data_R32
#
_chem_comp.id R32
_chem_comp.name
(2S,4S,5S)-5-amino-N-(3-amino-2,2-dimethyl-3-oxopropyl)-6-[4-(2-chlorophenyl)-2,2-dimethyl-5-oxopiperazin-1-yl]-4-hydroxy-2-(propan-2-yl)hexanamide
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C26 H42 Cl N5 O4"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2012-05-30
_chem_comp.pdbx_modified_date 2012-07-20
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 524.096
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code R32
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 3VSX
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
R32 C1 C1 C 0 1 Y N N N N N -57.835 -161.078 -136.486 -6.888 -0.981 1.861 C1 R32 1
R32 C2 C2 C 0 1 Y N N N N N -58.646 -160.112 -137.069 -6.530 -0.702 0.549 C2 R32 2
R32 C3 C3 C 0 1 Y N N N N N -58.424 -158.782 -136.762 -7.437 -0.931 -0.479 C3 R32 3
R32 C4 C4 C 0 1 Y N N N N N -57.424 -158.383 -135.894 -8.692 -1.435 -0.191 C4 R32 4
R32 C5 C5 C 0 1 Y N N N N N -56.616 -159.352 -135.314 -9.044 -1.712 1.117 C5 R32 5
R32 C6 C6 C 0 1 Y N N N N N -56.822 -160.696 -135.609 -8.143 -1.485 2.142 C6 R32 6
R32 N7 N7 N 0 1 N N N N N N -59.649 -160.527 -137.938 -5.259 -0.191 0.262 N7 R32 7
R32 CL1 CL1 CL 0 0 N N N N N N -59.429 -157.577 -137.482 -6.996 -0.584 -2.121 CL1 R32 8
R32 C9 C9 C 0 1 N N N N N N -59.284 -160.969 -139.294 -5.075 1.258 0.256 C9 R32 9
R32 C10 C10 C 0 1 N N N N N N -60.380 -160.778 -140.322 -3.790 1.619 -0.492 C10 R32 10
R32 N11 N11 N 0 1 N N N N N N -61.595 -161.379 -139.786 -2.688 0.801 0.038 N11 R32 11
R32 C12 C12 C 0 1 N N N N N N -62.048 -160.965 -138.474 -2.875 -0.606 -0.339 C12 R32 12
R32 C13 C13 C 0 1 N N N N N N -60.955 -160.509 -137.498 -4.267 -1.051 0.010 C13 R32 13
R32 O14 O14 O 0 1 N N N N N N -61.272 -160.148 -136.377 -4.499 -2.240 0.071 O14 R32 14
R32 C15 C15 C 0 1 N N N N N N -59.984 -161.468 -141.631 -3.475 3.102 -0.283 C15 R32 15
R32 C16 C16 C 0 1 N N N N N N -60.595 -159.286 -140.582 -3.968 1.335 -1.985 C16 R32 16
R32 C17 C17 C 0 1 N N N N N N -62.628 -161.818 -140.711 -1.388 1.303 -0.427 C17 R32 17
R32 C18 C18 C 0 1 N N S N N N -63.431 -162.994 -140.143 -0.265 0.500 0.232 C18 R32 18
R32 C19 C19 C 0 1 N N S N N N -64.804 -163.138 -140.801 1.087 1.102 -0.155 C19 R32 19
R32 C20 C20 C 0 1 N N N N N N -65.789 -164.005 -139.999 2.210 0.299 0.505 C20 R32 20
R32 C21 C21 C 0 1 N N S N N N -67.110 -164.238 -140.755 3.560 0.765 -0.043 C21 R32 21
R32 C22 C22 C 0 1 N N N N N N -67.818 -162.890 -140.985 4.645 -0.165 0.436 C22 R32 22
R32 N23 N23 N 0 1 N N N N N N -67.945 -162.583 -142.289 5.864 -0.130 -0.138 N23 R32 23
R32 C24 C24 C 0 1 N N N N N N -68.592 -161.330 -142.617 6.869 -1.136 0.216 C24 R32 24
R32 C25 C25 C 0 1 N N N N N N -69.871 -161.598 -143.417 8.154 -0.872 -0.571 C25 R32 25
R32 N26 N26 N 0 1 N N N N N N -62.667 -164.234 -140.155 -0.422 0.547 1.692 N26 R32 26
R32 O27 O27 O 0 1 N N N N N N -64.672 -163.624 -142.111 1.149 2.459 0.287 O27 R32 27
R32 C28 C28 C 0 1 N N N N N N -68.051 -165.260 -140.084 3.849 2.184 0.452 C28 R32 28
R32 O29 O29 O 0 1 N N N N N N -68.207 -162.189 -140.054 4.421 -0.944 1.338 O29 R32 29
R32 C30 C30 C 0 1 N N N N N N -67.401 -166.628 -139.874 4.003 2.171 1.975 C30 R32 30
R32 C31 C31 C 0 1 N N N N N N -69.394 -165.377 -140.799 5.143 2.693 -0.186 C31 R32 31
R32 C32 C32 C 0 1 N N N N N N -69.460 -162.154 -144.786 9.188 -1.906 -0.207 C32 R32 32
R32 C33 C33 C 0 1 N N N N N N -70.651 -160.297 -143.637 7.860 -0.951 -2.070 C33 R32 33
R32 C34 C34 C 0 1 N N N N N N -70.755 -162.643 -142.720 8.685 0.522 -0.228 C34 R32 34
R32 N35 N35 N 0 1 N N N N N N -68.722 -161.287 -145.515 10.407 -1.872 -0.780 N35 R32 35
R32 O36 O36 O 0 1 N N N N N N -69.776 -163.284 -145.141 8.923 -2.770 0.603 O36 R32 36
R32 H1 H1 H 0 1 N N N N N N -57.990 -162.123 -136.712 -6.183 -0.808 2.662 H1 R32 37
R32 H2 H2 H 0 1 N N N N N N -57.274 -157.337 -135.671 -9.398 -1.613 -0.989 H2 R32 38
R32 H3 H3 H 0 1 N N N N N N -55.828 -159.063 -134.634 -10.024 -2.105 1.340 H3 R32 39
R32 H4 H4 H 0 1 N N N N N N -56.193 -161.448 -135.155 -8.420 -1.706 3.162 H4 R32 40
R32 H5 H5 H 0 1 N N N N N N -59.032 -162.039 -139.253 -5.925 1.728 -0.237 H5 R32 41
R32 H6 H6 H 0 1 N N N N N N -58.402 -160.397 -139.618 -5.007 1.618 1.282 H6 R32 42
R32 H8 H8 H 0 1 N N N N N N -62.749 -160.128 -138.609 -2.718 -0.717 -1.412 H8 R32 43
R32 H9 H9 H 0 1 N N N N N N -62.575 -161.815 -138.016 -2.153 -1.223 0.197 H9 R32 44
R32 H10 H10 H 0 1 N N N N N N -59.829 -162.541 -141.448 -2.541 3.349 -0.787 H10 R32 45
R32 H11 H11 H 0 1 N N N N N N -60.786 -161.335 -142.372 -4.282 3.707 -0.697 H11 R32 46
R32 H12 H12 H 0 1 N N N N N N -59.054 -161.023 -142.013 -3.378 3.306 0.783 H12 R32 47
R32 H13 H13 H 0 1 N N N N N N -60.880 -158.787 -139.644 -4.199 0.279 -2.128 H13 R32 48
R32 H14 H14 H 0 1 N N N N N N -59.664 -158.843 -140.965 -4.785 1.942 -2.376 H14 R32 49
R32 H15 H15 H 0 1 N N N N N N -61.396 -159.155 -141.324 -3.047 1.581 -2.514 H15 R32 50
R32 H16 H16 H 0 1 N N N N N N -62.154 -162.131 -141.653 -1.324 1.195 -1.510 H16 R32 51
R32 H17 H17 H 0 1 N N N N N N -63.313 -160.979 -140.906 -1.288 2.355 -0.160 H17 R32 52
R32 H18 H18 H 0 1 N N N N N N -63.624 -162.748 -139.088 -0.312 -0.535 -0.105 H18 R32 53
R32 H19 H19 H 0 1 N N N N N N -65.240 -162.129 -140.849 1.204 1.067 -1.238 H19 R32 54
R32 H20 H20 H 0 1 N N N N N N -65.320 -164.979 -139.797 2.183 0.454 1.584 H20 R32 55
R32 H21 H21 H 0 1 N N N N N N -66.010 -163.501 -139.047 2.076 -0.761 0.287 H21 R32 56
R32 H22 H22 H 0 1 N N N N N N -66.850 -164.640 -141.745 3.532 0.760 -1.133 H22 R32 57
R32 H23 H23 H 0 1 N N N N N N -67.606 -163.196 -143.003 6.076 0.560 -0.785 H23 R32 58
R32 H24 H24 H 0 1 N N N N N N -67.908 -160.713 -143.218 7.079 -1.079 1.284 H24 R32 59
R32 H25 H25 H 0 1 N N N N N N -68.847 -160.797 -141.689 6.491 -2.129 -0.028 H25 R32 60
R32 H26 H26 H 0 1 N N N N N N -61.782 -164.085 -139.715 -0.382 1.497 2.030 H26 R32 61
R32 H27 H27 H 0 1 N N N N N N -63.171 -164.941 -139.659 -1.279 0.097 1.978 H27 R32 62
R32 H29 H29 H 0 1 N N N N N N -65.532 -163.708 -142.506 0.977 2.573 1.232 H29 R32 63
R32 H30 H30 H 0 1 N N N N N N -68.268 -164.864 -139.081 3.024 2.840 0.176 H30 R32 64
R32 H31 H31 H 0 1 N N N N N N -66.438 -166.502 -139.357 4.880 1.585 2.247 H31 R32 65
R32 H32 H32 H 0 1 N N N N N N -68.064 -167.259 -139.264 4.122 3.193 2.336 H32 R32 66
R32 H33 H33 H 0 1 N N N N N N -67.233 -167.108 -140.850 3.115 1.727 2.425 H33 R32 67
R32 H34 H34 H 0 1 N N N N N N -70.023 -166.116 -140.281 5.049 2.663 -1.272 H34 R32 68
R32 H35 H35 H 0 1 N N N N N N -69.898 -164.399 -140.794 5.326 3.719 0.134 H35 R32 69
R32 H36 H36 H 0 1 N N N N N N -69.229 -165.700 -141.838 5.975 2.061 0.124 H36 R32 70
R32 H37 H37 H 0 1 N N N N N N -70.955 -159.882 -142.665 8.775 -0.763 -2.631 H37 R32 71
R32 H38 H38 H 0 1 N N N N N N -70.012 -159.571 -144.162 7.482 -1.944 -2.314 H38 R32 72
R32 H39 H39 H 0 1 N N N N N N -71.545 -160.504 -144.243 7.112 -0.203 -2.333 H39 R32 73
R32 H40 H40 H 0 1 N N N N N N -71.062 -162.265 -141.734 8.895 0.578 0.840 H40 R32 74
R32 H41 H41 H 0 1 N N N N N N -71.648 -162.836 -143.333 9.600 0.710 -0.789 H41 R32 75
R32 H42 H42 H 0 1 N N N N N N -70.188 -163.577 -142.594 7.937 1.270 -0.492 H42 R32 76
R32 H43 H43 H 0 1 N N N N N N -68.389 -161.552 -146.420 10.619 -1.181 -1.428 H43 R32 77
R32 H44 H44 H 0 1 N N N N N N -68.509 -160.381 -145.149 11.072 -2.537 -0.546 H44 R32 78
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
R32 N35 C32 SING N N 1
R32 O36 C32 DOUB N N 2
R32 C32 C25 SING N N 3
R32 C33 C25 SING N N 4
R32 C25 C34 SING N N 5
R32 C25 C24 SING N N 6
R32 C24 N23 SING N N 7
R32 N23 C22 SING N N 8
R32 O27 C19 SING N N 9
R32 C15 C10 SING N N 10
R32 C22 C21 SING N N 11
R32 C22 O29 DOUB N N 12
R32 C19 C18 SING N N 13
R32 C19 C20 SING N N 14
R32 C31 C28 SING N N 15
R32 C21 C28 SING N N 16
R32 C21 C20 SING N N 17
R32 C17 C18 SING N N 18
R32 C17 N11 SING N N 19
R32 C16 C10 SING N N 20
R32 C10 N11 SING N N 21
R32 C10 C9 SING N N 22
R32 N26 C18 SING N N 23
R32 C28 C30 SING N N 24
R32 N11 C12 SING N N 25
R32 C9 N7 SING N N 26
R32 C12 C13 SING N N 27
R32 N7 C13 SING N N 28
R32 N7 C2 SING N N 29
R32 C13 O14 DOUB N N 30
R32 CL1 C3 SING N N 31
R32 C2 C3 DOUB Y N 32
R32 C2 C1 SING Y N 33
R32 C3 C4 SING Y N 34
R32 C1 C6 DOUB Y N 35
R32 C4 C5 DOUB Y N 36
R32 C6 C5 SING Y N 37
R32 C1 H1 SING N N 38
R32 C4 H2 SING N N 39
R32 C5 H3 SING N N 40
R32 C6 H4 SING N N 41
R32 C9 H5 SING N N 42
R32 C9 H6 SING N N 43
R32 C12 H8 SING N N 44
R32 C12 H9 SING N N 45
R32 C15 H10 SING N N 46
R32 C15 H11 SING N N 47
R32 C15 H12 SING N N 48
R32 C16 H13 SING N N 49
R32 C16 H14 SING N N 50
R32 C16 H15 SING N N 51
R32 C17 H16 SING N N 52
R32 C17 H17 SING N N 53
R32 C18 H18 SING N N 54
R32 C19 H19 SING N N 55
R32 C20 H20 SING N N 56
R32 C20 H21 SING N N 57
R32 C21 H22 SING N N 58
R32 N23 H23 SING N N 59
R32 C24 H24 SING N N 60
R32 C24 H25 SING N N 61
R32 N26 H26 SING N N 62
R32 N26 H27 SING N N 63
R32 O27 H29 SING N N 64
R32 C28 H30 SING N N 65
R32 C30 H31 SING N N 66
R32 C30 H32 SING N N 67
R32 C30 H33 SING N N 68
R32 C31 H34 SING N N 69
R32 C31 H35 SING N N 70
R32 C31 H36 SING N N 71
R32 C33 H37 SING N N 72
R32 C33 H38 SING N N 73
R32 C33 H39 SING N N 74
R32 C34 H40 SING N N 75
R32 C34 H41 SING N N 76
R32 C34 H42 SING N N 77
R32 N35 H43 SING N N 78
R32 N35 H44 SING N N 79
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
R32 SMILES ACDLabs 12.01 O=C(N)C(C)(C)CNC(=O)C(C(C)C)CC(O)C(N)CN1C(CN(C(=O)C1)c2ccccc2Cl)(C)C
R32 InChI InChI 1.03 InChI=1S/C26H42ClN5O4/c1-16(2)17(23(35)30-14-25(3,4)24(29)36)11-21(33)19(28)12-31-13-22(34)32(15-26(31,5)6)20-10-8-7-9-18(20)27/h7-10,16-17,19,21,33H,11-15,28H2,1-6H3,(H2,29,36)(H,30,35)/t17-,19-,21-/m0/s1
R32 InChIKey InChI 1.03 RBIIKVXVYVANCQ-CUWPLCDZSA-N
R32 SMILES_CANONICAL CACTVS 3.370 CC(C)[C@H](C[C@H](O)[C@@H](N)CN1CC(=O)N(CC1(C)C)c2ccccc2Cl)C(=O)NCC(C)(C)C(N)=O
R32 SMILES CACTVS 3.370 CC(C)[CH](C[CH](O)[CH](N)CN1CC(=O)N(CC1(C)C)c2ccccc2Cl)C(=O)NCC(C)(C)C(N)=O
R32 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 CC(C)[C@H](C[C@@H]([C@H](CN1CC(=O)N(CC1(C)C)c2ccccc2Cl)N)O)C(=O)NCC(C)(C)C(=O)N
R32 SMILES "OpenEye OEToolkits" 1.7.6 CC(C)C(CC(C(CN1CC(=O)N(CC1(C)C)c2ccccc2Cl)N)O)C(=O)NCC(C)(C)C(=O)N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
R32 "SYSTEMATIC NAME" ACDLabs 12.01 "(2S,4S,5S)-5-amino-N-(3-amino-2,2-dimethyl-3-oxopropyl)-6-[4-(2-chlorophenyl)-2,2-dimethyl-5-oxopiperazin-1-yl]-4-hydroxy-2-(propan-2-yl)hexanamide (non-preferred name)"
R32 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 (2S,4S,5S)-5-azanyl-N-(3-azanyl-2,2-dimethyl-3-oxidanylidene-propyl)-6-[4-(2-chlorophenyl)-2,2-dimethyl-5-oxidanylidene-piperazin-1-yl]-4-oxidanyl-2-propan-2-yl-hexanamide
#
_pdbx_chem_comp_audit.comp_id R32
_pdbx_chem_comp_audit.action_type 'Create component'
_pdbx_chem_comp_audit.date 2012-05-30
_pdbx_chem_comp_audit.processing_site PDBJ
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
R32 C1 C 11.600 -8.340 1
R32 C2 C 10.301 -7.590 2
R32 C3 C 9.002 -8.340 3
R32 C4 C 9.002 -9.840 4
R32 C5 C 10.301 -10.590 5
R32 C6 C 11.600 -9.840 6
R32 N7 N 10.301 -6.090 7
R32 CL1 Cl 7.702 -7.590 8
R32 C9 C 11.600 -5.340 9
R32 C10 C 11.600 -3.840 10
R32 N11 N 10.301 -3.090 11
R32 C12 C 9.002 -3.840 12
R32 C13 C 9.002 -5.340 13
R32 O14 O 7.702 -6.090 14
R32 C15 C 12.350 -2.541 15
R32 C16 C 13.100 -3.840 16
R32 C17 C 10.301 -1.590 17
R32 C18 C 9.002 -0.840 18
R32 C19 C 9.002 0.660 19
R32 C20 C 7.702 1.410 20
R32 C21 C 7.702 2.910 21
R32 C22 C 6.404 3.660 22
R32 N23 N 6.404 5.160 23
R32 C24 C 5.104 5.910 24
R32 C25 C 5.104 7.410 25
R32 N26 N 7.702 -1.590 26
R32 O27 O 10.301 1.410 27
R32 C28 C 9.002 3.660 28
R32 O29 O 5.104 2.910 29
R32 C30 C 10.301 2.910 30
R32 C31 C 9.002 5.160 31
R32 C32 C 5.104 8.910 32
R32 C33 C 3.604 7.410 33
R32 C34 C 6.604 7.410 34
R32 N35 N 6.404 9.660 35
R32 O36 O 3.805 9.660 36
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
R32 N35 C32 SINGLE NONE 1
R32 O36 C32 DOUBLE NONE 2
R32 C32 C25 SINGLE NONE 3
R32 C33 C25 SINGLE NONE 4
R32 C25 C34 SINGLE NONE 5
R32 C25 C24 SINGLE NONE 6
R32 C24 N23 SINGLE NONE 7
R32 N23 C22 SINGLE NONE 8
R32 C19 O27 SINGLE BEGINDASH 9
R32 C15 C10 SINGLE NONE 10
R32 C22 C21 SINGLE NONE 11
R32 C22 O29 DOUBLE NONE 12
R32 C19 C18 SINGLE NONE 13
R32 C19 C20 SINGLE NONE 14
R32 C31 C28 SINGLE NONE 15
R32 C21 C28 SINGLE NONE 16
R32 C21 C20 SINGLE BEGINDASH 17
R32 C17 C18 SINGLE NONE 18
R32 C17 N11 SINGLE NONE 19
R32 C16 C10 SINGLE NONE 20
R32 C10 N11 SINGLE NONE 21
R32 C10 C9 SINGLE NONE 22
R32 C18 N26 SINGLE BEGINDASH 23
R32 C28 C30 SINGLE NONE 24
R32 N11 C12 SINGLE NONE 25
R32 C9 N7 SINGLE NONE 26
R32 C12 C13 SINGLE NONE 27
R32 N7 C13 SINGLE NONE 28
R32 N7 C2 SINGLE NONE 29
R32 C13 O14 DOUBLE NONE 30
R32 CL1 C3 SINGLE NONE 31
R32 C2 C3 SINGLE NONE 32
R32 C2 C1 DOUBLE NONE 33
R32 C3 C4 DOUBLE NONE 34
R32 C1 C6 SINGLE NONE 35
R32 C4 C5 SINGLE NONE 36
R32 C6 C5 DOUBLE NONE 37
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
R32 MurckoScaffold S1 scaffold O=C1CNCCN1c1ccccc1 InChI=1S/C10H12N2O/c13-10-8-11-6-7-12(10)9-4-2-1-3-5-9/h1-5,11H,6-8H2 YWUNGYFXNDOGNZ-UHFFFAOYSA-N
R32 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
R32 peptide F2 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
R32 phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
R32 piperazine F4 fragment C1CNCCN1 InChI=1S/C4H10N2/c1-2-6-4-3-5-1/h5-6H,1-4H2 GLUUGHFHXGJENI-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
R32 C1 S1 1
R32 C2 S1 1
R32 C3 S1 1
R32 C4 S1 1
R32 C5 S1 1
R32 C6 S1 1
R32 N7 S1 1
R32 C9 S1 1
R32 C10 S1 1
R32 N11 S1 1
R32 C12 S1 1
R32 C13 S1 1
R32 O14 S1 1
R32 N7 F1 1
R32 C13 F1 1
R32 O14 F1 1
R32 C12 F1 1
R32 N23 F1 2
R32 C22 F1 2
R32 O29 F1 2
R32 C21 F1 2
R32 N35 F1 3
R32 C32 F1 3
R32 O36 F1 3
R32 C25 F1 3
R32 O14 F2 1
R32 C13 F2 1
R32 C12 F2 1
R32 N11 F2 1
R32 C1 F3 1
R32 C2 F3 1
R32 C3 F3 1
R32 C4 F3 1
R32 C5 F3 1
R32 C6 F3 1
R32 N7 F4 1
R32 C9 F4 1
R32 C10 F4 1
R32 N11 F4 1
R32 C12 F4 1
R32 C13 F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id R32
_pdbe_chem_comp_rdkit_properties.exactmw 523.293
_pdbe_chem_comp_rdkit_properties.amw 524.106
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 9
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 6
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 19
_pdbe_chem_comp_rdkit_properties.NumHBD 4
_pdbe_chem_comp_rdkit_properties.NumHBA 6
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 36
_pdbe_chem_comp_rdkit_properties.NumAtoms 78
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 10
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 3
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.654
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 3
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 278.442
_pdbe_chem_comp_rdkit_properties.tpsa 141.990
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.365
_pdbe_chem_comp_rdkit_properties.CrippenMR 141.545
_pdbe_chem_comp_rdkit_properties.chi0v 18.003
_pdbe_chem_comp_rdkit_properties.chi1v 9.120
_pdbe_chem_comp_rdkit_properties.chi2v 3.921
_pdbe_chem_comp_rdkit_properties.chi3v 3.921
_pdbe_chem_comp_rdkit_properties.chi4v 2.176
_pdbe_chem_comp_rdkit_properties.chi0n 59.247
_pdbe_chem_comp_rdkit_properties.chi1n 29.386
_pdbe_chem_comp_rdkit_properties.chi2n 3.648
_pdbe_chem_comp_rdkit_properties.chi3n 3.648
_pdbe_chem_comp_rdkit_properties.chi4n 1.997
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.200
_pdbe_chem_comp_rdkit_properties.kappa1 6.165
_pdbe_chem_comp_rdkit_properties.kappa2 11.898
_pdbe_chem_comp_rdkit_properties.kappa3 7.411
_pdbe_chem_comp_rdkit_properties.Phi 2.038
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
R32 UniChem ChEMBL CHEMBL2079493
R32 UniChem PDBe R32
R32 UniChem ZINC ZINC000043178596
R32 UniChem SureChEMBL SCHEMBL290883
R32 UniChem BindingDb 50387268
R32 UniChem PubChem 57519702
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
R32 C1 -7.461 1.877 -0.635 ETKDGv3 1
R32 C2 -6.839 1.441 0.474 ETKDGv3 2
R32 C3 -7.572 1.426 1.767 ETKDGv3 3
R32 C4 -8.845 1.844 1.818 ETKDGv3 4
R32 C5 -9.521 2.320 0.594 ETKDGv3 5
R32 C6 -8.863 2.337 -0.571 ETKDGv3 6
R32 N7 -5.483 0.974 0.402 ETKDGv3 7
R32 CL1 -6.779 0.891 3.241 ETKDGv3 8
R32 C9 -5.254 -0.475 0.330 ETKDGv3 9
R32 C10 -3.799 -0.849 0.698 ETKDGv3 10
R32 N11 -2.907 -0.010 -0.156 ETKDGv3 11
R32 C12 -2.989 1.445 0.073 ETKDGv3 12
R32 C13 -4.418 1.903 0.118 ETKDGv3 13
R32 O14 -4.667 3.131 -0.020 ETKDGv3 14
R32 C15 -3.625 -2.361 0.417 ETKDGv3 15
R32 C16 -3.585 -0.595 2.214 ETKDGv3 16
R32 C17 -1.595 -0.504 -0.647 ETKDGv3 17
R32 C18 -0.500 -0.641 0.442 ETKDGv3 18
R32 C19 0.772 -1.387 -0.069 ETKDGv3 19
R32 C20 1.469 -0.695 -1.267 ETKDGv3 20
R32 C21 2.771 -1.411 -1.722 ETKDGv3 21
R32 C22 3.721 -1.586 -0.556 ETKDGv3 22
R32 N23 4.227 -0.443 0.154 ETKDGv3 23
R32 C24 5.137 -0.554 1.297 ETKDGv3 24
R32 C25 6.341 0.416 1.162 ETKDGv3 25
R32 N26 -0.168 0.665 1.021 ETKDGv3 26
R32 O27 0.435 -2.702 -0.433 ETKDGv3 27
R32 C28 3.487 -0.667 -2.895 ETKDGv3 28
R32 O29 4.068 -2.750 -0.218 ETKDGv3 29
R32 C30 2.558 -0.444 -4.101 ETKDGv3 30
R32 C31 4.735 -1.438 -3.364 ETKDGv3 31
R32 C32 5.858 1.862 1.105 ETKDGv3 32
R32 C33 7.148 0.053 -0.107 ETKDGv3 33
R32 C34 7.265 0.249 2.385 ETKDGv3 34
R32 N35 5.075 2.417 2.165 ETKDGv3 35
R32 O36 6.146 2.594 0.118 ETKDGv3 36
R32 H1 -6.943 1.885 -1.586 ETKDGv3 37
R32 H2 -9.385 1.842 2.756 ETKDGv3 38
R32 H3 -10.548 2.656 0.642 ETKDGv3 39
R32 H4 -9.356 2.686 -1.469 ETKDGv3 40
R32 H5 -5.967 -1.005 1.001 ETKDGv3 41
R32 H6 -5.471 -0.805 -0.710 ETKDGv3 42
R32 H8 -2.477 1.991 -0.749 ETKDGv3 43
R32 H9 -2.497 1.719 1.028 ETKDGv3 44
R32 H10 -3.759 -2.578 -0.664 ETKDGv3 45
R32 H11 -4.381 -2.952 0.979 ETKDGv3 46
R32 H12 -2.625 -2.722 0.734 ETKDGv3 47
R32 H13 -2.553 -0.816 2.537 ETKDGv3 48
R32 H14 -3.811 0.454 2.494 ETKDGv3 49
R32 H15 -4.262 -1.243 2.811 ETKDGv3 50
R32 H16 -1.233 0.182 -1.441 ETKDGv3 51
R32 H17 -1.734 -1.475 -1.164 ETKDGv3 52
R32 H18 -0.896 -1.273 1.255 ETKDGv3 53
R32 H19 1.493 -1.420 0.781 ETKDGv3 54
R32 H20 0.756 -0.697 -2.116 ETKDGv3 55
R32 H21 1.704 0.360 -1.021 ETKDGv3 56
R32 H22 2.483 -2.421 -2.092 ETKDGv3 57
R32 H23 3.854 0.501 -0.088 ETKDGv3 58
R32 H24 5.520 -1.594 1.392 ETKDGv3 59
R32 H25 4.565 -0.342 2.225 ETKDGv3 60
R32 H26 0.608 0.555 1.713 ETKDGv3 61
R32 H27 0.154 1.321 0.274 ETKDGv3 62
R32 H29 0.308 -3.214 0.409 ETKDGv3 63
R32 H30 3.821 0.334 -2.542 ETKDGv3 64
R32 H31 2.070 -1.396 -4.402 ETKDGv3 65
R32 H32 3.130 -0.049 -4.968 ETKDGv3 66
R32 H33 1.780 0.311 -3.865 ETKDGv3 67
R32 H34 5.476 -1.533 -2.544 ETKDGv3 68
R32 H35 5.234 -0.898 -4.196 ETKDGv3 69
R32 H36 4.455 -2.455 -3.714 ETKDGv3 70
R32 H37 6.537 0.203 -1.023 ETKDGv3 71
R32 H38 8.056 0.689 -0.190 ETKDGv3 72
R32 H39 7.472 -1.010 -0.077 ETKDGv3 73
R32 H40 8.118 0.961 2.331 ETKDGv3 74
R32 H41 6.716 0.436 3.332 ETKDGv3 75
R32 H42 7.676 -0.783 2.429 ETKDGv3 76
R32 H43 4.822 1.857 3.008 ETKDGv3 77
R32 H44 4.746 3.406 2.109 ETKDGv3 78
#