data_Q38
#
_chem_comp.id Q38
_chem_comp.name "Carborane nido-pentyl-sulfonamide"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C7 H12 B9 N O2 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2020-05-07
_chem_comp.pdbx_modified_date 2020-10-23
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 271.540
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code Q38
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6YZU
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
Q38 C2 C1 C 0 1 N N N N N N -6.145 5.283 16.070 -6.145 5.283 16.070 C2 Q38 1
Q38 C6 C2 C 0 1 N N N N N N -5.429 3.988 15.680 -5.429 3.988 15.680 C6 Q38 2
Q38 C9 C3 C 0 1 N N N N N N -4.558 6.760 14.618 -4.558 6.760 14.618 C9 Q38 3
Q38 C10 C4 C 0 1 N N N N N N -4.494 7.700 13.404 -4.494 7.700 13.404 C10 Q38 4
Q38 O11 O1 O 0 1 N N N N N N -5.382 2.783 18.008 -5.382 2.783 18.008 O11 Q38 5
Q38 S8 S1 S 0 1 N N N N N N -5.931 2.602 16.684 -5.931 2.602 16.684 S8 Q38 6
Q38 O5 O2 O 0 1 N N N N N N -7.396 2.618 16.607 -7.396 2.618 16.607 O5 Q38 7
Q38 N4 N1 N 0 1 N N N N N N -5.379 1.277 15.983 -5.379 1.277 15.983 N4 Q38 8
Q38 C1 C5 C 0 1 N N N N N N -5.989 6.344 14.988 -5.989 6.344 14.988 C1 Q38 9
Q38 C7 C6 C 0 1 N N N N N N -3.215 8.518 13.263 -3.215 8.518 13.263 C7 Q38 10
Q38 B5 B1 B 0 1 N N N N N N -1.989 8.009 12.218 -1.989 8.009 12.218 B5 Q38 11
Q38 B6 B2 B 0 1 N N N N N N -0.503 8.723 12.860 -0.503 8.723 12.860 B6 Q38 12
Q38 B9 B3 B 0 1 N N N N N N -0.918 9.617 14.356 -0.918 9.617 14.356 B9 Q38 13
Q38 B4 B4 B 0 1 N N N N N N -1.703 8.034 13.989 -1.703 8.034 13.989 B4 Q38 14
Q38 B1 B5 B 0 1 N N N N N N -2.022 10.958 13.938 -2.022 10.958 13.938 B1 Q38 15
Q38 B10 B6 B 0 1 N N N N N N -0.690 10.516 12.833 -0.690 10.516 12.833 B10 Q38 16
Q38 C3 C7 C 0 1 N N R N N N -2.586 9.437 14.512 -2.586 9.437 14.512 C3 Q38 17
Q38 B7 B7 B 0 1 N N N N N N -1.361 9.527 11.501 -1.361 9.527 11.501 B7 Q38 18
Q38 B3 B8 B 0 1 N N N N N N -3.104 9.350 11.802 -3.104 9.350 11.802 B3 Q38 19
Q38 B8 B9 B 0 1 N N N N N N -2.312 10.905 12.166 -2.312 10.905 12.166 B8 Q38 20
Q38 H1 H1 H 0 1 N N N N N N -7.215 5.072 16.215 -7.215 5.072 16.215 H1 Q38 21
Q38 H2 H2 H 0 1 N N N N N N -5.716 5.662 17.009 -5.716 5.662 17.009 H2 Q38 22
Q38 H3 H3 H 0 1 N N N N N N -5.656 3.762 14.628 -5.656 3.762 14.628 H3 Q38 23
Q38 H4 H4 H 0 1 N N N N N N -4.345 4.135 15.798 -4.345 4.135 15.798 H4 Q38 24
Q38 H5 H5 H 0 1 N N N N N N -3.979 5.853 14.389 -3.979 5.853 14.389 H5 Q38 25
Q38 H6 H6 H 0 1 N N N N N N -4.109 7.273 15.481 -4.109 7.273 15.481 H6 Q38 26
Q38 H7 H7 H 0 1 N N N N N N -4.604 7.087 12.497 -4.604 7.087 12.497 H7 Q38 27
Q38 H8 H8 H 0 1 N N N N N N -5.337 8.403 13.477 -5.337 8.403 13.477 H8 Q38 28
Q38 H9 H9 H 0 1 N N N N N N -5.644 0.478 16.523 -5.644 0.478 16.523 H9 Q38 29
Q38 H10 H10 H 0 1 N N N N N N -5.765 1.201 15.064 -5.765 1.201 15.064 H10 Q38 30
Q38 H11 H11 H 0 1 N N N N N N -6.469 5.960 14.076 -6.469 5.960 14.076 H11 Q38 31
Q38 H12 H12 H 0 1 N N N N N N -6.519 7.246 15.329 -6.519 7.246 15.329 H12 Q38 32
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
Q38 C2 C6 SING N N 1
Q38 C2 C1 SING N N 2
Q38 C6 S8 SING N N 3
Q38 C9 C10 SING N N 4
Q38 C9 C1 SING N N 5
Q38 C10 C7 SING N N 6
Q38 O11 S8 DOUB N N 7
Q38 S8 O5 DOUB N N 8
Q38 S8 N4 SING N N 9
Q38 C7 B5 SING N N 10
Q38 C7 C3 SING N N 11
Q38 C7 B3 SING N N 12
Q38 B5 B6 SING N N 13
Q38 B5 B4 SING N N 14
Q38 B5 B7 SING N N 15
Q38 B5 B3 SING N N 16
Q38 B6 B9 SING N N 17
Q38 B6 B4 SING N N 18
Q38 B9 B1 SING N N 19
Q38 B9 B10 SING N N 20
Q38 B9 C3 SING N N 21
Q38 B4 C3 SING N N 22
Q38 B1 B10 SING N N 23
Q38 B1 C3 SING N N 24
Q38 B10 B7 SING N N 25
Q38 B7 B3 SING N N 26
Q38 B3 B8 SING N N 27
Q38 C2 H1 SING N N 28
Q38 C2 H2 SING N N 29
Q38 C6 H3 SING N N 30
Q38 C6 H4 SING N N 31
Q38 C9 H5 SING N N 32
Q38 C9 H6 SING N N 33
Q38 C10 H7 SING N N 34
Q38 C10 H8 SING N N 35
Q38 N4 H9 SING N N 36
Q38 N4 H10 SING N N 37
Q38 C1 H11 SING N N 38
Q38 C1 H12 SING N N 39
Q38 B7 B8 SING N N 40
Q38 B9 B4 SING N N 41
Q38 B1 B8 SING N N 42
Q38 B6 B10 SING N N 43
Q38 C7 B4 SING N N 44
Q38 B6 B7 SING N N 45
Q38 B10 B8 SING N N 46
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
Q38 InChI InChI 1.03 InChI=1S/C7H12B9NO2S/c17-20(18,19)5-3-1-2-4-7-6-8-10-9(7)13(7)11(6,7)12(6,8)14(8,10)15(9,10,13)16(11,12,13)14/h1-5H2,(H2,17,18,19)
Q38 InChIKey InChI 1.03 GTLHEFZDKOVWKR-UHFFFAOYSA-N
Q38 SMILES_CANONICAL CACTVS 3.385 N[S](=O)(=O)CCCCC[C+]123[B-]45[B+]67[B-]89[C@]1%10[B]8%11%12[B]69%13[B]47%14[B]25%15[B]3%10%11[B]%12%13%14%15
Q38 SMILES CACTVS 3.385 N[S](=O)(=O)CCCCC[C+]123[B-]45[B+]67[B-]89[C]1%10[B]8%11%12[B]69%13[B]47%14[B]25%15[B]3%10%11[B]%12%13%14%15
Q38 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 B123B45B167B289B31B823B966B744B622[C@]45C321CCCCCS(=O)(=O)N
Q38 SMILES "OpenEye OEToolkits" 2.0.7 B123B45B167B289B31B823B966B744B622C45C321CCCCCS(=O)(=O)N
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
Q38 'Create component' 2020-05-07 PDBE
Q38 'Initial release' 2020-10-28 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
Q38 C2 C -4.536 -0.276 1
Q38 C6 C -6.016 -0.971 2
Q38 C9 C -1.512 -0.352 3
Q38 C10 C 0.042 -1.248 4
Q38 O11 O -6.519 1.154 5
Q38 S8 S -7.347 -0.080 6
Q38 O5 O -8.228 -1.312 7
Q38 N4 N -8.601 0.788 8
Q38 C1 C -3.091 -1.131 9
Q38 C7 C 2.670 -0.346 10
Q38 B5 B 3.401 0.077 11
Q38 B6 B 4.145 0.096 12
Q38 B9 B 4.874 -0.055 13
Q38 B4 B 3.987 -1.660 14
Q38 B1 B 5.810 0.966 15
Q38 B10 B 4.599 0.780 16
Q38 C3 C 5.520 -0.601 17
Q38 B7 B 3.820 0.850 18
Q38 B3 B 2.659 1.249 19
Q38 B8 B 4.322 2.072 20
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
Q38 C2 C6 SINGLE NONE 1
Q38 C2 C1 SINGLE NONE 2
Q38 C6 S8 SINGLE NONE 3
Q38 C9 C10 SINGLE NONE 4
Q38 C9 C1 SINGLE NONE 5
Q38 C10 C7 SINGLE NONE 6
Q38 O11 S8 DOUBLE NONE 7
Q38 S8 O5 DOUBLE NONE 8
Q38 S8 N4 SINGLE NONE 9
Q38 C7 B5 SINGLE NONE 10
Q38 C7 C3 SINGLE NONE 11
Q38 C7 B3 SINGLE NONE 12
Q38 B5 B6 SINGLE NONE 13
Q38 B5 B4 SINGLE NONE 14
Q38 B5 B7 SINGLE NONE 15
Q38 B5 B3 SINGLE NONE 16
Q38 B6 B9 SINGLE NONE 17
Q38 B6 B4 SINGLE NONE 18
Q38 B9 B1 SINGLE NONE 19
Q38 B9 B10 SINGLE NONE 20
Q38 B9 C3 SINGLE NONE 21
Q38 B4 C3 SINGLE NONE 22
Q38 B1 B10 SINGLE NONE 23
Q38 B1 C3 SINGLE NONE 24
Q38 B10 B7 SINGLE NONE 25
Q38 B7 B3 SINGLE NONE 26
Q38 B3 B8 SINGLE NONE 27
Q38 B7 B8 SINGLE NONE 28
Q38 B9 B4 SINGLE NONE 29
Q38 B1 B8 SINGLE NONE 30
Q38 B6 B10 SINGLE NONE 31
Q38 C7 B4 SINGLE NONE 32
Q38 B6 B7 SINGLE NONE 33
Q38 B10 B8 SINGLE NONE 34
#
#
#
_pdbe_chem_comp_rdkit_properties.comp_id Q38
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
Q38 UniChem PDBe Q38
Q38 UniChem PDBe Q4B
#