data_UE0
#
_chem_comp.id UE0
_chem_comp.name "(3~{S})-1-ethanoyl-3-(4-methylphenyl)piperidine-3-carboxylic acid"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C15 H19 N O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2023-02-01
_chem_comp.pdbx_modified_date 2024-02-16
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 261.316
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code UE0
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 8CE3
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
UE0 C16 C1 C 0 1 Y N N N N N 0.841 8.600 -14.731 3.268 1.343 0.067 C16 UE0 1
UE0 C17 C2 C 0 1 Y N N N N N 0.626 7.959 -15.964 4.117 0.298 0.380 C17 UE0 2
UE0 C20 C3 C 0 1 N N N N N N -0.520 7.023 -16.176 5.593 0.552 0.550 C20 UE0 3
UE0 C15 C4 C 0 1 Y N N N N N 1.954 9.436 -14.535 1.914 1.110 -0.090 C15 UE0 4
UE0 C14 C5 C 0 1 Y N N N N N 2.862 9.683 -15.577 1.411 -0.169 0.061 C14 UE0 5
UE0 C9 C6 C 0 1 N N N N N N 0.902 14.180 -14.898 -4.661 0.619 0.552 C9 UE0 6
UE0 C8 C7 C 0 1 N N N N N N 1.836 13.157 -14.308 -3.206 1.000 0.646 C8 UE0 7
UE0 C4 C8 C 0 1 N N N N N N 3.268 13.311 -16.355 -2.653 -1.367 0.930 C4 UE0 8
UE0 C5 C9 C 0 1 N N N N N N 3.901 11.836 -14.495 -0.848 0.403 0.916 C5 UE0 9
UE0 C6 C10 C 0 1 N N N N N N 5.170 9.649 -14.832 -0.486 -0.026 -1.501 C6 UE0 10
UE0 C3 C11 C 0 1 N N N N N N 3.578 12.191 -17.363 -1.850 -2.173 -0.096 C3 UE0 11
UE0 C2 C12 C 0 1 N N N N N N 4.596 11.247 -16.735 -0.356 -1.909 0.109 C2 UE0 12
UE0 C1 C13 C 0 1 N N S N N N 4.089 10.609 -15.416 -0.065 -0.422 -0.109 C1 UE0 13
UE0 N7 N1 N 0 1 N N N N N N 2.914 12.782 -15.032 -2.270 0.047 0.824 N7 UE0 14
UE0 O10 O1 O 0 1 N N N N N N 1.613 12.696 -13.191 -2.878 2.164 0.560 O10 UE0 15
UE0 O11 O2 O 0 1 N N N N N N 5.358 9.580 -13.602 -0.325 1.240 -1.916 O11 UE0 16
UE0 O13 O3 O 0 1 N N N N N N 5.769 8.906 -15.631 -0.969 -0.849 -2.243 O13 UE0 17
UE0 C18 C14 C 0 1 Y N N N N N 1.551 8.167 -16.975 3.613 -0.980 0.536 C18 UE0 18
UE0 C19 C15 C 0 1 Y N N N N N 2.644 9.024 -16.793 2.261 -1.215 0.368 C19 UE0 19
UE0 H1 H1 H 0 1 N N N N N N 0.141 8.448 -13.923 3.661 2.342 -0.051 H1 UE0 20
UE0 H2 H2 H 0 1 N N N N N N -0.219 6.004 -15.891 5.801 0.793 1.592 H2 UE0 21
UE0 H3 H3 H 0 1 N N N N N N -1.372 7.341 -15.557 6.150 -0.341 0.265 H3 UE0 22
UE0 H4 H4 H 0 1 N N N N N N -0.812 7.036 -17.236 5.894 1.386 -0.083 H4 UE0 23
UE0 H5 H5 H 0 1 N N N N N N 2.113 9.894 -13.570 1.250 1.927 -0.330 H5 UE0 24
UE0 H6 H6 H 0 1 N N N N N N 0.087 14.386 -14.188 -5.264 1.516 0.409 H6 UE0 25
UE0 H7 H7 H 0 1 N N N N N N 1.456 15.109 -15.100 -4.807 -0.055 -0.292 H7 UE0 26
UE0 H8 H8 H 0 1 N N N N N N 0.481 13.793 -15.837 -4.966 0.120 1.472 H8 UE0 27
UE0 H9 H9 H 0 1 N N N N N N 4.156 13.953 -16.254 -3.718 -1.474 0.726 H9 UE0 28
UE0 H10 H10 H 0 1 N N N N N N 2.426 13.907 -16.735 -2.435 -1.731 1.934 H10 UE0 29
UE0 H11 H11 H 0 1 N N N N N N 3.561 11.490 -13.508 -0.480 0.184 1.919 H11 UE0 30
UE0 H12 H12 H 0 1 N N N N N N 4.867 12.352 -14.390 -0.720 1.465 0.705 H12 UE0 31
UE0 H13 H13 H 0 1 N N N N N N 3.993 12.625 -18.285 -2.053 -3.236 0.036 H13 UE0 32
UE0 H14 H14 H 0 1 N N N N N N 2.656 11.639 -17.600 -2.138 -1.870 -1.103 H14 UE0 33
UE0 H15 H15 H 0 1 N N N N N N 4.819 10.443 -17.452 -0.074 -2.189 1.124 H15 UE0 34
UE0 H16 H16 H 0 1 N N N N N N 5.515 11.813 -16.521 0.218 -2.500 -0.604 H16 UE0 35
UE0 H17 H17 H 0 1 N N N N N N 5.997 8.902 -13.416 -0.610 1.446 -2.817 H17 UE0 36
UE0 H18 H18 H 0 1 N N N N N N 1.427 7.659 -17.920 4.277 -1.797 0.776 H18 UE0 37
UE0 H19 H19 H 0 1 N N N N N N 3.334 9.180 -17.609 1.867 -2.213 0.490 H19 UE0 38
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
UE0 C3 C2 SING N N 1
UE0 C3 C4 SING N N 2
UE0 C18 C19 DOUB Y N 3
UE0 C18 C17 SING Y N 4
UE0 C19 C14 SING Y N 5
UE0 C2 C1 SING N N 6
UE0 C4 N7 SING N N 7
UE0 C20 C17 SING N N 8
UE0 C17 C16 DOUB Y N 9
UE0 O13 C6 DOUB N N 10
UE0 C14 C1 SING N N 11
UE0 C14 C15 DOUB Y N 12
UE0 C1 C6 SING N N 13
UE0 C1 C5 SING N N 14
UE0 N7 C5 SING N N 15
UE0 N7 C8 SING N N 16
UE0 C9 C8 SING N N 17
UE0 C6 O11 SING N N 18
UE0 C16 C15 SING Y N 19
UE0 C8 O10 DOUB N N 20
UE0 C16 H1 SING N N 21
UE0 C20 H2 SING N N 22
UE0 C20 H3 SING N N 23
UE0 C20 H4 SING N N 24
UE0 C15 H5 SING N N 25
UE0 C9 H6 SING N N 26
UE0 C9 H7 SING N N 27
UE0 C9 H8 SING N N 28
UE0 C4 H9 SING N N 29
UE0 C4 H10 SING N N 30
UE0 C5 H11 SING N N 31
UE0 C5 H12 SING N N 32
UE0 C3 H13 SING N N 33
UE0 C3 H14 SING N N 34
UE0 C2 H15 SING N N 35
UE0 C2 H16 SING N N 36
UE0 O11 H17 SING N N 37
UE0 C18 H18 SING N N 38
UE0 C19 H19 SING N N 39
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
UE0 InChI InChI 1.06 "InChI=1S/C15H19NO3/c1-11-4-6-13(7-5-11)15(14(18)19)8-3-9-16(10-15)12(2)17/h4-7H,3,8-10H2,1-2H3,(H,18,19)/t15-/m1/s1"
UE0 InChIKey InChI 1.06 FZGIXDHLUQHJKF-OAHLLOKOSA-N
UE0 SMILES_CANONICAL CACTVS 3.385 "CC(=O)N1CCC[C@](C1)(C(O)=O)c2ccc(C)cc2"
UE0 SMILES CACTVS 3.385 "CC(=O)N1CCC[C](C1)(C(O)=O)c2ccc(C)cc2"
UE0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccc(cc1)[C@]2(CCCN(C2)C(=O)C)C(=O)O"
UE0 SMILES "OpenEye OEToolkits" 2.0.7 "Cc1ccc(cc1)C2(CCCN(C2)C(=O)C)C(=O)O"
#
_pdbx_chem_comp_identifier.comp_id UE0
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier "(3~{S})-1-ethanoyl-3-(4-methylphenyl)piperidine-3-carboxylic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
UE0 'Create component' 2023-02-01 PDBE
UE0 'Initial release' 2024-02-21 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
UE0 C16 C 9.423 1.737 1
UE0 C17 C 9.162 3.214 2
UE0 C20 C 10.311 4.178 3
UE0 C15 C 8.274 0.773 4
UE0 C14 C 6.864 1.286 5
UE0 C9 C 9.612 -1.928 6
UE0 C8 C 8.313 -2.678 7
UE0 C4 C 5.715 -2.678 8
UE0 C5 C 7.014 -0.428 9
UE0 C6 C 4.965 1.621 10
UE0 C3 C 4.416 -1.928 11
UE0 C2 C 4.416 -0.428 12
UE0 C1 C 5.715 0.322 13
UE0 N7 N 7.014 -1.928 14
UE0 O10 O 8.313 -4.178 15
UE0 O11 O 3.465 1.621 16
UE0 O13 O 5.225 3.098 17
UE0 C18 C 7.753 3.727 18
UE0 C19 C 6.604 2.763 19
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
UE0 C3 C2 SINGLE NONE 1
UE0 C3 C4 SINGLE NONE 2
UE0 C18 C19 DOUBLE NONE 3
UE0 C18 C17 SINGLE NONE 4
UE0 C19 C14 SINGLE NONE 5
UE0 C2 C1 SINGLE NONE 6
UE0 C4 N7 SINGLE NONE 7
UE0 C20 C17 SINGLE NONE 8
UE0 C17 C16 DOUBLE NONE 9
UE0 O13 C6 DOUBLE NONE 10
UE0 C14 C1 SINGLE NONE 11
UE0 C14 C15 DOUBLE NONE 12
UE0 C1 C6 SINGLE BEGINWEDGE 13
UE0 C1 C5 SINGLE NONE 14
UE0 N7 C5 SINGLE NONE 15
UE0 N7 C8 SINGLE NONE 16
UE0 C9 C8 SINGLE NONE 17
UE0 C6 O11 SINGLE NONE 18
UE0 C16 C15 SINGLE NONE 19
UE0 C8 O10 DOUBLE NONE 20
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
UE0 MurckoScaffold S1 scaffold c1ccc(C2CCCNC2)cc1 InChI=1S/C11H15N/c1-2-5-10(6-3-1)11-7-4-8-12-9-11/h1-3,5-6,11-12H,4,7-9H2 NZYBILDYPCVNMU-UHFFFAOYSA-N
UE0 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
UE0 phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
UE0 C16 S1 1
UE0 C17 S1 1
UE0 C15 S1 1
UE0 C14 S1 1
UE0 C4 S1 1
UE0 C5 S1 1
UE0 C3 S1 1
UE0 C2 S1 1
UE0 C1 S1 1
UE0 N7 S1 1
UE0 C18 S1 1
UE0 C19 S1 1
UE0 N7 F1 1
UE0 C8 F1 1
UE0 O10 F1 1
UE0 C9 F1 1
UE0 C16 F2 1
UE0 C17 F2 1
UE0 C18 F2 1
UE0 C19 F2 1
UE0 C14 F2 1
UE0 C15 F2 1
#
_pdbe_chem_comp_rdkit_properties.comp_id UE0
_pdbe_chem_comp_rdkit_properties.exactmw 261.136
_pdbe_chem_comp_rdkit_properties.amw 261.321
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 4
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 4
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 3
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 19
_pdbe_chem_comp_rdkit_properties.NumAtoms 38
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 4
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.467
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 139.368
_pdbe_chem_comp_rdkit_properties.tpsa 57.610
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.850
_pdbe_chem_comp_rdkit_properties.CrippenMR 71.449
_pdbe_chem_comp_rdkit_properties.chi0v 9.172
_pdbe_chem_comp_rdkit_properties.chi1v 4.783
_pdbe_chem_comp_rdkit_properties.chi2v 2.206
_pdbe_chem_comp_rdkit_properties.chi3v 2.206
_pdbe_chem_comp_rdkit_properties.chi4v 1.320
_pdbe_chem_comp_rdkit_properties.chi0n 28.172
_pdbe_chem_comp_rdkit_properties.chi1n 14.191
_pdbe_chem_comp_rdkit_properties.chi2n 2.206
_pdbe_chem_comp_rdkit_properties.chi3n 2.206
_pdbe_chem_comp_rdkit_properties.chi4n 1.320
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.840
_pdbe_chem_comp_rdkit_properties.kappa1 3.245
_pdbe_chem_comp_rdkit_properties.kappa2 5.035
_pdbe_chem_comp_rdkit_properties.kappa3 2.478
_pdbe_chem_comp_rdkit_properties.Phi 0.860
#
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
UE0 C16 3.376 0.013 1.653 ETKDGv3 1
UE0 C17 4.117 0.202 0.551 ETKDGv3 2
UE0 C20 5.597 0.419 0.658 ETKDGv3 3
UE0 C15 1.923 -0.237 1.546 ETKDGv3 4
UE0 C14 1.315 -0.302 0.338 ETKDGv3 5
UE0 C9 -4.409 1.789 -1.482 ETKDGv3 6
UE0 C8 -2.964 1.856 -1.083 ETKDGv3 7
UE0 C4 -3.053 -0.425 0.024 ETKDGv3 8
UE0 C5 -0.817 0.734 -0.472 ETKDGv3 9
UE0 C6 -0.352 -1.756 -0.750 ETKDGv3 10
UE0 C3 -2.457 -1.041 1.303 ETKDGv3 11
UE0 C2 -0.949 -0.796 1.489 ETKDGv3 12
UE0 C1 -0.195 -0.544 0.156 ETKDGv3 13
UE0 N7 -2.292 0.743 -0.452 ETKDGv3 14
UE0 O10 -2.333 2.926 -1.303 ETKDGv3 15
UE0 O11 -0.727 -1.607 -2.084 ETKDGv3 16
UE0 O13 -0.094 -2.909 -0.308 ETKDGv3 17
UE0 C18 3.473 0.124 -0.777 ETKDGv3 18
UE0 C19 2.159 -0.108 -0.878 ETKDGv3 19
UE0 H1 3.832 0.041 2.635 ETKDGv3 20
UE0 H2 6.105 -0.558 0.796 ETKDGv3 21
UE0 H3 5.990 0.902 -0.262 ETKDGv3 22
UE0 H4 5.833 1.079 1.520 ETKDGv3 23
UE0 H5 1.384 -0.363 2.472 ETKDGv3 24
UE0 H6 -4.653 2.610 -2.190 ETKDGv3 25
UE0 H7 -5.051 1.896 -0.583 ETKDGv3 26
UE0 H8 -4.622 0.823 -1.985 ETKDGv3 27
UE0 H9 -4.105 -0.152 0.248 ETKDGv3 28
UE0 H10 -3.082 -1.187 -0.783 ETKDGv3 29
UE0 H11 -0.463 0.866 -1.518 ETKDGv3 30
UE0 H12 -0.460 1.619 0.102 ETKDGv3 31
UE0 H13 -2.993 -0.636 2.189 ETKDGv3 32
UE0 H14 -2.650 -2.136 1.286 ETKDGv3 33
UE0 H15 -0.833 0.096 2.146 ETKDGv3 34
UE0 H16 -0.512 -1.665 2.028 ETKDGv3 35
UE0 H17 -0.816 -2.412 -2.692 ETKDGv3 36
UE0 H18 4.063 0.255 -1.676 ETKDGv3 37
UE0 H19 1.713 -0.160 -1.863 ETKDGv3 38
#