data_U8O
#
_chem_comp.id U8O
_chem_comp.name "[1,2]thiazolo[5,4-b]pyridin-3-amine"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C6 H5 N3 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2023-01-30
_chem_comp.pdbx_modified_date 2024-02-02
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 151.189
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code U8O
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 8CCL
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
U8O C10 C1 C 0 1 Y N N N N N 13.982 -18.710 0.170 0.101 0.591 -0.002 C10 U8O 1
U8O C02 C2 C 0 1 Y N N N N N 15.074 -19.552 0.492 -1.334 0.829 -0.002 C02 U8O 2
U8O C05 C3 C 0 1 Y N N N N N 13.054 -19.306 -0.654 0.400 -0.785 0.000 C05 U8O 3
U8O C07 C4 C 0 1 Y N N N N N 11.734 -17.378 -0.682 2.666 -0.379 -0.002 C07 U8O 4
U8O C08 C5 C 0 1 Y N N N N N 12.637 -16.709 0.146 2.457 0.993 0.000 C08 U8O 5
U8O C09 C6 C 0 1 Y N N N N N 13.773 -17.370 0.584 1.185 1.494 0.001 C09 U8O 6
U8O N01 N1 N 0 1 N N N N N N 16.156 -19.094 1.349 -1.852 2.125 0.002 N01 U8O 7
U8O N03 N2 N 0 1 Y N N N N N 15.080 -20.772 -0.011 -2.110 -0.202 -0.005 N03 U8O 8
U8O N06 N3 N 0 1 Y N N N N N 11.957 -18.639 -1.060 1.651 -1.217 0.000 N06 U8O 9
U8O S04 S1 S 0 1 Y N N N N N 13.673 -20.929 -0.922 -1.164 -1.606 0.002 S04 U8O 10
U8O H1 H1 H 0 1 N N N N N N 10.844 -16.869 -1.021 3.675 -0.764 -0.003 H1 U8O 11
U8O H2 H2 H 0 1 N N N N N N 12.452 -15.687 0.442 3.301 1.666 0.001 H2 U8O 12
U8O H3 H3 H 0 1 N N N N N N 14.485 -16.875 1.228 1.013 2.560 0.005 H3 U8O 13
U8O H4 H4 H 0 1 N N N N N N 16.828 -19.827 1.459 -1.252 2.887 0.005 H4 U8O 14
U8O H5 H5 H 0 1 N N N N N N 16.596 -18.298 0.934 -2.812 2.263 0.002 H5 U8O 15
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
U8O N06 C07 DOUB Y N 1
U8O N06 C05 SING Y N 2
U8O S04 C05 SING Y N 3
U8O S04 N03 SING Y N 4
U8O C07 C08 SING Y N 5
U8O C05 C10 DOUB Y N 6
U8O N03 C02 DOUB Y N 7
U8O C08 C09 DOUB Y N 8
U8O C10 C02 SING Y N 9
U8O C10 C09 SING Y N 10
U8O C02 N01 SING N N 11
U8O C07 H1 SING N N 12
U8O C08 H2 SING N N 13
U8O C09 H3 SING N N 14
U8O N01 H4 SING N N 15
U8O N01 H5 SING N N 16
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
U8O InChI InChI 1.06 "InChI=1S/C6H5N3S/c7-5-4-2-1-3-8-6(4)10-9-5/h1-3H,(H2,7,9)"
U8O InChIKey InChI 1.06 NVOYVQKFZVOHPB-UHFFFAOYSA-N
U8O SMILES_CANONICAL CACTVS 3.385 Nc1nsc2ncccc12
U8O SMILES CACTVS 3.385 Nc1nsc2ncccc12
U8O SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2c(nsc2nc1)N"
U8O SMILES "OpenEye OEToolkits" 2.0.7 "c1cc2c(nsc2nc1)N"
#
_pdbx_chem_comp_identifier.comp_id U8O
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier "[1,2]thiazolo[5,4-b]pyridin-3-amine"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
U8O 'Create component' 2023-01-30 PDBE
U8O 'Initial release' 2024-02-07 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.09.6 'Core functionality.'
pdbeccdutils 0.8.6 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
U8O C10 C 5.598 -0.163 1
U8O C02 C 7.018 0.295 2
U8O C05 C 5.598 -1.663 3
U8O C07 C 3.000 -1.663 4
U8O C08 C 3.000 -0.163 5
U8O C09 C 4.299 0.587 6
U8O N01 N 7.483 1.720 7
U8O N03 N 7.893 -0.913 8
U8O N06 N 4.299 -2.413 9
U8O S04 S 7.018 -2.120 10
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
U8O N06 C07 DOUBLE NONE 1
U8O N06 C05 SINGLE NONE 2
U8O S04 C05 SINGLE NONE 3
U8O S04 N03 SINGLE NONE 4
U8O C07 C08 SINGLE NONE 5
U8O C05 C10 DOUBLE NONE 6
U8O N03 C02 DOUBLE NONE 7
U8O C08 C09 DOUBLE NONE 8
U8O C10 C02 SINGLE NONE 9
U8O C10 C09 SINGLE NONE 10
U8O C02 N01 SINGLE NONE 11
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
U8O MurckoScaffold S1 scaffold c1cnc2sncc2c1 InChI=1S/C6H4N2S/c1-2-5-4-8-9-6(5)7-3-1/h1-4H VTIVYUBSVCXRPI-UHFFFAOYSA-N
U8O pyridine F1 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
U8O C10 S1 1
U8O C02 S1 1
U8O C05 S1 1
U8O C07 S1 1
U8O C08 S1 1
U8O C09 S1 1
U8O N03 S1 1
U8O N06 S1 1
U8O S04 S1 1
U8O C05 F1 1
U8O C10 F1 1
U8O C09 F1 1
U8O C08 F1 1
U8O C07 F1 1
U8O N06 F1 1
#
_pdbe_chem_comp_rdkit_properties.comp_id U8O
_pdbe_chem_comp_rdkit_properties.exactmw 151.020
_pdbe_chem_comp_rdkit_properties.amw 151.194
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 3
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 1
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 4
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 10
_pdbe_chem_comp_rdkit_properties.NumAtoms 15
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 4
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 68.815
_pdbe_chem_comp_rdkit_properties.tpsa 51.800
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.464
_pdbe_chem_comp_rdkit_properties.CrippenMR 38.797
_pdbe_chem_comp_rdkit_properties.chi0v 5.566
_pdbe_chem_comp_rdkit_properties.chi1v 3.305
_pdbe_chem_comp_rdkit_properties.chi2v 1.789
_pdbe_chem_comp_rdkit_properties.chi3v 1.789
_pdbe_chem_comp_rdkit_properties.chi4v 1.213
_pdbe_chem_comp_rdkit_properties.chi0n 9.750
_pdbe_chem_comp_rdkit_properties.chi1n 4.926
_pdbe_chem_comp_rdkit_properties.chi2n 1.057
_pdbe_chem_comp_rdkit_properties.chi3n 1.057
_pdbe_chem_comp_rdkit_properties.chi4n 0.628
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.160
_pdbe_chem_comp_rdkit_properties.kappa1 2.467
_pdbe_chem_comp_rdkit_properties.kappa2 1.915
_pdbe_chem_comp_rdkit_properties.kappa3 0.657
_pdbe_chem_comp_rdkit_properties.Phi 0.472
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
U8O UniChem ZINC ZINC000072482101
U8O UniChem SureChEMBL SCHEMBL4158596
U8O UniChem PubChem 12955480
U8O UniChem 'EPA CompTox Dashboard' DTXSID80513865
U8O UniChem ChemicalBook CB82471505
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
U8O C10 0.199 0.271 -0.019 ETKDGv3 1
U8O C02 1.636 0.625 -0.233 ETKDGv3 2
U8O C05 -0.580 1.331 0.155 ETKDGv3 3
U8O C07 -2.553 0.052 0.411 ETKDGv3 4
U8O C08 -1.734 -1.177 0.223 ETKDGv3 5
U8O C09 -0.410 -1.074 0.016 ETKDGv3 6
U8O N01 2.655 -0.354 -0.441 ETKDGv3 7
U8O N03 1.922 1.898 -0.220 ETKDGv3 8
U8O N06 -1.993 1.231 0.376 ETKDGv3 9
U8O S04 0.416 2.772 0.062 ETKDGv3 10
U8O H1 -3.618 -0.031 0.578 ETKDGv3 11
U8O H2 -2.206 -2.150 0.253 ETKDGv3 12
U8O H3 0.189 -1.963 -0.121 ETKDGv3 13
U8O H4 2.431 -1.372 -0.453 ETKDGv3 14
U8O H5 3.645 -0.057 -0.586 ETKDGv3 15
#