data_U6J
#
_chem_comp.id U6J
_chem_comp.name "(1r,2R,3S,4r,5R,6S)-4-hydroxy-2,3,5,6-tetrakis(phosphonooxy)cyclohexyl trihydrogen diphosphate"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C6 H18 O24 P6"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2020-04-28
_chem_comp.pdbx_modified_date 2021-02-26
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 660.035
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code U6J
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6WO8
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
U6J C6 C1 C 0 1 N N S N N N 17.172 4.501 16.022 -0.945 -1.162 -0.379 C6 U6J 1
U6J C5 C2 C 0 1 N N N N N N 15.912 5.291 15.799 -0.029 -0.058 0.154 C5 U6J 2
U6J C4 C3 C 0 1 N N R N N N 16.156 6.159 14.574 -0.494 1.296 -0.385 C4 U6J 3
U6J C3 C4 C 0 1 N N S N N N 16.377 5.275 13.314 -1.930 1.561 0.072 C3 U6J 4
U6J C2 C5 C 0 1 N N N N N N 17.523 4.356 13.497 -2.846 0.457 -0.461 C2 U6J 5
U6J C1 C6 C 0 1 N N R N N N 17.302 3.579 14.803 -2.381 -0.897 0.078 C1 U6J 6
U6J O24 O1 O 0 1 N N N N N N 14.198 8.863 13.100 0.325 3.948 -1.821 O24 U6J 7
U6J PA4 P1 P 0 1 N N N N N N 15.024 8.592 14.347 1.224 3.290 -0.847 PA4 U6J 8
U6J O34 O2 O 0 1 N N N N N N 16.497 8.985 14.284 2.323 2.417 -1.637 O34 U6J 9
U6J O44 O3 O 0 1 N N N N N N 14.173 9.004 15.570 1.965 4.409 0.042 O44 U6J 10
U6J O14 O4 O 0 1 N N N N N N 14.964 6.938 14.303 0.362 2.326 0.112 O14 U6J 11
U6J O13 O5 O 0 1 N N N N N N 16.673 6.124 12.206 -2.364 2.825 -0.432 O13 U6J 12
U6J PA3 P2 P 0 1 N N N N N N 15.629 6.307 11.016 -2.827 4.037 0.522 PA3 U6J 13
U6J O23 O6 O 0 1 N N N N N N 14.455 5.309 11.137 -3.372 5.253 -0.381 O23 U6J 14
U6J O33 O7 O 0 1 N N N N N N 16.549 6.079 9.775 -3.904 3.571 1.424 O33 U6J 15
U6J O43 O8 O 0 1 N N N N N N 15.057 7.776 11.121 -1.573 4.539 1.398 O43 U6J 16
U6J O12 O9 O 0 1 N N N N N N 18.668 5.116 13.589 -2.796 0.444 -1.889 O12 U6J 17
U6J O11 O10 O 0 1 N N N N N N 18.365 2.708 15.067 -3.237 -1.927 -0.420 O11 U6J 18
U6J PA1 P3 P 0 1 N N N N N N 18.129 1.049 15.208 -4.099 -2.891 0.540 PA1 U6J 19
U6J O21 O11 O 0 1 N N N N N N 17.221 0.725 16.557 -4.840 -4.010 -0.349 O21 U6J 20
U6J O31 O12 O 0 1 N N N N N N 17.304 0.583 13.970 -3.200 -3.550 1.513 O31 U6J 21
U6J O41 O13 O 0 1 N N N N N N 19.538 0.641 15.263 -5.198 -2.018 1.329 O41 U6J 22
U6J O16 O14 O 0 1 N N N N N N 17.040 3.660 17.206 -0.511 -2.427 0.124 O16 U6J 23
U6J PA6 P4 P 0 1 N N N N N N 18.176 3.470 18.358 -0.048 -3.638 -0.830 PA6 U6J 24
U6J O26 O15 O 0 1 N N N N N N 17.492 3.789 19.729 0.248 -4.943 0.065 O26 U6J 25
U6J O36 O16 O 0 1 N N N N N N 19.339 4.496 18.106 -1.123 -3.939 -1.801 O36 U6J 26
U6J O46 O17 O 0 1 N N N N N N 18.436 2.008 18.308 1.288 -3.217 -1.622 O46 U6J 27
U6J O15 O18 O 0 1 N N N N N N 15.545 6.065 16.963 1.312 -0.306 -0.273 O15 U6J 28
U6J PA5 P5 P 0 1 N N N N N N 14.104 5.912 17.539 2.533 -0.527 0.753 PA5 U6J 29
U6J O25 O19 O 0 1 N N N N N N 13.899 4.456 18.000 2.289 -1.879 1.593 O25 U6J 30
U6J O35 O20 O 0 1 N N N N N N 12.994 6.448 16.623 2.611 0.623 1.682 O35 U6J 31
U6J O45 O21 O 0 1 N N N N N N 14.330 6.701 18.878 3.911 -0.648 -0.070 O45 U6J 32
U6J PB5 P6 P 0 1 N N N N N N 14.207 8.355 19.189 5.467 -0.569 0.337 PB5 U6J 33
U6J O75 O22 O 0 1 N N N N N N 15.636 8.779 19.041 6.348 -0.246 -0.972 O75 U6J 34
U6J O55 O23 O 0 1 N N N N N N 13.096 8.878 18.179 5.661 0.503 1.339 O55 U6J 35
U6J O65 O24 O 0 1 N N N N N N 13.706 8.337 20.686 5.931 -1.978 0.962 O65 U6J 36
U6J H1 H1 H 0 1 N N N N N N 18.044 5.167 16.095 -0.907 -1.171 -1.468 H1 U6J 37
U6J H2 H2 H 0 1 N N N N N N 15.100 4.588 15.564 -0.067 -0.049 1.243 H2 U6J 38
U6J H3 H3 H 0 1 N N N N N N 17.030 6.807 14.733 -0.455 1.286 -1.475 H3 U6J 39
U6J H4 H4 H 0 1 N N N N N N 15.462 4.695 13.123 -1.968 1.570 1.161 H4 U6J 40
U6J H5 H5 H 0 1 N N N N N N 17.575 3.647 12.657 -3.869 0.646 -0.135 H5 U6J 41
U6J H6 H6 H 0 1 N N N N N N 16.367 3.008 14.706 -2.420 -0.887 1.167 H6 U6J 42
U6J H7 H7 H 0 1 N N N N N N 16.689 9.359 13.432 2.947 1.956 -1.060 H7 U6J 43
U6J H8 H8 H 0 1 N N N N N N 13.332 9.332 15.275 2.504 5.026 -0.472 H8 U6J 44
U6J H9 H9 H 0 1 N N N N N N 14.483 4.696 10.411 -3.668 6.020 0.129 H9 U6J 45
U6J H10 H10 H 0 1 N N N N N N 14.788 7.948 12.016 -0.828 4.859 0.871 H10 U6J 46
U6J H11 H11 H 0 1 N N N N N N 19.419 4.546 13.707 -3.354 -0.232 -2.296 H11 U6J 47
U6J H12 H12 H 0 1 N N N N N N 16.398 0.328 16.297 -5.379 -4.627 0.165 H12 U6J 48
U6J H13 H13 H 0 1 N N N N N N 19.749 0.125 14.494 -5.822 -1.557 0.752 H13 U6J 49
U6J H14 H14 H 0 1 N N N N N N 17.919 4.537 20.130 0.532 -5.714 -0.445 H14 U6J 50
U6J H15 H15 H 0 1 N N N N N N 19.353 1.856 18.113 2.036 -3.005 -1.047 H15 U6J 51
U6J H16 H16 H 0 1 N N N N N N 13.093 4.117 17.630 2.227 -2.675 1.048 H16 U6J 52
U6J H17 H17 H 0 1 N N N N N N 15.718 9.362 18.295 7.298 -0.184 -0.801 H17 U6J 53
U6J H18 H18 H 0 1 N N N N N N 12.809 8.648 20.724 5.831 -2.727 0.359 H18 U6J 54
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
U6J O33 PA3 DOUB N N 1
U6J PA3 O43 SING N N 2
U6J PA3 O23 SING N N 3
U6J PA3 O13 SING N N 4
U6J O13 C3 SING N N 5
U6J O24 PA4 DOUB N N 6
U6J C3 C2 SING N N 7
U6J C3 C4 SING N N 8
U6J C2 O12 SING N N 9
U6J C2 C1 SING N N 10
U6J O31 PA1 DOUB N N 11
U6J O34 PA4 SING N N 12
U6J O14 PA4 SING N N 13
U6J O14 C4 SING N N 14
U6J PA4 O44 SING N N 15
U6J C4 C5 SING N N 16
U6J C1 O11 SING N N 17
U6J C1 C6 SING N N 18
U6J O11 PA1 SING N N 19
U6J PA1 O41 SING N N 20
U6J PA1 O21 SING N N 21
U6J C5 C6 SING N N 22
U6J C5 O15 SING N N 23
U6J C6 O16 SING N N 24
U6J O35 PA5 DOUB N N 25
U6J O15 PA5 SING N N 26
U6J O16 PA6 SING N N 27
U6J PA5 O25 SING N N 28
U6J PA5 O45 SING N N 29
U6J O36 PA6 DOUB N N 30
U6J O55 PB5 DOUB N N 31
U6J O46 PA6 SING N N 32
U6J PA6 O26 SING N N 33
U6J O45 PB5 SING N N 34
U6J O75 PB5 SING N N 35
U6J PB5 O65 SING N N 36
U6J C6 H1 SING N N 37
U6J C5 H2 SING N N 38
U6J C4 H3 SING N N 39
U6J C3 H4 SING N N 40
U6J C2 H5 SING N N 41
U6J C1 H6 SING N N 42
U6J O34 H7 SING N N 43
U6J O44 H8 SING N N 44
U6J O23 H9 SING N N 45
U6J O43 H10 SING N N 46
U6J O12 H11 SING N N 47
U6J O21 H12 SING N N 48
U6J O41 H13 SING N N 49
U6J O26 H14 SING N N 50
U6J O46 H15 SING N N 51
U6J O25 H16 SING N N 52
U6J O75 H17 SING N N 53
U6J O65 H18 SING N N 54
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
U6J SMILES ACDLabs 12.01 C1(OP(O)(=O)O)C(OP(O)(OP(O)(O)=O)=O)C(C(C(O)C1OP(O)(O)=O)OP(O)(O)=O)OP(=O)(O)O
U6J InChI InChI 1.03 InChI=1S/C6H18O24P6/c7-1-2(25-31(8,9)10)4(27-33(14,15)16)6(29-36(23,24)30-35(20,21)22)5(28-34(17,18)19)3(1)26-32(11,12)13/h1-7H,(H,23,24)(H2,8,9,10)(H2,11,12,13)(H2,14,15,16)(H2,17,18,19)(H2,20,21,22)/t1-,2+,3-,4-,5+,6+
U6J InChIKey InChI 1.03 FFZGWHDHUIRNPY-KXXVROSKSA-N
U6J SMILES_CANONICAL CACTVS 3.385 O[C@@H]1[C@H](O[P](O)(O)=O)[C@@H](O[P](O)(O)=O)[C@H](O[P](O)(=O)O[P](O)(O)=O)[C@@H](O[P](O)(O)=O)[C@@H]1O[P](O)(O)=O
U6J SMILES CACTVS 3.385 O[CH]1[CH](O[P](O)(O)=O)[CH](O[P](O)(O)=O)[CH](O[P](O)(=O)O[P](O)(O)=O)[CH](O[P](O)(O)=O)[CH]1O[P](O)(O)=O
U6J SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[C@H]1([C@H](C([C@H]([C@@H](C1O)OP(=O)(O)O)OP(=O)(O)O)OP(=O)(O)OP(=O)(O)O)OP(=O)(O)O)OP(=O)(O)O"
U6J SMILES "OpenEye OEToolkits" 2.0.7 C1(C(C(C(C(C1OP(=O)(O)O)OP(=O)(O)O)OP(=O)(O)OP(=O)(O)O)OP(=O)(O)O)OP(=O)(O)O)O
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
U6J "SYSTEMATIC NAME" ACDLabs 12.01 "(1r,2R,3S,4r,5R,6S)-4-hydroxy-2,3,5,6-tetrakis(phosphonooxy)cyclohexyl trihydrogen diphosphate"
U6J "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[(2~{R},3~{S},5~{R},6~{S})-4-oxidanyl-2,3,5,6-tetraphosphonooxy-cyclohexyl] phosphono hydrogen phosphate"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
U6J 'Create component' 2020-04-28 RCSB
U6J 'Initial release' 2021-03-03 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
U6J C6 C -1.761 -0.852 1
U6J C5 C -0.298 -1.179 2
U6J C4 C 0.713 -0.074 3
U6J C3 C 0.269 1.356 4
U6J C2 C -1.195 1.683 5
U6J C1 C -2.206 0.579 6
U6J O24 O 4.379 1.728 7
U6J PA4 P 3.303 0.685 8
U6J O34 O 4.353 -0.386 9
U6J O44 O 2.286 1.751 10
U6J O14 O 2.218 -0.392 11
U6J O13 O 1.294 2.428 12
U6J PA3 P 0.908 3.851 13
U6J O23 O -0.489 3.457 14
U6J O33 O 0.499 5.295 15
U6J O43 O 2.350 4.253 16
U6J O12 O -1.651 3.147 17
U6J O11 O -3.662 0.878 18
U6J PA1 P -4.154 2.275 19
U6J O21 O -2.780 2.740 20
U6J O31 O -4.634 3.695 21
U6J O41 O -5.571 1.788 22
U6J O16 O -2.800 -1.985 23
U6J PA6 P -4.320 -1.707 24
U6J O26 O -4.081 -0.250 25
U6J O36 O -5.800 -1.448 26
U6J O46 O -4.588 -3.181 27
U6J O15 O 0.226 -2.713 28
U6J PA5 P 1.742 -2.873 29
U6J O25 O 1.712 -1.509 30
U6J O35 O 1.739 -4.382 31
U6J O45 O 3.288 -2.702 32
U6J PB5 P 4.384 -3.750 33
U6J O75 O 5.375 -2.613 34
U6J O55 O 5.542 -4.712 35
U6J O65 O 3.411 -4.880 36
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
U6J O33 PA3 DOUBLE NONE 1
U6J PA3 O43 SINGLE NONE 2
U6J PA3 O23 SINGLE NONE 3
U6J PA3 O13 SINGLE NONE 4
U6J C3 O13 SINGLE BEGINDASH 5
U6J O24 PA4 DOUBLE NONE 6
U6J C3 C2 SINGLE NONE 7
U6J C3 C4 SINGLE NONE 8
U6J C2 O12 SINGLE BEGINDASH 9
U6J C2 C1 SINGLE NONE 10
U6J O31 PA1 DOUBLE NONE 11
U6J O34 PA4 SINGLE NONE 12
U6J O14 PA4 SINGLE NONE 13
U6J C4 O14 SINGLE BEGINWEDGE 14
U6J PA4 O44 SINGLE NONE 15
U6J C4 C5 SINGLE NONE 16
U6J C1 O11 SINGLE BEGINDASH 17
U6J C1 C6 SINGLE NONE 18
U6J O11 PA1 SINGLE NONE 19
U6J PA1 O41 SINGLE NONE 20
U6J PA1 O21 SINGLE NONE 21
U6J C5 C6 SINGLE NONE 22
U6J C5 O15 SINGLE BEGINDASH 23
U6J C6 O16 SINGLE BEGINWEDGE 24
U6J O35 PA5 DOUBLE NONE 25
U6J O15 PA5 SINGLE NONE 26
U6J O16 PA6 SINGLE NONE 27
U6J PA5 O25 SINGLE BEGINDASH 28
U6J PA5 O45 SINGLE NONE 29
U6J O36 PA6 DOUBLE NONE 30
U6J O55 PB5 DOUBLE NONE 31
U6J O46 PA6 SINGLE NONE 32
U6J PA6 O26 SINGLE NONE 33
U6J O45 PB5 SINGLE NONE 34
U6J O75 PB5 SINGLE NONE 35
U6J PB5 O65 SINGLE NONE 36
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
U6J MurckoScaffold S1 scaffold C1CCCCC1 InChI=1S/C6H12/c1-2-4-6-5-3-1/h1-6H2 XDTMQSROBMDMFD-UHFFFAOYSA-N
U6J cyclohexane F1 fragment C1CCCCC1 InChI=1S/C6H12/c1-2-4-6-5-3-1/h1-6H2 XDTMQSROBMDMFD-UHFFFAOYSA-N
U6J phosphate F2 fragment O=P(O)(O)O InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4) NBIIXXVUZAFLBC-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
U6J C6 S1 1
U6J C5 S1 1
U6J C4 S1 1
U6J C3 S1 1
U6J C2 S1 1
U6J C1 S1 1
U6J C6 F1 1
U6J C1 F1 1
U6J C2 F1 1
U6J C3 F1 1
U6J C4 F1 1
U6J C5 F1 1
U6J O34 F2 1
U6J PA4 F2 1
U6J O24 F2 1
U6J O14 F2 1
U6J O44 F2 1
U6J O13 F2 2
U6J PA3 F2 2
U6J O33 F2 2
U6J O43 F2 2
U6J O23 F2 2
U6J O11 F2 3
U6J PA1 F2 3
U6J O31 F2 3
U6J O41 F2 3
U6J O21 F2 3
U6J O16 F2 4
U6J PA6 F2 4
U6J O36 F2 4
U6J O46 F2 4
U6J O26 F2 4
U6J O15 F2 5
U6J PA5 F2 5
U6J O35 F2 5
U6J O25 F2 5
U6J O45 F2 5
U6J O45 F2 6
U6J PB5 F2 6
U6J O55 F2 6
U6J O75 F2 6
U6J O65 F2 6
#
_pdbe_chem_comp_rdkit_properties.comp_id U6J
_pdbe_chem_comp_rdkit_properties.exactmw 659.861
_pdbe_chem_comp_rdkit_properties.amw 660.030
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 24
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 12
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 24
_pdbe_chem_comp_rdkit_properties.NumHBD 12
_pdbe_chem_comp_rdkit_properties.NumHBA 24
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 36
_pdbe_chem_comp_rdkit_properties.NumAtoms 54
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 30
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 1
_pdbe_chem_comp_rdkit_properties.NumRings 1
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 7
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 223.397
_pdbe_chem_comp_rdkit_properties.tpsa 400.560
_pdbe_chem_comp_rdkit_properties.CrippenClogP -3.133
_pdbe_chem_comp_rdkit_properties.CrippenMR 101.503
_pdbe_chem_comp_rdkit_properties.chi0v 20.848
_pdbe_chem_comp_rdkit_properties.chi1v 15.870
_pdbe_chem_comp_rdkit_properties.chi2v 6.084
_pdbe_chem_comp_rdkit_properties.chi3v 6.084
_pdbe_chem_comp_rdkit_properties.chi4v 4.792
_pdbe_chem_comp_rdkit_properties.chi0n 33.481
_pdbe_chem_comp_rdkit_properties.chi1n 15.006
_pdbe_chem_comp_rdkit_properties.chi2n 2.453
_pdbe_chem_comp_rdkit_properties.chi3n 2.453
_pdbe_chem_comp_rdkit_properties.chi4n 1.731
_pdbe_chem_comp_rdkit_properties.hallKierAlpha 0.660
_pdbe_chem_comp_rdkit_properties.kappa1 15.603
_pdbe_chem_comp_rdkit_properties.kappa2 11.642
_pdbe_chem_comp_rdkit_properties.kappa3 12.676
_pdbe_chem_comp_rdkit_properties.Phi 5.046
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
U6J UniChem PDBe U6J
U6J UniChem ChEBI 62928
U6J UniChem ZINC ZINC000087528195
U6J UniChem Nikkaji J2.723.602B
U6J UniChem BRENDA 213730
U6J UniChem BRENDA 232998
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
U6J C6 -0.377 1.088 -0.444 ETKDGv3 1
U6J C5 0.203 -0.339 -0.257 ETKDGv3 2
U6J C4 -0.635 -1.399 -1.013 ETKDGv3 3
U6J C3 -2.130 -1.335 -0.624 ETKDGv3 4
U6J C2 -2.691 0.094 -0.806 ETKDGv3 5
U6J C1 -1.869 1.152 -0.042 ETKDGv3 6
U6J O24 -0.058 -3.707 -3.044 ETKDGv3 7
U6J PA4 0.552 -2.324 -3.103 ETKDGv3 8
U6J O34 2.028 -2.321 -2.273 ETKDGv3 9
U6J O44 0.828 -1.906 -4.719 ETKDGv3 10
U6J O14 -0.523 -1.191 -2.412 ETKDGv3 11
U6J O13 -2.297 -1.737 0.727 ETKDGv3 12
U6J PA3 -2.932 -3.320 0.807 ETKDGv3 13
U6J O23 -2.003 -4.383 -0.129 ETKDGv3 14
U6J O33 -4.357 -3.322 0.301 ETKDGv3 15
U6J O43 -2.919 -3.838 2.418 ETKDGv3 16
U6J O12 -4.026 0.146 -0.372 ETKDGv3 17
U6J O11 -2.007 0.937 1.353 ETKDGv3 18
U6J PA1 -2.225 2.422 2.169 ETKDGv3 19
U6J O21 -1.043 3.540 1.697 ETKDGv3 20
U6J O31 -3.598 2.973 1.855 ETKDGv3 21
U6J O41 -2.101 2.150 3.834 ETKDGv3 22
U6J O16 -0.259 1.489 -1.799 ETKDGv3 23
U6J PA6 1.113 2.484 -2.017 ETKDGv3 24
U6J O26 1.035 3.825 -0.986 ETKDGv3 25
U6J O36 1.142 2.966 -3.449 ETKDGv3 26
U6J O46 2.527 1.608 -1.706 ETKDGv3 27
U6J O15 0.227 -0.677 1.120 ETKDGv3 28
U6J PA5 1.780 -0.413 1.784 ETKDGv3 29
U6J O25 2.778 -1.724 1.386 ETKDGv3 30
U6J O35 1.640 -0.342 3.287 ETKDGv3 31
U6J O45 2.419 1.059 1.210 ETKDGv3 32
U6J PB5 4.073 1.101 1.601 ETKDGv3 33
U6J O75 4.639 2.676 1.353 ETKDGv3 34
U6J O55 4.839 0.158 0.699 ETKDGv3 35
U6J O65 4.327 0.676 3.222 ETKDGv3 36
U6J H1 0.158 1.771 0.252 ETKDGv3 37
U6J H2 1.215 -0.366 -0.718 ETKDGv3 38
U6J H3 -0.269 -2.403 -0.693 ETKDGv3 39
U6J H4 -2.690 -1.978 -1.346 ETKDGv3 40
U6J H5 -2.658 0.353 -1.892 ETKDGv3 41
U6J H6 -2.268 2.142 -0.372 ETKDGv3 42
U6J H7 2.601 -2.954 -2.774 ETKDGv3 43
U6J H8 -0.076 -1.826 -5.116 ETKDGv3 44
U6J H9 -1.149 -4.473 0.364 ETKDGv3 45
U6J H10 -1.988 -3.691 2.722 ETKDGv3 46
U6J H11 -4.568 -0.341 -1.046 ETKDGv3 47
U6J H12 -1.253 4.363 2.207 ETKDGv3 48
U6J H13 -2.222 3.042 4.247 ETKDGv3 49
U6J H14 0.129 4.198 -1.126 ETKDGv3 50
U6J H15 3.245 2.289 -1.671 ETKDGv3 51
U6J H16 2.788 -1.752 0.397 ETKDGv3 52
U6J H17 5.600 2.642 1.590 ETKDGv3 53
U6J H18 5.309 0.716 3.345 ETKDGv3 54
#