data_QHN
#
_chem_comp.id QHN
_chem_comp.name "5-cyclopropyl-1-phenyl-pyrazole-4-carboxylic acid"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C13 H12 N2 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2020-06-17
_chem_comp.pdbx_modified_date 2021-04-09
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 228.247
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code QHN
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6ZEX
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
QHN C1 C1 C 0 1 N N N N N N -39.206 -16.787 11.441 3.242 0.108 -0.146 C1 QHN 1
QHN C10 C2 C 0 1 Y N N N N N -39.224 -19.081 4.831 -3.478 -0.885 -0.882 C10 QHN 2
QHN C11 C3 C 0 1 Y N N N N N -39.160 -18.109 3.858 -4.372 -0.144 -0.131 C11 QHN 3
QHN C12 C4 C 0 1 Y N N N N N -38.945 -16.802 4.220 -3.923 0.914 0.639 C12 QHN 4
QHN C13 C5 C 0 1 Y N N N N N -38.792 -16.454 5.551 -2.579 1.232 0.660 C13 QHN 5
QHN C2 C6 C 0 1 Y N N N N N -38.776 -16.770 10.065 1.876 0.656 -0.097 C2 QHN 6
QHN C3 C7 C 0 1 Y N N N N N -39.441 -17.325 8.979 0.700 -0.068 -0.146 C3 QHN 7
QHN C4 C8 C 0 1 N N N N N N -40.739 -17.992 8.926 0.578 -1.565 -0.260 C4 QHN 8
QHN C5 C9 C 0 1 N N N N N N -41.719 -17.604 7.866 -0.376 -2.271 0.706 C5 QHN 9
QHN C6 C10 C 0 1 N N N N N N -41.965 -17.209 9.266 1.137 -2.409 0.888 C6 QHN 10
QHN C7 C11 C 0 1 Y N N N N N -37.605 -16.276 9.564 1.522 2.020 0.014 C7 QHN 11
QHN C8 C12 C 0 1 Y N N N N N -38.860 -17.431 6.519 -1.679 0.491 -0.093 C8 QHN 12
QHN C9 C13 C 0 1 Y N N N N N -39.082 -18.749 6.170 -2.133 -0.570 -0.865 C9 QHN 13
QHN N1 N1 N 0 1 Y N N N N N -38.684 -17.071 7.885 -0.315 0.812 -0.073 N1 QHN 14
QHN N2 N2 N 0 1 Y N N N N N -37.535 -16.437 8.258 0.220 2.101 0.026 N2 QHN 15
QHN O1 O1 O 0 1 N N N N N N -39.919 -17.674 11.807 3.414 -1.079 -0.342 O1 QHN 16
QHN O2 O2 O 0 1 N N N N N N -38.879 -15.926 12.202 4.302 0.924 0.021 O2 QHN 17
QHN H8 H1 H 0 1 N N N N N N -39.386 -20.111 4.549 -3.831 -1.712 -1.479 H8 QHN 18
QHN H9 H2 H 0 1 N N N N N N -39.278 -18.373 2.817 -5.423 -0.391 -0.146 H9 QHN 19
QHN H10 H3 H 0 1 N N N N N N -38.895 -16.038 3.459 -4.624 1.491 1.224 H10 QHN 20
QHN H11 H4 H 0 1 N N N N N N -38.621 -15.424 5.828 -2.229 2.059 1.261 H11 QHN 21
QHN H1 H5 H 0 1 N N N N N N -40.754 -19.051 9.222 0.663 -1.969 -1.269 H1 QHN 22
QHN H3 H6 H 0 1 N N N N N N -41.448 -16.842 7.120 -0.915 -1.653 1.424 H3 QHN 23
QHN H2 H7 H 0 1 N N N N N N -42.349 -18.372 7.393 -0.919 -3.139 0.333 H2 QHN 24
QHN H5 H8 H 0 1 N N N N N N -41.877 -16.153 9.562 1.589 -3.367 0.633 H5 QHN 25
QHN H4 H9 H 0 1 N N N N N N -42.778 -17.683 9.835 1.594 -1.880 1.725 H4 QHN 26
QHN H6 H10 H 0 1 N N N N N N -36.835 -15.812 10.162 2.210 2.851 0.079 H6 QHN 27
QHN H7 H11 H 0 1 N N N N N N -39.144 -19.512 6.931 -1.435 -1.152 -1.448 H7 QHN 28
QHN H12 H12 H 0 1 N N N N N N -39.268 -16.091 13.053 5.179 0.519 -0.023 H12 QHN 29
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
QHN C11 C12 DOUB Y N 1
QHN C11 C10 SING Y N 2
QHN C12 C13 SING Y N 3
QHN C10 C9 DOUB Y N 4
QHN C13 C8 DOUB Y N 5
QHN C9 C8 SING Y N 6
QHN C8 N1 SING N N 7
QHN C5 C4 SING N N 8
QHN C5 C6 SING N N 9
QHN N1 N2 SING Y N 10
QHN N1 C3 SING Y N 11
QHN N2 C7 DOUB Y N 12
QHN C4 C3 SING N N 13
QHN C4 C6 SING N N 14
QHN C3 C2 DOUB Y N 15
QHN C7 C2 SING Y N 16
QHN C2 C1 SING N N 17
QHN C1 O1 DOUB N N 18
QHN C1 O2 SING N N 19
QHN C10 H8 SING N N 20
QHN C11 H9 SING N N 21
QHN C12 H10 SING N N 22
QHN C13 H11 SING N N 23
QHN C4 H1 SING N N 24
QHN C5 H3 SING N N 25
QHN C5 H2 SING N N 26
QHN C6 H5 SING N N 27
QHN C6 H4 SING N N 28
QHN C7 H6 SING N N 29
QHN C9 H7 SING N N 30
QHN O2 H12 SING N N 31
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
QHN InChI InChI 1.03 InChI=1S/C13H12N2O2/c16-13(17)11-8-14-15(12(11)9-6-7-9)10-4-2-1-3-5-10/h1-5,8-9H,6-7H2,(H,16,17)
QHN InChIKey InChI 1.03 GOFLYUKBUGVGJT-UHFFFAOYSA-N
QHN SMILES_CANONICAL CACTVS 3.385 OC(=O)c1cnn(c2ccccc2)c1C3CC3
QHN SMILES CACTVS 3.385 OC(=O)c1cnn(c2ccccc2)c1C3CC3
QHN SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 c1ccc(cc1)n2c(c(cn2)C(=O)O)C3CC3
QHN SMILES "OpenEye OEToolkits" 2.0.7 c1ccc(cc1)n2c(c(cn2)C(=O)O)C3CC3
#
_pdbx_chem_comp_identifier.comp_id QHN
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier "5-cyclopropyl-1-phenyl-pyrazole-4-carboxylic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
QHN 'Create component' 2020-06-17 PDBE
QHN 'Initial release' 2021-04-14 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
QHN C1 C 5.931 2.950 1
QHN C10 C 5.598 -4.322 2
QHN C11 C 4.299 -5.072 3
QHN C12 C 3.000 -4.322 4
QHN C13 C 3.000 -2.822 5
QHN C2 C 5.049 1.736 6
QHN C3 C 5.513 0.309 7
QHN C4 C 6.939 -0.154 8
QHN C5 C 7.943 -1.269 9
QHN C6 C 8.406 0.158 10
QHN C7 C 3.549 1.736 11
QHN C8 C 4.299 -2.072 12
QHN C9 C 5.598 -2.822 13
QHN N1 N 4.299 -0.572 14
QHN N2 N 3.086 0.309 15
QHN O1 O 5.321 4.320 16
QHN O2 O 7.422 2.793 17
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
QHN C11 C12 SINGLE NONE 1
QHN C11 C10 DOUBLE NONE 2
QHN C12 C13 DOUBLE NONE 3
QHN C10 C9 SINGLE NONE 4
QHN C13 C8 SINGLE NONE 5
QHN C9 C8 DOUBLE NONE 6
QHN C8 N1 SINGLE NONE 7
QHN C5 C4 SINGLE NONE 8
QHN C5 C6 SINGLE NONE 9
QHN N1 N2 SINGLE NONE 10
QHN N1 C3 SINGLE NONE 11
QHN N2 C7 DOUBLE NONE 12
QHN C4 C3 SINGLE NONE 13
QHN C4 C6 SINGLE NONE 14
QHN C3 C2 DOUBLE NONE 15
QHN C7 C2 SINGLE NONE 16
QHN C2 C1 SINGLE NONE 17
QHN C1 O1 DOUBLE NONE 18
QHN C1 O2 SINGLE NONE 19
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
QHN MurckoScaffold S1 scaffold c1ccc(-n2nccc2C2CC2)cc1 InChI=1S/C12H12N2/c1-2-4-11(5-3-1)14-12(8-9-13-14)10-6-7-10/h1-5,8-10H,6-7H2 UHTAGDTUWKUROA-UHFFFAOYSA-N
QHN cyclopropane F1 fragment C1CC1 InChI=1S/C3H6/c1-2-3-1/h1-3H2 LVZWSLJZHVFIQJ-UHFFFAOYSA-N
QHN phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
QHN pyrazole F3 fragment 'c1cn[nH]c1' InChI=1S/C3H4N2/c1-2-4-5-3-1/h1-3H,(H,4,5) WTKZEGDFNFYCGP-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
QHN C10 S1 1
QHN C11 S1 1
QHN C12 S1 1
QHN C13 S1 1
QHN C2 S1 1
QHN C3 S1 1
QHN C4 S1 1
QHN C5 S1 1
QHN C6 S1 1
QHN C7 S1 1
QHN C8 S1 1
QHN C9 S1 1
QHN N1 S1 1
QHN N2 S1 1
QHN C4 F1 1
QHN C5 F1 1
QHN C6 F1 1
QHN C10 F2 1
QHN C11 F2 1
QHN C12 F2 1
QHN C13 F2 1
QHN C8 F2 1
QHN C9 F2 1
QHN C3 F3 1
QHN C2 F3 1
QHN C7 F3 1
QHN N2 F3 1
QHN N1 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id QHN
_pdbe_chem_comp_rdkit_properties.exactmw 228.090
_pdbe_chem_comp_rdkit_properties.amw 228.251
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 4
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 3
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 4
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 17
_pdbe_chem_comp_rdkit_properties.NumAtoms 29
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 4
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.231
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 115.452
_pdbe_chem_comp_rdkit_properties.tpsa 55.120
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.148
_pdbe_chem_comp_rdkit_properties.CrippenMR 61.305
_pdbe_chem_comp_rdkit_properties.chi0v 8.211
_pdbe_chem_comp_rdkit_properties.chi1v 4.529
_pdbe_chem_comp_rdkit_properties.chi2v 2.100
_pdbe_chem_comp_rdkit_properties.chi3v 2.100
_pdbe_chem_comp_rdkit_properties.chi4v 1.343
_pdbe_chem_comp_rdkit_properties.chi0n 20.211
_pdbe_chem_comp_rdkit_properties.chi1n 10.437
_pdbe_chem_comp_rdkit_properties.chi2n 2.100
_pdbe_chem_comp_rdkit_properties.chi3n 2.100
_pdbe_chem_comp_rdkit_properties.chi4n 1.343
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.100
_pdbe_chem_comp_rdkit_properties.kappa1 3.447
_pdbe_chem_comp_rdkit_properties.kappa2 3.731
_pdbe_chem_comp_rdkit_properties.kappa3 1.713
_pdbe_chem_comp_rdkit_properties.Phi 0.756
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
QHN UniChem ChEMBL CHEMBL4867889
QHN UniChem PDBe QHN
QHN UniChem ZINC ZINC000012879700
QHN UniChem eMolecules 17152133
QHN UniChem SureChEMBL SCHEMBL3494329
QHN UniChem PubChem 22267908
QHN UniChem Mcule MCULE-3371041986
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
QHN C1 -3.113 1.907 0.037 ETKDGv3 1
QHN C10 3.534 -1.144 1.400 ETKDGv3 2
QHN C11 4.003 -1.255 0.152 ETKDGv3 3
QHN C12 3.219 -0.724 -0.981 ETKDGv3 4
QHN C13 2.033 -0.142 -0.762 ETKDGv3 5
QHN C2 -1.795 1.496 0.552 ETKDGv3 6
QHN C3 -0.937 0.614 0.037 ETKDGv3 7
QHN C4 -1.160 -0.247 -1.180 ETKDGv3 8
QHN C5 -2.286 -1.264 -1.040 ETKDGv3 9
QHN C6 -0.844 -1.726 -0.992 ETKDGv3 10
QHN C7 -1.163 2.009 1.770 ETKDGv3 11
QHN C8 1.493 -0.037 0.618 ETKDGv3 12
QHN C9 2.226 -0.500 1.646 ETKDGv3 13
QHN N1 0.224 0.587 0.869 ETKDGv3 14
QHN N2 0.001 1.471 1.931 ETKDGv3 15
QHN O1 -3.524 1.503 -1.083 ETKDGv3 16
QHN O2 -3.904 2.769 0.790 ETKDGv3 17
QHN H8 4.109 -1.527 2.233 ETKDGv3 18
QHN H9 4.960 -1.727 -0.029 ETKDGv3 19
QHN H10 3.612 -0.794 -1.987 ETKDGv3 20
QHN H11 1.486 0.273 -1.598 ETKDGv3 21
QHN H1 -1.007 0.166 -2.199 ETKDGv3 22
QHN H3 -2.800 -1.296 -0.055 ETKDGv3 23
QHN H2 -2.806 -1.509 -1.991 ETKDGv3 24
QHN H5 -0.517 -2.041 0.022 ETKDGv3 25
QHN H4 -0.507 -2.245 -1.914 ETKDGv3 26
QHN H6 -1.582 2.737 2.451 ETKDGv3 27
QHN H7 1.859 -0.425 2.661 ETKDGv3 28
QHN H12 -4.811 3.070 0.453 ETKDGv3 29
#