data_S09
#
_chem_comp.id S09
_chem_comp.name "(1R,2R)-4-hydroxy-1-[4-(phenylcarbamamido)benzamido]-2,3-dihydro-1H-indene-2-carboxylic acid"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C24 H21 N3 O5"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2022-06-23
_chem_comp.pdbx_modified_date 2022-07-08
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 431.441
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code S09
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5SPB
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
S09 C18 C1 C 0 1 Y N N N N N -49.867 -29.164 6.446 -2.438 1.803 -0.002 C18 S09 1
S09 C16 C2 C 0 1 Y N N N N N -49.968 -29.119 4.064 -0.417 2.775 -0.850 C16 S09 2
S09 C17 C3 C 0 1 Y N N N N N -50.627 -29.078 5.287 -1.751 2.891 -0.530 C17 S09 3
S09 C15 C4 C 0 1 Y N N N N N -48.581 -29.219 4.022 0.247 1.562 -0.644 C15 S09 4
S09 C14 C5 C 0 1 N N N N N N -47.838 -29.277 2.688 1.677 1.435 -0.985 C14 S09 5
S09 C12 C6 C 0 1 N N R N N N -45.684 -29.717 1.463 3.735 0.138 -1.124 C12 S09 6
S09 C11 C7 C 0 1 Y N N N N N -45.512 -28.378 0.724 4.592 0.408 0.094 C11 S09 7
S09 C10 C8 C 0 1 Y N N N N N -46.395 -27.635 -0.061 4.496 1.398 1.057 C10 S09 8
S09 C20 C9 C 0 1 N N N N N N -51.681 -28.611 8.167 -4.618 0.874 0.155 C20 S09 9
S09 C02 C10 C 0 1 N N N N N N -44.118 -31.122 2.845 3.108 -2.282 -0.878 C02 S09 10
S09 C03 C11 C 0 1 N N R N N N -44.264 -30.201 1.638 4.061 -1.314 -1.533 C03 S09 11
S09 C04 C12 C 0 1 N N N N N N -43.430 -28.943 1.789 5.492 -1.499 -0.987 C04 S09 12
S09 C05 C13 C 0 1 Y N N N N N -44.201 -27.926 0.897 5.601 -0.533 0.173 C05 S09 13
S09 C06 C14 C 0 1 Y N N N N N -43.776 -26.734 0.305 6.515 -0.480 1.219 C06 S09 14
S09 C08 C15 C 0 1 Y N N N N N -44.667 -25.998 -0.462 6.414 0.514 2.180 C08 S09 15
S09 C09 C16 C 0 1 Y N N N N N -45.971 -26.447 -0.644 5.403 1.452 2.097 C09 S09 16
S09 C22 C17 C 0 1 Y N N N N N -52.906 -28.216 10.371 -6.728 -0.169 0.499 C22 S09 17
S09 C23 C18 C 0 1 Y N N N N N -53.536 -27.109 9.856 -6.205 -1.436 0.724 C23 S09 18
S09 C24 C19 C 0 1 Y N N N N N -54.569 -26.531 10.551 -7.028 -2.543 0.661 C24 S09 19
S09 C25 C20 C 0 1 Y N N N N N -54.929 -27.050 11.781 -8.372 -2.392 0.373 C25 S09 20
S09 C26 C21 C 0 1 Y N N N N N -54.265 -28.141 12.317 -8.896 -1.133 0.148 C26 S09 21
S09 C27 C22 C 0 1 Y N N N N N -53.224 -28.725 11.618 -8.079 -0.021 0.210 C27 S09 22
S09 C29 C23 C 0 1 Y N N N N N -48.491 -29.248 6.406 -1.779 0.596 0.210 C29 S09 23
S09 C30 C24 C 0 1 Y N N N N N -47.844 -29.290 5.192 -0.445 0.473 -0.108 C30 S09 24
S09 N13 N1 N 0 1 N N N N N N -46.428 -29.618 2.707 2.316 0.265 -0.785 N13 S09 25
S09 N19 N2 N 0 1 N N N N N N -50.381 -29.090 7.786 -3.789 1.923 0.321 N19 S09 26
S09 N21 N3 N 0 1 N N N N N N -51.795 -28.677 9.600 -5.898 0.955 0.568 N21 S09 27
S09 O01 O1 O 0 1 N N N N N N -43.589 -30.693 3.903 2.014 -2.695 -1.537 O01 S09 28
S09 O07 O2 O 0 1 N N N N N N -42.467 -26.264 0.483 7.508 -1.404 1.299 O07 S09 29
S09 O28 O3 O 0 1 N N N N N N -52.535 -28.280 7.417 -4.211 -0.145 -0.368 O28 S09 30
S09 O31 O4 O 0 1 N N N N N N -48.392 -29.055 1.667 2.279 2.385 -1.447 O31 S09 31
S09 O32 O5 O 0 1 N N N N N N -44.525 -32.312 2.778 3.329 -2.684 0.239 O32 S09 32
S09 H161 H1 H 0 0 N N N N N N -50.533 -29.073 3.145 0.116 3.620 -1.260 H161 S09 33
S09 H171 H2 H 0 0 N N N N N N -51.702 -28.982 5.335 -2.264 3.827 -0.690 H171 S09 34
S09 H121 H3 H 0 0 N N N N N N -46.205 -30.412 0.788 3.994 0.825 -1.930 H121 S09 35
S09 H101 H4 H 0 0 N N N N N N -47.406 -27.983 -0.215 3.707 2.134 0.994 H101 S09 36
S09 H031 H5 H 0 0 N N N N N N -43.948 -30.740 0.732 4.042 -1.425 -2.617 H031 S09 37
S09 H042 H6 H 0 0 N N N N N N -42.405 -29.098 1.422 5.635 -2.523 -0.640 H042 S09 38
S09 H041 H7 H 0 0 N N N N N N -43.398 -28.610 2.837 6.225 -1.255 -1.755 H041 S09 39
S09 H081 H8 H 0 0 N N N N N N -44.347 -25.073 -0.919 7.124 0.554 2.993 H081 S09 40
S09 H091 H9 H 0 0 N N N N N N -46.659 -25.868 -1.243 5.323 2.227 2.845 H091 S09 41
S09 H231 H10 H 0 0 N N N N N N -53.220 -26.696 8.909 -5.155 -1.554 0.949 H231 S09 42
S09 H241 H11 H 0 0 N N N N N N -55.094 -25.681 10.142 -6.621 -3.528 0.836 H241 S09 43
S09 H251 H12 H 0 0 N N N N N N -55.740 -26.598 12.332 -9.013 -3.260 0.324 H251 S09 44
S09 H261 H13 H 0 0 N N N N N N -54.559 -28.535 13.279 -9.946 -1.018 -0.077 H261 S09 45
S09 H271 H14 H 0 0 N N N N N N -52.674 -29.556 12.034 -8.489 0.962 0.035 H271 S09 46
S09 H291 H15 H 0 0 N N N N N N -47.923 -29.281 7.324 -2.314 -0.246 0.624 H291 S09 47
S09 H301 H16 H 0 0 N N N N N N -46.768 -29.378 5.152 0.065 -0.466 0.053 H301 S09 48
S09 H131 H17 H 0 0 N N N N N N -45.967 -29.785 3.579 1.835 -0.493 -0.417 H131 S09 49
S09 H191 H18 H 0 0 N N N N N N -49.778 -29.401 8.521 -4.132 2.763 0.666 H191 S09 50
S09 H211 H19 H 0 0 N N N N N N -51.029 -29.081 10.100 -6.245 1.793 0.913 H211 S09 51
S09 H1 H20 H 0 1 N N N N N N -43.571 -31.386 4.552 1.433 -3.316 -1.076 H1 S09 52
S09 H071 H21 H 0 0 N N N N N N -41.983 -26.873 1.028 8.319 -1.150 0.838 H071 S09 53
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
S09 C09 C08 DOUB Y N 1
S09 C09 C10 SING Y N 2
S09 C08 C06 SING Y N 3
S09 C10 C11 DOUB Y N 4
S09 C06 O07 SING N N 5
S09 C06 C05 DOUB Y N 6
S09 C11 C05 SING Y N 7
S09 C11 C12 SING N N 8
S09 C05 C04 SING N N 9
S09 C12 C03 SING N N 10
S09 C12 N13 SING N N 11
S09 C03 C04 SING N N 12
S09 C03 C02 SING N N 13
S09 O31 C14 DOUB N N 14
S09 C14 N13 SING N N 15
S09 C14 C15 SING N N 16
S09 O32 C02 DOUB N N 17
S09 C02 O01 SING N N 18
S09 C15 C16 DOUB Y N 19
S09 C15 C30 SING Y N 20
S09 C16 C17 SING Y N 21
S09 C30 C29 DOUB Y N 22
S09 C17 C18 DOUB Y N 23
S09 C29 C18 SING Y N 24
S09 C18 N19 SING N N 25
S09 O28 C20 DOUB N N 26
S09 N19 C20 SING N N 27
S09 C20 N21 SING N N 28
S09 N21 C22 SING N N 29
S09 C23 C22 DOUB Y N 30
S09 C23 C24 SING Y N 31
S09 C22 C27 SING Y N 32
S09 C24 C25 DOUB Y N 33
S09 C27 C26 DOUB Y N 34
S09 C25 C26 SING Y N 35
S09 C16 H161 SING N N 36
S09 C17 H171 SING N N 37
S09 C12 H121 SING N N 38
S09 C10 H101 SING N N 39
S09 C03 H031 SING N N 40
S09 C04 H042 SING N N 41
S09 C04 H041 SING N N 42
S09 C08 H081 SING N N 43
S09 C09 H091 SING N N 44
S09 C23 H231 SING N N 45
S09 C24 H241 SING N N 46
S09 C25 H251 SING N N 47
S09 C26 H261 SING N N 48
S09 C27 H271 SING N N 49
S09 C29 H291 SING N N 50
S09 C30 H301 SING N N 51
S09 N13 H131 SING N N 52
S09 N19 H191 SING N N 53
S09 N21 H211 SING N N 54
S09 O01 H1 SING N N 55
S09 O07 H071 SING N N 56
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
S09 SMILES ACDLabs 12.01 O=C(Nc1ccccc1)Nc1ccc(cc1)C(=O)NC1c2cccc(O)c2CC1C(=O)O
S09 InChI InChI 1.06 InChI=1S/C24H21N3O5/c28-20-8-4-7-17-18(20)13-19(23(30)31)21(17)27-22(29)14-9-11-16(12-10-14)26-24(32)25-15-5-2-1-3-6-15/h1-12,19,21,28H,13H2,(H,27,29)(H,30,31)(H2,25,26,32)/t19-,21+/m1/s1
S09 InChIKey InChI 1.06 UCQXDGPOPJQAQB-CTNGQTDRSA-N
S09 SMILES_CANONICAL CACTVS 3.385 OC(=O)[C@@H]1Cc2c(O)cccc2[C@@H]1NC(=O)c3ccc(NC(=O)Nc4ccccc4)cc3
S09 SMILES CACTVS 3.385 OC(=O)[CH]1Cc2c(O)cccc2[CH]1NC(=O)c3ccc(NC(=O)Nc4ccccc4)cc3
S09 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 c1ccc(cc1)NC(=O)Nc2ccc(cc2)C(=O)N[C@H]3c4cccc(c4C[C@H]3C(=O)O)O
S09 SMILES "OpenEye OEToolkits" 2.0.7 c1ccc(cc1)NC(=O)Nc2ccc(cc2)C(=O)NC3c4cccc(c4CC3C(=O)O)O
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
S09 "SYSTEMATIC NAME" ACDLabs 12.01 "(1R,2R)-4-hydroxy-1-[4-(phenylcarbamamido)benzamido]-2,3-dihydro-1H-indene-2-carboxylic acid"
S09 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{R},2~{R})-4-oxidanyl-1-[[4-(phenylcarbamoylamino)phenyl]carbonylamino]-2,3-dihydro-1~{H}-indene-2-carboxylic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
S09 'Create component' 2022-06-23 RCSB
S09 'Initial release' 2022-07-13 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
S09 C18 C 7.880 1.933 1
S09 C16 C 8.415 -0.610 2
S09 C17 C 8.881 0.816 3
S09 C15 C 6.948 -0.919 4
S09 C14 C 6.482 -2.345 5
S09 C12 C 7.018 -4.887 6
S09 C11 C 5.598 -5.344 7
S09 C10 C 4.299 -4.594 8
S09 C20 C 7.344 4.475 9
S09 C02 C 9.393 -6.094 10
S09 C03 C 7.893 -6.094 11
S09 C04 C 7.018 -7.301 12
S09 C05 C 5.598 -6.844 13
S09 C06 C 4.299 -7.594 14
S09 C08 C 3.000 -6.844 15
S09 C09 C 3.000 -5.344 16
S09 C22 C 6.808 7.017 17
S09 C23 C 5.340 6.708 18
S09 C24 C 4.339 7.824 19
S09 C25 C 4.804 9.250 20
S09 C26 C 6.272 9.559 21
S09 C27 C 7.274 8.443 22
S09 C29 C 6.412 1.623 23
S09 C30 C 5.946 0.197 24
S09 N13 N 7.483 -3.461 25
S09 N19 N 8.345 3.358 26
S09 N21 N 7.810 5.901 27
S09 O01 O 10.143 -7.393 28
S09 O07 O 4.299 -9.094 29
S09 O28 O 5.876 4.165 30
S09 O31 O 5.014 -2.654 31
S09 O32 O 10.143 -4.795 32
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
S09 C09 C08 SINGLE NONE 1
S09 C09 C10 DOUBLE NONE 2
S09 C08 C06 DOUBLE NONE 3
S09 C10 C11 SINGLE NONE 4
S09 C06 O07 SINGLE NONE 5
S09 C06 C05 SINGLE NONE 6
S09 C11 C05 DOUBLE NONE 7
S09 C11 C12 SINGLE NONE 8
S09 C05 C04 SINGLE NONE 9
S09 C12 C03 SINGLE NONE 10
S09 C12 N13 SINGLE BEGINDASH 11
S09 C03 C04 SINGLE NONE 12
S09 C03 C02 SINGLE BEGINDASH 13
S09 O31 C14 DOUBLE NONE 14
S09 C14 N13 SINGLE NONE 15
S09 C14 C15 SINGLE NONE 16
S09 O32 C02 DOUBLE NONE 17
S09 C02 O01 SINGLE NONE 18
S09 C15 C16 DOUBLE NONE 19
S09 C15 C30 SINGLE NONE 20
S09 C16 C17 SINGLE NONE 21
S09 C30 C29 DOUBLE NONE 22
S09 C17 C18 DOUBLE NONE 23
S09 C29 C18 SINGLE NONE 24
S09 C18 N19 SINGLE NONE 25
S09 O28 C20 DOUBLE NONE 26
S09 N19 C20 SINGLE NONE 27
S09 C20 N21 SINGLE NONE 28
S09 N21 C22 SINGLE NONE 29
S09 C23 C22 DOUBLE NONE 30
S09 C23 C24 SINGLE NONE 31
S09 C22 C27 SINGLE NONE 32
S09 C24 C25 DOUBLE NONE 33
S09 C27 C26 DOUBLE NONE 34
S09 C25 C26 SINGLE NONE 35
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
S09 MurckoScaffold S1 scaffold 'O=C(Nc1ccccc1)Nc1ccc(C(=O)N[C@@H]2CCc3ccccc32)cc1' InChI=1S/C23H21N3O2/c27-22(26-21-15-12-16-6-4-5-9-20(16)21)17-10-13-19(14-11-17)25-23(28)24-18-7-2-1-3-8-18/h1-11,13-14,21H,12,15H2,(H,26,27)(H2,24,25,28)/t21-/m1/s1 OYYNRXRRZLFQCT-OAQYLSRUSA-N
S09 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
S09 phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
S09 Z382816560 F3 fragment NC(CCO)c1ccccc1 InChI=1S/C9H13NO/c10-9(6-7-11)8-4-2-1-3-5-8/h1-5,9,11H,6-7,10H2 SEQXIQNPMQTBGN-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
S09 C18 S1 1
S09 C16 S1 1
S09 C17 S1 1
S09 C15 S1 1
S09 C14 S1 1
S09 C12 S1 1
S09 C11 S1 1
S09 C10 S1 1
S09 C20 S1 1
S09 C03 S1 1
S09 C04 S1 1
S09 C05 S1 1
S09 C06 S1 1
S09 C08 S1 1
S09 C09 S1 1
S09 C22 S1 1
S09 C23 S1 1
S09 C24 S1 1
S09 C25 S1 1
S09 C26 S1 1
S09 C27 S1 1
S09 C29 S1 1
S09 C30 S1 1
S09 N13 S1 1
S09 N19 S1 1
S09 N21 S1 1
S09 O28 S1 1
S09 O31 S1 1
S09 N13 F1 1
S09 C14 F1 1
S09 O31 F1 1
S09 C15 F1 1
S09 C18 F2 1
S09 C17 F2 1
S09 C16 F2 1
S09 C15 F2 1
S09 C30 F2 1
S09 C29 F2 1
S09 C11 F2 2
S09 C10 F2 2
S09 C09 F2 2
S09 C08 F2 2
S09 C06 F2 2
S09 C05 F2 2
S09 C22 F2 3
S09 C23 F2 3
S09 C24 F2 3
S09 C25 F2 3
S09 C26 F2 3
S09 C27 F2 3
S09 N13 F3 1
S09 C12 F3 1
S09 C03 F3 1
S09 C02 F3 1
S09 O01 F3 1
S09 C11 F3 1
S09 C10 F3 1
S09 C09 F3 1
S09 C08 F3 1
S09 C06 F3 1
S09 C05 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id S09
_pdbe_chem_comp_rdkit_properties.exactmw 431.148
_pdbe_chem_comp_rdkit_properties.amw 431.448
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 8
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 5
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 6
_pdbe_chem_comp_rdkit_properties.NumHBD 5
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 32
_pdbe_chem_comp_rdkit_properties.NumAtoms 53
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 8
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 3
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.125
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 2
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 213.304
_pdbe_chem_comp_rdkit_properties.tpsa 127.760
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.376
_pdbe_chem_comp_rdkit_properties.CrippenMR 115.613
_pdbe_chem_comp_rdkit_properties.chi0v 15.383
_pdbe_chem_comp_rdkit_properties.chi1v 8.362
_pdbe_chem_comp_rdkit_properties.chi2v 3.709
_pdbe_chem_comp_rdkit_properties.chi3v 3.709
_pdbe_chem_comp_rdkit_properties.chi4v 2.396
_pdbe_chem_comp_rdkit_properties.chi0n 36.383
_pdbe_chem_comp_rdkit_properties.chi1n 18.520
_pdbe_chem_comp_rdkit_properties.chi2n 3.709
_pdbe_chem_comp_rdkit_properties.chi3n 3.709
_pdbe_chem_comp_rdkit_properties.chi4n 2.396
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -4.330
_pdbe_chem_comp_rdkit_properties.kappa1 7.372
_pdbe_chem_comp_rdkit_properties.kappa2 8.807
_pdbe_chem_comp_rdkit_properties.kappa3 4.388
_pdbe_chem_comp_rdkit_properties.Phi 2.029
#
_pdbe_chem_comp_external_mappings.comp_id S09
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PDBe
_pdbe_chem_comp_external_mappings.resource_id S09
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
S09 C18 2.159 -0.676 0.334 ETKDGv3 1
S09 C16 -0.271 -0.441 0.552 ETKDGv3 2
S09 C17 1.045 -0.890 1.052 ETKDGv3 3
S09 C15 -0.377 0.161 -0.647 ETKDGv3 4
S09 C14 -1.682 0.638 -1.162 ETKDGv3 5
S09 C12 -4.213 0.680 -1.006 ETKDGv3 6
S09 C11 -5.346 -0.240 -0.721 ETKDGv3 7
S09 C10 -5.509 -1.612 -1.245 ETKDGv3 8
S09 C20 4.678 -0.485 0.558 ETKDGv3 9
S09 C02 -3.578 2.040 1.075 ETKDGv3 10
S09 C03 -4.513 1.911 -0.104 ETKDGv3 11
S09 C04 -5.974 1.730 0.368 ETKDGv3 12
S09 C05 -6.293 0.325 0.007 ETKDGv3 13
S09 C06 -7.541 -0.409 0.331 ETKDGv3 14
S09 C08 -7.690 -1.663 -0.127 ETKDGv3 15
S09 C09 -6.628 -2.291 -0.954 ETKDGv3 16
S09 C22 7.212 -0.685 0.516 ETKDGv3 17
S09 C23 7.429 -0.114 -0.686 ETKDGv3 18
S09 C24 8.791 0.312 -1.073 ETKDGv3 19
S09 C25 9.819 0.114 -0.240 ETKDGv3 20
S09 C26 9.595 -0.536 1.067 ETKDGv3 21
S09 C27 8.362 -0.918 1.423 ETKDGv3 22
S09 C29 2.044 -0.024 -0.996 ETKDGv3 23
S09 C30 0.851 0.376 -1.453 ETKDGv3 24
S09 N13 -2.917 0.050 -0.722 ETKDGv3 25
S09 N19 3.427 -1.131 0.836 ETKDGv3 26
S09 N21 5.906 -1.140 0.911 ETKDGv3 27
S09 O01 -2.685 3.106 1.133 ETKDGv3 28
S09 O07 -8.551 0.176 1.092 ETKDGv3 29
S09 O28 4.696 0.680 0.074 ETKDGv3 30
S09 O31 -1.704 1.573 -2.008 ETKDGv3 31
S09 O32 -3.581 1.175 1.992 ETKDGv3 32
S09 H161 -1.134 -0.583 1.190 ETKDGv3 33
S09 H171 1.101 -1.377 2.018 ETKDGv3 34
S09 H121 -4.268 0.966 -2.080 ETKDGv3 35
S09 H101 -4.737 -2.062 -1.856 ETKDGv3 36
S09 H031 -4.437 2.838 -0.714 ETKDGv3 37
S09 H042 -6.104 1.895 1.460 ETKDGv3 38
S09 H041 -6.649 2.414 -0.191 ETKDGv3 39
S09 H081 -8.591 -2.220 0.096 ETKDGv3 40
S09 H091 -6.764 -3.298 -1.327 ETKDGv3 41
S09 H231 6.625 0.015 -1.397 ETKDGv3 42
S09 H241 8.954 0.780 -2.035 ETKDGv3 43
S09 H251 10.816 0.423 -0.524 ETKDGv3 44
S09 H261 10.430 -0.703 1.735 ETKDGv3 45
S09 H271 8.205 -1.395 2.383 ETKDGv3 46
S09 H291 2.917 0.107 -1.621 ETKDGv3 47
S09 H301 0.787 0.839 -2.430 ETKDGv3 48
S09 H131 -2.896 -0.859 -0.207 ETKDGv3 49
S09 H191 3.437 -1.944 1.493 ETKDGv3 50
S09 H211 5.853 -1.949 1.570 ETKDGv3 51
S09 H1 -2.038 3.199 1.907 ETKDGv3 52
S09 H071 -8.471 1.122 1.445 ETKDGv3 53
#