data_QEM # _chem_comp.id QEM _chem_comp.name 4-[(1R,2S)-3-(4-benzylpiperidin-1-yl)-1-hydroxy-2-methylpropyl]phenol _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H29 N O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-01-28 _chem_comp.pdbx_modified_date 2011-06-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 339.471 _chem_comp.one_letter_code ? _chem_comp.three_letter_code QEM _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3QEM _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal QEM C C C 0 1 Y N N N N N 18.084 -3.973 -32.949 -4.349 1.006 -1.337 C QEM 1 QEM N N N 0 1 N N N N N N 23.276 -5.225 -31.590 0.483 -1.659 0.018 N QEM 2 QEM O O O 0 1 N N N N N N 15.016 -1.843 -33.087 -6.829 2.888 0.545 O QEM 3 QEM C01 C01 C 0 1 Y N N N N N 29.038 -6.589 -32.076 4.881 1.640 0.922 C01 QEM 4 QEM O01 O01 O 0 1 N N N N N N 20.143 -3.663 -29.910 -3.704 -2.426 -0.513 O01 QEM 5 QEM C02 C02 C 0 1 Y N N N N N 27.981 -7.505 -32.327 5.234 0.408 0.405 C02 QEM 6 QEM C03 C03 C 0 1 Y N N N N N 28.098 -8.836 -31.940 6.187 0.324 -0.593 C03 QEM 7 QEM C04 C04 C 0 1 Y N N N N N 29.265 -9.281 -31.291 6.788 1.473 -1.073 C04 QEM 8 QEM C05 C05 C 0 1 Y N N N N N 30.302 -8.353 -31.050 6.435 2.705 -0.556 C05 QEM 9 QEM C06 C06 C 0 1 Y N N N N N 30.201 -7.028 -31.429 5.481 2.789 0.440 C06 QEM 10 QEM C07 C07 C 0 1 N N N N N N 26.718 -7.023 -33.034 4.579 -0.845 0.928 C07 QEM 11 QEM C08 C08 C 0 1 N N N N N N 25.523 -6.884 -32.040 3.323 -1.145 0.108 C08 QEM 12 QEM C09 C09 C 0 1 N N N N N N 24.337 -6.955 -32.847 2.291 -0.035 0.327 C09 QEM 13 QEM C10 C10 C 0 1 N N N N N N 23.110 -6.572 -32.085 1.015 -0.372 -0.448 C10 QEM 14 QEM C11 C11 C 0 1 N N N N N N 24.381 -5.141 -30.661 1.438 -2.748 -0.225 C11 QEM 15 QEM C12 C12 C 0 1 N N N N N N 25.654 -5.616 -31.282 2.727 -2.482 0.556 C12 QEM 16 QEM C13 C13 C 0 1 N N N N N N 22.444 -4.124 -31.090 -0.815 -1.949 -0.605 C13 QEM 17 QEM C14 C14 C 0 1 N N S N N N 21.300 -3.687 -31.980 -1.849 -0.927 -0.128 C14 QEM 18 QEM C15 C15 C 0 1 N N R N N N 20.033 -4.017 -31.268 -3.168 -1.151 -0.870 C15 QEM 19 QEM C16 C16 C 0 1 Y N N N N N 18.716 -3.448 -31.798 -4.148 -0.070 -0.491 C16 QEM 20 QEM C17 C17 C 0 1 N N N N N N 21.458 -2.183 -32.238 -2.075 -1.094 1.376 C17 QEM 21 QEM C18 C18 C 0 1 Y N N N N N 18.100 -2.425 -31.106 -4.843 -0.155 0.701 C18 QEM 22 QEM C19 C19 C 0 1 Y N N N N N 16.878 -1.886 -31.545 -5.741 0.834 1.050 C19 QEM 23 QEM C20 C20 C 0 1 Y N N N N N 16.266 -2.395 -32.671 -5.946 1.914 0.204 C20 QEM 24 QEM C21 C21 C 0 1 Y N N N N N 16.877 -3.441 -33.376 -5.242 2.001 -0.989 C21 QEM 25 QEM H H H 0 1 N N N N N N 18.540 -4.786 -33.494 -3.805 1.070 -2.267 H QEM 26 QEM HO HO H 0 1 N N N N N N 14.717 -2.289 -33.871 -6.439 3.613 1.053 HO QEM 27 QEM H01 H01 H 0 1 N N N N N N 28.945 -5.558 -32.383 4.133 1.706 1.698 H01 QEM 28 QEM HO01 HO01 H 0 0 N N N N N N 19.333 -3.875 -29.460 -3.888 -2.526 0.431 HO01 QEM 29 QEM H03 H03 H 0 1 N N N N N N 27.293 -9.528 -32.138 6.463 -0.639 -0.997 H03 QEM 30 QEM H04 H04 H 0 1 N N N N N N 29.365 -10.311 -30.983 7.533 1.407 -1.852 H04 QEM 31 QEM H05 H05 H 0 1 N N N N N N 31.201 -8.689 -30.555 6.904 3.603 -0.932 H05 QEM 32 QEM H06 H06 H 0 1 N N N N N N 31.008 -6.339 -31.229 5.202 3.752 0.842 H06 QEM 33 QEM H07 H07 H 0 1 N N N N N N 26.918 -6.041 -33.487 5.275 -1.680 0.847 H07 QEM 34 QEM H07A H07A H 0 0 N N N N N N 26.448 -7.751 -33.813 4.305 -0.701 1.974 H07A QEM 35 QEM H08 H08 H 0 1 N N N N N N 25.492 -7.677 -31.279 3.583 -1.199 -0.950 H08 QEM 36 QEM H09 H09 H 0 1 N N N N N N 24.450 -6.266 -33.697 2.062 0.043 1.389 H09 QEM 37 QEM H09A H09A H 0 0 N N N N N N 24.218 -7.988 -33.205 2.695 0.912 -0.030 H09A QEM 38 QEM H10 H10 H 0 1 N N N N N N 22.965 -7.263 -31.241 1.243 -0.437 -1.512 H10 QEM 39 QEM H10A H10A H 0 0 N N N N N N 22.232 -6.620 -32.746 0.273 0.409 -0.283 H10A QEM 40 QEM H11 H11 H 0 1 N N N N N N 24.506 -4.093 -30.352 1.003 -3.692 0.102 H11 QEM 41 QEM H11A H11A H 0 0 N N N N N N 24.157 -5.769 -29.786 1.664 -2.802 -1.290 H11A QEM 42 QEM H12 H12 H 0 1 N N N N N N 26.385 -5.777 -30.476 3.441 -3.282 0.363 H12 QEM 43 QEM H12A H12A H 0 0 N N N N N N 26.002 -4.839 -31.979 2.504 -2.442 1.622 H12A QEM 44 QEM H13 H13 H 0 1 N N N N N N 22.007 -4.453 -30.136 -0.719 -1.889 -1.689 H13 QEM 45 QEM H13A H13A H 0 0 N N N N N N 23.103 -3.253 -30.955 -1.138 -2.951 -0.323 H13A QEM 46 QEM H14 H14 H 0 1 N N N N N N 21.291 -4.198 -32.954 -1.485 0.080 -0.330 H14 QEM 47 QEM H15 H15 H 0 1 N N N N N N 19.947 -5.099 -31.448 -2.990 -1.119 -1.945 H15 QEM 48 QEM H17 H17 H 0 1 N N N N N N 20.639 -1.833 -32.884 -1.136 -0.935 1.905 H17 QEM 49 QEM H17A H17A H 0 0 N N N N N N 21.427 -1.642 -31.281 -2.812 -0.366 1.716 H17A QEM 50 QEM H17B H17B H 0 0 N N N N N N 22.422 -1.995 -32.734 -2.440 -2.101 1.579 H17B QEM 51 QEM H18 H18 H 0 1 N N N N N N 18.564 -2.032 -30.213 -4.683 -0.997 1.359 H18 QEM 52 QEM H19 H19 H 0 1 N N N N N N 16.419 -1.074 -31.001 -6.284 0.767 1.981 H19 QEM 53 QEM H21 H21 H 0 1 N N N N N N 16.402 -3.837 -34.262 -5.399 2.841 -1.649 H21 QEM 54 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal QEM C21 C DOUB Y N 1 QEM C C16 SING Y N 2 QEM C H SING N N 3 QEM C10 N SING N N 4 QEM N C13 SING N N 5 QEM N C11 SING N N 6 QEM O C20 SING N N 7 QEM O HO SING N N 8 QEM C02 C01 DOUB Y N 9 QEM C01 C06 SING Y N 10 QEM C01 H01 SING N N 11 QEM C15 O01 SING N N 12 QEM O01 HO01 SING N N 13 QEM C07 C02 SING N N 14 QEM C02 C03 SING Y N 15 QEM C03 C04 DOUB Y N 16 QEM C03 H03 SING N N 17 QEM C04 C05 SING Y N 18 QEM C04 H04 SING N N 19 QEM C06 C05 DOUB Y N 20 QEM C05 H05 SING N N 21 QEM C06 H06 SING N N 22 QEM C07 C08 SING N N 23 QEM C07 H07 SING N N 24 QEM C07 H07A SING N N 25 QEM C09 C08 SING N N 26 QEM C08 C12 SING N N 27 QEM C08 H08 SING N N 28 QEM C09 C10 SING N N 29 QEM C09 H09 SING N N 30 QEM C09 H09A SING N N 31 QEM C10 H10 SING N N 32 QEM C10 H10A SING N N 33 QEM C12 C11 SING N N 34 QEM C11 H11 SING N N 35 QEM C11 H11A SING N N 36 QEM C12 H12 SING N N 37 QEM C12 H12A SING N N 38 QEM C14 C13 SING N N 39 QEM C13 H13 SING N N 40 QEM C13 H13A SING N N 41 QEM C17 C14 SING N N 42 QEM C14 C15 SING N N 43 QEM C14 H14 SING N N 44 QEM C16 C15 SING N N 45 QEM C15 H15 SING N N 46 QEM C16 C18 DOUB Y N 47 QEM C17 H17 SING N N 48 QEM C17 H17A SING N N 49 QEM C17 H17B SING N N 50 QEM C19 C18 SING Y N 51 QEM C18 H18 SING N N 52 QEM C20 C19 DOUB Y N 53 QEM C19 H19 SING N N 54 QEM C21 C20 SING Y N 55 QEM C21 H21 SING N N 56 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor QEM SMILES ACDLabs 12.01 Oc1ccc(cc1)C(O)C(CN2CCC(CC2)Cc3ccccc3)C QEM SMILES_CANONICAL CACTVS 3.370 C[C@@H](CN1CC[C@H](CC1)Cc2ccccc2)[C@@H](O)c3ccc(O)cc3 QEM SMILES CACTVS 3.370 C[CH](CN1CC[CH](CC1)Cc2ccccc2)[CH](O)c3ccc(O)cc3 QEM SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 C[C@@H](CN1CCC(CC1)Cc2ccccc2)[C@H](c3ccc(cc3)O)O QEM SMILES "OpenEye OEToolkits" 1.7.0 CC(CN1CCC(CC1)Cc2ccccc2)C(c3ccc(cc3)O)O QEM InChI InChI 1.03 InChI=1S/C22H29NO2/c1-17(22(25)20-7-9-21(24)10-8-20)16-23-13-11-19(12-14-23)15-18-5-3-2-4-6-18/h2-10,17,19,22,24-25H,11-16H2,1H3/t17-,22+/m0/s1 QEM InChIKey InChI 1.03 WVZSEUPGUDIELE-HTAPYJJXSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier QEM "SYSTEMATIC NAME" ACDLabs 12.01 4-[(1R,2S)-3-(4-benzylpiperidin-1-yl)-1-hydroxy-2-methylpropyl]phenol QEM "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 4-[(1R,2S)-1-hydroxy-2-methyl-3-[4-(phenylmethyl)piperidin-1-yl]propyl]phenol # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site QEM 'Create component' 2011-01-28 RCSB QEM 'Modify aromatic_flag' 2011-06-04 RCSB QEM 'Modify descriptor' 2011-06-04 RCSB # _pdbe_chem_comp_synonyms.comp_id QEM _pdbe_chem_comp_synonyms.name Ro-25-6981 _pdbe_chem_comp_synonyms.provenance ChEMBL _pdbe_chem_comp_synonyms.type 'Research Code' # loop_ _software.name _software.version _software.description rdkit 2023.03.3 'Core functionality.' pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.' # loop_ _pdbe_chem_comp_atom_depiction.comp_id _pdbe_chem_comp_atom_depiction.atom_id _pdbe_chem_comp_atom_depiction.element _pdbe_chem_comp_atom_depiction.model_Cartn_x _pdbe_chem_comp_atom_depiction.model_Cartn_y _pdbe_chem_comp_atom_depiction.pdbx_ordinal QEM C C 3.000 -3.893 1 QEM N N 6.897 1.357 2 QEM O O 4.299 -7.643 3 QEM C01 C 12.093 5.857 4 QEM O01 O 3.000 -0.892 5 QEM C02 C 10.794 5.107 6 QEM C03 C 9.495 5.857 7 QEM C04 C 9.495 7.357 8 QEM C05 C 10.794 8.107 9 QEM C06 C 12.093 7.357 10 QEM C07 C 10.794 3.607 11 QEM C08 C 9.495 2.857 12 QEM C09 C 9.495 1.357 13 QEM C10 C 8.196 0.608 14 QEM C11 C 6.897 2.857 15 QEM C12 C 8.196 3.607 16 QEM C13 C 5.598 0.608 17 QEM C14 C 5.598 -0.892 18 QEM C15 C 4.299 -1.643 19 QEM C16 C 4.299 -3.143 20 QEM C17 C 6.897 -1.643 21 QEM C18 C 5.598 -3.893 22 QEM C19 C 5.598 -5.393 23 QEM C20 C 4.299 -6.143 24 QEM C21 C 3.000 -5.393 25 # loop_ _pdbe_chem_comp_bond_depiction.comp_id _pdbe_chem_comp_bond_depiction.atom_id_1 _pdbe_chem_comp_bond_depiction.atom_id_2 _pdbe_chem_comp_bond_depiction.value_order _pdbe_chem_comp_bond_depiction.bond_dir _pdbe_chem_comp_bond_depiction.pdbx_ordinal QEM C21 C DOUBLE NONE 1 QEM C C16 SINGLE NONE 2 QEM C10 N SINGLE NONE 3 QEM N C13 SINGLE NONE 4 QEM N C11 SINGLE NONE 5 QEM O C20 SINGLE NONE 6 QEM C02 C01 DOUBLE NONE 7 QEM C01 C06 SINGLE NONE 8 QEM C15 O01 SINGLE BEGINDASH 9 QEM C07 C02 SINGLE NONE 10 QEM C02 C03 SINGLE NONE 11 QEM C03 C04 DOUBLE NONE 12 QEM C04 C05 SINGLE NONE 13 QEM C06 C05 DOUBLE NONE 14 QEM C07 C08 SINGLE NONE 15 QEM C09 C08 SINGLE NONE 16 QEM C08 C12 SINGLE NONE 17 QEM C09 C10 SINGLE NONE 18 QEM C12 C11 SINGLE NONE 19 QEM C14 C13 SINGLE NONE 20 QEM C14 C17 SINGLE BEGINDASH 21 QEM C14 C15 SINGLE NONE 22 QEM C16 C15 SINGLE NONE 23 QEM C16 C18 DOUBLE NONE 24 QEM C19 C18 SINGLE NONE 25 QEM C20 C19 DOUBLE NONE 26 QEM C21 C20 SINGLE NONE 27 # loop_ _pdbe_chem_comp_substructure.comp_id _pdbe_chem_comp_substructure.substructure_name _pdbe_chem_comp_substructure.id _pdbe_chem_comp_substructure.substructure_type _pdbe_chem_comp_substructure.substructure_smiles _pdbe_chem_comp_substructure.substructure_inchis _pdbe_chem_comp_substructure.substructure_inchikeys QEM MurckoScaffold S1 scaffold c1ccc(CCCN2CCC(Cc3ccccc3)CC2)cc1 InChI=1S/C21H27N/c1-3-8-19(9-4-1)12-7-15-22-16-13-21(14-17-22)18-20-10-5-2-6-11-20/h1-6,8-11,21H,7,12-18H2 OEOKSYGSLJBPFM-UHFFFAOYSA-N QEM phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N # loop_ _pdbe_chem_comp_substructure_mapping.comp_id _pdbe_chem_comp_substructure_mapping.atom_id _pdbe_chem_comp_substructure_mapping.substructure_id _pdbe_chem_comp_substructure_mapping.substructure_ordinal QEM C S1 1 QEM N S1 1 QEM C01 S1 1 QEM C02 S1 1 QEM C03 S1 1 QEM C04 S1 1 QEM C05 S1 1 QEM C06 S1 1 QEM C07 S1 1 QEM C08 S1 1 QEM C09 S1 1 QEM C10 S1 1 QEM C11 S1 1 QEM C12 S1 1 QEM C13 S1 1 QEM C14 S1 1 QEM C15 S1 1 QEM C16 S1 1 QEM C18 S1 1 QEM C19 S1 1 QEM C20 S1 1 QEM C21 S1 1 QEM C F1 1 QEM C21 F1 1 QEM C20 F1 1 QEM C19 F1 1 QEM C18 F1 1 QEM C16 F1 1 QEM C01 F1 2 QEM C02 F1 2 QEM C03 F1 2 QEM C04 F1 2 QEM C05 F1 2 QEM C06 F1 2 # _pdbe_chem_comp_rdkit_properties.comp_id QEM _pdbe_chem_comp_rdkit_properties.exactmw 339.220 _pdbe_chem_comp_rdkit_properties.amw 339.479 _pdbe_chem_comp_rdkit_properties.lipinskiHBA 3 _pdbe_chem_comp_rdkit_properties.lipinskiHBD 2 _pdbe_chem_comp_rdkit_properties.NumRotatableBonds 9 _pdbe_chem_comp_rdkit_properties.NumHBD 2 _pdbe_chem_comp_rdkit_properties.NumHBA 3 _pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 25 _pdbe_chem_comp_rdkit_properties.NumAtoms 54 _pdbe_chem_comp_rdkit_properties.NumHeteroatoms 3 _pdbe_chem_comp_rdkit_properties.NumAmideBonds 0 _pdbe_chem_comp_rdkit_properties.FractionCSP3 0.455 _pdbe_chem_comp_rdkit_properties.NumRings 3 _pdbe_chem_comp_rdkit_properties.NumAromaticRings 2 _pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1 _pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1 _pdbe_chem_comp_rdkit_properties.NumHeterocycles 1 _pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0 _pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1 _pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1 _pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0 _pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0 _pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 2 _pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0 _pdbe_chem_comp_rdkit_properties.labuteASA 191.398 _pdbe_chem_comp_rdkit_properties.tpsa 43.700 _pdbe_chem_comp_rdkit_properties.CrippenClogP 3.445 _pdbe_chem_comp_rdkit_properties.CrippenMR 100.399 _pdbe_chem_comp_rdkit_properties.chi0v 12.264 _pdbe_chem_comp_rdkit_properties.chi1v 6.579 _pdbe_chem_comp_rdkit_properties.chi2v 2.615 _pdbe_chem_comp_rdkit_properties.chi3v 2.615 _pdbe_chem_comp_rdkit_properties.chi4v 1.541 _pdbe_chem_comp_rdkit_properties.chi0n 41.264 _pdbe_chem_comp_rdkit_properties.chi1n 20.896 _pdbe_chem_comp_rdkit_properties.chi2n 2.615 _pdbe_chem_comp_rdkit_properties.chi3n 2.615 _pdbe_chem_comp_rdkit_properties.chi4n 1.541 _pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.840 _pdbe_chem_comp_rdkit_properties.kappa1 3.877 _pdbe_chem_comp_rdkit_properties.kappa2 8.503 _pdbe_chem_comp_rdkit_properties.kappa3 5.067 _pdbe_chem_comp_rdkit_properties.Phi 1.319 # loop_ _pdbe_chem_comp_external_mappings.comp_id _pdbe_chem_comp_external_mappings.source _pdbe_chem_comp_external_mappings.resource _pdbe_chem_comp_external_mappings.resource_id QEM UniChem ChEMBL CHEMBL305195 QEM UniChem PDBe QEM QEM UniChem ChEBI 92897 QEM UniChem ZINC ZINC000000007042 QEM UniChem SureChEMBL SCHEMBL6159263 QEM UniChem 'PubChem TPHARMA' 14924802 QEM UniChem LINCS LSM-3140 QEM UniChem Nikkaji J915.275J QEM UniChem MedChemExpress HY-13993 QEM UniChem 'Probes And Drugs' PD071001 QEM UniChem BindingDb 50080029 QEM UniChem PubChem 6604887 # loop_ _pdbe_chem_comp_rdkit_conformer.comp_id _pdbe_chem_comp_rdkit_conformer.atom_id _pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit _pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit _pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit _pdbe_chem_comp_rdkit_conformer.rdkit_method _pdbe_chem_comp_rdkit_conformer.rdkit_ordinal QEM C -5.475 -0.466 0.763 ETKDGv3 1 QEM N -0.152 -0.578 0.210 ETKDGv3 2 QEM O -7.188 -0.651 -2.516 ETKDGv3 3 QEM C01 5.502 -1.055 0.115 ETKDGv3 4 QEM O01 -3.247 2.377 1.553 ETKDGv3 5 QEM C02 5.005 -0.204 -0.802 ETKDGv3 6 QEM C03 5.719 1.069 -1.075 ETKDGv3 7 QEM C04 6.850 1.361 -0.422 ETKDGv3 8 QEM C05 7.394 0.418 0.576 ETKDGv3 9 QEM C06 6.754 -0.729 0.831 ETKDGv3 10 QEM C07 3.713 -0.505 -1.519 ETKDGv3 11 QEM C08 2.525 0.282 -0.922 ETKDGv3 12 QEM C09 1.243 0.085 -1.771 ETKDGv3 13 QEM C10 0.314 -0.967 -1.149 ETKDGv3 14 QEM C11 0.847 0.211 0.981 ETKDGv3 15 QEM C12 2.288 -0.097 0.561 ETKDGv3 16 QEM C13 -1.466 0.105 0.156 ETKDGv3 17 QEM C14 -2.153 0.163 1.549 ETKDGv3 18 QEM C15 -3.480 0.987 1.559 ETKDGv3 19 QEM C16 -4.467 0.587 0.475 ETKDGv3 20 QEM C17 -2.386 -1.261 2.085 ETKDGv3 21 QEM C18 -4.433 1.136 -0.757 ETKDGv3 22 QEM C19 -5.389 0.701 -1.797 ETKDGv3 23 QEM C20 -6.294 -0.247 -1.528 ETKDGv3 24 QEM C21 -6.337 -0.860 -0.182 ETKDGv3 25 QEM H -5.516 -0.925 1.743 ETKDGv3 26 QEM HO -7.881 -1.367 -2.335 ETKDGv3 27 QEM H01 4.993 -1.983 0.344 ETKDGv3 28 QEM HO01 -2.569 2.586 0.864 ETKDGv3 29 QEM H03 5.324 1.766 -1.804 ETKDGv3 30 QEM H04 7.369 2.290 -0.623 ETKDGv3 31 QEM H05 8.309 0.658 1.101 ETKDGv3 32 QEM H06 7.149 -1.420 1.564 ETKDGv3 33 QEM H07 3.841 -0.225 -2.588 ETKDGv3 34 QEM H07A 3.494 -1.596 -1.498 ETKDGv3 35 QEM H08 2.780 1.365 -0.963 ETKDGv3 36 QEM H09 1.488 -0.210 -2.814 ETKDGv3 37 QEM H09A 0.691 1.048 -1.833 ETKDGv3 38 QEM H10 -0.534 -1.158 -1.843 ETKDGv3 39 QEM H10A 0.860 -1.932 -1.074 ETKDGv3 40 QEM H11 0.746 -0.039 2.059 ETKDGv3 41 QEM H11A 0.677 1.306 0.868 ETKDGv3 42 QEM H12 2.477 -1.181 0.725 ETKDGv3 43 QEM H12A 2.991 0.471 1.209 ETKDGv3 44 QEM H13 -2.148 -0.452 -0.522 ETKDGv3 45 QEM H13A -1.343 1.122 -0.273 ETKDGv3 46 QEM H14 -1.470 0.670 2.264 ETKDGv3 47 QEM H15 -3.976 0.789 2.535 ETKDGv3 48 QEM H17 -1.419 -1.793 2.205 ETKDGv3 49 QEM H17A -3.026 -1.844 1.390 ETKDGv3 50 QEM H17B -2.875 -1.227 3.082 ETKDGv3 51 QEM H18 -3.705 1.892 -1.015 ETKDGv3 52 QEM H19 -5.349 1.153 -2.780 ETKDGv3 53 QEM H21 -7.066 -1.629 0.039 ETKDGv3 54 #