data_SBT
#
_chem_comp.id SBT
_chem_comp.name 2-BUTANOL
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C4 H10 O"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 74.122
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code SBT
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1BXZ
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
SBT C1 C1 C 0 1 N N N N N N -20.531 -24.349 27.669 0.715 0.018 -1.757 C1 SBT 1
SBT C2 C2 C 0 1 N N S N N N -21.173 -24.978 26.400 0.011 -0.366 -0.454 C2 SBT 2
SBT C3 C3 C 0 1 N N N N N N -20.158 -25.991 25.707 0.737 0.278 0.727 C3 SBT 3
SBT C4 C4 C 0 1 N N N N N N -20.769 -26.516 24.393 0.033 -0.106 2.030 C4 SBT 4
SBT OH OH O 0 1 N N N N N N -22.442 -25.630 26.784 -1.341 0.092 -0.490 OH SBT 5
SBT H11 1H1 H 0 1 N N N N N N -21.241 -23.639 28.154 1.746 -0.331 -1.729 H11 SBT 6
SBT H12 2H1 H 0 1 N N N N N N -20.170 -25.127 28.381 0.197 -0.441 -2.599 H12 SBT 7
SBT H13 3H1 H 0 1 N N N N N N -19.552 -23.865 27.442 0.701 1.102 -1.870 H13 SBT 8
SBT H2 H2 H 0 1 N N N N N N -21.397 -24.187 25.646 0.024 -1.450 -0.340 H2 SBT 9
SBT H31 1H3 H 0 1 N N N N N N -19.151 -25.537 25.551 0.724 1.362 0.614 H31 SBT 10
SBT H32 2H3 H 0 1 N N N N N N -19.856 -26.818 26.390 1.769 -0.071 0.755 H32 SBT 11
SBT H41 1H4 H 0 1 N N N N N N -20.058 -27.225 23.907 0.551 0.353 2.872 H41 SBT 12
SBT H42 2H4 H 0 1 N N N N N N -21.775 -26.969 24.548 -0.998 0.243 2.003 H42 SBT 13
SBT H43 3H4 H 0 1 N N N N N N -21.070 -25.688 23.709 0.046 -1.190 2.144 H43 SBT 14
SBT HO HO H 0 1 N N N N N N -22.834 -26.014 26.008 -1.308 1.053 -0.591 HO SBT 15
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
SBT C1 C2 SING N N 1
SBT C1 H11 SING N N 2
SBT C1 H12 SING N N 3
SBT C1 H13 SING N N 4
SBT C2 C3 SING N N 5
SBT C2 OH SING N N 6
SBT C2 H2 SING N N 7
SBT C3 C4 SING N N 8
SBT C3 H31 SING N N 9
SBT C3 H32 SING N N 10
SBT C4 H41 SING N N 11
SBT C4 H42 SING N N 12
SBT C4 H43 SING N N 13
SBT OH HO SING N N 14
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
SBT SMILES ACDLabs 10.04 OC(C)CC
SBT SMILES_CANONICAL CACTVS 3.341 CC[C@H](C)O
SBT SMILES CACTVS 3.341 CC[CH](C)O
SBT SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 CC[C@H](C)O
SBT SMILES "OpenEye OEToolkits" 1.5.0 CCC(C)O
SBT InChI InChI 1.03 InChI=1S/C4H10O/c1-3-4(2)5/h4-5H,3H2,1-2H3/t4-/m0/s1
SBT InChIKey InChI 1.03 BTANRVKWQNVYAZ-BYPYZUCNSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
SBT "SYSTEMATIC NAME" ACDLabs 10.04 (2S)-butan-2-ol
SBT "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 (2S)-butan-2-ol
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
SBT 'Create component' 1999-07-08 RCSB
SBT 'Modify descriptor' 2011-06-04 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
SBT C1 C 3.805 1.125 1
SBT C2 C 5.104 0.375 2
SBT C3 C 6.404 1.125 3
SBT C4 C 7.702 0.375 4
SBT OH O 5.104 -1.125 5
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
SBT C2 C1 SINGLE BEGINWEDGE 1
SBT C2 C3 SINGLE NONE 2
SBT C2 OH SINGLE NONE 3
SBT C3 C4 SINGLE NONE 4
#
#
#
_pdbe_chem_comp_rdkit_properties.comp_id SBT
_pdbe_chem_comp_rdkit_properties.exactmw 74.073
_pdbe_chem_comp_rdkit_properties.amw 74.123
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 1
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 4
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 1
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 5
_pdbe_chem_comp_rdkit_properties.NumAtoms 15
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 1
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 1
_pdbe_chem_comp_rdkit_properties.NumRings 0
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 46.765
_pdbe_chem_comp_rdkit_properties.tpsa 20.230
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.777
_pdbe_chem_comp_rdkit_properties.CrippenMR 21.972
_pdbe_chem_comp_rdkit_properties.chi0v 2.408
_pdbe_chem_comp_rdkit_properties.chi1v 0.954
_pdbe_chem_comp_rdkit_properties.chi2v 0.114
_pdbe_chem_comp_rdkit_properties.chi3v 0.114
_pdbe_chem_comp_rdkit_properties.chi4v 0
_pdbe_chem_comp_rdkit_properties.chi0n 12.408
_pdbe_chem_comp_rdkit_properties.chi1n 5.862
_pdbe_chem_comp_rdkit_properties.chi2n 0.114
_pdbe_chem_comp_rdkit_properties.chi3n 0.114
_pdbe_chem_comp_rdkit_properties.chi4n 0
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -0.040
_pdbe_chem_comp_rdkit_properties.kappa1 0.399
_pdbe_chem_comp_rdkit_properties.kappa2 2.213
_pdbe_chem_comp_rdkit_properties.kappa3 3.960
_pdbe_chem_comp_rdkit_properties.Phi 0.177
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
SBT UniChem PDBe SBT
SBT UniChem ChEBI 45475
SBT UniChem ZINC ZINC000001850884
SBT UniChem fdasrs 69KXU5NDTO
SBT UniChem BRENDA 107716
SBT UniChem BRENDA 145257
SBT UniChem BRENDA 1990
SBT UniChem BRENDA 215938
SBT UniChem BRENDA 218158
SBT UniChem BRENDA 259982
SBT UniChem ChemicalBook CB4287256
SBT UniChem Nikkaji J9.275D
SBT UniChem eMolecules 486895
SBT UniChem SureChEMBL SCHEMBL55899
SBT UniChem 'PubChem TPHARMA' 16201455
SBT UniChem PubChem 444683
SBT UniChem Mcule MCULE-6063716138
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
SBT C1 1.860 -0.345 -0.305 ETKDGv3 1
SBT C2 0.498 0.353 -0.346 ETKDGv3 2
SBT C3 -0.627 -0.647 -0.035 ETKDGv3 3
SBT C4 -2.007 -0.008 -0.177 ETKDGv3 4
SBT OH 0.476 1.395 0.596 ETKDGv3 5
SBT H11 2.051 -0.766 0.706 ETKDGv3 6
SBT H12 2.665 0.382 -0.546 ETKDGv3 7
SBT H13 1.896 -1.166 -1.053 ETKDGv3 8
SBT H2 0.341 0.760 -1.372 ETKDGv3 9
SBT H31 -0.565 -1.507 -0.736 ETKDGv3 10
SBT H32 -0.512 -1.035 1.001 ETKDGv3 11
SBT H41 -2.151 0.376 -1.210 ETKDGv3 12
SBT H42 -2.790 -0.767 0.030 ETKDGv3 13
SBT H43 -2.126 0.827 0.545 ETKDGv3 14
SBT HO 0.991 2.147 0.204 ETKDGv3 15
#