data_UEG
#
_chem_comp.id UEG
_chem_comp.name '4,5-bis(hydroxymethyl)-2-methyl-pyridin-3-ol'
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula 'C8 H11 N O3'
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2013-09-12
_chem_comp.pdbx_modified_date 2024-09-27
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 169.178
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code UEG
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4C5L
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
_chem_comp.pdbx_pcm Y
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
UEG OP4 OP4 O 0 1 N N N N N N -14.392 -8.435 -62.852 3.150 1.453 -0.013 OP4 UEG 1
UEG C5A C5A C 0 1 N N N N N N -15.515 -7.543 -62.990 2.469 0.208 -0.177 C5A UEG 2
UEG C5 C5 C 0 1 Y N N N N N -15.455 -6.282 -62.143 0.982 0.433 -0.092 C5 UEG 3
UEG C6 C6 C 0 1 Y N N N N N -16.704 -5.671 -61.900 0.478 1.704 0.117 C6 UEG 4
UEG N1 N1 N 0 1 Y N N N N N -16.805 -4.553 -61.156 -0.822 1.912 0.193 N1 UEG 5
UEG C2 C2 C 0 1 Y N N N N N -15.664 -3.975 -60.643 -1.691 0.928 0.075 C2 UEG 6
UEG C3 C3 C 0 1 Y N N N N N -14.429 -4.537 -60.877 -1.262 -0.374 -0.136 C3 UEG 7
UEG C4 C4 C 0 1 Y N N N N N -14.295 -5.652 -61.652 0.103 -0.629 -0.227 C4 UEG 8
UEG C4A C4A C 0 1 N N N N N N -12.899 -6.149 -61.627 0.613 -2.028 -0.462 C4A UEG 9
UEG O4A O4A O 0 1 N N N N N N -12.756 -7.363 -61.526 0.818 -2.676 0.795 O4A UEG 10
UEG O3 O3 O 0 1 N N N N N N -13.283 -3.974 -60.388 -2.162 -1.385 -0.257 O3 UEG 11
UEG C2A C2A C 0 1 N N N N N N -15.741 -2.702 -59.842 -3.166 1.221 0.170 C2A UEG 12
UEG HP4 HP4 H 0 1 N N N N N N -14.516 -9.190 -63.415 4.114 1.383 -0.057 HP4 UEG 13
UEG H5A H5A H 0 1 N N N N N N -15.580 -7.240 -64.045 2.717 -0.216 -1.151 H5A UEG 14
UEG H5B H5B H 0 1 N N N N N N -16.424 -8.096 -62.711 2.778 -0.481 0.609 H5B UEG 15
UEG H6 H6 H 0 1 N N N N N N -17.597 -6.109 -62.320 1.158 2.536 0.220 H6 UEG 16
UEG H2A H2A H 0 1 N N N N N N -16.789 -2.377 -59.768 -3.557 1.445 -0.823 H2A UEG 17
UEG H2B H2B H 0 1 N N N N N N -15.340 -2.879 -58.833 -3.684 0.352 0.576 H2B UEG 18
UEG H2C H2C H 0 1 N N N N N N -15.149 -1.920 -60.339 -3.325 2.078 0.824 H2C UEG 19
UEG H3 H3 H 0 1 N N N N N N -12.535 -4.498 -60.650 -2.453 -1.547 -1.164 H3 UEG 20
UEG H4A H4A H 0 1 N N N N N N -12.413 -5.831 -62.561 -0.119 -2.588 -1.044 H4A UEG 21
UEG H4B H4B H 0 1 N N N N N N -12.391 -5.679 -60.772 1.555 -1.984 -1.007 H4B UEG 22
UEG H5 H5 H 0 1 N N N N N N -11.830 -7.574 -61.519 1.147 -3.583 0.720 H5 UEG 23
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
UEG OP4 C5A SING N N 1
UEG C5A C5 SING N N 2
UEG C5 C6 SING Y N 3
UEG C5 C4 DOUB Y N 4
UEG C6 N1 DOUB Y N 5
UEG N1 C2 SING Y N 6
UEG C2 C3 DOUB Y N 7
UEG C2 C2A SING N N 8
UEG C3 C4 SING Y N 9
UEG C3 O3 SING N N 10
UEG C4 C4A SING N N 11
UEG C4A O4A SING N N 12
UEG C4A H4A SING N N 13
UEG C4A H4B SING N N 14
UEG OP4 HP4 SING N N 15
UEG C5A H5A SING N N 16
UEG C5A H5B SING N N 17
UEG C6 H6 SING N N 18
UEG C2A H2A SING N N 19
UEG C2A H2B SING N N 20
UEG C2A H2C SING N N 21
UEG O3 H3 SING N N 22
UEG O4A H5 SING N N 23
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
UEG SMILES ACDLabs 12.01 'Oc1c(c(cnc1C)CO)CO'
UEG InChI InChI 1.03 'InChI=1S/C8H11NO3/c1-5-8(12)7(4-11)6(3-10)2-9-5/h2,10-12H,3-4H2,1H3'
UEG InChIKey InChI 1.03 LXNHXLLTXMVWPM-UHFFFAOYSA-N
UEG SMILES_CANONICAL CACTVS 3.385 'Cc1ncc(CO)c(CO)c1O'
UEG SMILES CACTVS 3.385 'Cc1ncc(CO)c(CO)c1O'
UEG SMILES_CANONICAL 'OpenEye OEToolkits' 1.9.2 'Cc1c(c(c(cn1)CO)CO)O'
UEG SMILES 'OpenEye OEToolkits' 1.9.2 'Cc1c(c(c(cn1)CO)CO)O'
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
UEG 'SYSTEMATIC NAME' ACDLabs 12.01 '4,5-bis(hydroxymethyl)-2-methylpyridin-3-ol'
UEG 'SYSTEMATIC NAME' 'OpenEye OEToolkits' 1.9.2 '4,5-bis(hydroxymethyl)-2-methyl-pyridin-3-ol'
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
UEG 'Create component' 2013-09-12 EBI
UEG 'Initial release' 2014-03-19 RCSB
UEG 'Modify descriptor' 2014-09-05 RCSB
UEG 'Modify PCM' 2024-09-27 PDBE
#
_pdbx_chem_comp_pcm.pcm_id 1
_pdbx_chem_comp_pcm.comp_id UEG
_pdbx_chem_comp_pcm.modified_residue_id CYS
_pdbx_chem_comp_pcm.type None
_pdbx_chem_comp_pcm.category 'Covalent chemical modification'
_pdbx_chem_comp_pcm.position 'Amino-acid side chain'
_pdbx_chem_comp_pcm.polypeptide_position 'Any position'
_pdbx_chem_comp_pcm.comp_id_linking_atom C4A
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ?
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ?
_pdbx_chem_comp_pcm.first_instance_model_db_code 4C5L
#
_pdbe_chem_comp_drugbank_details.comp_id UEG
_pdbe_chem_comp_drugbank_details.drugbank_id DB00165
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name Pyridoxine
_pdbe_chem_comp_drugbank_details.description
"Pyridoxine is the 4-methanol form of vitamin B6, an important water-soluble vitamin that is naturally present in many foods. As its classification as a vitamin implies, Vitamin B6 (and pyridoxine) are essential nutrients required for normal functioning of many biological systems within the body. While many plants and microorganisms are able to synthesize pyridoxine through endogenous biological processes, animals must obtain it through their diet.   More specifically, pyridoxine is converted to pyridoxal 5-phosphate in the body, which is an important coenzyme for synthesis of amino acids, neurotransmitters (serotonin, norepinephrine), sphingolipids, and aminolevulinic acid. It's important to note that Vitamin B6 is the collective term for a group of three related compounds, pyridoxine, pyridoxal, and pyridoxamine, and their phosphorylated derivatives, pyridoxine 5'-phosphate, pyridoxal 5'-phosphate and pyridoxamine 5'-phosphate. Although all six of these compounds should technically be referred to as vitamin B6, the term vitamin B6 is commonly used interchangeably with just one of them, pyridoxine [A32836].   Vitamin B6, principally in its biologically active coenzyme form pyridoxal 5'-phosphate, is involved in a wide range of biochemical reactions, including the metabolism of amino acids and glycogen, the synthesis of nucleic acids, hemogloblin, sphingomyelin and other sphingolipids, and the synthesis of the neurotransmitters serotonin, dopamine, norepinephrine and gamma-aminobutyric acid (GABA) [A32837].   Pyridoxine is used medically for the treatment of vitamin B6 deficiency and for the prophylaxis of isoniazid-induced peripheral neuropathy (due to [DB00951]'s mechanism of action which competitively inhibits the action of pyridoxine in the above-mentioned metabolic functions). It is also used in combination with [DB00366] (as the commercially available product Diclectin) for the treatment of nausea and vomiting in pregnancy."
_pdbe_chem_comp_drugbank_details.cas_number 65-23-6
_pdbe_chem_comp_drugbank_details.mechanism_of_action
"Vitamin B6 is the collective term for a group of three related compounds, pyridoxine (PN), pyridoxal (PL) and pyridoxamine (PM), and their phosphorylated derivatives, pyridoxine 5'-phosphate (PNP), pyridoxal 5'-phosphate (PLP) and pyridoxamine 5'-phosphate (PMP). Although all six of these compounds should technically be referred to as vitamin B6, the term vitamin B6 is commonly used interchangeably with just one of them, pyridoxine. Vitamin B6, principally in its biologically active coenzyme form pyridoxal 5'-phosphate, is involved in a wide range of biochemical reactions, including the metabolism of amino acids and glycogen, the synthesis of nucleic acids, hemogloblin, sphingomyelin and other sphingolipids, and the synthesis of the neurotransmitters serotonin, dopamine, norepinephrine and gamma-aminobutyric acid (GABA)."
#
loop_
_pdbe_chem_comp_synonyms.comp_id
_pdbe_chem_comp_synonyms.name
_pdbe_chem_comp_synonyms.provenance
_pdbe_chem_comp_synonyms.type
UEG Pyridoxine ChEMBL 'International Nonproprietary Name'
UEG 2-methyl-3-hydroxy-4,5-dihydroxymethylpyridine DrugBank ?
UEG 3-hydroxy-4,5-bis(hydroxymethyl)-2-methylpyridine DrugBank ?
UEG '3-hydroxy-4,5-dimethylol-α-picoline' DrugBank ?
UEG 5-hydroxy-6-methyl-3,4-pyridinedimethanol DrugBank ?
UEG Pyridoxine DrugBank ?
UEG Pyridoxinum DrugBank ?
UEG Pyridoxol DrugBank ?
UEG 'Vitamin B6' DrugBank ?
UEG Becilan DrugBank 'International brand'
UEG Beesix DrugBank 'International brand'
UEG Benadon DrugBank 'International brand'
UEG Bonasanit DrugBank 'International brand'
UEG Hexa-Betalin DrugBank 'International brand'
UEG Hexobion DrugBank 'International brand'
UEG Nestrex DrugBank 'International brand'
#
_pdbe_chem_comp_drugbank_classification.comp_id UEG
_pdbe_chem_comp_drugbank_classification.drugbank_id DB00165
_pdbe_chem_comp_drugbank_classification.parent Pyridoxines
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Pyridines and derivatives'
_pdbe_chem_comp_drugbank_classification.superclass 'Organoheterocyclic compounds'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as pyridoxines. These are pyridoxal derivatives in which the carbaldehyde group at position 2 of the pyridoxal moiety is replaced by a hydroxymethyl group.'
#
_pdbe_chem_comp_drugbank_targets.comp_id UEG
_pdbe_chem_comp_drugbank_targets.drugbank_id DB00165
_pdbe_chem_comp_drugbank_targets.name 'Pyridoxal kinase'
_pdbe_chem_comp_drugbank_targets.organism Humans
_pdbe_chem_comp_drugbank_targets.uniprot_id O00764
_pdbe_chem_comp_drugbank_targets.pharmacologically_active yes
_pdbe_chem_comp_drugbank_targets.ordinal 1
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
UEG OP4 O 10.301 -0.840 1
UEG C5A C 9.002 -0.090 2
UEG C5 C 7.702 -0.840 3
UEG C6 C 7.702 -2.340 4
UEG N1 N 6.404 -3.090 5
UEG C2 C 5.104 -2.340 6
UEG C3 C 5.104 -0.840 7
UEG C4 C 6.404 -0.090 8
UEG C4A C 6.404 1.410 9
UEG O4A O 7.702 2.160 10
UEG O3 O 3.805 -0.090 11
UEG C2A C 3.805 -3.090 12
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
UEG OP4 C5A SINGLE NONE 1
UEG C5A C5 SINGLE NONE 2
UEG C5 C6 DOUBLE NONE 3
UEG C5 C4 SINGLE NONE 4
UEG C6 N1 SINGLE NONE 5
UEG N1 C2 DOUBLE NONE 6
UEG C2 C3 SINGLE NONE 7
UEG C2 C2A SINGLE NONE 8
UEG C3 C4 DOUBLE NONE 9
UEG C3 O3 SINGLE NONE 10
UEG C4 C4A SINGLE NONE 11
UEG C4A O4A SINGLE NONE 12
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
UEG MurckoScaffold S1 scaffold c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
UEG pyridine F1 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
UEG C5 S1 1
UEG C6 S1 1
UEG N1 S1 1
UEG C2 S1 1
UEG C3 S1 1
UEG C4 S1 1
UEG C6 F1 1
UEG C5 F1 1
UEG C4 F1 1
UEG C3 F1 1
UEG C2 F1 1
UEG N1 F1 1
#
_pdbe_chem_comp_rdkit_properties.comp_id UEG
_pdbe_chem_comp_rdkit_properties.exactmw 169.074
_pdbe_chem_comp_rdkit_properties.amw 169.180
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 4
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 6
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 4
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 12
_pdbe_chem_comp_rdkit_properties.NumAtoms 23
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 4
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.375
_pdbe_chem_comp_rdkit_properties.NumRings 1
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 85.843
_pdbe_chem_comp_rdkit_properties.tpsa 73.580
_pdbe_chem_comp_rdkit_properties.CrippenClogP -0.546
_pdbe_chem_comp_rdkit_properties.CrippenMR 41.076
_pdbe_chem_comp_rdkit_properties.chi0v 5.672
_pdbe_chem_comp_rdkit_properties.chi1v 2.810
_pdbe_chem_comp_rdkit_properties.chi2v 1.176
_pdbe_chem_comp_rdkit_properties.chi3v 1.176
_pdbe_chem_comp_rdkit_properties.chi4v 0.622
_pdbe_chem_comp_rdkit_properties.chi0n 16.672
_pdbe_chem_comp_rdkit_properties.chi1n 8.034
_pdbe_chem_comp_rdkit_properties.chi2n 1.176
_pdbe_chem_comp_rdkit_properties.chi3n 1.176
_pdbe_chem_comp_rdkit_properties.chi4n 0.622
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.130
_pdbe_chem_comp_rdkit_properties.kappa1 2.214
_pdbe_chem_comp_rdkit_properties.kappa2 3.512
_pdbe_chem_comp_rdkit_properties.kappa3 1.391
_pdbe_chem_comp_rdkit_properties.Phi 0.648
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
UEG UniChem ChEMBL CHEMBL1364
UEG UniChem DrugBank DB00165
UEG UniChem PDBe UEG
UEG UniChem 'KEGG LIGAND' C00314
UEG UniChem ChEBI 16709
UEG UniChem ZINC ZINC000000049154
UEG UniChem PharmGKB PA451897
UEG UniChem HMDB HMDB0000239
UEG UniChem LINCS LSM-5324
UEG UniChem ACTor 65-23-6
UEG UniChem Recon pydxn
UEG UniChem BindingDb 50103505
UEG UniChem DrugCentral 2836
UEG UniChem MetaboLights MTBLC16709
UEG UniChem BRENDA 103564
UEG UniChem BRENDA 104948
UEG UniChem BRENDA 1051
UEG UniChem Rhea 16709
UEG UniChem ChemicalBook CB0197939
UEG UniChem ChemicalBook CB8197940
UEG UniChem DailyMed PYRIDOXINE
UEG UniChem ClinicalTrials HEXA-BETALIN
UEG UniChem ClinicalTrials PYRIDOXINE
UEG UniChem ClinicalTrials 'PYRIDOXINE HYDROCHLORIDE'
UEG UniChem rxnorm PYRIDOXINE
UEG UniChem rxnorm 'PYRIDOXINE HYDROCHLORIDE'
UEG UniChem rxnorm 'VITAMIN B6'
UEG UniChem MedChemExpress HY-B1328
UEG UniChem 'Probes And Drugs' PD010192
UEG UniChem BRENDA 20816
UEG UniChem eMolecules 593675
UEG UniChem fdasrs KV2JZ1BI6Z
UEG UniChem SureChEMBL SCHEMBL3506
UEG UniChem 'PubChem TPHARMA' 15171158
UEG UniChem PubChem 1054
UEG UniChem Mcule MCULE-7725975962
UEG UniChem NMRShiftDB 10018151
UEG UniChem Nikkaji J2.095.349G
UEG UniChem Nikkaji J2.356F
UEG UniChem 'EPA CompTox Dashboard' DTXSID4023541
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
UEG OP4 3.209 -0.991 0.186 ETKDGv3 1
UEG C5A 2.346 -0.919 -0.916 ETKDGv3 2
UEG C5 0.917 -0.776 -0.450 ETKDGv3 3
UEG C6 0.127 -1.860 -0.410 ETKDGv3 4
UEG N1 -1.233 -1.756 0.032 ETKDGv3 5
UEG C2 -1.754 -0.627 0.414 ETKDGv3 6
UEG C3 -0.924 0.609 0.406 ETKDGv3 7
UEG C4 0.369 0.536 0.019 ETKDGv3 8
UEG C4A 1.228 1.782 -0.006 ETKDGv3 9
UEG O4A 1.227 2.343 -1.289 ETKDGv3 10
UEG O3 -1.470 1.836 0.794 ETKDGv3 11
UEG C2A -3.185 -0.600 0.857 ETKDGv3 12
UEG HP4 3.103 -1.901 0.569 ETKDGv3 13
UEG H5A 2.475 -1.816 -1.564 ETKDGv3 14
UEG H5B 2.630 -0.047 -1.541 ETKDGv3 15
UEG H6 0.500 -2.829 -0.717 ETKDGv3 16
UEG H2A -3.633 -1.616 0.807 ETKDGv3 17
UEG H2B -3.247 -0.240 1.905 ETKDGv3 18
UEG H2C -3.769 0.074 0.196 ETKDGv3 19
UEG H3 -2.432 1.937 1.088 ETKDGv3 20
UEG H4A 2.272 1.532 0.275 ETKDGv3 21
UEG H4B 0.893 2.532 0.745 ETKDGv3 22
UEG H5 0.351 2.798 -1.398 ETKDGv3 23
#