data_R0S
#
_chem_comp.id R0S
_chem_comp.name
4-(5-chloro-2-{[1-(3,4-dimethoxyphenyl)-2-oxo-1,2-dihydro-3H-imidazo[4,5-c]pyridin-3-yl]methyl}-1H-indol-1-yl)butanenitrile
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C27 H24 Cl N5 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2020-01-21
_chem_comp.pdbx_modified_date 2020-05-22
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 501.964
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code R0S
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6VKE
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
R0S C10 C1 C 0 1 N N N N N N 19.526 11.381 15.688 2.990 -0.579 -3.853 C10 R0S 1
R0S C15 C2 C 0 1 N N N N N N 20.051 19.922 18.677 -1.056 0.679 2.214 C15 R0S 2
R0S C17 C3 C 0 1 Y N N N N N 19.484 21.351 20.781 -1.922 -1.094 0.633 C17 R0S 3
R0S C20 C4 C 0 1 Y N N N N N 16.752 22.865 22.974 -4.760 -2.160 -1.702 C20 R0S 4
R0S C22 C5 C 0 1 Y N N N N N 15.692 22.366 22.221 -5.551 -1.037 -1.492 C22 R0S 5
R0S C24 C6 C 0 1 Y N N N N N 17.267 21.319 20.695 -3.920 -0.146 0.020 C24 R0S 6
R0S C26 C7 C 0 1 N N N N N N 16.956 19.929 18.633 -3.727 1.962 1.393 C26 R0S 7
R0S C28 C8 C 0 1 N N N N N N 15.181 18.189 18.160 -3.903 4.399 0.872 C28 R0S 8
R0S C01 C9 C 0 1 N N N N N N 15.527 12.010 15.881 7.856 1.120 -1.646 C01 R0S 9
R0S C03 C10 C 0 1 Y N N N N N 17.292 12.834 17.185 5.572 0.478 -1.471 C03 R0S 10
R0S C04 C11 C 0 1 Y N N N N N 16.831 13.507 18.301 5.673 0.703 -0.108 C04 R0S 11
R0S C05 C12 C 0 1 Y N N N N N 17.514 14.623 18.747 4.575 0.506 0.709 C05 R0S 12
R0S C06 C13 C 0 1 Y N N N N N 18.654 15.069 18.104 3.371 0.082 0.166 C06 R0S 13
R0S C07 C14 C 0 1 Y N N N N N 19.114 14.405 16.977 3.266 -0.144 -1.200 C07 R0S 14
R0S C08 C15 C 0 1 Y N N N N N 18.429 13.280 16.525 4.365 0.054 -2.019 C08 R0S 15
R0S C12 C16 C 0 1 N N N N N N 19.194 17.566 18.059 1.129 0.617 0.992 C12 R0S 16
R0S C16 C17 C 0 1 Y N N N N N 19.107 20.617 19.669 -2.059 0.085 1.260 C16 R0S 17
R0S C18 C18 C 0 1 Y N N N N N 18.314 21.806 21.431 -3.118 -1.282 -0.192 C18 R0S 18
R0S C19 C19 C 0 1 Y N N N N N 18.064 22.593 22.591 -3.549 -2.288 -1.059 C19 R0S 19
R0S C23 C20 C 0 1 Y N N N N N 15.933 21.601 21.092 -5.139 -0.037 -0.640 C23 R0S 20
R0S C27 C21 C 0 1 N N N N N N 16.130 18.777 19.200 -3.311 3.064 0.417 C27 R0S 21
R0S C29 C22 C 0 1 N N N N N N 14.243 17.141 18.756 -3.584 5.440 -0.118 C29 R0S 22
R0S C31 C23 C 0 1 Y N N N N N 20.424 17.742 20.053 0.874 -0.943 2.552 C31 R0S 23
R0S C32 C24 C 0 1 Y N N N N N 21.177 18.140 21.174 0.487 -1.808 3.560 C32 R0S 24
R0S C34 C25 C 0 1 Y N N N N N 21.207 15.952 21.985 2.490 -2.954 3.425 C34 R0S 25
R0S C35 C26 C 0 1 Y N N N N N 20.454 15.480 20.902 2.951 -2.134 2.414 C35 R0S 26
R0S C36 C27 C 0 1 Y N N N N N 20.047 16.390 19.908 2.134 -1.105 1.962 C36 R0S 27
R0S N11 N1 N 0 1 N N N N N N 19.282 16.263 18.651 2.258 -0.117 0.997 N11 R0S 28
R0S N14 N2 N 0 1 N N N N N N 19.904 18.489 18.897 0.275 0.143 1.920 N14 R0S 29
R0S N25 N3 N 0 1 Y N N N N N 17.771 20.595 19.641 -3.245 0.668 0.903 N25 R0S 30
R0S N30 N4 N 0 1 N N N N N N 13.546 16.365 19.201 -3.338 6.244 -0.882 N30 R0S 31
R0S N33 N5 N 0 1 Y N N N N N 21.548 17.247 22.091 1.296 -2.772 3.959 N33 R0S 32
R0S O02 O1 O 0 1 N N N N N N 16.598 11.703 16.730 6.652 0.678 -2.275 O02 R0S 33
R0S O09 O2 O 0 1 N N N N N N 18.877 12.587 15.399 4.265 -0.167 -3.357 O09 R0S 34
R0S O13 O3 O 0 1 N N N N N N 18.637 17.825 17.045 0.915 1.569 0.264 O13 R0S 35
R0S CL21 CL1 CL 0 0 N N N N N N 16.383 23.843 24.424 -5.301 -3.408 -2.781 CL21 R0S 36
R0S H1 H1 H 0 1 N N N N N N 19.845 10.902 14.751 2.721 -1.538 -3.411 H1 R0S 37
R0S H2 H2 H 0 1 N N N N N N 20.407 11.580 16.316 2.240 0.167 -3.590 H2 R0S 38
R0S H3 H3 H 0 1 N N N N N N 18.836 10.713 16.225 3.037 -0.679 -4.938 H3 R0S 39
R0S H4 H4 H 0 1 N N N N N N 21.091 20.230 18.863 -1.044 1.763 2.101 H4 R0S 40
R0S H5 H5 H 0 1 N N N N N N 19.772 20.178 17.644 -1.333 0.424 3.237 H5 R0S 41
R0S H6 H6 H 0 1 N N N N N N 20.499 21.543 21.098 -1.087 -1.773 0.718 H6 R0S 42
R0S H7 H7 H 0 1 N N N N N N 14.676 22.577 22.519 -6.499 -0.948 -2.003 H7 R0S 43
R0S H8 H8 H 0 1 N N N N N N 17.620 19.532 17.851 -3.296 2.163 2.373 H8 R0S 44
R0S H9 H9 H 0 1 N N N N N N 16.271 20.668 18.192 -4.814 1.938 1.472 H9 R0S 45
R0S H10 H10 H 0 1 N N N N N N 15.777 17.718 17.364 -4.985 4.304 0.964 H10 R0S 46
R0S H11 H11 H 0 1 N N N N N N 14.576 19.003 17.733 -3.479 4.674 1.838 H11 R0S 47
R0S H12 H12 H 0 1 N N N N N N 15.031 11.080 15.565 8.636 1.240 -2.398 H12 R0S 48
R0S H13 H13 H 0 1 N N N N N N 14.806 12.646 16.416 7.679 2.075 -1.151 H13 R0S 49
R0S H14 H14 H 0 1 N N N N N N 15.902 12.545 14.996 8.173 0.382 -0.908 H14 R0S 50
R0S H15 H15 H 0 1 N N N N N N 15.947 13.165 18.819 6.609 1.032 0.317 H15 R0S 51
R0S H16 H16 H 0 1 N N N N N N 17.151 15.156 19.613 4.656 0.681 1.772 H16 R0S 52
R0S H17 H17 H 0 1 N N N N N N 19.993 14.756 16.456 2.329 -0.474 -1.623 H17 R0S 53
R0S H18 H18 H 0 1 N N N N N N 18.889 22.978 23.172 -2.937 -3.162 -1.224 H18 R0S 54
R0S H19 H19 H 0 1 N N N N N N 15.106 21.218 20.513 -5.762 0.832 -0.485 H19 R0S 55
R0S H20 H20 H 0 1 N N N N N N 15.539 19.148 20.050 -2.224 3.137 0.394 H20 R0S 56
R0S H21 H21 H 0 1 N N N N N N 16.813 17.987 19.545 -3.680 2.824 -0.581 H21 R0S 57
R0S H22 H22 H 0 1 N N N N N N 21.456 19.177 21.292 -0.481 -1.693 4.023 H22 R0S 58
R0S H23 H23 H 0 1 N N N N N N 21.520 15.259 22.752 3.116 -3.757 3.785 H23 R0S 59
R0S H24 H24 H 0 1 N N N N N N 20.190 14.435 20.831 3.929 -2.289 1.984 H24 R0S 60
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
R0S O09 C10 SING N N 1
R0S O09 C08 SING N N 2
R0S C01 O02 SING N N 3
R0S C08 C07 DOUB Y N 4
R0S C08 C03 SING Y N 5
R0S O02 C03 SING N N 6
R0S C07 C06 SING Y N 7
R0S O13 C12 DOUB N N 8
R0S C03 C04 DOUB Y N 9
R0S C12 N11 SING N N 10
R0S C12 N14 SING N N 11
R0S C06 N11 SING N N 12
R0S C06 C05 DOUB Y N 13
R0S C28 C29 SING N N 14
R0S C28 C27 SING N N 15
R0S C04 C05 SING Y N 16
R0S C26 C27 SING N N 17
R0S C26 N25 SING N N 18
R0S N11 C36 SING N N 19
R0S C15 N14 SING N N 20
R0S C15 C16 SING N N 21
R0S C29 N30 TRIP N N 22
R0S N14 C31 SING N N 23
R0S N25 C16 SING Y N 24
R0S N25 C24 SING Y N 25
R0S C16 C17 DOUB Y N 26
R0S C36 C31 DOUB Y N 27
R0S C36 C35 SING Y N 28
R0S C31 C32 SING Y N 29
R0S C24 C23 DOUB Y N 30
R0S C24 C18 SING Y N 31
R0S C17 C18 SING Y N 32
R0S C35 C34 DOUB Y N 33
R0S C23 C22 SING Y N 34
R0S C32 N33 DOUB Y N 35
R0S C18 C19 DOUB Y N 36
R0S C34 N33 SING Y N 37
R0S C22 C20 DOUB Y N 38
R0S C19 C20 SING Y N 39
R0S C20 CL21 SING N N 40
R0S C10 H1 SING N N 41
R0S C10 H2 SING N N 42
R0S C10 H3 SING N N 43
R0S C15 H4 SING N N 44
R0S C15 H5 SING N N 45
R0S C17 H6 SING N N 46
R0S C22 H7 SING N N 47
R0S C26 H8 SING N N 48
R0S C26 H9 SING N N 49
R0S C28 H10 SING N N 50
R0S C28 H11 SING N N 51
R0S C01 H12 SING N N 52
R0S C01 H13 SING N N 53
R0S C01 H14 SING N N 54
R0S C04 H15 SING N N 55
R0S C05 H16 SING N N 56
R0S C07 H17 SING N N 57
R0S C19 H18 SING N N 58
R0S C23 H19 SING N N 59
R0S C27 H20 SING N N 60
R0S C27 H21 SING N N 61
R0S C32 H22 SING N N 62
R0S C34 H23 SING N N 63
R0S C35 H24 SING N N 64
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
R0S SMILES ACDLabs 12.01 "COc5c(ccc(N4C(N(Cc2cc1c(ccc(Cl)c1)n2CCCC#N)c3cnccc34)=O)c5)OC"
R0S InChI InChI 1.03 InChI=1S/C27H24ClN5O3/c1-35-25-8-6-20(15-26(25)36-2)33-23-9-11-30-16-24(23)32(27(33)34)17-21-14-18-13-19(28)5-7-22(18)31(21)12-4-3-10-29/h5-9,11,13-16H,3-4,12,17H2,1-2H3
R0S InChIKey InChI 1.03 BVLCQPKSGBJPGE-UHFFFAOYSA-N
R0S SMILES_CANONICAL CACTVS 3.385 "COc1ccc(cc1OC)N2C(=O)N(Cc3cc4cc(Cl)ccc4n3CCCC#N)c5cnccc25"
R0S SMILES CACTVS 3.385 "COc1ccc(cc1OC)N2C(=O)N(Cc3cc4cc(Cl)ccc4n3CCCC#N)c5cnccc25"
R0S SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1ccc(cc1OC)N2c3ccncc3N(C2=O)Cc4cc5cc(ccc5n4CCCC#N)Cl"
R0S SMILES "OpenEye OEToolkits" 2.0.7 "COc1ccc(cc1OC)N2c3ccncc3N(C2=O)Cc4cc5cc(ccc5n4CCCC#N)Cl"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
R0S "SYSTEMATIC NAME" ACDLabs 12.01 4-(5-chloro-2-{[1-(3,4-dimethoxyphenyl)-2-oxo-1,2-dihydro-3H-imidazo[4,5-c]pyridin-3-yl]methyl}-1H-indol-1-yl)butanenitrile
R0S "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 4-[5-chloranyl-2-[[1-(3,4-dimethoxyphenyl)-2-oxidanylidene-imidazo[4,5-c]pyridin-3-yl]methyl]indol-1-yl]butanenitrile
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
R0S 'Create component' 2020-01-21 RCSB
R0S 'Initial release' 2020-05-27 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
R0S C10 C 13.121 7.535 1
R0S C15 C 9.253 -1.200 2
R0S C17 C 6.769 -2.162 3
R0S C20 C 4.426 -5.458 4
R0S C22 C 5.542 -6.460 5
R0S C24 C 7.277 -4.526 6
R0S C26 C 9.938 -4.380 7
R0S C28 C 11.472 -6.477 8
R0S C01 C 9.650 9.459 9
R0S C03 C 10.185 6.917 10
R0S C04 C 8.718 6.607 11
R0S C05 C 8.252 5.182 12
R0S C06 C 9.253 4.065 13
R0S C07 C 10.721 4.375 14
R0S C08 C 11.187 5.800 15
R0S C12 C 9.663 1.432 16
R0S C16 C 8.252 -2.317 17
R0S C18 C 6.161 -3.524 18
R0S C19 C 4.735 -3.990 19
R0S C23 C 6.968 -5.994 20
R0S C27 C 10.100 -5.871 21
R0S C29 C 11.634 -7.968 22
R0S C31 C 7.368 0.682 23
R0S C32 C 6.069 -0.068 24
R0S C34 C 4.770 2.182 25
R0S C35 C 6.069 2.932 26
R0S C36 C 7.368 2.182 27
R0S N11 N 8.787 2.639 28
R0S N14 N 8.787 0.225 29
R0S N25 N 8.566 -3.775 30
R0S N30 N 11.796 -9.459 31
R0S N33 N 4.770 0.682 32
R0S O02 O 10.651 8.343 33
R0S O09 O 12.655 6.110 34
R0S O13 O 11.163 1.432 35
R0S CL21 Cl 3.000 -5.924 36
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
R0S O09 C10 SINGLE NONE 1
R0S O09 C08 SINGLE NONE 2
R0S C01 O02 SINGLE NONE 3
R0S C08 C07 SINGLE NONE 4
R0S C08 C03 DOUBLE NONE 5
R0S O02 C03 SINGLE NONE 6
R0S C07 C06 DOUBLE NONE 7
R0S O13 C12 DOUBLE NONE 8
R0S C03 C04 SINGLE NONE 9
R0S C12 N11 SINGLE NONE 10
R0S C12 N14 SINGLE NONE 11
R0S C06 N11 SINGLE NONE 12
R0S C06 C05 SINGLE NONE 13
R0S C28 C29 SINGLE NONE 14
R0S C28 C27 SINGLE NONE 15
R0S C04 C05 DOUBLE NONE 16
R0S C26 C27 SINGLE NONE 17
R0S C26 N25 SINGLE NONE 18
R0S N11 C36 SINGLE NONE 19
R0S C15 N14 SINGLE NONE 20
R0S C15 C16 SINGLE NONE 21
R0S C29 N30 TRIPLE NONE 22
R0S N14 C31 SINGLE NONE 23
R0S N25 C16 SINGLE NONE 24
R0S N25 C24 SINGLE NONE 25
R0S C16 C17 DOUBLE NONE 26
R0S C36 C31 DOUBLE NONE 27
R0S C36 C35 SINGLE NONE 28
R0S C31 C32 SINGLE NONE 29
R0S C24 C23 SINGLE NONE 30
R0S C24 C18 DOUBLE NONE 31
R0S C17 C18 SINGLE NONE 32
R0S C35 C34 DOUBLE NONE 33
R0S C23 C22 DOUBLE NONE 34
R0S C32 N33 DOUBLE NONE 35
R0S C18 C19 SINGLE NONE 36
R0S C34 N33 SINGLE NONE 37
R0S C22 C20 SINGLE NONE 38
R0S C19 C20 DOUBLE NONE 39
R0S C20 CL21 SINGLE NONE 40
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
R0S MurckoScaffold S1 scaffold 'O=c1n(Cc2cc3ccccc3[nH]2)c2cnccc2n1-c1ccccc1' InChI=1S/C21H16N4O/c26-21-24(14-16-12-15-6-4-5-9-18(15)23-16)20-13-22-11-10-19(20)25(21)17-7-2-1-3-8-17/h1-13,23H,14H2 DXHWPSHEWNBEPU-UHFFFAOYSA-N
R0S imidazole F1 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
R0S indole F2 fragment 'c1ccc2[nH]ccc2c1' InChI=1S/C8H7N/c1-2-4-8-7(3-1)5-6-9-8/h1-6,9H SIKJAQJRHWYJAI-UHFFFAOYSA-N
R0S phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
R0S pyridine F4 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
R0S pyrrole F5 fragment 'c1cc[nH]c1' InChI=1S/C4H5N/c1-2-4-5-3-1/h1-5H KAESVJOAVNADME-UHFFFAOYSA-N
R0S Z56969320 F6 fragment Oc1ccc(-n2ccnc2)cc1 InChI=1S/C9H8N2O/c12-9-3-1-8(2-4-9)11-6-5-10-7-11/h1-7,12H CYKCUAPYWQDIKR-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
R0S C15 S1 1
R0S C17 S1 1
R0S C20 S1 1
R0S C22 S1 1
R0S C24 S1 1
R0S C03 S1 1
R0S C04 S1 1
R0S C05 S1 1
R0S C06 S1 1
R0S C07 S1 1
R0S C08 S1 1
R0S C12 S1 1
R0S C16 S1 1
R0S C18 S1 1
R0S C19 S1 1
R0S C23 S1 1
R0S C31 S1 1
R0S C32 S1 1
R0S C34 S1 1
R0S C35 S1 1
R0S C36 S1 1
R0S N11 S1 1
R0S N14 S1 1
R0S N25 S1 1
R0S N33 S1 1
R0S O13 S1 1
R0S C31 F1 1
R0S C36 F1 1
R0S N11 F1 1
R0S C12 F1 1
R0S N14 F1 1
R0S C24 F2 1
R0S C18 F2 1
R0S C17 F2 1
R0S C16 F2 1
R0S N25 F2 1
R0S C19 F2 1
R0S C20 F2 1
R0S C22 F2 1
R0S C23 F2 1
R0S C20 F3 1
R0S C22 F3 1
R0S C23 F3 1
R0S C24 F3 1
R0S C18 F3 1
R0S C19 F3 1
R0S C03 F3 2
R0S C08 F3 2
R0S C07 F3 2
R0S C06 F3 2
R0S C05 F3 2
R0S C04 F3 2
R0S C32 F4 1
R0S C31 F4 1
R0S C36 F4 1
R0S C35 F4 1
R0S C34 F4 1
R0S N33 F4 1
R0S C24 F5 1
R0S C18 F5 1
R0S C17 F5 1
R0S C16 F5 1
R0S N25 F5 1
R0S O02 F6 1
R0S C03 F6 1
R0S C08 F6 1
R0S C07 F6 1
R0S C06 F6 1
R0S C05 F6 1
R0S C04 F6 1
R0S N11 F6 1
R0S C36 F6 1
R0S C31 F6 1
R0S N14 F6 1
R0S C12 F6 1
#
_pdbe_chem_comp_rdkit_properties.comp_id R0S
_pdbe_chem_comp_rdkit_properties.exactmw 501.157
_pdbe_chem_comp_rdkit_properties.amw 501.974
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 8
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 0
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 10
_pdbe_chem_comp_rdkit_properties.NumHBD 0
_pdbe_chem_comp_rdkit_properties.NumHBA 8
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 36
_pdbe_chem_comp_rdkit_properties.NumAtoms 60
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 9
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.222
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 5
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 245.755
_pdbe_chem_comp_rdkit_properties.tpsa 87
_pdbe_chem_comp_rdkit_properties.CrippenClogP 4.038
_pdbe_chem_comp_rdkit_properties.CrippenMR 132.880
_pdbe_chem_comp_rdkit_properties.chi0v 18.095
_pdbe_chem_comp_rdkit_properties.chi1v 9.771
_pdbe_chem_comp_rdkit_properties.chi2v 4.752
_pdbe_chem_comp_rdkit_properties.chi3v 4.752
_pdbe_chem_comp_rdkit_properties.chi4v 3.288
_pdbe_chem_comp_rdkit_properties.chi0n 41.339
_pdbe_chem_comp_rdkit_properties.chi1n 21.393
_pdbe_chem_comp_rdkit_properties.chi2n 4.563
_pdbe_chem_comp_rdkit_properties.chi3n 4.563
_pdbe_chem_comp_rdkit_properties.chi4n 3.146
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -4.220
_pdbe_chem_comp_rdkit_properties.kappa1 8.425
_pdbe_chem_comp_rdkit_properties.kappa2 9.799
_pdbe_chem_comp_rdkit_properties.kappa3 4.077
_pdbe_chem_comp_rdkit_properties.Phi 2.293
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
R0S UniChem ChEMBL CHEMBL4645289
R0S UniChem PDBe R0S
R0S UniChem SureChEMBL SCHEMBL16653211
R0S UniChem PubChem 118023813
R0S UniChem BindingDb 50542668
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
R0S C10 6.790 -1.101 0.449 ETKDGv3 1
R0S C15 -1.716 0.795 2.326 ETKDGv3 2
R0S C17 -2.915 -1.040 1.116 ETKDGv3 3
R0S C20 -4.510 -2.342 -2.097 ETKDGv3 4
R0S C22 -4.359 -1.067 -2.860 ETKDGv3 5
R0S C24 -3.329 -0.109 -0.889 ETKDGv3 6
R0S C26 -2.669 2.325 -0.373 ETKDGv3 7
R0S C28 -4.628 2.961 1.169 ETKDGv3 8
R0S C01 5.078 0.373 -4.595 ETKDGv3 9
R0S C03 4.471 0.022 -2.200 ETKDGv3 10
R0S C04 3.049 0.406 -2.410 ETKDGv3 11
R0S C05 2.188 0.398 -1.387 ETKDGv3 12
R0S C06 2.639 0.005 -0.033 ETKDGv3 13
R0S C07 3.922 -0.335 0.161 ETKDGv3 14
R0S C08 4.888 -0.334 -0.972 ETKDGv3 15
R0S C12 0.627 0.904 1.277 ETKDGv3 16
R0S C16 -2.483 0.222 1.166 ETKDGv3 17
R0S C18 -3.464 -1.235 -0.218 ETKDGv3 18
R0S C19 -4.079 -2.427 -0.825 ETKDGv3 19
R0S C23 -3.792 0.009 -2.285 ETKDGv3 20
R0S C27 -4.068 2.955 -0.260 ETKDGv3 21
R0S C29 -3.868 3.865 2.042 ETKDGv3 22
R0S C31 0.244 -0.863 2.562 ETKDGv3 23
R0S C32 -0.345 -1.906 3.419 ETKDGv3 24
R0S C34 1.478 -3.345 2.781 ETKDGv3 25
R0S C35 2.036 -2.410 1.993 ETKDGv3 26
R0S C36 1.372 -1.095 1.908 ETKDGv3 27
R0S N11 1.716 0.006 1.066 ETKDGv3 28
R0S N14 -0.308 0.414 2.239 ETKDGv3 29
R0S N25 -2.701 0.888 -0.089 ETKDGv3 30
R0S N30 -3.269 4.576 2.730 ETKDGv3 31
R0S N33 0.258 -3.061 3.505 ETKDGv3 32
R0S O02 5.396 0.019 -3.254 ETKDGv3 33
R0S O09 6.231 -0.696 -0.795 ETKDGv3 34
R0S O13 0.506 2.008 0.683 ETKDGv3 35
R0S CL21 -5.250 -3.732 -2.868 ETKDGv3 36
R0S H1 7.864 -1.339 0.304 ETKDGv3 37
R0S H2 6.272 -2.010 0.823 ETKDGv3 38
R0S H3 6.705 -0.280 1.192 ETKDGv3 39
R0S H4 -2.147 0.426 3.281 ETKDGv3 40
R0S H5 -1.799 1.899 2.346 ETKDGv3 41
R0S H6 -2.838 -1.780 1.901 ETKDGv3 42
R0S H7 -4.708 -1.008 -3.883 ETKDGv3 43
R0S H8 -2.295 2.475 -1.408 ETKDGv3 44
R0S H9 -1.956 2.845 0.297 ETKDGv3 45
R0S H10 -4.624 1.938 1.598 ETKDGv3 46
R0S H11 -5.681 3.312 1.140 ETKDGv3 47
R0S H12 5.991 0.285 -5.220 ETKDGv3 48
R0S H13 4.719 1.423 -4.637 ETKDGv3 49
R0S H14 4.304 -0.313 -4.998 ETKDGv3 50
R0S H15 2.692 0.691 -3.390 ETKDGv3 51
R0S H16 1.153 0.664 -1.559 ETKDGv3 52
R0S H17 4.256 -0.593 1.157 ETKDGv3 53
R0S H18 -4.179 -3.343 -0.258 ETKDGv3 54
R0S H19 -3.679 0.933 -2.835 ETKDGv3 55
R0S H20 -4.773 2.401 -0.916 ETKDGv3 56
R0S H21 -4.024 3.999 -0.640 ETKDGv3 57
R0S H22 -1.258 -1.729 3.970 ETKDGv3 58
R0S H23 1.936 -4.321 2.868 ETKDGv3 59
R0S H24 2.936 -2.629 1.435 ETKDGv3 60
#