data_T3A
#
_chem_comp.id T3A
_chem_comp.name "N-(TRIS(HYDROXYMETHYL)METHYL)-3-AMINOPROPANESULFONIC ACID"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C7 H17 N O6 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2005-05-11
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 243.278
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code T3A
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1ZDY
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
T3A S1 S1 S 0 1 N N N N N N 12.354 29.222 0.920 -3.718 0.009 0.120 S1 T3A 1
T3A O1 O1 O 0 1 N N N N N N 11.101 28.330 0.592 -3.984 1.251 0.756 O1 T3A 2
T3A O2 O2 O 0 1 N N N N N N 12.758 30.052 -0.234 -3.988 -1.235 0.751 O2 T3A 3
T3A O3 O3 O 0 1 N N N N N N 12.022 29.979 2.151 -4.691 0.013 -1.050 O3 T3A 4
T3A C1 C1 C 0 1 N N N N N N 13.587 27.843 1.274 -2.096 0.008 -0.693 C1 T3A 5
T3A C2 C2 C 0 1 N N N N N N 14.439 28.053 2.491 -0.994 0.004 0.369 C2 T3A 6
T3A C3 C3 C 0 1 N N N N N N 14.138 27.186 3.708 0.374 0.004 -0.317 C3 T3A 7
T3A N1 N1 N 0 1 N N N N N N 15.290 26.694 4.436 1.432 0.000 0.702 N1 T3A 8
T3A C4 C4 C 0 1 N N N N N N 15.673 26.447 5.833 2.713 -0.001 -0.018 C4 T3A 9
T3A C5 C5 C 0 1 N N N N N N 15.539 27.693 6.487 3.865 -0.004 0.988 C5 T3A 10
T3A O5 O5 O 0 1 N N N N N N 14.777 28.235 7.448 5.110 -0.005 0.287 O5 T3A 11
T3A C6 C6 C 0 1 N N N N N N 16.983 26.011 5.734 2.805 1.250 -0.894 C6 T3A 12
T3A O6 O6 O 0 1 N N N N N N 18.154 26.476 5.274 2.722 2.416 -0.071 O6 T3A 13
T3A C7 C7 C 0 1 N N N N N N 14.782 25.444 6.263 2.801 -1.248 -0.900 C7 T3A 14
T3A O7 O7 O 0 1 N N N N N N 13.467 25.277 6.529 2.598 -2.413 -0.098 O7 T3A 15
T3A HO3 HO3 H 0 1 N N N N N N 12.778 30.517 2.349 -5.582 0.013 -0.672 HO3 T3A 16
T3A H11 1H1 H 0 1 N N N N N N 13.060 26.862 1.336 -2.000 0.899 -1.313 H11 T3A 17
T3A H12 2H1 H 0 1 N N N N N N 14.229 27.661 0.380 -2.002 -0.881 -1.317 H12 T3A 18
T3A H21 1H2 H 0 1 N N N N N N 15.513 27.944 2.214 -1.090 -0.887 0.989 H21 T3A 19
T3A H22 2H2 H 0 1 N N N N N N 14.408 29.128 2.784 -1.087 0.893 0.993 H22 T3A 20
T3A H31 1H3 H 0 1 N N N N N N 13.455 27.730 4.401 0.470 0.895 -0.937 H31 T3A 21
T3A H32 2H3 H 0 1 N N N N N N 13.483 26.332 3.412 0.468 -0.885 -0.941 H32 T3A 22
T3A HN1 HN1 H 0 1 N N N N N N 16.037 27.304 4.106 1.370 -0.885 1.182 HN1 T3A 23
T3A H51 1H5 H 0 1 N N N N N N 16.572 27.881 6.862 3.799 -0.896 1.613 H51 T3A 24
T3A H52 2H5 H 0 1 N N N N N N 15.393 28.398 5.636 3.801 0.884 1.616 H52 T3A 25
T3A HO5 HO5 H 0 1 N N N N N N 14.686 29.072 7.887 5.808 -0.007 0.957 HO5 T3A 26
T3A H61 1H6 H 0 1 N N N N N N 17.227 25.738 6.787 3.755 1.250 -1.429 H61 T3A 27
T3A H62 2H6 H 0 1 N N N N N N 16.875 25.044 5.189 1.984 1.253 -1.612 H62 T3A 28
T3A HO6 HO6 H 0 1 N N N N N N 19.053 26.176 5.206 2.784 3.179 -0.661 HO6 T3A 29
T3A H71 1H7 H 0 1 N N N N N N 14.972 24.632 5.522 2.035 -1.202 -1.673 H71 T3A 30
T3A H72 2H7 H 0 1 N N N N N N 15.254 25.108 7.215 3.785 -1.295 -1.366 H72 T3A 31
T3A HO7 HO7 H 0 1 N N N N N N 12.866 24.600 6.819 2.662 -3.175 -0.690 HO7 T3A 32
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
T3A S1 O1 DOUB N N 1
T3A S1 O2 DOUB N N 2
T3A S1 O3 SING N N 3
T3A S1 C1 SING N N 4
T3A O3 HO3 SING N N 5
T3A C1 C2 SING N N 6
T3A C1 H11 SING N N 7
T3A C1 H12 SING N N 8
T3A C2 C3 SING N N 9
T3A C2 H21 SING N N 10
T3A C2 H22 SING N N 11
T3A C3 N1 SING N N 12
T3A C3 H31 SING N N 13
T3A C3 H32 SING N N 14
T3A N1 C4 SING N N 15
T3A N1 HN1 SING N N 16
T3A C4 C5 SING N N 17
T3A C4 C6 SING N N 18
T3A C4 C7 SING N N 19
T3A C5 O5 SING N N 20
T3A C5 H51 SING N N 21
T3A C5 H52 SING N N 22
T3A O5 HO5 SING N N 23
T3A C6 O6 SING N N 24
T3A C6 H61 SING N N 25
T3A C6 H62 SING N N 26
T3A O6 HO6 SING N N 27
T3A C7 O7 SING N N 28
T3A C7 H71 SING N N 29
T3A C7 H72 SING N N 30
T3A O7 HO7 SING N N 31
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
T3A SMILES ACDLabs 10.04 O=S(=O)(O)CCCNC(CO)(CO)CO
T3A SMILES_CANONICAL CACTVS 3.341 OCC(CO)(CO)NCCC[S](O)(=O)=O
T3A SMILES CACTVS 3.341 OCC(CO)(CO)NCCC[S](O)(=O)=O
T3A SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 C(CNC(CO)(CO)CO)CS(=O)(=O)O
T3A SMILES "OpenEye OEToolkits" 1.5.0 C(CNC(CO)(CO)CO)CS(=O)(=O)O
T3A InChI InChI 1.03 InChI=1S/C7H17NO6S/c9-4-7(5-10,6-11)8-2-1-3-15(12,13)14/h8-11H,1-6H2,(H,12,13,14)
T3A InChIKey InChI 1.03 YNLCVAQJIKOXER-UHFFFAOYSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
T3A "SYSTEMATIC NAME" ACDLabs 10.04 "3-{[2-hydroxy-1,1-bis(hydroxymethyl)ethyl]amino}propane-1-sulfonic acid"
T3A "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "3-[[1,3-dihydroxy-2-(hydroxymethyl)propan-2-yl]amino]propane-1-sulfonic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
T3A 'Create component' 2005-05-11 RCSB
T3A 'Modify descriptor' 2011-06-04 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
T3A S1 S 12.899 0.750 1
T3A O1 O 14.198 1.500 2
T3A O2 O 13.649 -0.549 3
T3A O3 O 12.149 2.049 4
T3A C1 C 11.600 0.000 5
T3A C2 C 10.301 0.750 6
T3A C3 C 9.002 0.000 7
T3A N1 N 7.702 0.750 8
T3A C4 C 6.404 0.000 9
T3A C5 C 5.104 -0.750 10
T3A O5 O 3.805 0.000 11
T3A C6 C 5.654 1.299 12
T3A O6 O 6.404 2.598 13
T3A C7 C 7.154 -1.299 14
T3A O7 O 6.404 -2.598 15
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
T3A S1 O1 DOUBLE NONE 1
T3A S1 O2 DOUBLE NONE 2
T3A S1 O3 SINGLE NONE 3
T3A S1 C1 SINGLE NONE 4
T3A C1 C2 SINGLE NONE 5
T3A C2 C3 SINGLE NONE 6
T3A C3 N1 SINGLE NONE 7
T3A N1 C4 SINGLE NONE 8
T3A C4 C5 SINGLE NONE 9
T3A C4 C6 SINGLE NONE 10
T3A C4 C7 SINGLE NONE 11
T3A C5 O5 SINGLE NONE 12
T3A C6 O6 SINGLE NONE 13
T3A C7 O7 SINGLE NONE 14
#
#
#
_pdbe_chem_comp_rdkit_properties.comp_id T3A
_pdbe_chem_comp_rdkit_properties.exactmw 243.078
_pdbe_chem_comp_rdkit_properties.amw 243.281
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 7
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 5
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 12
_pdbe_chem_comp_rdkit_properties.NumHBD 5
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 15
_pdbe_chem_comp_rdkit_properties.NumAtoms 32
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 8
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 1
_pdbe_chem_comp_rdkit_properties.NumRings 0
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 112.779
_pdbe_chem_comp_rdkit_properties.tpsa 127.090
_pdbe_chem_comp_rdkit_properties.CrippenClogP -2.430
_pdbe_chem_comp_rdkit_properties.CrippenMR 53.024
_pdbe_chem_comp_rdkit_properties.chi0v 7.621
_pdbe_chem_comp_rdkit_properties.chi1v 4.422
_pdbe_chem_comp_rdkit_properties.chi2v 1.251
_pdbe_chem_comp_rdkit_properties.chi3v 1.251
_pdbe_chem_comp_rdkit_properties.chi4v 0.499
_pdbe_chem_comp_rdkit_properties.chi0n 23.805
_pdbe_chem_comp_rdkit_properties.chi1n 11.094
_pdbe_chem_comp_rdkit_properties.chi2n 0.899
_pdbe_chem_comp_rdkit_properties.chi3n 0.899
_pdbe_chem_comp_rdkit_properties.chi4n 0.328
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -0.250
_pdbe_chem_comp_rdkit_properties.kappa1 2.949
_pdbe_chem_comp_rdkit_properties.kappa2 6.358
_pdbe_chem_comp_rdkit_properties.kappa3 6.025
_pdbe_chem_comp_rdkit_properties.Phi 1.250
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
T3A UniChem PDBe T3A
T3A UniChem ChEBI 191055
T3A UniChem ZINC ZINC000001611594
T3A UniChem fdasrs Y5DC3IN066
T3A UniChem HMDB HMDB0258723
T3A UniChem NMRShiftDB 20200724
T3A UniChem ChemicalBook CB2433242
T3A UniChem 'Probes And Drugs' PD094094
T3A UniChem 'EPA CompTox Dashboard' DTXSID3067528
T3A UniChem eMolecules 532627
T3A UniChem SureChEMBL SCHEMBL97942
T3A UniChem 'PubChem TPHARMA' 14847524
T3A UniChem PubChem 121591
T3A UniChem PubChem 6993217
T3A UniChem Mcule MCULE-3848542536
T3A UniChem ACTor 29915-38-6
T3A UniChem Nikkaji J208.999H
T3A UniChem BindingDb 82506
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
T3A S1 4.656 0.063 -1.116 ETKDGv3 1
T3A O1 5.673 -0.992 -1.450 ETKDGv3 2
T3A O2 4.676 1.122 -2.182 ETKDGv3 3
T3A O3 5.039 0.761 0.365 ETKDGv3 4
T3A C1 3.033 -0.677 -1.041 ETKDGv3 5
T3A C2 1.979 0.365 -0.658 ETKDGv3 6
T3A C3 0.582 -0.262 -0.586 ETKDGv3 7
T3A N1 -0.422 0.771 -0.273 ETKDGv3 8
T3A C4 -1.818 0.299 -0.063 ETKDGv3 9
T3A C5 -2.302 -0.590 -1.250 ETKDGv3 10
T3A O5 -1.771 -1.886 -1.170 ETKDGv3 11
T3A C6 -1.943 -0.452 1.300 ETKDGv3 12
T3A O6 -3.264 -0.853 1.557 ETKDGv3 13
T3A C7 -2.695 1.582 -0.026 ETKDGv3 14
T3A O7 -4.056 1.283 0.132 ETKDGv3 15
T3A HO3 4.979 0.020 1.019 ETKDGv3 16
T3A H11 3.048 -1.493 -0.288 ETKDGv3 17
T3A H12 2.793 -1.112 -2.035 ETKDGv3 18
T3A H21 1.973 1.181 -1.414 ETKDGv3 19
T3A H22 2.238 0.801 0.331 ETKDGv3 20
T3A H31 0.365 -0.706 -1.580 ETKDGv3 21
T3A H32 0.589 -1.060 0.184 ETKDGv3 22
T3A HN1 -0.110 1.287 0.585 ETKDGv3 23
T3A H51 -3.412 -0.670 -1.249 ETKDGv3 24
T3A H52 -2.002 -0.117 -2.213 ETKDGv3 25
T3A HO5 -2.088 -2.366 -1.979 ETKDGv3 26
T3A H61 -1.622 0.221 2.123 ETKDGv3 27
T3A H62 -1.272 -1.337 1.341 ETKDGv3 28
T3A HO6 -3.395 -1.728 1.107 ETKDGv3 29
T3A H71 -2.365 2.237 0.813 ETKDGv3 30
T3A H72 -2.553 2.150 -0.973 ETKDGv3 31
T3A HO7 -4.532 2.155 0.141 ETKDGv3 32
#