DOUB N N 31
PLT C OXT SING N N 32
PLT OXT HXT SING N N 33
PLT CB CG SING N N 34
PLT CB HB1 SING N N 35
PLT CB HB2 SING N N 36
PLT CG CD1 DOUB Y N 37
PLT CG CD2 SING Y N 38
PLT CD1 NE1 SING Y N 39
PLT CD1 HD1 SING N N 40
PLT NE1 CE2 SING Y N 41
PLT NE1 HNE SING N N 42
PLT CE2 CZ2 DOUB Y N 43
PLT CE2 CD2 SING Y N 44
PLT CZ2 CH2 SING Y N 45
PLT CZ2 HZ2 SING N N 46
PLT CH2 CZ3 DOUB Y N 47
PLT CH2 HH2 SING N N 48
PLT CZ3 CE3 SING Y N 49
PLT CZ3 HZ3 SING N N 50
PLT CE3 CD2 DOUB Y N 51
PLT CE3 HE3 SING N N 52
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
PLT SMILES ACDLabs 10.04 O=P(O)(O)OCc1cnc(c(O)c1/C=N/C(C(=O)O)Cc3c2ccccc2nc3)C
PLT SMILES_CANONICAL CACTVS 3.341 Cc1ncc(CO[P](O)(O)=O)c(C=N[C@@H](Cc2c[nH]c3ccccc23)C(O)=O)c1O
PLT SMILES CACTVS 3.341 Cc1ncc(CO[P](O)(O)=O)c(C=N[CH](Cc2c[nH]c3ccccc23)C(O)=O)c1O
PLT SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 Cc1c(c(c(cn1)COP(=O)(O)O)\C=N\[C@@H](Cc2c[nH]c3c2cccc3)C(=O)O)O
PLT SMILES "OpenEye OEToolkits" 1.5.0 Cc1c(c(c(cn1)COP(=O)(O)O)C=NC(Cc2c[nH]c3c2cccc3)C(=O)O)O
PLT InChI InChI 1.03 InChI=1S/C19H20N3O7P/c1-11-18(23)15(13(8-20-11)10-29-30(26,27)28)9-22-17(19(24)25)6-12-7-21-16-5-3-2-4-14(12)16/h2-5,7-9,17,21,23H,6,10H2,1H3,(H,24,25)(H2,26,27,28)/b22-9+/t17-/m0/s1
PLT InChIKey InChI 1.03 MFRRQHVPLFTBMS-NUYDQDRBSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
PLT "SYSTEMATIC NAME" ACDLabs 10.04 (E)-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-tryptophan
PLT "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S)-2-[[3-hydroxy-2-methyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]-3-(1H-indol-3-yl)propanoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
PLT 'Create component' 1999-07-08 RCSB
PLT 'Modify descriptor' 2011-06-04 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
PLT N1 N -5.397 2.218 1
PLT C2 C -5.401 0.717 2
PLT C2A C -6.701 -0.029 3
PLT C3 C -4.103 -0.035 4
PLT O3 O -4.109 -1.536 5
PLT C4 C -2.803 0.711 6
PLT C4A C -1.504 -0.041 7
PLT C5 C -2.799 2.211 8
PLT C6 C -4.097 2.964 9
PLT C5A C -1.499 2.958 10
PLT O4P O -1.495 4.458 11
PLT P P -0.194 5.205 12
PLT O1P O 1.107 5.952 13
PLT O2P O -0.941 6.506 14
PLT O3P O 0.553 3.904 15
PLT N N -0.204 0.706 16
PLT CA C 1.094 -0.047 17
PLT C C 2.394 0.700 18
PLT O O 2.397 2.200 19
PLT OXT O 3.691 -0.052 20
PLT CB C 1.091 -1.547 21
PLT CG C 2.387 -2.299 22
PLT CD1 C 3.760 -1.693 23
PLT NE1 N 4.760 -2.809 24
PLT CE2 C 4.008 -4.109 25
PLT CZ2 C 4.467 -5.533 26
PLT CH2 C 3.463 -6.649 27
PLT CZ3 C 1.997 -6.332 28
PLT CE3 C 1.534 -4.906 29
PLT CD2 C 2.542 -3.792 30
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
PLT N1 C2 DOUBLE NONE 1
PLT N1 C6 SINGLE NONE 2
PLT C2 C2A SINGLE NONE 3
PLT C2 C3 SINGLE NONE 4
PLT C3 O3 SINGLE NONE 5
PLT C3 C4 DOUBLE NONE 6
PLT C4 C4A SINGLE ENDUPRIGHT 7
PLT C4 C5 SINGLE NONE 8
PLT C4A N DOUBLE NONE 9
PLT C5 C6 DOUBLE NONE 10
PLT C5 C5A SINGLE NONE 11
PLT C5A O4P SINGLE NONE 12
PLT O4P P SINGLE NONE 13
PLT P O1P DOUBLE NONE 14
PLT P O2P SINGLE NONE 15
PLT P O3P SINGLE NONE 16
PLT N CA SINGLE ENDUPRIGHT 17
PLT CA C SINGLE NONE 18
PLT CA CB SINGLE BEGINDASH 19
PLT C O DOUBLE NONE 20
PLT C OXT SINGLE NONE 21
PLT CB CG SINGLE NONE 22
PLT CG CD1 DOUBLE NONE 23
PLT CG CD2 SINGLE NONE 24
PLT CD1 NE1 SINGLE NONE 25
PLT NE1 CE2 SINGLE NONE 26
PLT CE2 CZ2 SINGLE NONE 27
PLT CE2 CD2 DOUBLE NONE 28
PLT CZ2 CH2 DOUBLE NONE 29
PLT CH2 CZ3 SINGLE NONE 30
PLT CZ3 CE3 DOUBLE NONE 31
PLT CE3 CD2 SINGLE NONE 32
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
PLT MurckoScaffold S1 scaffold 'C(=N/CCc1c[nH]c2ccccc12)\c1ccncc1' InChI=1S/C16H15N3/c1-2-4-16-15(3-1)14(12-19-16)7-10-18-11-13-5-8-17-9-6-13/h1-6,8-9,11-12,19H,7,10H2/b18-11+ LVPZGDMAABIUFX-WOJGMQOQSA-N
PLT indole F1 fragment 'c1ccc2[nH]ccc2c1' InChI=1S/C8H7N/c1-2-4-8-7(3-1)5-6-9-8/h1-6,9H SIKJAQJRHWYJAI-UHFFFAOYSA-N
PLT peptide F2 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
PLT phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
PLT phosphate F4 fragment O=P(O)(O)O InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4) NBIIXXVUZAFLBC-UHFFFAOYSA-N
PLT pyridine F5 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
PLT pyrrole F6 fragment 'c1cc[nH]c1' InChI=1S/C4H5N/c1-2-4-5-3-1/h1-5H KAESVJOAVNADME-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
PLT N1 S1 1
PLT C2 S1 1
PLT C3 S1 1
PLT C4 S1 1
PLT C4A S1 1
PLT C5 S1 1
PLT C6 S1 1
PLT N S1 1
PLT CA S1 1
PLT CB S1 1
PLT CG S1 1
PLT CD1 S1 1
PLT NE1 S1 1
PLT CE2 S1 1
PLT CZ2 S1 1
PLT CH2 S1 1
PLT CZ3 S1 1
PLT CE3 S1 1
PLT CD2 S1 1
PLT CE2 F1 1
PLT CD2 F1 1
PLT CG F1 1
PLT CD1 F1 1
PLT NE1 F1 1
PLT CE3 F1 1
PLT CZ3 F1 1
PLT CH2 F1 1
PLT CZ2 F1 1
PLT O F2 1
PLT C F2 1
PLT CA F2 1
PLT N F2 1
PLT CE2 F3 1
PLT CZ2 F3 1
PLT CH2 F3 1
PLT CZ3 F3 1
PLT CE3 F3 1
PLT CD2 F3 1
PLT O4P F4 1
PLT P F4 1
PLT O1P F4 1
PLT O2P F4 1
PLT O3P F4 1
PLT C2 F5 1
PLT C3 F5 1
PLT C4 F5 1
PLT C5 F5 1
PLT C6 F5 1
PLT N1 F5 1
PLT CD1 F6 1
PLT CG F6 1
PLT CD2 F6 1
PLT CE2 F6 1
PLT NE1 F6 1
#
_pdbe_chem_comp_rdkit_properties.comp_id PLT
_pdbe_chem_comp_rdkit_properties.exactmw 433.104
_pdbe_chem_comp_rdkit_properties.amw 433.357
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 10
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 5
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 12
_pdbe_chem_comp_rdkit_properties.NumHBD 5
_pdbe_chem_comp_rdkit_properties.NumHBA 9
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 30
_pdbe_chem_comp_rdkit_properties.NumAtoms 50
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 11
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.211
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 199.190
_pdbe_chem_comp_rdkit_properties.tpsa 165.330
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.191
_pdbe_chem_comp_rdkit_properties.CrippenMR 104.612
_pdbe_chem_comp_rdkit_properties.chi0v 15.041
_pdbe_chem_comp_rdkit_properties.chi1v 8.849
_pdbe_chem_comp_rdkit_properties.chi2v 3.460
_pdbe_chem_comp_rdkit_properties.chi3v 3.460
_pdbe_chem_comp_rdkit_properties.chi4v 2.119
_pdbe_chem_comp_rdkit_properties.chi0n 34.147
_pdbe_chem_comp_rdkit_properties.chi1n 16.969
_pdbe_chem_comp_rdkit_properties.chi2n 3.145
_pdbe_chem_comp_rdkit_properties.chi3n 3.145
_pdbe_chem_comp_rdkit_properties.chi4n 1.916
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.040
_pdbe_chem_comp_rdkit_properties.kappa1 7.580
_pdbe_chem_comp_rdkit_properties.kappa2 8.763
_pdbe_chem_comp_rdkit_properties.kappa3 5.109
_pdbe_chem_comp_rdkit_properties.Phi 2.214
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
PLT UniChem PDBe PLT
PLT UniChem ZINC ZINC000038160238
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
PLT N1 -5.186 -2.019 -0.411 ETKDGv3 1
PLT C2 -4.199 -2.775 -0.793 ETKDGv3 2
PLT C2A -4.441 -4.242 -0.981 ETKDGv3 3
PLT C3 -2.861 -2.173 -1.045 ETKDGv3 4
PLT O3 -1.803 -2.969 -1.494 ETKDGv3 5
PLT C4 -2.685 -0.844 -0.854 ETKDGv3 6
PLT C4A -1.371 -0.194 -1.093 ETKDGv3 7
PLT C5 -3.847 -0.013 -0.405 ETKDGv3 8
PLT C6 -5.035 -0.608 -0.210 ETKDGv3 9
PLT C5A -3.711 1.473 -0.145 ETKDGv3 10
PLT O4P -2.687 1.736 0.791 ETKDGv3 11
PLT P -3.300 1.583 2.378 ETKDGv3 12
PLT O1P -3.747 0.161 2.633 ETKDGv3 13
PLT O2P -2.073 1.972 3.476 ETKDGv3 14
PLT O3P -4.605 2.636 2.613 ETKDGv3 15
PLT N -0.258 -0.853 -0.974 ETKDGv3 16
PLT CA 1.056 -0.237 -1.145 ETKDGv3 17
PLT C 2.078 -1.325 -1.305 ETKDGv3 18
PLT O 2.938 -1.253 -2.223 ETKDGv3 19
PLT OXT 2.101 -2.397 -0.417 ETKDGv3 20
PLT CB 1.387 0.650 0.071 ETKDGv3 21
PLT CG 2.667 1.409 -0.129 ETKDGv3 22
PLT CD1 2.808 2.530 -0.837 ETKDGv3 23
PLT NE1 4.181 2.919 -0.894 ETKDGv3 24
PLT CE2 4.854 1.905 -0.164 ETKDGv3 25
PLT CZ2 6.303 1.782 0.065 ETKDGv3 26
PLT CH2 6.748 0.722 0.764 ETKDGv3 27
PLT CZ3 5.788 -0.296 1.286 ETKDGv3 28
PLT CE3 4.468 -0.164 1.064 ETKDGv3 29
PLT CD2 4.005 1.006 0.296 ETKDGv3 30
PLT H2A1 -4.260 -4.519 -2.040 ETKDGv3 31
PLT H2A2 -3.762 -4.822 -0.321 ETKDGv3 32
PLT H2A3 -5.489 -4.506 -0.723 ETKDGv3 33
PLT HO3 -1.895 -3.963 -1.656 ETKDGv3 34
PLT H4A -1.336 0.864 -1.318 ETKDGv3 35
PLT H6 -5.894 -0.038 0.119 ETKDGv3 36
PLT H5A1 -3.433 1.959 -1.103 ETKDGv3 37
PLT H5A2 -4.679 1.948 0.138 ETKDGv3 38
PLT HOP2 -1.769 2.874 3.205 ETKDGv3 39
PLT HOP3 -4.249 3.532 2.387 ETKDGv3 40
PLT HA 1.046 0.387 -2.068 ETKDGv3 41
PLT HXT 2.797 -3.128 -0.503 ETKDGv3 42
PLT HB1 0.567 1.382 0.234 ETKDGv3 43
PLT HB2 1.458 0.029 0.990 ETKDGv3 44
PLT HD1 2.005 3.063 -1.329 ETKDGv3 45
PLT HNE 4.596 3.734 -1.397 ETKDGv3 46
PLT HZ2 6.991 2.523 -0.320 ETKDGv3 47
PLT HH2 7.807 0.602 0.949 ETKDGv3 48
PLT HZ3 6.159 -1.144 1.846 ETKDGv3 49
PLT HE3 3.767 -0.898 1.437 ETKDGv3 50
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