data_QVV
#
_chem_comp.id QVV
_chem_comp.name
"benzyl [2-(4-{[2-(6-amino-9H-purin-9-yl)ethyl]carbamoyl}-5-hydroxy-6-oxo-1,6-dihydropyrimidin-2-yl)propan-2-yl]carbamate"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C23 H25 N9 O5"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms SJ000988248
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2020-01-02
_chem_comp.pdbx_modified_date 2021-03-01
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 507.502
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code QVV
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag Y
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6VBR
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
QVV C17 C1 C 0 1 N N N N N N 14.576 37.065 -15.023 3.014 1.774 2.512 C17 QVV 1
QVV C16 C2 C 0 1 N N N N N N 12.631 37.417 -16.574 1.597 -0.169 1.834 C16 QVV 2
QVV C15 C3 C 0 1 N N N N N N 13.574 38.076 -15.572 2.451 0.993 1.323 C15 QVV 3
QVV C22 C4 C 0 1 Y N N N N N 12.860 41.223 -11.782 -6.681 -2.795 -1.894 C22 QVV 4
QVV C19 C5 C 0 1 Y N N N N N 11.907 42.986 -12.725 -6.218 -1.526 -0.035 C19 QVV 5
QVV C20 C6 C 0 1 Y N N N N N 10.642 42.569 -12.229 -7.580 -1.554 0.310 C20 QVV 6
QVV C21 C7 C 0 1 Y N N N N N 10.606 41.425 -11.500 -8.462 -2.256 -0.528 C21 QVV 7
QVV C01 C8 C 0 1 N N N N N N 15.926 39.718 -18.023 1.462 3.785 -0.920 C01 QVV 8
QVV C02 C9 C 0 1 N N N N N N 15.835 41.117 -17.595 0.021 3.527 -1.033 C02 QVV 9
QVV C03 C10 C 0 1 N N N N N N 14.997 41.457 -16.512 -0.496 2.440 -0.348 C03 QVV 10
QVV C04 C11 C 0 1 N N N N N N 14.867 42.897 -16.034 -1.941 2.128 -0.423 C04 QVV 11
QVV C05 C12 C 0 1 N N N N N N 13.896 44.561 -14.484 -3.867 0.760 0.172 C05 QVV 12
QVV C06 C13 C 0 1 N N N N N N 12.486 45.021 -14.121 -4.166 -0.482 1.015 C06 QVV 13
QVV C07 C14 C 0 1 N N N N N N 14.366 39.157 -16.286 1.602 1.908 0.479 C07 QVV 14
QVV C18 C15 C 0 1 Y N N N N N 10.307 44.429 -13.349 -6.552 -0.399 1.830 C18 QVV 15
QVV N01 N1 N 0 1 N N N N N N 15.200 38.771 -17.369 2.197 2.947 -0.156 N01 QVV 16
QVV N02 N2 N 0 1 N N N N N N 13.988 43.190 -14.934 -2.437 1.068 0.246 N02 QVV 17
QVV N03 N3 N 0 1 N N N N N N 14.255 40.461 -15.857 0.327 1.669 0.386 N03 QVV 18
QVV N04 N4 N 0 1 N N N N N N 12.823 38.657 -14.473 3.556 0.469 0.516 N04 QVV 19
QVV N05 N5 N 0 1 Y N N N N N 11.604 44.119 -13.393 -5.596 -0.790 0.942 N05 QVV 20
QVV N06 N6 N 0 1 Y N N N N N 9.610 43.518 -12.643 -7.716 -0.848 1.458 N06 QVV 21
QVV N07 N7 N 0 1 Y N N N N N 13.047 42.340 -12.518 -5.818 -2.154 -1.136 N07 QVV 22
QVV N08 N8 N 0 1 N N N N N N 9.340 40.947 -10.968 -9.814 -2.319 -0.240 N08 QVV 23
QVV N09 N9 N 0 1 Y N N N N N 11.708 40.747 -11.270 -7.970 -2.850 -1.611 N09 QVV 24
QVV O01 O1 O 0 1 N N N N N N 16.755 39.344 -19.081 1.980 4.722 -1.502 O01 QVV 25
QVV O02 O2 O 0 1 N N N N N N 16.574 42.102 -18.256 -0.778 4.327 -1.783 O02 QVV 26
QVV O03 O3 O 0 1 N N N N N N 15.461 43.779 -16.548 -2.680 2.827 -1.087 O03 QVV 27
QVV H1 H1 H 0 1 N N N N N N 15.244 37.563 -14.304 3.628 1.112 3.123 H1 QVV 28
QVV H2 H2 H 0 1 N N N N N N 14.036 36.251 -14.518 3.623 2.602 2.148 H2 QVV 29
QVV H3 H3 H 0 1 N N N N N N 15.171 36.652 -15.851 2.192 2.164 3.113 H3 QVV 30
QVV H4 H4 H 0 1 N N N N N N 12.050 36.631 -16.069 0.775 0.222 2.434 H4 QVV 31
QVV H5 H5 H 0 1 N N N N N N 11.945 38.173 -16.984 1.196 -0.725 0.987 H5 QVV 32
QVV H6 H6 H 0 1 N N N N N N 13.217 36.972 -17.391 2.211 -0.830 2.445 H6 QVV 33
QVV H7 H7 H 0 1 N N N N N N 13.745 40.638 -11.578 -6.323 -3.291 -2.784 H7 QVV 34
QVV H8 H8 H 0 1 N N N N N N 14.532 44.673 -13.594 -4.145 0.570 -0.864 H8 QVV 35
QVV H9 H9 H 0 1 N N N N N N 14.272 45.211 -15.288 -4.442 1.604 0.554 H9 QVV 36
QVV H10 H10 H 0 1 N N N N N N 12.593 45.928 -13.508 -3.592 -1.326 0.634 H10 QVV 37
QVV H11 H11 H 0 1 N N N N N N 11.979 45.273 -15.064 -3.888 -0.292 2.052 H11 QVV 38
QVV H12 H12 H 0 1 N N N N N N 9.872 45.299 -13.819 -6.372 0.196 2.714 H12 QVV 39
QVV H13 H13 H 0 1 N N N N N N 15.253 37.812 -17.648 3.151 3.090 -0.061 H13 QVV 40
QVV H14 H14 H 0 1 N N N N N N 13.456 42.467 -14.493 -1.847 0.510 0.777 H14 QVV 41
QVV H15 H15 H 0 1 N N N N N N 12.663 39.596 -14.167 3.643 0.730 -0.414 H15 QVV 42
QVV H18 H18 H 0 1 N N N N N N 9.491 40.100 -10.459 -10.163 -1.875 0.549 H18 QVV 43
QVV H19 H19 H 0 1 N N N N N N 8.953 41.638 -10.358 -10.413 -2.807 -0.826 H19 QVV 44
QVV H20 H20 H 0 1 N N N N N N 16.401 42.948 -17.859 -0.311 5.055 -2.216 H20 QVV 45
QVV C1 C16 C 0 1 N N N N N N ? ? ? 4.450 -0.376 1.066 C1 QVV 46
QVV O1 O4 O 0 1 N N N N N N ? ? ? 5.465 -0.858 0.324 O1 QVV 47
QVV C3 C17 C 0 1 N N N N N N ? ? ? 6.391 -1.763 0.983 C3 QVV 48
QVV C4 C18 C 0 1 Y N N N N N ? ? ? 7.452 -2.195 0.004 C4 QVV 49
QVV O2 O5 O 0 1 N N N N N N ? ? ? 4.340 -0.703 2.231 O2 QVV 50
QVV C2 C19 C 0 1 Y N N N N N ? ? ? 8.618 -1.463 -0.120 C2 QVV 51
QVV C5 C20 C 0 1 Y N N N N N ? ? ? 9.591 -1.859 -1.018 C5 QVV 52
QVV C6 C21 C 0 1 Y N N N N N ? ? ? 9.399 -2.989 -1.792 C6 QVV 53
QVV C7 C22 C 0 1 Y N N N N N ? ? ? 8.233 -3.721 -1.667 C7 QVV 54
QVV C8 C23 C 0 1 Y N N N N N ? ? ? 7.262 -3.327 -0.766 C8 QVV 55
QVV H16 H16 H 0 1 N N N N N N ? ? ? 6.859 -1.254 1.825 H16 QVV 56
QVV H17 H17 H 0 1 N N N N N N ? ? ? 5.849 -2.638 1.342 H17 QVV 57
QVV H21 H21 H 0 1 N N N N N N ? ? ? 8.768 -0.580 0.484 H21 QVV 58
QVV H22 H22 H 0 1 N N N N N N ? ? ? 10.502 -1.287 -1.115 H22 QVV 59
QVV H23 H23 H 0 1 N N N N N N ? ? ? 10.159 -3.298 -2.494 H23 QVV 60
QVV H24 H24 H 0 1 N N N N N N ? ? ? 8.083 -4.604 -2.272 H24 QVV 61
QVV H25 H25 H 0 1 N N N N N N ? ? ? 6.351 -3.900 -0.669 H25 QVV 62
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
QVV O01 C01 DOUB N N 1
QVV O02 C02 SING N N 2
QVV C01 C02 SING N N 3
QVV C01 N01 SING N N 4
QVV C02 C03 DOUB N N 5
QVV N01 C07 SING N N 6
QVV C16 C15 SING N N 7
QVV O03 C04 DOUB N N 8
QVV C03 C04 SING N N 9
QVV C03 N03 SING N N 10
QVV C07 N03 DOUB N N 11
QVV C07 C15 SING N N 12
QVV C04 N02 SING N N 13
QVV C15 C17 SING N N 14
QVV C15 N04 SING N N 15
QVV N02 C05 SING N N 16
QVV C05 C06 SING N N 17
QVV C06 N05 SING N N 18
QVV N05 C18 SING Y N 19
QVV N05 C19 SING Y N 20
QVV C18 N06 DOUB Y N 21
QVV C19 N07 DOUB Y N 22
QVV C19 C20 SING Y N 23
QVV N06 C20 SING Y N 24
QVV N07 C22 SING Y N 25
QVV C20 C21 DOUB Y N 26
QVV C22 N09 DOUB Y N 27
QVV C21 N09 SING Y N 28
QVV C21 N08 SING N N 29
QVV C17 H1 SING N N 30
QVV C17 H2 SING N N 31
QVV C17 H3 SING N N 32
QVV C16 H4 SING N N 33
QVV C16 H5 SING N N 34
QVV C16 H6 SING N N 35
QVV C22 H7 SING N N 36
QVV C05 H8 SING N N 37
QVV C05 H9 SING N N 38
QVV C06 H10 SING N N 39
QVV C06 H11 SING N N 40
QVV C18 H12 SING N N 41
QVV N01 H13 SING N N 42
QVV N02 H14 SING N N 43
QVV N04 H15 SING N N 44
QVV N08 H18 SING N N 45
QVV N08 H19 SING N N 46
QVV O02 H20 SING N N 47
QVV N04 C1 SING N N 48
QVV C1 O1 SING N N 49
QVV O1 C3 SING N N 50
QVV C3 C4 SING N N 51
QVV C1 O2 DOUB N N 52
QVV C4 C2 SING Y N 53
QVV C2 C5 DOUB Y N 54
QVV C5 C6 SING Y N 55
QVV C6 C7 DOUB Y N 56
QVV C7 C8 SING Y N 57
QVV C8 C4 DOUB Y N 58
QVV C3 H16 SING N N 59
QVV C3 H17 SING N N 60
QVV C2 H21 SING N N 61
QVV C5 H22 SING N N 62
QVV C6 H23 SING N N 63
QVV C7 H24 SING N N 64
QVV C8 H25 SING N N 65
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
QVV SMILES ACDLabs 12.01 CC(C)(NC(OCc1ccccc1)=O)C2=NC(=C(C(N2)=O)O)C(NCCn4c3ncnc(c3nc4)N)=O
QVV InChI InChI 1.03 InChI=1S/C23H25N9O5/c1-23(2,31-22(36)37-10-13-6-4-3-5-7-13)21-29-14(16(33)20(35)30-21)19(34)25-8-9-32-12-28-15-17(24)26-11-27-18(15)32/h3-7,11-12,33H,8-10H2,1-2H3,(H,25,34)(H,31,36)(H2,24,26,27)(H,29,30,35)
QVV InChIKey InChI 1.03 MEMCKKGWXCKHJK-UHFFFAOYSA-N
QVV SMILES_CANONICAL CACTVS 3.385 CC(C)(NC(=O)OCc1ccccc1)C2=NC(=C(O)C(=O)N2)C(=O)NCCn3cnc4c(N)ncnc34
QVV SMILES CACTVS 3.385 CC(C)(NC(=O)OCc1ccccc1)C2=NC(=C(O)C(=O)N2)C(=O)NCCn3cnc4c(N)ncnc34
QVV SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 CC(C)(C1=NC(=C(C(=O)N1)O)C(=O)NCCn2cnc3c2ncnc3N)NC(=O)OCc4ccccc4
QVV SMILES "OpenEye OEToolkits" 2.0.7 CC(C)(C1=NC(=C(C(=O)N1)O)C(=O)NCCn2cnc3c2ncnc3N)NC(=O)OCc4ccccc4
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
QVV "SYSTEMATIC NAME" ACDLabs 12.01 "benzyl [2-(4-{[2-(6-amino-9H-purin-9-yl)ethyl]carbamoyl}-5-hydroxy-6-oxo-1,6-dihydropyrimidin-2-yl)propan-2-yl]carbamate"
QVV "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(phenylmethyl) ~{N}-[2-[4-[2-(6-aminopurin-9-yl)ethylcarbamoyl]-5-oxidanyl-6-oxidanylidene-1~{H}-pyrimidin-2-yl]propan-2-yl]carbamate"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
QVV 'Create component' 2020-01-02 RCSB
QVV 'Initial release' 2021-02-10 RCSB
QVV 'Modify synonyms' 2021-03-01 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id QVV
_pdbx_chem_comp_synonyms.name SJ000988248
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_synonyms.comp_id QVV
_pdbe_chem_comp_synonyms.name SJ000988248
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
QVV C17 C 10.930 -3.244 1
QVV C16 C 8.697 -1.240 2
QVV C15 C 9.813 -2.242 3
QVV C22 C 3.000 6.770 4
QVV C19 C 5.598 6.770 5
QVV C20 C 5.598 8.270 6
QVV C21 C 4.299 9.020 7
QVV C01 C 13.285 -0.318 8
QVV C02 C 12.819 1.108 9
QVV C03 C 11.351 1.417 10
QVV C04 C 10.885 2.843 11
QVV C05 C 8.951 4.578 12
QVV C06 C 7.483 4.887 13
QVV C07 C 10.815 -1.125 14
QVV C18 C 7.893 7.520 15
QVV N01 N 12.283 -1.435 16
QVV N02 N 9.417 3.152 17
QVV N03 N 10.349 0.300 18
QVV N04 N 8.812 -3.358 19
QVV N05 N 7.018 6.313 20
QVV N06 N 7.018 8.727 21
QVV N07 N 4.299 6.020 22
QVV N08 N 4.299 10.520 23
QVV N09 N 3.000 8.270 24
QVV O01 O 14.752 -0.628 25
QVV O02 O 13.820 2.224 26
QVV O03 O 11.887 3.959 27
QVV C1 C 9.278 -4.784 28
QVV O1 O 8.276 -5.901 29
QVV C3 C 8.742 -7.326 30
QVV C4 C 7.740 -8.443 31
QVV O2 O 10.745 -5.093 32
QVV C2 C 6.272 -8.133 33
QVV C5 C 5.271 -9.250 34
QVV C6 C 5.737 -10.676 35
QVV C7 C 7.204 -10.985 36
QVV C8 C 8.206 -9.868 37
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
QVV O01 C01 DOUBLE NONE 1
QVV O02 C02 SINGLE NONE 2
QVV C01 C02 SINGLE NONE 3
QVV C01 N01 SINGLE NONE 4
QVV C02 C03 DOUBLE NONE 5
QVV N01 C07 SINGLE NONE 6
QVV C16 C15 SINGLE NONE 7
QVV O03 C04 DOUBLE NONE 8
QVV C03 C04 SINGLE NONE 9
QVV C03 N03 SINGLE NONE 10
QVV C07 N03 DOUBLE NONE 11
QVV C07 C15 SINGLE NONE 12
QVV C04 N02 SINGLE NONE 13
QVV C15 C17 SINGLE NONE 14
QVV C15 N04 SINGLE NONE 15
QVV N02 C05 SINGLE NONE 16
QVV C05 C06 SINGLE NONE 17
QVV C06 N05 SINGLE NONE 18
QVV N05 C18 SINGLE NONE 19
QVV N05 C19 SINGLE NONE 20
QVV C18 N06 DOUBLE NONE 21
QVV C19 N07 SINGLE NONE 22
QVV C19 C20 DOUBLE NONE 23
QVV N06 C20 SINGLE NONE 24
QVV N07 C22 DOUBLE NONE 25
QVV C20 C21 SINGLE NONE 26
QVV C22 N09 SINGLE NONE 27
QVV C21 N09 DOUBLE NONE 28
QVV C21 N08 SINGLE NONE 29
QVV N04 C1 SINGLE NONE 30
QVV C1 O1 SINGLE NONE 31
QVV O1 C3 SINGLE NONE 32
QVV C3 C4 SINGLE NONE 33
QVV C1 O2 DOUBLE NONE 34
QVV C4 C2 DOUBLE NONE 35
QVV C2 C5 SINGLE NONE 36
QVV C5 C6 DOUBLE NONE 37
QVV C6 C7 SINGLE NONE 38
QVV C7 C8 DOUBLE NONE 39
QVV C8 C4 SINGLE NONE 40
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
QVV MurckoScaffold S1 scaffold 'O=C(NCc1nc(C(=O)NCCn2cnc3cncnc32)cc(=O)[nH]1)OCc1ccccc1' InChI=1S/C21H20N8O4/c30-18-8-15(20(31)23-6-7-29-13-26-16-9-22-12-25-19(16)29)27-17(28-18)10-24-21(32)33-11-14-4-2-1-3-5-14/h1-5,8-9,12-13H,6-7,10-11H2,(H,23,31)(H,24,32)(H,27,28,30) YHCXLJLBRFPWNG-UHFFFAOYSA-N
QVV adenine F1 fragment 'Nc1ncnc2nc[nH]c12' InChI=1S/C5H5N5/c6-4-3-5(9-1-7-3)10-2-8-4/h1-2H,(H3,6,7,8,9,10) GFFGJBXGBJISGV-UHFFFAOYSA-N
QVV amide F2 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
QVV imidazole F3 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
QVV phenyl F4 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
QVV purine F5 fragment 'c1ncc2[nH]cnc2n1' InChI=1S/C5H4N4/c1-4-5(8-2-6-1)9-3-7-4/h1-3H,(H,6,7,8,9) KDCGOANMDULRCW-UHFFFAOYSA-N
QVV pyrimidine F6 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
QVV C15 S1 1
QVV C22 S1 1
QVV C19 S1 1
QVV C20 S1 1
QVV C21 S1 1
QVV C01 S1 1
QVV C02 S1 1
QVV C03 S1 1
QVV C04 S1 1
QVV C05 S1 1
QVV C06 S1 1
QVV C07 S1 1
QVV C18 S1 1
QVV N01 S1 1
QVV N02 S1 1
QVV N03 S1 1
QVV N04 S1 1
QVV N05 S1 1
QVV N06 S1 1
QVV N07 S1 1
QVV N09 S1 1
QVV O01 S1 1
QVV O03 S1 1
QVV C1 S1 1
QVV O1 S1 1
QVV C3 S1 1
QVV C4 S1 1
QVV O2 S1 1
QVV C2 S1 1
QVV C5 S1 1
QVV C6 S1 1
QVV C7 S1 1
QVV C8 S1 1
QVV N09 F1 1
QVV C21 F1 1
QVV C20 F1 1
QVV C19 F1 1
QVV N07 F1 1
QVV C22 F1 1
QVV N05 F1 1
QVV C18 F1 1
QVV N06 F1 1
QVV N08 F1 1
QVV N02 F2 1
QVV C04 F2 1
QVV O03 F2 1
QVV C03 F2 1
QVV C19 F3 1
QVV C20 F3 1
QVV N06 F3 1
QVV C18 F3 1
QVV N05 F3 1
QVV H4 F4 1
QVV H6 F4 1
QVV H7 F4 1
QVV H8 F4 1
QVV H9 F4 1
QVV H10 F4 1
QVV N06 F5 1
QVV C18 F5 1
QVV N05 F5 1
QVV C19 F5 1
QVV C20 F5 1
QVV C21 F5 1
QVV N09 F5 1
QVV C22 F5 1
QVV N07 F5 1
QVV C20 F6 1
QVV C19 F6 1
QVV N07 F6 1
QVV C22 F6 1
QVV N09 F6 1
QVV C21 F6 1
QVV C02 F6 2
QVV C01 F6 2
QVV N01 F6 2
QVV C07 F6 2
QVV N03 F6 2
QVV C03 F6 2
#
_pdbe_chem_comp_rdkit_properties.comp_id QVV
_pdbe_chem_comp_rdkit_properties.exactmw 507.198
_pdbe_chem_comp_rdkit_properties.amw 507.511
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 14
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 6
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 12
_pdbe_chem_comp_rdkit_properties.NumHBD 5
_pdbe_chem_comp_rdkit_properties.NumHBA 11
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 37
_pdbe_chem_comp_rdkit_properties.NumAtoms 62
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 14
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.261
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 244.997
_pdbe_chem_comp_rdkit_properties.tpsa 203.030
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.253
_pdbe_chem_comp_rdkit_properties.CrippenMR 127.050
_pdbe_chem_comp_rdkit_properties.chi0v 17.566
_pdbe_chem_comp_rdkit_properties.chi1v 9.250
_pdbe_chem_comp_rdkit_properties.chi2v 3.888
_pdbe_chem_comp_rdkit_properties.chi3v 3.888
_pdbe_chem_comp_rdkit_properties.chi4v 2.328
_pdbe_chem_comp_rdkit_properties.chi0n 42.566
_pdbe_chem_comp_rdkit_properties.chi1n 21.394
_pdbe_chem_comp_rdkit_properties.chi2n 3.888
_pdbe_chem_comp_rdkit_properties.chi3n 3.888
_pdbe_chem_comp_rdkit_properties.chi4n 2.328
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -5.010
_pdbe_chem_comp_rdkit_properties.kappa1 8.537
_pdbe_chem_comp_rdkit_properties.kappa2 10.312
_pdbe_chem_comp_rdkit_properties.kappa3 5.634
_pdbe_chem_comp_rdkit_properties.Phi 2.379
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
QVV UniChem PDBe QVV
QVV UniChem PubChem 155804514
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
QVV C17 3.227 -1.905 1.294 ETKDGv3 1
QVV C16 2.662 -1.578 3.712 ETKDGv3 2
QVV C15 2.626 -0.919 2.321 ETKDGv3 3
QVV C22 -5.844 -0.345 -3.918 ETKDGv3 4
QVV C19 -5.980 -1.027 -1.668 ETKDGv3 5
QVV C20 -6.166 0.192 -1.240 ETKDGv3 6
QVV C21 -6.204 1.300 -2.202 ETKDGv3 7
QVV C01 -0.804 0.864 2.308 ETKDGv3 8
QVV C02 -1.541 -0.023 1.391 ETKDGv3 9
QVV C03 -0.910 -1.109 0.900 ETKDGv3 10
QVV C04 -1.578 -2.059 -0.013 ETKDGv3 11
QVV C05 -3.691 -3.123 -0.893 ETKDGv3 12
QVV C06 -5.188 -3.222 -0.573 ETKDGv3 13
QVV C07 1.180 -0.576 1.999 ETKDGv3 14
QVV C18 -5.920 -0.996 0.537 ETKDGv3 15
QVV N01 0.558 0.563 2.614 ETKDGv3 16
QVV N02 -2.963 -2.397 0.147 ETKDGv3 17
QVV N03 0.474 -1.349 1.221 ETKDGv3 18
QVV N04 3.443 0.308 2.340 ETKDGv3 19
QVV N05 -5.819 -1.904 -0.570 ETKDGv3 20
QVV N06 -6.128 0.239 0.183 ETKDGv3 21
QVV N07 -5.797 -1.328 -3.057 ETKDGv3 22
QVV N08 -6.390 2.648 -1.776 ETKDGv3 23
QVV N09 -6.054 1.017 -3.469 ETKDGv3 24
QVV O01 -1.358 1.874 2.816 ETKDGv3 25
QVV O02 -2.852 0.279 1.021 ETKDGv3 26
QVV O03 -0.899 -2.613 -0.919 ETKDGv3 27
QVV H1 3.141 -1.509 0.261 ETKDGv3 28
QVV H2 4.303 -2.077 1.511 ETKDGv3 29
QVV H3 2.704 -2.886 1.333 ETKDGv3 30
QVV H4 2.274 -0.879 4.485 ETKDGv3 31
QVV H5 2.039 -2.499 3.728 ETKDGv3 32
QVV H6 3.703 -1.853 3.987 ETKDGv3 33
QVV H7 -5.713 -0.549 -4.972 ETKDGv3 34
QVV H8 -3.272 -4.149 -0.982 ETKDGv3 35
QVV H9 -3.557 -2.609 -1.869 ETKDGv3 36
QVV H10 -5.680 -3.855 -1.342 ETKDGv3 37
QVV H11 -5.335 -3.712 0.414 ETKDGv3 38
QVV H12 -5.810 -1.297 1.570 ETKDGv3 39
QVV H13 1.090 1.171 3.276 ETKDGv3 40
QVV H14 -3.440 -2.160 1.045 ETKDGv3 41
QVV H15 4.003 0.537 3.193 ETKDGv3 42
QVV H18 -6.411 3.425 -2.474 ETKDGv3 43
QVV H19 -6.508 2.875 -0.763 ETKDGv3 44
QVV H20 -3.333 1.097 1.376 ETKDGv3 45
QVV C1 3.546 1.222 1.238 ETKDGv3 46
QVV O1 4.413 2.316 1.340 ETKDGv3 47
QVV C3 4.621 3.251 0.284 ETKDGv3 48
QVV C4 5.408 2.616 -0.829 ETKDGv3 49
QVV O2 2.858 1.050 0.195 ETKDGv3 50
QVV C2 4.842 2.358 -2.023 ETKDGv3 51
QVV C5 5.628 1.710 -3.094 ETKDGv3 52
QVV C6 6.904 1.370 -2.878 ETKDGv3 53
QVV C7 7.530 1.643 -1.568 ETKDGv3 54
QVV C8 6.823 2.233 -0.597 ETKDGv3 55
QVV H16 5.198 4.111 0.682 ETKDGv3 56
QVV H17 3.643 3.646 -0.071 ETKDGv3 57
QVV H21 3.808 2.616 -2.214 ETKDGv3 58
QVV H22 5.167 1.508 -4.052 ETKDGv3 59
QVV H23 7.480 0.893 -3.661 ETKDGv3 60
QVV H24 8.562 1.364 -1.397 ETKDGv3 61
QVV H25 7.286 2.428 0.362 ETKDGv3 62
#