data_TDH
#
_chem_comp.id TDH
_chem_comp.name "4,4'-(1H-1,2,3-triazole-1,5-diyl)diphenol"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C14 H11 N3 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2012-07-20
_chem_comp.pdbx_modified_date 2012-08-31
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 253.256
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code TDH
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4G2G
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
TDH CAC CAC C 0 1 Y N N N N N -9.269 18.934 1.275 -1.940 1.766 -0.583 CAC TDH 1
TDH CAD CAD C 0 1 Y N N N N N -11.011 19.773 2.805 -3.703 0.432 0.368 CAD TDH 2
TDH CAE CAE C 0 1 Y N N N N N -15.425 15.508 4.370 2.048 1.621 0.941 CAE TDH 3
TDH CAF CAF C 0 1 Y N N N N N -14.656 17.821 3.976 3.485 0.625 -0.709 CAF TDH 4
TDH CAG CAG C 0 1 Y N N N N N -9.492 17.622 1.728 -1.093 0.678 -0.550 CAG TDH 5
TDH CAH CAH C 0 1 Y N N N N N -11.231 18.460 3.273 -2.862 -0.660 0.404 CAH TDH 6
TDH CAI CAI C 0 1 Y N N N N N -14.111 15.054 4.152 1.235 0.506 0.907 CAI TDH 7
TDH CAJ CAJ C 0 1 Y N N N N N -13.354 17.347 3.763 2.676 -0.493 -0.740 CAJ TDH 8
TDH CAK CAK C 0 1 Y N N N N N -9.740 15.149 3.203 -1.008 -3.028 -0.031 CAK TDH 9
TDH CAN CAN C 0 1 Y N N N N N -10.035 19.992 1.819 -3.245 1.646 -0.125 CAN TDH 10
TDH CAO CAO C 0 1 Y N N N N N -15.681 16.892 4.274 3.174 1.684 0.131 CAO TDH 11
TDH CAP CAP C 0 1 Y N N N N N -10.473 17.394 2.729 -1.550 -0.544 -0.055 CAP TDH 12
TDH CAQ CAQ C 0 1 Y N N N N N -13.051 15.960 3.841 1.547 -0.555 0.066 CAQ TDH 13
TDH CAR CAR C 0 1 Y N N N N N -10.691 16.078 3.174 -0.645 -1.714 -0.018 CAR TDH 14
TDH NAL NAL N 0 1 Y N N N N N -10.299 14.059 3.701 0.090 -3.778 0.014 NAL TDH 15
TDH NAM NAM N 0 1 Y N N N N N -11.478 14.313 3.962 1.138 -3.031 0.049 NAM TDH 16
TDH NAS NAS N 0 1 Y N N N N N -11.793 15.479 3.676 0.724 -1.691 0.035 NAS TDH 17
TDH OAA OAA O 0 1 N N N N N N -9.814 21.262 1.373 -4.076 2.720 -0.159 OAA TDH 18
TDH OAB OAB O 0 1 N N N N N N -16.942 17.352 4.486 3.971 2.785 0.161 OAB TDH 19
TDH H1 H1 H 0 1 N N N N N N -8.522 19.132 0.521 -1.586 2.714 -0.962 H1 TDH 20
TDH H2 H2 H 0 1 N N N N N N -11.585 20.598 3.200 -4.719 0.343 0.724 H2 TDH 21
TDH H3 H3 H 0 1 N N N N N N -16.218 14.814 4.605 1.806 2.446 1.594 H3 TDH 22
TDH H4 H4 H 0 1 N N N N N N -14.873 18.877 3.914 4.361 0.674 -1.338 H4 TDH 23
TDH H5 H5 H 0 1 N N N N N N -8.925 16.798 1.320 -0.078 0.772 -0.907 H5 TDH 24
TDH H6 H6 H 0 1 N N N N N N -11.969 18.270 4.038 -3.219 -1.605 0.788 H6 TDH 25
TDH H7 H7 H 0 1 N N N N N N -13.899 13.997 4.221 0.357 0.458 1.534 H7 TDH 26
TDH H8 H8 H 0 1 N N N N N N -12.566 18.049 3.535 2.918 -1.318 -1.394 H8 TDH 27
TDH H9 H9 H 0 1 N N N N N N -8.715 15.262 2.883 -2.022 -3.400 -0.066 H9 TDH 28
TDH H10 H10 H 0 1 N N N N N N -10.396 21.862 1.824 -4.581 2.802 -0.980 H10 TDH 29
TDH H11 H11 H 0 1 N N N N N N -17.519 16.621 4.674 3.718 3.470 -0.472 H11 TDH 30
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
TDH CAC CAG DOUB Y N 1
TDH CAC CAN SING Y N 2
TDH OAA CAN SING N N 3
TDH CAG CAP SING Y N 4
TDH CAN CAD DOUB Y N 5
TDH CAP CAR SING N N 6
TDH CAP CAH DOUB Y N 7
TDH CAD CAH SING Y N 8
TDH CAR CAK DOUB Y N 9
TDH CAR NAS SING Y N 10
TDH CAK NAL SING Y N 11
TDH NAS CAQ SING N N 12
TDH NAS NAM SING Y N 13
TDH NAL NAM DOUB Y N 14
TDH CAJ CAQ DOUB Y N 15
TDH CAJ CAF SING Y N 16
TDH CAQ CAI SING Y N 17
TDH CAF CAO DOUB Y N 18
TDH CAI CAE DOUB Y N 19
TDH CAO CAE SING Y N 20
TDH CAO OAB SING N N 21
TDH CAC H1 SING N N 22
TDH CAD H2 SING N N 23
TDH CAE H3 SING N N 24
TDH CAF H4 SING N N 25
TDH CAG H5 SING N N 26
TDH CAH H6 SING N N 27
TDH CAI H7 SING N N 28
TDH CAJ H8 SING N N 29
TDH CAK H9 SING N N 30
TDH OAA H10 SING N N 31
TDH OAB H11 SING N N 32
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
TDH SMILES ACDLabs 12.01 n2nn(c1ccc(O)cc1)c(c2)c3ccc(O)cc3
TDH InChI InChI 1.03 InChI=1S/C14H11N3O2/c18-12-5-1-10(2-6-12)14-9-15-16-17(14)11-3-7-13(19)8-4-11/h1-9,18-19H
TDH InChIKey InChI 1.03 VJAKQEJLSICLIC-UHFFFAOYSA-N
TDH SMILES_CANONICAL CACTVS 3.370 Oc1ccc(cc1)n2nncc2c3ccc(O)cc3
TDH SMILES CACTVS 3.370 Oc1ccc(cc1)n2nncc2c3ccc(O)cc3
TDH SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 c1cc(ccc1c2cnnn2c3ccc(cc3)O)O
TDH SMILES "OpenEye OEToolkits" 1.7.6 c1cc(ccc1c2cnnn2c3ccc(cc3)O)O
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
TDH "SYSTEMATIC NAME" ACDLabs 12.01 "4,4'-(1H-1,2,3-triazole-1,5-diyl)diphenol"
TDH "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 4-[3-(4-hydroxyphenyl)-1,2,3-triazol-4-yl]phenol
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
TDH 'Create component' 2012-07-20 PDBJ
TDH 'Initial release' 2012-08-31 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
TDH CAC C 5.429 3.037 1
TDH CAD C 6.232 0.566 2
TDH CAE C 11.910 -1.672 3
TDH CAF C 9.312 -1.672 4
TDH CAG C 6.856 3.500 5
TDH CAH C 7.659 1.029 6
TDH CAI C 11.910 -0.172 7
TDH CAJ C 9.312 -0.172 8
TDH CAK C 9.861 4.387 9
TDH CAN C 5.118 1.569 10
TDH CAO C 10.611 -2.422 11
TDH CAP C 7.971 2.497 12
TDH CAQ C 10.611 0.578 13
TDH CAR C 9.398 2.960 14
TDH NAL N 11.361 4.387 15
TDH NAM N 11.825 2.960 16
TDH NAS N 10.611 2.078 17
TDH OAA O 3.691 1.106 18
TDH OAB O 10.611 -3.922 19
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
TDH CAC CAG DOUBLE NONE 1
TDH CAC CAN SINGLE NONE 2
TDH OAA CAN SINGLE NONE 3
TDH CAG CAP SINGLE NONE 4
TDH CAN CAD DOUBLE NONE 5
TDH CAP CAR SINGLE NONE 6
TDH CAP CAH DOUBLE NONE 7
TDH CAD CAH SINGLE NONE 8
TDH CAR CAK DOUBLE NONE 9
TDH CAR NAS SINGLE NONE 10
TDH CAK NAL SINGLE NONE 11
TDH NAS CAQ SINGLE NONE 12
TDH NAS NAM SINGLE NONE 13
TDH NAL NAM DOUBLE NONE 14
TDH CAJ CAQ DOUBLE NONE 15
TDH CAJ CAF SINGLE NONE 16
TDH CAQ CAI SINGLE NONE 17
TDH CAF CAO DOUBLE NONE 18
TDH CAI CAE DOUBLE NONE 19
TDH CAO CAE SINGLE NONE 20
TDH CAO OAB SINGLE NONE 21
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
TDH MurckoScaffold S1 scaffold c1ccc(-c2cnnn2-c2ccccc2)cc1 InChI=1S/C14H11N3/c1-3-7-12(8-4-1)14-11-15-16-17(14)13-9-5-2-6-10-13/h1-11H LVMHTARDQMFJFA-UHFFFAOYSA-N
TDH phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
TDH CAC S1 1
TDH CAD S1 1
TDH CAE S1 1
TDH CAF S1 1
TDH CAG S1 1
TDH CAH S1 1
TDH CAI S1 1
TDH CAJ S1 1
TDH CAK S1 1
TDH CAN S1 1
TDH CAO S1 1
TDH CAP S1 1
TDH CAQ S1 1
TDH CAR S1 1
TDH NAL S1 1
TDH NAM S1 1
TDH NAS S1 1
TDH CAC F1 1
TDH CAG F1 1
TDH CAP F1 1
TDH CAH F1 1
TDH CAD F1 1
TDH CAN F1 1
TDH CAE F1 2
TDH CAI F1 2
TDH CAQ F1 2
TDH CAJ F1 2
TDH CAF F1 2
TDH CAO F1 2
#
_pdbe_chem_comp_rdkit_properties.comp_id TDH
_pdbe_chem_comp_rdkit_properties.exactmw 253.085
_pdbe_chem_comp_rdkit_properties.amw 253.261
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 5
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 4
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 19
_pdbe_chem_comp_rdkit_properties.NumAtoms 30
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 5
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 124.557
_pdbe_chem_comp_rdkit_properties.tpsa 71.170
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.851
_pdbe_chem_comp_rdkit_properties.CrippenMR 66.922
_pdbe_chem_comp_rdkit_properties.chi0v 9.158
_pdbe_chem_comp_rdkit_properties.chi1v 4.979
_pdbe_chem_comp_rdkit_properties.chi2v 2.141
_pdbe_chem_comp_rdkit_properties.chi3v 2.141
_pdbe_chem_comp_rdkit_properties.chi4v 1.345
_pdbe_chem_comp_rdkit_properties.chi0n 20.158
_pdbe_chem_comp_rdkit_properties.chi1n 10.296
_pdbe_chem_comp_rdkit_properties.chi2n 2.141
_pdbe_chem_comp_rdkit_properties.chi3n 2.141
_pdbe_chem_comp_rdkit_properties.chi4n 1.345
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.820
_pdbe_chem_comp_rdkit_properties.kappa1 4.379
_pdbe_chem_comp_rdkit_properties.kappa2 4.453
_pdbe_chem_comp_rdkit_properties.kappa3 2.131
_pdbe_chem_comp_rdkit_properties.Phi 1.026
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
TDH UniChem PDBe TDH
TDH UniChem ZINC ZINC000095921370
TDH UniChem PubChem 135566742
TDH UniChem BRENDA 171798
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
TDH CAC 3.299 -0.022 1.656 ETKDGv3 1
TDH CAD 2.165 1.764 0.442 ETKDGv3 2
TDH CAE -2.625 0.611 0.793 ETKDGv3 3
TDH CAF -3.577 0.537 -1.452 ETKDGv3 4
TDH CAG 2.625 -0.962 0.982 ETKDGv3 5
TDH CAH 1.422 0.728 -0.305 ETKDGv3 6
TDH CAI -1.602 -0.172 0.428 ETKDGv3 7
TDH CAJ -2.449 -0.329 -1.857 ETKDGv3 8
TDH CAK 1.390 -2.785 -1.190 ETKDGv3 9
TDH CAN 3.060 1.409 1.377 ETKDGv3 10
TDH CAO -3.661 0.989 -0.195 ETKDGv3 11
TDH CAP 1.626 -0.577 -0.048 ETKDGv3 12
TDH CAQ -1.492 -0.657 -0.973 ETKDGv3 13
TDH CAR 0.892 -1.621 -0.796 ETKDGv3 14
TDH NAL 0.432 -3.431 -2.027 ETKDGv3 15
TDH NAM -0.588 -2.676 -2.114 ETKDGv3 16
TDH NAS -0.404 -1.501 -1.379 ETKDGv3 17
TDH OAA 3.770 2.373 2.091 ETKDGv3 18
TDH OAB -4.724 1.808 0.177 ETKDGv3 19
TDH H1 4.021 -0.310 2.410 ETKDGv3 20
TDH H2 1.982 2.808 0.226 ETKDGv3 21
TDH H3 -2.699 0.959 1.815 ETKDGv3 22
TDH H4 -4.332 0.806 -2.181 ETKDGv3 23
TDH H5 2.804 -2.006 1.204 ETKDGv3 24
TDH H6 0.724 1.043 -1.071 ETKDGv3 25
TDH H7 -0.868 -0.462 1.167 ETKDGv3 26
TDH H8 -2.396 -0.681 -2.879 ETKDGv3 27
TDH H9 2.381 -3.166 -0.979 ETKDGv3 28
TDH H10 3.634 3.364 1.929 ETKDGv3 29
TDH H11 -4.809 2.160 1.123 ETKDGv3 30
#