data_Q4J
#
_chem_comp.id Q4J
_chem_comp.name Pralsetinib
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C27 H32 F N9 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms
"BLU-667; trans-N-{(1S)-1-[6-(4-fluoro-1H-pyrazol-1-yl)pyridin-3-yl]ethyl}-1-methoxy-4-{4-methyl-6-[(5-methyl-1H-pyrazol-3-yl)amino]pyrimidin-2-yl}cyclohexane-1-carboxamide"
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2019-09-20
_chem_comp.pdbx_modified_date 2021-03-13
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 533.600
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code Q4J
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6UDH
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
Q4J CAA C1 C 0 1 Y N N N N N 5.376 1.574 -2.215 -2.635 -4.169 -0.996 CAA Q4J 1
Q4J CBA C2 C 0 1 N N N N N N 13.044 5.545 -7.785 1.510 1.142 -3.120 CBA Q4J 2
Q4J CAB C3 C 0 1 Y N N N N N 5.534 0.256 -1.983 -1.444 -3.829 -1.540 CAB Q4J 3
Q4J CBB C4 C 0 1 Y N N N N N 13.073 2.921 -8.876 2.965 -1.052 -0.981 CBB Q4J 4
Q4J CBC C5 C 0 1 Y N N N N N 13.131 1.643 -9.392 4.182 -1.355 -0.396 CBC Q4J 5
Q4J CBD C6 C 0 1 Y N N N N N 11.955 0.932 -9.597 4.973 -0.323 0.094 CBD Q4J 6
Q4J CBM C7 C 0 1 N N N N N N 6.529 -0.693 -2.575 -0.476 -4.766 -2.215 CBM Q4J 7
Q4J NAC N1 N 0 1 Y N N N N N 4.679 -0.164 -1.083 -1.276 -2.500 -1.371 NAC Q4J 8
Q4J NAD N2 N 0 1 Y N N N N N 3.950 0.897 -0.744 -2.401 -2.002 -0.701 NAD Q4J 9
Q4J CAE C8 C 0 1 Y N N N N N 4.346 1.982 -1.422 -3.218 -3.003 -0.474 CAE Q4J 10
Q4J NAF N3 N 0 1 N N N N N N 3.708 3.174 -1.217 -4.457 -2.923 0.175 NAF Q4J 11
Q4J C6 C9 C 0 1 Y N N N N N 3.995 4.330 -1.777 -4.869 -1.725 0.737 C6 Q4J 12
Q4J N1 N4 N 0 1 Y N N N N N 5.082 4.485 -2.546 -4.149 -0.619 0.572 N1 Q4J 13
Q4J C5 C10 C 0 1 Y N N N N N 3.191 5.442 -1.584 -6.049 -1.659 1.481 C5 Q4J 14
Q4J C4 C11 C 0 1 Y N N N N N 3.570 6.659 -2.125 -6.416 -0.442 2.021 C4 Q4J 15
Q4J CAM C12 C 0 1 N N N N N N 2.730 7.803 -1.919 -7.680 -0.317 2.832 CAM Q4J 16
Q4J N3 N5 N 0 1 Y N N N N N 4.669 6.739 -2.915 -5.643 0.616 1.817 N3 Q4J 17
Q4J C2 C13 C 0 1 Y N N N N N 5.415 5.632 -3.141 -4.541 0.523 1.101 C2 Q4J 18
Q4J CAN C14 C 0 1 N N N N N N 6.723 5.560 -3.759 -3.694 1.753 0.896 CAN Q4J 19
Q4J CAS C15 C 0 1 N N N N N N 7.017 4.401 -4.677 -2.295 1.509 1.466 CAS Q4J 20
Q4J CAR C16 C 0 1 N N N N N N 8.102 4.750 -5.718 -1.436 2.758 1.258 CAR Q4J 21
Q4J CAO C17 C 0 1 N N N N N N 7.309 6.814 -4.212 -3.590 2.058 -0.599 CAO Q4J 22
Q4J CAP C18 C 0 1 N N N N N N 8.864 6.750 -4.376 -2.731 3.307 -0.807 CAP Q4J 23
Q4J CAQ C19 C 0 1 N N N N N N 9.330 5.451 -5.093 -1.332 3.063 -0.237 CAQ Q4J 24
Q4J OAU O1 O 0 1 N N N N N N 9.933 4.555 -4.186 -0.529 4.229 -0.431 OAU Q4J 25
Q4J CAV C20 C 0 1 N N N N N N 11.102 4.928 -3.465 -0.460 4.669 -1.789 CAV Q4J 26
Q4J CAT C21 C 0 1 N N N N N N 10.232 5.688 -6.276 -0.698 1.894 -0.946 CAT Q4J 27
Q4J OAX O2 O 0 1 N N N N N N 10.114 6.703 -6.951 -1.391 1.101 -1.547 OAX Q4J 28
Q4J NAW N6 N 0 1 N N N N N N 10.954 4.667 -6.682 0.639 1.729 -0.911 NAW Q4J 29
Q4J CAY C22 C 0 1 N N S N N N 11.718 4.772 -7.982 1.266 0.658 -1.689 CAY Q4J 30
Q4J CAZ C23 C 0 1 Y N N N N N 11.860 3.499 -8.507 2.580 0.279 -1.056 CAZ Q4J 31
Q4J CBF C24 C 0 1 Y N N N N N 10.711 2.789 -8.726 3.414 1.254 -0.543 CBF Q4J 32
Q4J NBE N7 N 0 1 Y N N N N N 10.787 1.492 -9.256 4.571 0.935 0.004 NBE Q4J 33
Q4J NBG N8 N 0 1 Y N N N N N 12.003 -0.334 -10.038 6.204 -0.616 0.688 NBG Q4J 34
Q4J NBH N9 N 0 1 Y N N N N N 13.045 -0.947 -10.366 6.761 -1.891 0.848 NBH Q4J 35
Q4J CBI C25 C 0 1 Y N N N N N 12.816 -2.206 -10.612 7.921 -1.762 1.440 CBI Q4J 36
Q4J CBJ C26 C 0 1 Y N N N N N 11.523 -2.362 -10.407 8.145 -0.400 1.678 CBJ Q4J 37
Q4J FBL F1 F 0 1 N N N N N N 10.885 -3.485 -10.578 9.235 0.134 2.273 FBL Q4J 38
Q4J CBK C27 C 0 1 Y N N N N N 11.006 -1.211 -10.002 7.078 0.288 1.209 CBK Q4J 39
Q4J H1 H1 H 0 1 N N N N N N 5.951 2.185 -2.894 -3.062 -5.160 -0.972 H1 Q4J 40
Q4J H2 H2 H 0 1 N N N N N N 12.831 6.539 -7.366 2.168 2.011 -3.102 H2 Q4J 41
Q4J H3 H3 H 0 1 N N N N N N 13.694 4.988 -7.094 1.976 0.345 -3.699 H3 Q4J 42
Q4J H4 H4 H 0 1 N N N N N N 13.551 5.657 -8.755 0.560 1.416 -3.578 H4 Q4J 43
Q4J H5 H5 H 0 1 N N N N N N 13.986 3.485 -8.756 2.332 -1.833 -1.375 H5 Q4J 44
Q4J H6 H6 H 0 1 N N N N N N 14.085 1.198 -9.635 4.513 -2.381 -0.321 H6 Q4J 45
Q4J H7 H7 H 0 1 N N N N N N 7.442 -0.698 -1.962 -0.705 -4.819 -3.280 H7 Q4J 46
Q4J H8 H8 H 0 1 N N N N N N 6.100 -1.705 -2.601 0.541 -4.398 -2.079 H8 Q4J 47
Q4J H9 H9 H 0 1 N N N N N N 6.776 -0.374 -3.598 -0.566 -5.759 -1.774 H9 Q4J 48
Q4J H10 H10 H 0 1 N N N N N N 4.592 -1.093 -0.724 -0.511 -1.981 -1.663 H10 Q4J 49
Q4J H11 H11 H 0 1 N N N N N N 2.942 3.167 -0.574 -5.027 -3.706 0.231 H11 Q4J 50
Q4J H12 H12 H 0 1 N N N N N N 2.276 5.360 -1.016 -6.659 -2.537 1.630 H12 Q4J 51
Q4J H13 H13 H 0 1 N N N N N N 3.132 8.659 -2.481 -7.458 -0.507 3.882 H13 Q4J 52
Q4J H14 H14 H 0 1 N N N N N N 1.712 7.579 -2.271 -8.085 0.689 2.722 H14 Q4J 53
Q4J H15 H15 H 0 1 N N N N N N 2.702 8.049 -0.847 -8.412 -1.044 2.478 H15 Q4J 54
Q4J H16 H16 H 0 1 N N N N N N 7.362 5.317 -2.897 -4.153 2.599 1.409 H16 Q4J 55
Q4J H17 H17 H 0 1 N N N N N N 6.093 4.123 -5.206 -2.369 1.292 2.531 H17 Q4J 56
Q4J H18 H18 H 0 1 N N N N N N 7.364 3.549 -4.074 -1.837 0.664 0.953 H18 Q4J 57
Q4J H19 H19 H 0 1 N N N N N N 7.662 5.418 -6.473 -1.894 3.604 1.771 H19 Q4J 58
Q4J H20 H20 H 0 1 N N N N N N 8.437 3.820 -6.202 -0.439 2.585 1.664 H20 Q4J 59
Q4J H21 H21 H 0 1 N N N N N N 7.068 7.597 -3.478 -3.132 1.212 -1.112 H21 Q4J 60
Q4J H22 H22 H 0 1 N N N N N N 6.866 7.074 -5.185 -4.587 2.231 -1.005 H22 Q4J 61
Q4J H23 H23 H 0 1 N N N N N N 9.327 6.789 -3.379 -2.657 3.524 -1.872 H23 Q4J 62
Q4J H24 H24 H 0 1 N N N N N N 9.193 7.617 -4.967 -3.189 4.153 -0.294 H24 Q4J 63
Q4J H25 H25 H 0 1 N N N N N N 11.414 4.097 -2.815 -0.127 3.845 -2.421 H25 Q4J 64
Q4J H26 H26 H 0 1 N N N N N N 11.910 5.162 -4.173 -1.446 5.000 -2.114 H26 Q4J 65
Q4J H27 H27 H 0 1 N N N N N N 10.886 5.813 -2.849 0.245 5.496 -1.868 H27 Q4J 66
Q4J H28 H28 H 0 1 N N N N N N 10.997 3.830 -6.137 1.187 2.320 -0.371 H28 Q4J 67
Q4J H29 H29 H 0 1 N N N N N N 11.103 5.371 -8.670 0.608 -0.211 -1.707 H29 Q4J 68
Q4J H30 H30 H 0 1 N N N N N N 9.751 3.225 -8.492 3.119 2.292 -0.599 H30 Q4J 69
Q4J H31 H31 H 0 1 N N N N N N 13.529 -2.957 -10.917 8.591 -2.567 1.700 H31 Q4J 70
Q4J H32 H32 H 0 1 N N N N N N 9.985 -1.024 -9.704 6.946 1.359 1.238 H32 Q4J 71
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
Q4J CBI CBJ SING Y N 1
Q4J CBI NBH DOUB Y N 2
Q4J FBL CBJ SING N N 3
Q4J CBJ CBK DOUB Y N 4
Q4J NBH NBG SING Y N 5
Q4J NBG CBK SING Y N 6
Q4J NBG CBD SING N N 7
Q4J CBD CBC DOUB Y N 8
Q4J CBD NBE SING Y N 9
Q4J CBC CBB SING Y N 10
Q4J NBE CBF DOUB Y N 11
Q4J CBB CAZ DOUB Y N 12
Q4J CBF CAZ SING Y N 13
Q4J CAZ CAY SING N N 14
Q4J CAY CBA SING N N 15
Q4J CAY NAW SING N N 16
Q4J OAX CAT DOUB N N 17
Q4J NAW CAT SING N N 18
Q4J CAT CAQ SING N N 19
Q4J CAR CAQ SING N N 20
Q4J CAR CAS SING N N 21
Q4J CAQ CAP SING N N 22
Q4J CAQ OAU SING N N 23
Q4J CAS CAN SING N N 24
Q4J CAP CAO SING N N 25
Q4J CAO CAN SING N N 26
Q4J OAU CAV SING N N 27
Q4J CAN C2 SING N N 28
Q4J C2 N3 DOUB Y N 29
Q4J C2 N1 SING Y N 30
Q4J N3 C4 SING Y N 31
Q4J CBM CAB SING N N 32
Q4J N1 C6 DOUB Y N 33
Q4J CAA CAB DOUB Y N 34
Q4J CAA CAE SING Y N 35
Q4J C4 CAM SING N N 36
Q4J C4 C5 DOUB Y N 37
Q4J CAB NAC SING Y N 38
Q4J C6 C5 SING Y N 39
Q4J C6 NAF SING N N 40
Q4J CAE NAF SING N N 41
Q4J CAE NAD DOUB Y N 42
Q4J NAC NAD SING Y N 43
Q4J CAA H1 SING N N 44
Q4J CBA H2 SING N N 45
Q4J CBA H3 SING N N 46
Q4J CBA H4 SING N N 47
Q4J CBB H5 SING N N 48
Q4J CBC H6 SING N N 49
Q4J CBM H7 SING N N 50
Q4J CBM H8 SING N N 51
Q4J CBM H9 SING N N 52
Q4J NAC H10 SING N N 53
Q4J NAF H11 SING N N 54
Q4J C5 H12 SING N N 55
Q4J CAM H13 SING N N 56
Q4J CAM H14 SING N N 57
Q4J CAM H15 SING N N 58
Q4J CAN H16 SING N N 59
Q4J CAS H17 SING N N 60
Q4J CAS H18 SING N N 61
Q4J CAR H19 SING N N 62
Q4J CAR H20 SING N N 63
Q4J CAO H21 SING N N 64
Q4J CAO H22 SING N N 65
Q4J CAP H23 SING N N 66
Q4J CAP H24 SING N N 67
Q4J CAV H25 SING N N 68
Q4J CAV H26 SING N N 69
Q4J CAV H27 SING N N 70
Q4J NAW H28 SING N N 71
Q4J CAY H29 SING N N 72
Q4J CBF H30 SING N N 73
Q4J CBI H31 SING N N 74
Q4J CBK H32 SING N N 75
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
Q4J SMILES ACDLabs 12.01 c1c(nnc1Nc2cc(C)nc(n2)C3CCC(CC3)(OC)C(=O)NC(C)c4ccc(nc4)n5cc(cn5)F)C
Q4J InChI InChI 1.03 InChI=1S/C27H32FN9O2/c1-16-11-22(33-23-12-17(2)35-36-23)34-25(31-16)19-7-9-27(39-4,10-8-19)26(38)32-18(3)20-5-6-24(29-13-20)37-15-21(28)14-30-37/h5-6,11-15,18-19H,7-10H2,1-4H3,(H,32,38)(H2,31,33,34,35,36)/t18-,19-,27-/m0/s1
Q4J InChIKey InChI 1.03 GBLBJPZSROAGMF-BATDWUPUSA-N
Q4J SMILES_CANONICAL CACTVS 3.385 CO[C@]1(CC[C@@H](CC1)c2nc(C)cc(Nc3cc(C)[nH]n3)n2)C(=O)N[C@@H](C)c4ccc(nc4)n5cc(F)cn5
Q4J SMILES CACTVS 3.385 CO[C]1(CC[CH](CC1)c2nc(C)cc(Nc3cc(C)[nH]n3)n2)C(=O)N[CH](C)c4ccc(nc4)n5cc(F)cn5
Q4J SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 Cc1cc(n[nH]1)Nc2cc(nc(n2)C3CCC(CC3)(C(=O)N[C@@H](C)c4ccc(nc4)n5cc(cn5)F)OC)C
Q4J SMILES "OpenEye OEToolkits" 2.0.7 Cc1cc(n[nH]1)Nc2cc(nc(n2)C3CCC(CC3)(C(=O)NC(C)c4ccc(nc4)n5cc(cn5)F)OC)C
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
Q4J "SYSTEMATIC NAME" ACDLabs 12.01 trans-N-{(1S)-1-[6-(4-fluoro-1H-pyrazol-1-yl)pyridin-3-yl]ethyl}-1-methoxy-4-{4-methyl-6-[(5-methyl-1H-pyrazol-3-yl)amino]pyrimidin-2-yl}cyclohexane-1-carboxamide
Q4J "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 ~{N}-[(1~{S})-1-[6-(4-fluoranylpyrazol-1-yl)pyridin-3-yl]ethyl]-1-methoxy-4-[4-methyl-6-[(5-methyl-1~{H}-pyrazol-3-yl)amino]pyrimidin-2-yl]cyclohexane-1-carboxamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
Q4J 'Create component' 2019-09-20 RCSB
Q4J 'Modify name' 2020-08-20 RCSB
Q4J 'Modify synonyms' 2020-08-20 RCSB
Q4J 'Initial release' 2020-11-11 RCSB
Q4J 'Modify synonyms' 2021-03-13 RCSB
#
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1 Q4J BLU-667 PDB ?
2 Q4J trans-N-{(1S)-1-[6-(4-fluoro-1H-pyrazol-1-yl)pyridin-3-yl]ethyl}-1-methoxy-4-{4-methyl-6-[(5-methyl-1H-pyrazol-3-yl)amino]pyrimidin-2-yl}cyclohexane-1-carboxamide PDB ?
#
loop_
_pdbe_chem_comp_synonyms.comp_id
_pdbe_chem_comp_synonyms.name
_pdbe_chem_comp_synonyms.provenance
_pdbe_chem_comp_synonyms.type
Q4J BLU-667 wwPDB ?
Q4J 'trans-N-{(1S)-1-[6-(4-fluoro-1H-pyrazol-1-yl)pyridin-3-yl]ethyl}-1-methoxy-4-{4-methyl-6-[(5-methyl-1H-pyrazol-3-yl)amino]pyrimidin-2-yl}cyclohexane-1-carboxamide' wwPDB ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
Q4J CAA C 2.028 -7.136 1
Q4J CBA C -1.655 5.707 2
Q4J CAB C 2.948 -8.319 3
Q4J CBB C -4.254 4.210 4
Q4J CBC C -5.555 3.462 5
Q4J CBD C -5.556 1.961 6
Q4J CBM C 2.535 -9.760 7
Q4J NAC N 4.359 -7.807 8
Q4J NAD N 4.307 -6.309 9
Q4J CAE C 2.866 -5.892 10
Q4J NAF N 2.355 -4.483 11
Q4J C6 C 3.321 -3.334 12
Q4J N1 N 2.807 -1.926 13
Q4J C5 C 4.797 -3.599 14
Q4J C4 C 5.764 -2.448 15
Q4J CAM C 7.240 -2.711 16
Q4J N3 N 5.250 -1.040 17
Q4J C2 C 3.775 -0.775 18
Q4J CAN C 3.262 0.631 19
Q4J CAS C 1.787 0.896 20
Q4J CAR C 1.273 2.304 21
Q4J CAO C 4.230 1.782 22
Q4J CAP C 3.716 3.190 23
Q4J CAQ C 2.240 3.455 24
Q4J OAU O 2.754 4.863 25
Q4J CAV C 4.232 5.121 26
Q4J CAT C 0.942 4.205 27
Q4J OAX O 0.943 5.705 28
Q4J NAW N -0.358 3.456 29
Q4J CAY C -1.656 4.207 30
Q4J CAZ C -2.956 3.460 31
Q4J CBF C -2.957 1.959 32
Q4J NBE N -4.257 1.211 33
Q4J NBG N -6.855 1.213 34
Q4J NBH N -7.013 -0.277 35
Q4J CBI C -8.481 -0.589 36
Q4J CBJ C -9.229 0.711 37
Q4J FBL F -10.722 0.869 38
Q4J CBK C -8.225 1.826 39
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
Q4J CBI CBJ SINGLE NONE 1
Q4J CBI NBH DOUBLE NONE 2
Q4J FBL CBJ SINGLE NONE 3
Q4J CBJ CBK DOUBLE NONE 4
Q4J NBH NBG SINGLE NONE 5
Q4J NBG CBK SINGLE NONE 6
Q4J NBG CBD SINGLE NONE 7
Q4J CBD CBC SINGLE NONE 8
Q4J CBD NBE DOUBLE NONE 9
Q4J CBC CBB DOUBLE NONE 10
Q4J NBE CBF SINGLE NONE 11
Q4J CBB CAZ SINGLE NONE 12
Q4J CBF CAZ DOUBLE NONE 13
Q4J CAZ CAY SINGLE NONE 14
Q4J CAY CBA SINGLE BEGINDASH 15
Q4J CAY NAW SINGLE NONE 16
Q4J OAX CAT DOUBLE NONE 17
Q4J NAW CAT SINGLE NONE 18
Q4J CAT CAQ SINGLE NONE 19
Q4J CAR CAQ SINGLE NONE 20
Q4J CAR CAS SINGLE NONE 21
Q4J CAQ CAP SINGLE NONE 22
Q4J CAQ OAU SINGLE BEGINDASH 23
Q4J CAS CAN SINGLE NONE 24
Q4J CAP CAO SINGLE NONE 25
Q4J CAO CAN SINGLE NONE 26
Q4J OAU CAV SINGLE NONE 27
Q4J CAN C2 SINGLE BEGINWEDGE 28
Q4J C2 N3 SINGLE NONE 29
Q4J C2 N1 DOUBLE NONE 30
Q4J N3 C4 DOUBLE NONE 31
Q4J CBM CAB SINGLE NONE 32
Q4J N1 C6 SINGLE NONE 33
Q4J CAA CAB DOUBLE NONE 34
Q4J CAA CAE SINGLE NONE 35
Q4J C4 CAM SINGLE NONE 36
Q4J C4 C5 SINGLE NONE 37
Q4J CAB NAC SINGLE NONE 38
Q4J C6 C5 DOUBLE NONE 39
Q4J C6 NAF SINGLE NONE 40
Q4J CAE NAF SINGLE NONE 41
Q4J CAE NAD DOUBLE NONE 42
Q4J NAC NAD SINGLE NONE 43
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
Q4J MurckoScaffold S1 scaffold 'O=C(NCc1ccc(-n2cccn2)nc1)C1CCC(c2nccc(Nc3cc[nH]n3)n2)CC1' InChI=1S/C23H25N9O/c33-23(26-15-16-2-7-21(25-14-16)32-13-1-10-28-32)18-5-3-17(4-6-18)22-24-11-8-19(30-22)29-20-9-12-27-31-20/h1-2,7-14,17-18H,3-6,15H2,(H,26,33)(H2,24,27,29,30,31) MDXDLDJIWIUBNE-UHFFFAOYSA-N
Q4J amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
Q4J cyclohexane F2 fragment C1CCCCC1 InChI=1S/C6H12/c1-2-4-6-5-3-1/h1-6H2 XDTMQSROBMDMFD-UHFFFAOYSA-N
Q4J pyrazole F3 fragment 'c1cn[nH]c1' InChI=1S/C3H4N2/c1-2-4-5-3-1/h1-3H,(H,4,5) WTKZEGDFNFYCGP-UHFFFAOYSA-N
Q4J pyridine F4 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
Q4J pyrimidine F5 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
Q4J Z234896993 F6 fragment Cc1cc(N)nc(C(C)C)n1 InChI=1S/C8H13N3/c1-5(2)8-10-6(3)4-7(9)11-8/h4-5H,1-3H3,(H2,9,10,11) XHGGSKDDBNJABS-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
Q4J CAA S1 1
Q4J CAB S1 1
Q4J CBB S1 1
Q4J CBC S1 1
Q4J CBD S1 1
Q4J NAC S1 1
Q4J NAD S1 1
Q4J CAE S1 1
Q4J NAF S1 1
Q4J C6 S1 1
Q4J N1 S1 1
Q4J C5 S1 1
Q4J C4 S1 1
Q4J N3 S1 1
Q4J C2 S1 1
Q4J CAN S1 1
Q4J CAS S1 1
Q4J CAR S1 1
Q4J CAO S1 1
Q4J CAP S1 1
Q4J CAQ S1 1
Q4J CAT S1 1
Q4J OAX S1 1
Q4J NAW S1 1
Q4J CAY S1 1
Q4J CAZ S1 1
Q4J CBF S1 1
Q4J NBE S1 1
Q4J NBG S1 1
Q4J NBH S1 1
Q4J CBI S1 1
Q4J CBJ S1 1
Q4J CBK S1 1
Q4J NAW F1 1
Q4J CAT F1 1
Q4J OAX F1 1
Q4J CAQ F1 1
Q4J CAN F2 1
Q4J CAS F2 1
Q4J CAR F2 1
Q4J CAQ F2 1
Q4J CAP F2 1
Q4J CAO F2 1
Q4J CAB F3 1
Q4J CAA F3 1
Q4J CAE F3 1
Q4J NAD F3 1
Q4J NAC F3 1
Q4J CBI F3 2
Q4J CBJ F3 2
Q4J CBK F3 2
Q4J NBG F3 2
Q4J NBH F3 2
Q4J CBD F4 1
Q4J CBC F4 1
Q4J CBB F4 1
Q4J CAZ F4 1
Q4J CBF F4 1
Q4J NBE F4 1
Q4J C5 F5 1
Q4J C4 F5 1
Q4J N3 F5 1
Q4J C2 F5 1
Q4J N1 F5 1
Q4J C6 F5 1
Q4J CAS F6 1
Q4J CAN F6 1
Q4J CAO F6 1
Q4J C2 F6 1
Q4J N3 F6 1
Q4J C4 F6 1
Q4J CAM F6 1
Q4J C5 F6 1
Q4J C6 F6 1
Q4J NAF F6 1
Q4J N1 F6 1
#
_pdbe_chem_comp_rdkit_properties.comp_id Q4J
_pdbe_chem_comp_rdkit_properties.exactmw 533.266
_pdbe_chem_comp_rdkit_properties.amw 533.612
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 11
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 12
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 9
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 39
_pdbe_chem_comp_rdkit_properties.NumAtoms 71
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 12
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.407
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 4
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 4
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 270.313
_pdbe_chem_comp_rdkit_properties.tpsa 135.530
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.030
_pdbe_chem_comp_rdkit_properties.CrippenMR 138.827
_pdbe_chem_comp_rdkit_properties.chi0v 18.719
_pdbe_chem_comp_rdkit_properties.chi1v 10.055
_pdbe_chem_comp_rdkit_properties.chi2v 4.427
_pdbe_chem_comp_rdkit_properties.chi3v 4.427
_pdbe_chem_comp_rdkit_properties.chi4v 2.708
_pdbe_chem_comp_rdkit_properties.chi0n 50.719
_pdbe_chem_comp_rdkit_properties.chi1n 25.897
_pdbe_chem_comp_rdkit_properties.chi2n 4.427
_pdbe_chem_comp_rdkit_properties.chi3n 4.427
_pdbe_chem_comp_rdkit_properties.chi4n 2.708
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -4.190
_pdbe_chem_comp_rdkit_properties.kappa1 7.936
_pdbe_chem_comp_rdkit_properties.kappa2 10.891
_pdbe_chem_comp_rdkit_properties.kappa3 5.799
_pdbe_chem_comp_rdkit_properties.Phi 2.216
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
Q4J UniChem PDBe Q4J
Q4J UniChem fdasrs 1WPE73O1WV
Q4J UniChem SureChEMBL SCHEMBL18806610
Q4J UniChem HMDB HMDB0304855
Q4J UniChem ChemicalBook CB04632289
Q4J UniChem DailyMed PRALSETINIB
Q4J UniChem rxnorm PRALSETINIB
Q4J UniChem MedChemExpress HY-112301A
Q4J UniChem 'Probes And Drugs' PD102090
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
Q4J CAA 8.431 -0.115 1.966 ETKDGv3 1
Q4J CBA -5.260 3.691 0.090 ETKDGv3 2
Q4J CAB 9.336 -1.073 1.834 ETKDGv3 3
Q4J CBB -5.650 0.551 -0.521 ETKDGv3 4
Q4J CBC -6.432 -0.532 -0.551 ETKDGv3 5
Q4J CBD -7.104 -0.981 0.693 ETKDGv3 6
Q4J CBM 10.603 -1.193 2.614 ETKDGv3 7
Q4J NAC 8.973 -1.917 0.752 ETKDGv3 8
Q4J NAD 7.767 -1.437 0.235 ETKDGv3 9
Q4J CAE 7.445 -0.386 0.919 ETKDGv3 10
Q4J NAF 6.238 0.364 0.722 ETKDGv3 11
Q4J C6 5.340 0.190 -0.385 ETKDGv3 12
Q4J N1 3.936 0.424 -0.183 ETKDGv3 13
Q4J C5 5.783 -0.116 -1.616 ETKDGv3 14
Q4J C4 4.801 -0.251 -2.711 ETKDGv3 15
Q4J CAM 5.258 -0.577 -4.096 ETKDGv3 16
Q4J N3 3.541 -0.028 -2.477 ETKDGv3 17
Q4J C2 3.081 0.327 -1.162 ETKDGv3 18
Q4J CAN 1.613 0.557 -0.921 ETKDGv3 19
Q4J CAS 1.007 -0.589 -0.076 ETKDGv3 20
Q4J CAR -0.265 -0.172 0.692 ETKDGv3 21
Q4J CAO 1.363 1.924 -0.263 ETKDGv3 22
Q4J CAP -0.143 2.228 -0.098 ETKDGv3 23
Q4J CAQ -1.056 0.966 -0.023 ETKDGv3 24
Q4J OAU -1.402 0.612 -1.364 ETKDGv3 25
Q4J CAV -2.182 -0.568 -1.458 ETKDGv3 26
Q4J CAT -2.308 1.359 0.752 ETKDGv3 27
Q4J OAX -2.485 0.944 1.931 ETKDGv3 28
Q4J NAW -3.277 2.230 0.149 ETKDGv3 29
Q4J CAY -4.565 2.518 0.788 ETKDGv3 30
Q4J CAZ -5.448 1.291 0.748 ETKDGv3 31
Q4J CBF -6.083 0.860 1.850 ETKDGv3 32
Q4J NBE -6.921 -0.308 1.794 ETKDGv3 33
Q4J NBG -7.950 -2.138 0.707 ETKDGv3 34
Q4J NBH -8.614 -2.609 1.847 ETKDGv3 35
Q4J CBI -9.282 -3.664 1.510 ETKDGv3 36
Q4J CBJ -9.080 -3.942 0.090 ETKDGv3 37
Q4J FBL -9.614 -4.962 -0.624 ETKDGv3 38
Q4J CBK -8.271 -3.007 -0.374 ETKDGv3 39
Q4J H1 8.442 0.700 2.679 ETKDGv3 40
Q4J H2 -4.615 4.595 0.141 ETKDGv3 41
Q4J H3 -6.223 3.919 0.595 ETKDGv3 42
Q4J H4 -5.459 3.455 -0.977 ETKDGv3 43
Q4J H5 -5.160 0.882 -1.428 ETKDGv3 44
Q4J H6 -6.566 -1.064 -1.482 ETKDGv3 45
Q4J H7 11.376 -0.532 2.169 ETKDGv3 46
Q4J H8 10.432 -0.898 3.671 ETKDGv3 47
Q4J H9 10.963 -2.242 2.588 ETKDGv3 48
Q4J H10 9.493 -2.747 0.389 ETKDGv3 49
Q4J H11 5.939 1.004 1.492 ETKDGv3 50
Q4J H12 6.838 -0.233 -1.825 ETKDGv3 51
Q4J H13 4.409 -0.948 -4.710 ETKDGv3 52
Q4J H14 5.677 0.334 -4.571 ETKDGv3 53
Q4J H15 6.039 -1.365 -4.063 ETKDGv3 54
Q4J H16 1.108 0.566 -1.913 ETKDGv3 55
Q4J H17 1.747 -0.961 0.667 ETKDGv3 56
Q4J H18 0.774 -1.441 -0.750 ETKDGv3 57
Q4J H19 -0.905 -1.065 0.859 ETKDGv3 58
Q4J H20 0.040 0.186 1.701 ETKDGv3 59
Q4J H21 1.833 2.728 -0.872 ETKDGv3 60
Q4J H22 1.847 1.939 0.740 ETKDGv3 61
Q4J H23 -0.256 2.845 0.823 ETKDGv3 62
Q4J H24 -0.477 2.868 -0.944 ETKDGv3 63
Q4J H25 -1.524 -1.460 -1.489 ETKDGv3 64
Q4J H26 -2.746 -0.539 -2.412 ETKDGv3 65
Q4J H27 -2.927 -0.679 -0.641 ETKDGv3 66
Q4J H28 -3.071 2.628 -0.796 ETKDGv3 67
Q4J H29 -4.373 2.829 1.840 ETKDGv3 68
Q4J H30 -5.971 1.379 2.794 ETKDGv3 69
Q4J H31 -9.890 -4.236 2.198 ETKDGv3 70
Q4J H32 -7.919 -2.922 -1.392 ETKDGv3 71
#