data_T9V
#
_chem_comp.id T9V
_chem_comp.name N-(4-methoxyphenyl)acetamide
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C9 H11 N O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2020-03-18
_chem_comp.pdbx_modified_date 2020-06-05
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 165.189
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code T9V
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5QYH
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
T9V C4 C1 C 0 1 Y N N N N N 23.904 14.343 36.489 1.503 -1.519 -0.224 C4 T9V 1
T9V C5 C2 C 0 1 Y N N N N N 23.649 13.422 37.490 2.092 -0.275 -0.049 C5 T9V 2
T9V C6 C3 C 0 1 Y N N N N N 24.431 13.404 38.631 1.307 0.828 0.252 C6 T9V 3
T9V C7 C4 C 0 1 Y N N N N N 25.475 14.300 38.766 -0.061 0.690 0.378 C7 T9V 4
T9V C8 C5 C 0 1 N N N N N N 22.422 11.595 38.438 3.978 1.171 0.021 C8 T9V 5
T9V O O1 O 0 1 N N N N N N 28.862 15.089 37.807 -2.391 1.343 -0.470 O T9V 6
T9V C1 C6 C 0 1 N N N N N N 28.072 15.807 38.416 -2.858 0.295 -0.074 C1 T9V 7
T9V C C7 C 0 1 N N N N N N 28.413 16.417 39.745 -4.352 0.103 -0.035 C T9V 8
T9V N N1 N 0 1 N N N N N N 26.836 16.100 37.948 -2.039 -0.696 0.330 N T9V 9
T9V C2 C8 C 0 1 Y N N N N N 25.747 15.219 37.766 -0.651 -0.555 0.203 C2 T9V 10
T9V O1 O2 O 0 1 N N N N N N 22.634 12.511 37.366 3.439 -0.138 -0.172 O1 T9V 11
T9V C3 C9 C 0 1 Y N N N N N 24.951 15.239 36.626 0.135 -1.659 -0.099 C3 T9V 12
T9V H1 H1 H 0 1 N N N N N N 23.288 14.363 35.602 2.114 -2.377 -0.463 H1 T9V 13
T9V H2 H2 H 0 1 N N N N N N 24.226 12.691 39.416 1.766 1.796 0.389 H2 T9V 14
T9V H3 H3 H 0 1 N N N N N N 26.083 14.283 39.658 -0.672 1.549 0.613 H3 T9V 15
T9V H4 H4 H 0 1 N N N N N N 21.579 10.932 38.193 3.739 1.518 1.027 H4 T9V 16
T9V H5 H5 H 0 1 N N N N N N 23.330 10.993 38.590 5.060 1.141 -0.105 H5 T9V 17
T9V H6 H6 H 0 1 N N N N N N 22.194 12.154 39.358 3.546 1.854 -0.710 H6 T9V 18
T9V H7 H7 H 0 1 N N N N N N 29.429 16.115 40.038 -4.689 -0.316 -0.983 H7 T9V 19
T9V H8 H8 H 0 1 N N N N N N 28.364 17.513 39.669 -4.609 -0.580 0.775 H8 T9V 20
T9V H9 H9 H 0 1 N N N N N N 27.695 16.070 40.503 -4.838 1.064 0.132 H9 T9V 21
T9V H10 H10 H 0 1 N N N N N N 26.674 17.056 37.701 -2.411 -1.508 0.709 H10 T9V 22
T9V H11 H11 H 0 1 N N N N N N 25.150 15.957 35.844 -0.324 -2.627 -0.235 H11 T9V 23
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
T9V C4 C3 DOUB Y N 1
T9V C4 C5 SING Y N 2
T9V C3 C2 SING Y N 3
T9V O1 C5 SING N N 4
T9V O1 C8 SING N N 5
T9V C5 C6 DOUB Y N 6
T9V C2 N SING N N 7
T9V C2 C7 DOUB Y N 8
T9V O C1 DOUB N N 9
T9V N C1 SING N N 10
T9V C1 C SING N N 11
T9V C6 C7 SING Y N 12
T9V C4 H1 SING N N 13
T9V C6 H2 SING N N 14
T9V C7 H3 SING N N 15
T9V C8 H4 SING N N 16
T9V C8 H5 SING N N 17
T9V C8 H6 SING N N 18
T9V C H7 SING N N 19
T9V C H8 SING N N 20
T9V C H9 SING N N 21
T9V N H10 SING N N 22
T9V C3 H11 SING N N 23
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
T9V SMILES ACDLabs 12.01 c1cc(ccc1OC)NC(=O)C
T9V InChI InChI 1.03 InChI=1S/C9H11NO2/c1-7(11)10-8-3-5-9(12-2)6-4-8/h3-6H,1-2H3,(H,10,11)
T9V InChIKey InChI 1.03 XVAIDCNLVLTVFM-UHFFFAOYSA-N
T9V SMILES_CANONICAL CACTVS 3.385 COc1ccc(NC(C)=O)cc1
T9V SMILES CACTVS 3.385 COc1ccc(NC(C)=O)cc1
T9V SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 CC(=O)Nc1ccc(cc1)OC
T9V SMILES "OpenEye OEToolkits" 2.0.7 CC(=O)Nc1ccc(cc1)OC
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
T9V "SYSTEMATIC NAME" ACDLabs 12.01 N-(4-methoxyphenyl)acetamide
T9V "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 ~{N}-(4-methoxyphenyl)ethanamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
T9V 'Create component' 2020-03-18 RCSB
T9V 'Initial release' 2020-06-10 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
T9V C4 C 5.598 -1.500 1
T9V C5 C 4.299 -2.250 2
T9V C6 C 3.000 -1.500 3
T9V C7 C 3.000 0.000 4
T9V C8 C 3.000 -4.500 5
T9V O O 6.897 2.250 6
T9V C1 C 5.598 3.000 7
T9V C C 5.598 4.500 8
T9V N N 4.299 2.250 9
T9V C2 C 4.299 0.750 10
T9V O1 O 4.299 -3.750 11
T9V C3 C 5.598 0.000 12
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
T9V C4 C3 DOUBLE NONE 1
T9V C4 C5 SINGLE NONE 2
T9V C3 C2 SINGLE NONE 3
T9V O1 C5 SINGLE NONE 4
T9V O1 C8 SINGLE NONE 5
T9V C5 C6 DOUBLE NONE 6
T9V C2 N SINGLE NONE 7
T9V C2 C7 DOUBLE NONE 8
T9V O C1 DOUBLE NONE 9
T9V N C1 SINGLE NONE 10
T9V C1 C SINGLE NONE 11
T9V C6 C7 SINGLE NONE 12
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
T9V MurckoScaffold S1 scaffold c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
T9V amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
T9V phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
T9V C4 S1 1
T9V C5 S1 1
T9V C6 S1 1
T9V C7 S1 1
T9V C2 S1 1
T9V C3 S1 1
T9V N F1 1
T9V C1 F1 1
T9V O F1 1
T9V C F1 1
T9V C4 F2 1
T9V C3 F2 1
T9V C2 F2 1
T9V C7 F2 1
T9V C6 F2 1
T9V C5 F2 1
#
_pdbe_chem_comp_rdkit_properties.comp_id T9V
_pdbe_chem_comp_rdkit_properties.exactmw 165.079
_pdbe_chem_comp_rdkit_properties.amw 165.192
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 3
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 4
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 2
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 12
_pdbe_chem_comp_rdkit_properties.NumAtoms 23
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 3
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.222
_pdbe_chem_comp_rdkit_properties.NumRings 1
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 86.864
_pdbe_chem_comp_rdkit_properties.tpsa 38.330
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.811
_pdbe_chem_comp_rdkit_properties.CrippenMR 45.864
_pdbe_chem_comp_rdkit_properties.chi0v 5.764
_pdbe_chem_comp_rdkit_properties.chi1v 2.810
_pdbe_chem_comp_rdkit_properties.chi2v 0.904
_pdbe_chem_comp_rdkit_properties.chi3v 0.904
_pdbe_chem_comp_rdkit_properties.chi4v 0.503
_pdbe_chem_comp_rdkit_properties.chi0n 16.764
_pdbe_chem_comp_rdkit_properties.chi1n 8.257
_pdbe_chem_comp_rdkit_properties.chi2n 0.904
_pdbe_chem_comp_rdkit_properties.chi3n 0.904
_pdbe_chem_comp_rdkit_properties.chi4n 0.503
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.510
_pdbe_chem_comp_rdkit_properties.kappa1 2.046
_pdbe_chem_comp_rdkit_properties.kappa2 3.759
_pdbe_chem_comp_rdkit_properties.kappa3 2.268
_pdbe_chem_comp_rdkit_properties.Phi 0.641
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
T9V UniChem ChEMBL CHEMBL3183230
T9V UniChem PDBe T9V
T9V UniChem ChEBI 139354
T9V UniChem ZINC ZINC000000142828
T9V UniChem fdasrs 13E468TFHP
T9V UniChem HMDB HMDB0255013
T9V UniChem Mcule MCULE-5011233430
T9V UniChem NMRShiftDB 89598
T9V UniChem 'EPA CompTox Dashboard' DTXSID6026325
T9V UniChem BRENDA 111272
T9V UniChem BRENDA 111338
T9V UniChem BRENDA 143155
T9V UniChem BRENDA 145350
T9V UniChem BRENDA 32921
T9V UniChem BRENDA 36660
T9V UniChem BRENDA 50924
T9V UniChem BRENDA 57494
T9V UniChem 'Probes And Drugs' PD143850
T9V UniChem ChemicalBook CB6310310
T9V UniChem eMolecules 507273
T9V UniChem SureChEMBL SCHEMBL171415
T9V UniChem SureChEMBL SCHEMBL17955676
T9V UniChem 'PubChem TPHARMA' 14940752
T9V UniChem PubChem 5827
T9V UniChem ACTor 51-66-1
T9V UniChem Nikkaji J4.122J
T9V UniChem BRENDA 145749
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
T9V C4 1.350 0.595 -0.602 ETKDGv3 1
T9V C5 2.177 -0.274 0.276 ETKDGv3 2
T9V C6 1.570 -1.177 1.058 ETKDGv3 3
T9V C7 0.098 -1.303 1.058 ETKDGv3 4
T9V C8 4.332 0.730 -0.472 ETKDGv3 5
T9V O -2.613 1.628 0.103 ETKDGv3 6
T9V C1 -3.005 0.430 0.066 ETKDGv3 7
T9V C -4.458 0.142 -0.120 ETKDGv3 8
T9V N -2.086 -0.648 0.296 ETKDGv3 9
T9V C2 -0.656 -0.500 0.290 ETKDGv3 10
T9V O1 3.575 -0.186 0.311 ETKDGv3 11
T9V C3 0.015 0.485 -0.598 ETKDGv3 12
T9V H1 1.815 1.315 -1.263 ETKDGv3 13
T9V H2 2.157 -1.822 1.700 ETKDGv3 14
T9V H3 -0.365 -2.043 1.699 ETKDGv3 15
T9V H4 4.165 0.538 -1.553 ETKDGv3 16
T9V H5 5.410 0.593 -0.249 ETKDGv3 17
T9V H6 4.047 1.774 -0.221 ETKDGv3 18
T9V H7 -4.935 -0.011 0.870 ETKDGv3 19
T9V H8 -4.586 -0.775 -0.733 ETKDGv3 20
T9V H9 -4.957 0.988 -0.638 ETKDGv3 21
T9V H10 -2.487 -1.580 0.550 ETKDGv3 22
T9V H11 -0.565 1.101 -1.272 ETKDGv3 23
#