data_T9H
#
_chem_comp.id T9H
_chem_comp.name
2-fluoranyl-N-[(2R)-3-(1H-indol-3-yl)-1-oxidanylidene-1-(pyridin-4-ylamino)propan-2-yl]-4-(4-thiophen-2-ylsulfonylpiperazin-1-yl)benzamide
_chem_comp.type non-polymer
_chem_comp.pdbx_type ?
_chem_comp.formula "C31 H29 F N6 O4 S2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2012-10-08
_chem_comp.pdbx_modified_date 2014-09-05
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 632.728
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code T9H
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 2YMC
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
T9H O4 O4 O 0 1 N N N N N N -34.248 -18.174 -21.901 4.496 -2.276 -0.521 O4 T9H 1
T9H C6 C6 C 0 1 N N N N N N -33.896 -17.479 -20.927 5.201 -1.299 -0.376 C6 T9H 2
T9H N2 N2 N 0 1 N N N N N N -32.612 -17.183 -20.690 6.541 -1.436 -0.337 N2 T9H 3
T9H C5 C5 C 0 1 Y N N N N N -31.496 -17.816 -21.183 7.113 -2.709 -0.353 C5 T9H 4
T9H C4 C4 C 0 1 Y N N N N N -30.359 -17.842 -20.394 8.348 -2.930 -0.962 C4 T9H 5
T9H C3 C3 C 0 1 Y N N N N N -29.183 -18.459 -20.837 8.880 -4.203 -0.955 C3 T9H 6
T9H N1 N1 N 0 1 Y N N N N N -29.108 -19.047 -22.038 8.235 -5.202 -0.383 N1 T9H 7
T9H C2 C2 C 0 1 Y N N N N N -30.216 -19.021 -22.818 7.065 -5.033 0.203 C2 T9H 8
T9H C1 C1 C 0 1 Y N N N N N -31.406 -18.419 -22.426 6.469 -3.790 0.245 C1 T9H 9
T9H C7 C7 C 0 1 N N R N N N -34.935 -16.894 -19.948 4.579 0.067 -0.246 C7 T9H 10
T9H C23 C23 C 0 1 N N N N N N -34.963 -17.609 -18.589 5.080 0.965 -1.379 C23 T9H 11
T9H C24 C24 C 0 1 Y N N N N N -34.261 -18.939 -18.644 4.556 2.364 -1.180 C24 T9H 12
T9H C27 C27 C 0 1 Y N N N N N -32.948 -19.305 -18.059 5.155 3.409 -0.347 C27 T9H 13
T9H C28 C28 C 0 1 Y N N N N N -32.004 -18.602 -17.303 6.291 3.473 0.462 C28 T9H 14
T9H C29 C29 C 0 1 Y N N N N N -30.835 -19.273 -16.909 6.586 4.629 1.128 C29 T9H 15
T9H C30 C30 C 0 1 Y N N N N N -30.607 -20.615 -17.245 5.764 5.741 1.007 C30 T9H 16
T9H C31 C31 C 0 1 Y N N N N N -31.550 -21.326 -18.001 4.639 5.701 0.215 C31 T9H 17
T9H C26 C26 C 0 1 Y N N N N N -32.717 -20.694 -18.441 4.319 4.534 -0.473 C26 T9H 18
T9H N6 N6 N 0 1 Y N N N N N -33.777 -21.068 -19.170 3.293 4.184 -1.321 N6 T9H 19
T9H C25 C25 C 0 1 Y N N N N N -34.691 -20.070 -19.300 3.453 2.890 -1.737 C25 T9H 20
T9H N3 N3 N 0 1 N N N N N N -34.792 -15.464 -19.624 3.121 -0.051 -0.325 N3 T9H 21
T9H C8 C8 C 0 1 N N N N N N -35.311 -14.487 -20.367 2.407 -0.339 0.781 C8 T9H 22
T9H O3 O3 O 0 1 N N N N N N -35.757 -14.749 -21.483 2.973 -0.502 1.845 O3 T9H 23
T9H C9 C9 C 0 1 Y N N N N N -35.451 -13.055 -19.899 0.940 -0.458 0.701 C9 T9H 24
T9H C22 C22 C 0 1 Y N N N N N -35.912 -12.772 -18.529 0.196 -0.757 1.850 C22 T9H 25
T9H F F F 0 1 N N N N N N -36.145 -13.769 -17.676 0.821 -0.938 3.034 F T9H 26
T9H C21 C21 C 0 1 Y N N N N N -36.094 -11.467 -18.111 -1.177 -0.866 1.767 C21 T9H 27
T9H C12 C12 C 0 1 Y N N N N N -35.847 -10.410 -18.959 -1.815 -0.678 0.546 C12 T9H 28
T9H C11 C11 C 0 1 Y N N N N N -35.423 -10.652 -20.270 -1.072 -0.381 -0.594 C11 T9H 29
T9H C10 C10 C 0 1 Y N N N N N -35.229 -11.952 -20.740 0.286 -0.266 -0.520 C10 T9H 30
T9H N4 N4 N 0 1 N N N N N N -36.077 -9.126 -18.446 -3.199 -0.788 0.463 N4 T9H 31
T9H C20 C20 C 0 1 N N N N N N -36.529 -8.992 -17.062 -3.664 -0.553 -0.911 C20 T9H 32
T9H C19 C19 C 0 1 N N N N N N -36.286 -7.565 -16.575 -5.163 -0.860 -0.999 C19 T9H 33
T9H N5 N5 N 0 1 N N N N N N -36.843 -6.597 -17.525 -5.860 -0.080 0.035 N5 T9H 34
T9H C14 C14 C 0 1 N N N N N N -36.953 -6.927 -18.945 -5.364 -0.157 1.418 C14 T9H 35
T9H C13 C13 C 0 1 N N N N N N -35.925 -7.962 -19.326 -3.857 0.121 1.410 C13 T9H 36
T9H S1 S1 S 0 1 N N N N N N -37.248 -5.182 -17.062 -7.169 0.859 -0.347 S1 T9H 37
T9H O1 O1 O 0 1 N N N N N N -38.107 -4.517 -18.026 -7.255 1.857 0.662 O1 T9H 38
T9H O2 O2 O 0 1 N N N N N N -37.823 -5.133 -15.745 -7.056 1.161 -1.731 O2 T9H 39
T9H C15 C15 C 0 1 Y N N N N N -35.795 -4.425 -17.079 -8.604 -0.149 -0.173 C15 T9H 40
T9H S2 S2 S 0 1 Y N N N N N -34.564 -4.753 -15.932 -9.314 -1.130 -1.449 S2 T9H 41
T9H C18 C18 C 0 1 Y N N N N N -33.450 -3.658 -16.697 -10.576 -1.687 -0.359 C18 T9H 42
T9H C17 C17 C 0 1 Y N N N N N -34.082 -3.132 -17.827 -10.405 -1.135 0.844 C17 T9H 43
T9H C16 C16 C 0 1 Y N N N N N -35.399 -3.552 -18.071 -9.314 -0.290 0.947 C16 T9H 44
T9H H2 H2 H 0 1 N N N N N N -32.445 -16.408 -20.081 7.108 -0.650 -0.299 H2 T9H 45
T9H H7 H7 H 0 1 N N N N N N -35.924 -17.037 -20.407 4.856 0.503 0.714 H7 T9H 46
T9H H4 H4 H 0 1 N N N N N N -30.379 -17.378 -19.419 8.880 -2.117 -1.433 H4 T9H 47
T9H H1 H1 H 0 1 N N N N N N -32.258 -18.422 -23.089 5.513 -3.658 0.731 H1 T9H 48
T9H H3 H3 H 0 1 N N N N N N -28.315 -18.461 -20.194 9.835 -4.384 -1.425 H3 T9H 49
T9H HA HA H 0 1 N N N N N N -30.172 -19.490 -23.790 6.571 -5.878 0.660 HA T9H 50
T9H H231 H231 H 0 0 N N N N N N -34.465 -16.974 -17.842 6.170 0.982 -1.374 H231 T9H 51
T9H H232 H232 H 0 0 N N N N N N -36.010 -17.771 -18.293 4.726 0.577 -2.334 H232 T9H 52
T9H HB HB H 0 1 N N N N N N -34.278 -15.213 -18.803 2.669 0.079 -1.174 HB T9H 53
T9H H25 H25 H 0 1 N N N N N N -35.622 -20.153 -19.841 2.790 2.369 -2.411 H25 T9H 54
T9H H28 H28 H 0 1 N N N N N N -32.170 -17.570 -17.030 6.935 2.611 0.561 H28 T9H 55
T9H H29 H29 H 0 1 N N N N N N -30.092 -18.742 -16.332 7.465 4.677 1.754 H29 T9H 56
T9H H30 H30 H 0 1 N N N N N N -29.700 -21.104 -16.920 6.010 6.648 1.541 H30 T9H 57
T9H H31 H31 H 0 1 N N N N N N -31.375 -22.364 -18.244 4.006 6.571 0.127 H31 T9H 58
T9H H6 H6 H 0 1 N N N N N N -33.884 -21.977 -19.572 2.567 4.769 -1.588 H6 T9H 59
T9H H10 H10 H 0 1 N N N N N N -34.906 -12.111 -21.758 0.857 -0.031 -1.406 H10 T9H 60
T9H H21 H21 H 0 1 N N N N N N -36.435 -11.273 -17.105 -1.755 -1.097 2.650 H21 T9H 61
T9H H11 H11 H 0 1 N N N N N N -35.242 -9.817 -20.931 -1.573 -0.236 -1.540 H11 T9H 62
T9H H201 H201 H 0 0 N N N N N N -37.604 -9.219 -17.005 -3.489 0.488 -1.182 H201 T9H 63
T9H H202 H202 H 0 0 N N N N N N -35.971 -9.695 -16.426 -3.119 -1.204 -1.595 H202 T9H 64
T9H H131 H131 H 0 0 N N N N N N -34.916 -7.540 -19.210 -3.453 -0.040 2.409 H131 T9H 65
T9H H132 H132 H 0 0 N N N N N N -36.077 -8.267 -20.372 -3.680 1.153 1.107 H132 T9H 66
T9H H191 H191 H 0 0 N N N N N N -36.768 -7.430 -15.596 -5.537 -0.579 -1.983 H191 T9H 67
T9H H192 H192 H 0 0 N N N N N N -35.204 -7.395 -16.478 -5.330 -1.924 -0.830 H192 T9H 68
T9H H141 H141 H 0 0 N N N N N N -37.959 -7.323 -19.148 -5.871 0.588 2.031 H141 T9H 69
T9H H142 H142 H 0 0 N N N N N N -36.790 -6.018 -19.542 -5.550 -1.154 1.819 H142 T9H 70
T9H H16 H16 H 0 1 N N N N N N -36.008 -3.240 -18.906 -9.057 0.218 1.865 H16 T9H 71
T9H H18 H18 H 0 1 N N N N N N -32.451 -3.426 -16.360 -11.369 -2.372 -0.622 H18 T9H 72
T9H H17 H17 H 0 1 N N N N N N -33.581 -2.435 -18.482 -11.066 -1.335 1.674 H17 T9H 73
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
T9H O4 C6 DOUB N N 1
T9H C6 N2 SING N N 2
T9H C6 C7 SING N N 3
T9H N2 C5 SING N N 4
T9H C5 C4 DOUB Y N 5
T9H C5 C1 SING Y N 6
T9H C4 C3 SING Y N 7
T9H C3 N1 DOUB Y N 8
T9H N1 C2 SING Y N 9
T9H C2 C1 DOUB Y N 10
T9H C7 C23 SING N N 11
T9H C7 N3 SING N N 12
T9H C23 C24 SING N N 13
T9H C24 C27 SING Y N 14
T9H C24 C25 DOUB Y N 15
T9H C27 C28 SING Y N 16
T9H C27 C26 DOUB Y N 17
T9H C28 C29 DOUB Y N 18
T9H C29 C30 SING Y N 19
T9H C30 C31 DOUB Y N 20
T9H C31 C26 SING Y N 21
T9H C26 N6 SING Y N 22
T9H N6 C25 SING Y N 23
T9H N3 C8 SING N N 24
T9H C8 O3 DOUB N N 25
T9H C8 C9 SING N N 26
T9H C9 C22 SING Y N 27
T9H C9 C10 DOUB Y N 28
T9H C22 F SING N N 29
T9H C22 C21 DOUB Y N 30
T9H C21 C12 SING Y N 31
T9H C12 C11 DOUB Y N 32
T9H C12 N4 SING N N 33
T9H C11 C10 SING Y N 34
T9H N4 C20 SING N N 35
T9H N4 C13 SING N N 36
T9H C20 C19 SING N N 37
T9H C19 N5 SING N N 38
T9H N5 C14 SING N N 39
T9H N5 S1 SING N N 40
T9H C14 C13 SING N N 41
T9H S1 O1 DOUB N N 42
T9H S1 O2 DOUB N N 43
T9H S1 C15 SING N N 44
T9H C15 S2 SING Y N 45
T9H C15 C16 DOUB Y N 46
T9H S2 C18 SING Y N 47
T9H C18 C17 DOUB Y N 48
T9H C17 C16 SING Y N 49
T9H N2 H2 SING N N 50
T9H C7 H7 SING N N 51
T9H C4 H4 SING N N 52
T9H C1 H1 SING N N 53
T9H C3 H3 SING N N 54
T9H C2 HA SING N N 55
T9H C23 H231 SING N N 56
T9H C23 H232 SING N N 57
T9H N3 HB SING N N 58
T9H C25 H25 SING N N 59
T9H C28 H28 SING N N 60
T9H C29 H29 SING N N 61
T9H C30 H30 SING N N 62
T9H C31 H31 SING N N 63
T9H N6 H6 SING N N 64
T9H C10 H10 SING N N 65
T9H C21 H21 SING N N 66
T9H C11 H11 SING N N 67
T9H C20 H201 SING N N 68
T9H C20 H202 SING N N 69
T9H C13 H131 SING N N 70
T9H C13 H132 SING N N 71
T9H C19 H191 SING N N 72
T9H C19 H192 SING N N 73
T9H C14 H141 SING N N 74
T9H C14 H142 SING N N 75
T9H C16 H16 SING N N 76
T9H C18 H18 SING N N 77
T9H C17 H17 SING N N 78
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
T9H SMILES ACDLabs 12.01 O=S(=O)(N5CCN(c4ccc(C(=O)NC(C(=O)Nc1ccncc1)Cc3c2ccccc2nc3)c(F)c4)CC5)c6sccc6
T9H InChI InChI 1.03 InChI=1S/C31H29FN6O4S2/c32-26-19-23(37-13-15-38(16-14-37)44(41,42)29-6-3-17-43-29)7-8-25(26)30(39)36-28(31(40)35-22-9-11-33-12-10-22)18-21-20-34-27-5-2-1-4-24(21)27/h1-12,17,19-20,28,34H,13-16,18H2,(H,36,39)(H,33,35,40)/t28-/m1/s1
T9H InChIKey InChI 1.03 NWMLUXULVUDWBD-MUUNZHRXSA-N
T9H SMILES_CANONICAL CACTVS 3.385 Fc1cc(ccc1C(=O)N[C@H](Cc2c[nH]c3ccccc23)C(=O)Nc4ccncc4)N5CCN(CC5)[S](=O)(=O)c6sccc6
T9H SMILES CACTVS 3.385 Fc1cc(ccc1C(=O)N[CH](Cc2c[nH]c3ccccc23)C(=O)Nc4ccncc4)N5CCN(CC5)[S](=O)(=O)c6sccc6
T9H SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 c1ccc2c(c1)c(c[nH]2)C[C@H](C(=O)Nc3ccncc3)NC(=O)c4ccc(cc4F)N5CCN(CC5)S(=O)(=O)c6cccs6
T9H SMILES "OpenEye OEToolkits" 1.9.2 c1ccc2c(c1)c(c[nH]2)CC(C(=O)Nc3ccncc3)NC(=O)c4ccc(cc4F)N5CCN(CC5)S(=O)(=O)c6cccs6
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
T9H "SYSTEMATIC NAME" ACDLabs 12.01 Nalpha-{2-fluoro-4-[4-(thiophen-2-ylsulfonyl)piperazin-1-yl]benzoyl}-N-pyridin-4-yl-D-tryptophanamide
T9H "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 2-fluoranyl-N-[(2R)-3-(1H-indol-3-yl)-1-oxidanylidene-1-(pyridin-4-ylamino)propan-2-yl]-4-(4-thiophen-2-ylsulfonylpiperazin-1-yl)benzamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
T9H 'Create component' 2012-10-08 EBI
T9H 'Initial release' 2014-04-02 RCSB
T9H 'Modify descriptor' 2014-09-05 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
T9H O4 O 9.487 -8.213 1
T9H C6 C 9.953 -6.787 2
T9H N2 N 11.421 -6.478 3
T9H C5 C 12.422 -7.595 4
T9H C4 C 13.890 -7.285 5
T9H C3 C 14.892 -8.402 6
T9H N1 N 14.426 -9.828 7
T9H C2 C 12.958 -10.137 8
T9H C1 C 11.957 -9.020 9
T9H C7 C 8.951 -5.671 10
T9H C23 C 7.483 -5.981 11
T9H C24 C 7.018 -7.406 12
T9H C27 C 5.598 -7.863 13
T9H C28 C 4.299 -7.113 14
T9H C29 C 3.000 -7.863 15
T9H C30 C 3.000 -9.363 16
T9H C31 C 4.299 -10.113 17
T9H C26 C 5.598 -9.363 18
T9H N6 N 7.018 -9.820 19
T9H C25 C 7.893 -8.613 20
T9H N3 N 9.417 -4.245 21
T9H C8 C 8.415 -3.129 22
T9H O3 O 6.948 -3.438 23
T9H C9 C 8.881 -1.703 24
T9H C22 C 7.880 -0.587 25
T9H F F 6.412 -0.896 26
T9H C21 C 8.345 0.839 27
T9H C12 C 9.813 1.148 28
T9H C11 C 10.815 0.032 29
T9H C10 C 10.349 -1.394 30
T9H N4 N 10.279 2.574 31
T9H C20 C 9.278 3.691 32
T9H C19 C 9.744 5.117 33
T9H N5 N 11.211 5.426 34
T9H C14 C 12.213 4.309 35
T9H C13 C 11.747 2.884 36
T9H S1 S 11.677 6.852 37
T9H O1 O 13.103 6.386 38
T9H O2 O 10.252 7.318 39
T9H C15 C 12.143 8.277 40
T9H S2 S 13.571 8.738 41
T9H C18 C 13.573 10.238 42
T9H C17 C 12.148 10.704 43
T9H C16 C 11.264 9.492 44
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
T9H O4 C6 DOUBLE NONE 1
T9H C6 N2 SINGLE NONE 2
T9H C6 C7 SINGLE NONE 3
T9H N2 C5 SINGLE NONE 4
T9H C5 C4 DOUBLE NONE 5
T9H C5 C1 SINGLE NONE 6
T9H C4 C3 SINGLE NONE 7
T9H C3 N1 DOUBLE NONE 8
T9H N1 C2 SINGLE NONE 9
T9H C2 C1 DOUBLE NONE 10
T9H C7 C23 SINGLE BEGINWEDGE 11
T9H C7 N3 SINGLE NONE 12
T9H C23 C24 SINGLE NONE 13
T9H C24 C27 SINGLE NONE 14
T9H C24 C25 DOUBLE NONE 15
T9H C27 C28 DOUBLE NONE 16
T9H C27 C26 SINGLE NONE 17
T9H C28 C29 SINGLE NONE 18
T9H C29 C30 DOUBLE NONE 19
T9H C30 C31 SINGLE NONE 20
T9H C31 C26 DOUBLE NONE 21
T9H C26 N6 SINGLE NONE 22
T9H N6 C25 SINGLE NONE 23
T9H N3 C8 SINGLE NONE 24
T9H C8 O3 DOUBLE NONE 25
T9H C8 C9 SINGLE NONE 26
T9H C9 C22 DOUBLE NONE 27
T9H C9 C10 SINGLE NONE 28
T9H C22 F SINGLE NONE 29
T9H C22 C21 SINGLE NONE 30
T9H C21 C12 DOUBLE NONE 31
T9H C12 C11 SINGLE NONE 32
T9H C12 N4 SINGLE NONE 33
T9H C11 C10 DOUBLE NONE 34
T9H N4 C20 SINGLE NONE 35
T9H N4 C13 SINGLE NONE 36
T9H C20 C19 SINGLE NONE 37
T9H C19 N5 SINGLE NONE 38
T9H N5 C14 SINGLE NONE 39
T9H N5 S1 SINGLE NONE 40
T9H C14 C13 SINGLE NONE 41
T9H S1 O1 DOUBLE NONE 42
T9H S1 O2 DOUBLE NONE 43
T9H S1 C15 SINGLE NONE 44
T9H C15 S2 SINGLE NONE 45
T9H C15 C16 DOUBLE NONE 46
T9H S2 C18 SINGLE NONE 47
T9H C18 C17 DOUBLE NONE 48
T9H C17 C16 SINGLE NONE 49
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
T9H MurckoScaffold S1 scaffold 'O=C(N[C@H](Cc1c[nH]c2ccccc12)C(=O)Nc1ccncc1)c1ccc(N2CCN(S(=O)(=O)c3cccs3)CC2)cc1' InChI=1S/C31H30N6O4S2/c38-30(22-7-9-25(10-8-22)36-15-17-37(18-16-36)43(40,41)29-6-3-19-42-29)35-28(31(39)34-24-11-13-32-14-12-24)20-23-21-33-27-5-2-1-4-26(23)27/h1-14,19,21,28,33H,15-18,20H2,(H,35,38)(H,32,34,39)/t28-/m1/s1 JWTFOFPFYPOGQM-MUUNZHRXSA-N
T9H amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
T9H indole F2 fragment 'c1ccc2[nH]ccc2c1' InChI=1S/C8H7N/c1-2-4-8-7(3-1)5-6-9-8/h1-6,9H SIKJAQJRHWYJAI-UHFFFAOYSA-N
T9H peptide F3 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
T9H phenyl F4 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
T9H piperazine F5 fragment C1CNCCN1 InChI=1S/C4H10N2/c1-2-6-4-3-5-1/h5-6H,1-4H2 GLUUGHFHXGJENI-UHFFFAOYSA-N
T9H pyridine F6 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
T9H pyrrole F7 fragment 'c1cc[nH]c1' InChI=1S/C4H5N/c1-2-4-5-3-1/h1-5H KAESVJOAVNADME-UHFFFAOYSA-N
T9H thiophen F8 fragment c1ccsc1 InChI=1S/C4H4S/c1-2-4-5-3-1/h1-4H YTPLMLYBLZKORZ-UHFFFAOYSA-N
T9H Z2856434894 F9 fragment CC(C)NCc1ccc(N(C)C)cc1 InChI=1S/C12H20N2/c1-10(2)13-9-11-5-7-12(8-6-11)14(3)4/h5-8,10,13H,9H2,1-4H3 NZXPKDJRJFKEIC-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
T9H O4 S1 1
T9H C6 S1 1
T9H N2 S1 1
T9H C5 S1 1
T9H C4 S1 1
T9H C3 S1 1
T9H N1 S1 1
T9H C2 S1 1
T9H C1 S1 1
T9H C7 S1 1
T9H C23 S1 1
T9H C24 S1 1
T9H C27 S1 1
T9H C28 S1 1
T9H C29 S1 1
T9H C30 S1 1
T9H C31 S1 1
T9H C26 S1 1
T9H N6 S1 1
T9H C25 S1 1
T9H N3 S1 1
T9H C8 S1 1
T9H O3 S1 1
T9H C9 S1 1
T9H C22 S1 1
T9H C21 S1 1
T9H C12 S1 1
T9H C11 S1 1
T9H C10 S1 1
T9H N4 S1 1
T9H C20 S1 1
T9H C19 S1 1
T9H N5 S1 1
T9H C14 S1 1
T9H C13 S1 1
T9H S1 S1 1
T9H O1 S1 1
T9H O2 S1 1
T9H C15 S1 1
T9H S2 S1 1
T9H C18 S1 1
T9H C17 S1 1
T9H C16 S1 1
T9H N2 F1 1
T9H C6 F1 1
T9H O4 F1 1
T9H C7 F1 1
T9H N3 F1 2
T9H C8 F1 2
T9H O3 F1 2
T9H C9 F1 2
T9H C26 F2 1
T9H C27 F2 1
T9H C24 F2 1
T9H C25 F2 1
T9H N6 F2 1
T9H C28 F2 1
T9H C29 F2 1
T9H C30 F2 1
T9H C31 F2 1
T9H O4 F3 1
T9H C6 F3 1
T9H C7 F3 1
T9H N3 F3 1
T9H C27 F4 1
T9H C28 F4 1
T9H C29 F4 1
T9H C30 F4 1
T9H C31 F4 1
T9H C26 F4 1
T9H C9 F4 2
T9H C22 F4 2
T9H C21 F4 2
T9H C12 F4 2
T9H C11 F4 2
T9H C10 F4 2
T9H N4 F5 1
T9H C20 F5 1
T9H C19 F5 1
T9H N5 F5 1
T9H C14 F5 1
T9H C13 F5 1
T9H C3 F6 1
T9H C4 F6 1
T9H C5 F6 1
T9H C1 F6 1
T9H C2 F6 1
T9H N1 F6 1
T9H C26 F7 1
T9H C27 F7 1
T9H C24 F7 1
T9H C25 F7 1
T9H N6 F7 1
T9H C15 F8 1
T9H C16 F8 1
T9H C17 F8 1
T9H C18 F8 1
T9H S2 F8 1
T9H C6 F9 1
T9H C7 F9 1
T9H C23 F9 1
T9H N3 F9 1
T9H C8 F9 1
T9H C9 F9 1
T9H C22 F9 1
T9H C21 F9 1
T9H C12 F9 1
T9H C11 F9 1
T9H C10 F9 1
T9H N4 F9 1
T9H C20 F9 1
T9H C13 F9 1
#
_pdbe_chem_comp_rdkit_properties.comp_id T9H
_pdbe_chem_comp_rdkit_properties.exactmw 632.168
_pdbe_chem_comp_rdkit_properties.amw 632.743
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 10
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 9
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 44
_pdbe_chem_comp_rdkit_properties.NumAtoms 73
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 13
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.194
_pdbe_chem_comp_rdkit_properties.NumRings 6
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 5
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 4
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 298.054
_pdbe_chem_comp_rdkit_properties.tpsa 127.500
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.847
_pdbe_chem_comp_rdkit_properties.CrippenMR 163.998
_pdbe_chem_comp_rdkit_properties.chi0v 22.644
_pdbe_chem_comp_rdkit_properties.chi1v 13.639
_pdbe_chem_comp_rdkit_properties.chi2v 7.689
_pdbe_chem_comp_rdkit_properties.chi3v 7.689
_pdbe_chem_comp_rdkit_properties.chi4v 4.886
_pdbe_chem_comp_rdkit_properties.chi0n 50.011
_pdbe_chem_comp_rdkit_properties.chi1n 25.724
_pdbe_chem_comp_rdkit_properties.chi2n 5.082
_pdbe_chem_comp_rdkit_properties.chi3n 5.082
_pdbe_chem_comp_rdkit_properties.chi4n 3.151
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -4.590
_pdbe_chem_comp_rdkit_properties.kappa1 10.789
_pdbe_chem_comp_rdkit_properties.kappa2 12.564
_pdbe_chem_comp_rdkit_properties.kappa3 6.204
_pdbe_chem_comp_rdkit_properties.Phi 3.081
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
T9H UniChem PDBe T9H
T9H UniChem ZINC ZINC000098209438
T9H UniChem PubChem 73386637
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
T9H O4 -6.098 2.242 2.342 ETKDGv3 1
T9H C6 -4.889 2.238 1.980 ETKDGv3 2
T9H N2 -4.449 3.148 0.958 ETKDGv3 3
T9H C5 -5.311 3.697 -0.054 ETKDGv3 4
T9H C4 -6.378 3.021 -0.519 ETKDGv3 5
T9H C3 -7.208 3.616 -1.584 ETKDGv3 6
T9H N1 -6.898 4.777 -2.084 ETKDGv3 7
T9H C2 -5.751 5.511 -1.623 ETKDGv3 8
T9H C1 -4.976 5.008 -0.655 ETKDGv3 9
T9H C7 -3.893 1.371 2.719 ETKDGv3 10
T9H C23 -4.487 -0.003 3.109 ETKDGv3 11
T9H C24 -4.734 -0.887 1.914 ETKDGv3 12
T9H C27 -3.776 -1.809 1.304 ETKDGv3 13
T9H C28 -2.549 -2.199 1.660 ETKDGv3 14
T9H C29 -1.836 -3.138 0.753 ETKDGv3 15
T9H C30 -2.429 -3.578 -0.380 ETKDGv3 16
T9H C31 -3.805 -3.130 -0.733 ETKDGv3 17
T9H C26 -4.411 -2.287 0.105 ETKDGv3 18
T9H N6 -5.698 -1.708 -0.015 ETKDGv3 19
T9H C25 -5.821 -0.851 1.128 ETKDGv3 20
T9H N3 -2.678 1.180 1.919 ETKDGv3 21
T9H C8 -1.393 0.943 2.516 ETKDGv3 22
T9H O3 -1.251 1.041 3.765 ETKDGv3 23
T9H C9 -0.247 0.502 1.692 ETKDGv3 24
T9H C22 -0.029 0.992 0.455 ETKDGv3 25
T9H F -0.803 1.982 -0.058 ETKDGv3 26
T9H C21 1.093 0.480 -0.360 ETKDGv3 27
T9H C12 1.907 -0.478 0.119 ETKDGv3 28
T9H C11 1.687 -0.988 1.494 ETKDGv3 29
T9H C10 0.677 -0.522 2.236 ETKDGv3 30
T9H N4 2.992 -0.991 -0.678 ETKDGv3 31
T9H C20 3.853 -0.076 -1.441 ETKDGv3 32
T9H C19 5.171 -0.759 -1.817 ETKDGv3 33
T9H N5 5.598 -1.615 -0.700 ETKDGv3 34
T9H C14 4.705 -2.783 -0.542 ETKDGv3 35
T9H C13 3.220 -2.438 -0.787 ETKDGv3 36
T9H S1 7.241 -2.151 -0.949 ETKDGv3 37
T9H O1 7.373 -2.766 -2.316 ETKDGv3 38
T9H O2 7.611 -3.170 0.092 ETKDGv3 39
T9H C15 8.329 -0.782 -0.810 ETKDGv3 40
T9H S2 8.099 0.577 0.311 ETKDGv3 41
T9H C18 9.591 1.373 -0.246 ETKDGv3 42
T9H C17 10.168 0.633 -1.191 ETKDGv3 43
T9H C16 9.442 -0.613 -1.518 ETKDGv3 44
T9H H2 -3.461 3.486 0.991 ETKDGv3 45
T9H H7 -3.637 1.914 3.655 ETKDGv3 46
T9H H4 -6.628 2.036 -0.149 ETKDGv3 47
T9H H1 -4.112 5.562 -0.311 ETKDGv3 48
T9H H3 -8.074 3.085 -1.955 ETKDGv3 49
T9H HA -5.516 6.471 -2.064 ETKDGv3 50
T9H H231 -3.782 -0.518 3.795 ETKDGv3 51
T9H H232 -5.434 0.132 3.675 ETKDGv3 52
T9H HB -2.799 0.961 0.904 ETKDGv3 53
T9H H25 -6.683 -0.222 1.306 ETKDGv3 54
T9H H28 -2.085 -1.845 2.569 ETKDGv3 55
T9H H29 -0.834 -3.464 1.002 ETKDGv3 56
T9H H30 -1.903 -4.259 -1.037 ETKDGv3 57
T9H H31 -4.292 -3.473 -1.636 ETKDGv3 58
T9H H6 -6.385 -1.832 -0.791 ETKDGv3 59
T9H H10 0.530 -0.911 3.236 ETKDGv3 60
T9H H21 1.231 0.874 -1.358 ETKDGv3 61
T9H H11 2.356 -1.730 1.912 ETKDGv3 62
T9H H201 4.083 0.814 -0.814 ETKDGv3 63
T9H H202 3.330 0.262 -2.361 ETKDGv3 64
T9H H131 2.576 -3.011 -0.086 ETKDGv3 65
T9H H132 2.937 -2.757 -1.814 ETKDGv3 66
T9H H191 5.037 -1.361 -2.744 ETKDGv3 67
T9H H192 5.929 0.028 -2.023 ETKDGv3 68
T9H H141 4.812 -3.166 0.495 ETKDGv3 69
T9H H142 4.991 -3.606 -1.236 ETKDGv3 70
T9H H16 9.786 -1.319 -2.262 ETKDGv3 71
T9H H18 9.979 2.314 0.121 ETKDGv3 72
T9H H17 11.091 0.923 -1.676 ETKDGv3 73
#