data_UFP
#
_chem_comp.id UFP
_chem_comp.name "5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE"
_chem_comp.type "DNA LINKING"
_chem_comp.pdbx_type ATOMN
_chem_comp.formula "C9 H12 F N2 O8 P"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 326.172
_chem_comp.one_letter_code N
_chem_comp.three_letter_code UFP
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1TSN
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
UFP N1 N1 N 0 1 N N N N N N 43.446 -15.246 39.904 0.363 0.246 2.234 N1 UFP 1
UFP C2 C2 C 0 1 N N N N N N 44.356 -14.798 38.984 -0.307 -0.920 2.249 C2 UFP 2
UFP N3 N3 N 0 1 N N N N N N 43.947 -14.428 37.710 -1.058 -1.273 3.308 N3 UFP 3
UFP C4 C4 C 0 1 N N N N N N 42.653 -14.508 37.220 -1.159 -0.453 4.374 C4 UFP 4
UFP C5 C5 C 0 1 N N N N N N 41.580 -15.446 38.040 -0.463 0.781 4.370 C5 UFP 5
UFP C6 C6 C 0 1 N N N N N N 41.942 -15.243 39.594 0.287 1.108 3.296 C6 UFP 6
UFP O2 O2 O 0 1 N N N N N N 45.555 -14.691 39.202 -0.226 -1.670 1.295 O2 UFP 7
UFP O4 O4 O 0 1 N N N N N N 42.326 -14.062 36.106 -1.843 -0.770 5.331 O4 UFP 8
UFP F5 F5 F 0 1 N N N N N N 40.310 -15.286 37.713 -0.549 1.619 5.427 F5 UFP 9
UFP "C1'" C1* C 0 1 N N R N N N 43.796 -15.776 41.210 1.177 0.600 1.068 "C1'" UFP 10
UFP "C2'" C2* C 0 1 N N N N N N 44.161 -14.662 42.155 2.285 -0.452 0.847 "C2'" UFP 11
UFP "C3'" C3* C 0 1 N N S N N N 43.829 -15.376 43.471 2.389 -0.571 -0.690 "C3'" UFP 12
UFP "C4'" C4* C 0 1 N N R N N N 42.563 -16.169 43.183 1.330 0.421 -1.218 "C4'" UFP 13
UFP "O3'" O3* O 0 1 N N N N N N 44.918 -16.205 43.839 3.694 -0.195 -1.134 "O3'" UFP 14
UFP "O4'" O4* O 0 1 N N N N N N 42.593 -16.450 41.742 0.380 0.556 -0.135 "O4'" UFP 15
UFP "C5'" C5* C 0 1 N N N N N N 41.228 -15.432 43.472 0.640 -0.136 -2.464 "C5'" UFP 16
UFP "O5'" O5* O 0 1 N N N N N N 41.112 -15.299 44.931 -0.381 0.767 -2.889 "O5'" UFP 17
UFP P P P 0 1 N N N N N N 40.682 -13.899 45.544 -1.061 0.120 -4.197 P UFP 18
UFP O1P O1P O 0 1 N N N N N N 39.396 -13.484 44.980 -1.636 -1.199 -3.853 O1P UFP 19
UFP O2P O2P O 0 1 N N N N N N 41.731 -12.895 45.391 -2.228 1.091 -4.731 O2P UFP 20
UFP O3P O3P O 0 1 N Y N N N N 40.662 -14.411 47.027 0.052 -0.062 -5.345 O3P UFP 21
UFP HN3 HN3 H 0 1 N N N N N N 44.660 -14.065 37.077 -1.531 -2.120 3.304 HN3 UFP 22
UFP H6 H6 H 0 1 N N N N N N 41.201 -15.109 40.400 0.825 2.044 3.275 H6 UFP 23
UFP "H1'" H1* H 0 1 N N N N N N 44.664 -16.469 41.115 1.614 1.590 1.198 "H1'" UFP 24
UFP "H2'1" 1H2* H 0 0 N N N N N N 45.190 -14.243 42.059 1.997 -1.408 1.285 "H2'1" UFP 25
UFP "H2'2" 2H2* H 0 0 N N N N N N 43.665 -13.678 41.982 3.229 -0.107 1.267 "H2'2" UFP 26
UFP "H3'" H3* H 0 1 N N N N N N 43.663 -14.680 44.326 2.154 -1.586 -1.011 "H3'" UFP 27
UFP "H4'" H4* H 0 1 N N N N N N 42.571 -17.059 43.853 1.792 1.384 -1.439 "H4'" UFP 28
UFP "HO3'" *HO3 H 0 0 N N N N N N 44.712 -16.647 44.654 4.313 -0.830 -0.750 "HO3'" UFP 29
UFP "H5'1" 1H5* H 0 0 N N N N N N 41.142 -14.457 42.936 1.373 -0.256 -3.262 "H5'1" UFP 30
UFP "H5'2" 2H5* H 0 0 N N N N N N 40.345 -15.929 43.007 0.196 -1.104 -2.231 "H5'2" UFP 31
UFP HOP2 2HOP H 0 0 N N N N N N 41.473 -12.057 45.757 -2.608 0.668 -5.513 HOP2 UFP 32
UFP HOP3 3HOP H 0 0 N N N N N N 40.404 -13.573 47.393 0.400 0.818 -5.540 HOP3 UFP 33
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
UFP N1 C2 SING N N 1
UFP N1 C6 SING N N 2
UFP N1 "C1'" SING N N 3
UFP C2 N3 SING N N 4
UFP C2 O2 DOUB N N 5
UFP N3 C4 SING N N 6
UFP N3 HN3 SING N N 7
UFP C4 C5 SING N N 8
UFP C4 O4 DOUB N N 9
UFP C5 C6 DOUB N N 10
UFP C5 F5 SING N N 11
UFP C6 H6 SING N N 12
UFP "C1'" "C2'" SING N N 13
UFP "C1'" "O4'" SING N N 14
UFP "C1'" "H1'" SING N N 15
UFP "C2'" "C3'" SING N N 16
UFP "C2'" "H2'1" SING N N 17
UFP "C2'" "H2'2" SING N N 18
UFP "C3'" "C4'" SING N N 19
UFP "C3'" "O3'" SING N N 20
UFP "C3'" "H3'" SING N N 21
UFP "C4'" "O4'" SING N N 22
UFP "C4'" "C5'" SING N N 23
UFP "C4'" "H4'" SING N N 24
UFP "O3'" "HO3'" SING N N 25
UFP "C5'" "O5'" SING N N 26
UFP "C5'" "H5'1" SING N N 27
UFP "C5'" "H5'2" SING N N 28
UFP "O5'" P SING N N 29
UFP P O1P DOUB N N 30
UFP P O2P SING N N 31
UFP P O3P SING N N 32
UFP O2P HOP2 SING N N 33
UFP O3P HOP3 SING N N 34
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
UFP SMILES ACDLabs 10.04 FC=1C(=O)NC(=O)N(C=1)C2OC(C(O)C2)COP(=O)(O)O
UFP SMILES_CANONICAL CACTVS 3.341 O[C@H]1C[C@@H](O[C@@H]1CO[P](O)(O)=O)N2C=C(F)C(=O)NC2=O
UFP SMILES CACTVS 3.341 O[CH]1C[CH](O[CH]1CO[P](O)(O)=O)N2C=C(F)C(=O)NC2=O
UFP SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 C1[C@@H]([C@H](O[C@H]1N2C=C(C(=O)NC2=O)F)COP(=O)(O)O)O
UFP SMILES "OpenEye OEToolkits" 1.5.0 C1C(C(OC1N2C=C(C(=O)NC2=O)F)COP(=O)(O)O)O
UFP InChI InChI 1.03 InChI=1S/C9H12FN2O8P/c10-4-2-12(9(15)11-8(4)14)7-1-5(13)6(20-7)3-19-21(16,17)18/h2,5-7,13H,1,3H2,(H,11,14,15)(H2,16,17,18)/t5-,6+,7+/m0/s1
UFP InChIKey InChI 1.03 HFEKDTCAMMOLQP-RRKCRQDMSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
UFP "SYSTEMATIC NAME" ACDLabs 10.04 "2'-deoxy-5-fluorouridine 5'-(dihydrogen phosphate)"
UFP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3S,5R)-5-(5-fluoro-2,4-dioxo-pyrimidin-1-yl)-3-hydroxy-oxolan-2-yl]methyl dihydrogen phosphate"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
UFP 'Create component' 1999-07-08 RCSB
UFP 'Modify descriptor' 2011-06-04 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id UFP
_pdbe_chem_comp_drugbank_details.drugbank_id DB03761
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name "5-fluoro-2'-deoxyuridine-5'-monophosphate"
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number 134-46-3
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
loop_
_pdbe_chem_comp_synonyms.comp_id
_pdbe_chem_comp_synonyms.name
_pdbe_chem_comp_synonyms.provenance
_pdbe_chem_comp_synonyms.type
UFP '5-fluorodeoxyuridine monophosphate' DrugBank ?
UFP 5FdUMP DrugBank ?
UFP F-dUMP DrugBank ?
#
_pdbe_chem_comp_drugbank_classification.comp_id UFP
_pdbe_chem_comp_drugbank_classification.drugbank_id DB03761
_pdbe_chem_comp_drugbank_classification.parent "Pyrimidine 2'-deoxyribonucleoside monophosphates"
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Pyrimidine nucleotides'
_pdbe_chem_comp_drugbank_classification.superclass 'Nucleosides, nucleotides, and analogues'
_pdbe_chem_comp_drugbank_classification.description
"This compound belongs to the class of organic compounds known as pyrimidine 2'-deoxyribonucleoside monophosphates. These are pyrimidine nucleotides with a monophosphate group  linked to the ribose moiety lacking a hydroxyl group at position 2."
#
loop_
_pdbe_chem_comp_drugbank_targets.comp_id
_pdbe_chem_comp_drugbank_targets.drugbank_id
_pdbe_chem_comp_drugbank_targets.name
_pdbe_chem_comp_drugbank_targets.organism
_pdbe_chem_comp_drugbank_targets.uniprot_id
_pdbe_chem_comp_drugbank_targets.pharmacologically_active
_pdbe_chem_comp_drugbank_targets.ordinal
UFP DB03761 'Thymidylate synthase' 'Escherichia coli (strain K12)' P0A884 unknown 1
UFP DB03761 'Thymidylate synthase' 'Lactobacillus casei' P00469 unknown 2
UFP DB03761 'Thymidylate synthase ThyX' 'Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)' Q9WYT0 unknown 3
UFP DB03761 'Thymidylate synthase 1' 'Bacillus subtilis (strain 168)' P0CI79 unknown 4
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
UFP N1 N 5.598 1.396 1
UFP C2 C 6.897 2.146 2
UFP N3 N 6.897 3.646 3
UFP C4 C 5.598 4.396 4
UFP C5 C 4.299 3.646 5
UFP C6 C 4.299 2.146 6
UFP O2 O 8.196 1.396 7
UFP O4 O 5.598 5.896 8
UFP F5 F 3.000 4.396 9
UFP "C1'" C 5.598 -0.104 10
UFP "C2'" C 4.385 -0.986 11
UFP "C3'" C 4.848 -2.412 12
UFP "C4'" C 6.348 -2.412 13
UFP "O3'" O 3.966 -3.626 14
UFP "O4'" O 6.812 -0.986 15
UFP "C5'" C 7.230 -3.626 16
UFP "O5'" O 8.722 -3.469 17
UFP P P 9.603 -4.683 18
UFP O1P O 10.485 -5.896 19
UFP O2P O 10.817 -3.801 20
UFP O3P O 8.390 -5.564 21
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
UFP N1 C2 SINGLE NONE 1
UFP N1 C6 SINGLE NONE 2
UFP "C1'" N1 SINGLE BEGINDASH 3
UFP C2 N3 SINGLE NONE 4
UFP C2 O2 DOUBLE NONE 5
UFP N3 C4 SINGLE NONE 6
UFP C4 C5 SINGLE NONE 7
UFP C4 O4 DOUBLE NONE 8
UFP C5 C6 DOUBLE NONE 9
UFP C5 F5 SINGLE NONE 10
UFP "C1'" "C2'" SINGLE NONE 11
UFP "C1'" "O4'" SINGLE NONE 12
UFP "C2'" "C3'" SINGLE NONE 13
UFP "C3'" "C4'" SINGLE NONE 14
UFP "C3'" "O3'" SINGLE BEGINWEDGE 15
UFP "C4'" "O4'" SINGLE NONE 16
UFP "C4'" "C5'" SINGLE BEGINDASH 17
UFP "C5'" "O5'" SINGLE NONE 18
UFP "O5'" P SINGLE NONE 19
UFP P O1P DOUBLE NONE 20
UFP P O2P SINGLE NONE 21
UFP P O3P SINGLE NONE 22
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
UFP MurckoScaffold S1 scaffold 'O=c1ccn([C@H]2CCCO2)c(=O)[nH]1' InChI=1S/C8H10N2O3/c11-6-3-4-10(8(12)9-6)7-2-1-5-13-7/h3-4,7H,1-2,5H2,(H,9,11,12)/t7-/m1/s1 CWWIKVUHBBTKHC-SSDOTTSWSA-N
UFP deoxyribose F1 fragment 'OCC1OC[CH2]C1O' InChI=1S/C5H10O3/c6-3-5-4(7)1-2-8-5/h4-7H,1-3H2 NSMOSDAEGJTOIQ-UHFFFAOYSA-N
UFP phosphate F2 fragment O=P(O)(O)O InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4) NBIIXXVUZAFLBC-UHFFFAOYSA-N
UFP pyrimidine F3 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
UFP N1 S1 1
UFP C2 S1 1
UFP N3 S1 1
UFP C4 S1 1
UFP C5 S1 1
UFP C6 S1 1
UFP O2 S1 1
UFP O4 S1 1
UFP "C1'" S1 1
UFP "C2'" S1 1
UFP "C3'" S1 1
UFP "C4'" S1 1
UFP "O4'" S1 1
UFP "C1'" F1 1
UFP "C2'" F1 1
UFP "C3'" F1 1
UFP "O3'" F1 1
UFP "C4'" F1 1
UFP "O4'" F1 1
UFP "C5'" F1 1
UFP "O5'" F1 1
UFP "O5'" F2 1
UFP P F2 1
UFP O1P F2 1
UFP O2P F2 1
UFP O3P F2 1
UFP C5 F3 1
UFP C4 F3 1
UFP N3 F3 1
UFP C2 F3 1
UFP N1 F3 1
UFP C6 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id UFP
_pdbe_chem_comp_rdkit_properties.exactmw 326.032
_pdbe_chem_comp_rdkit_properties.amw 326.173
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 10
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 4
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 7
_pdbe_chem_comp_rdkit_properties.NumHBD 4
_pdbe_chem_comp_rdkit_properties.NumHBA 9
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 21
_pdbe_chem_comp_rdkit_properties.NumAtoms 33
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 12
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.556
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 3
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 132.725
_pdbe_chem_comp_rdkit_properties.tpsa 151.080
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.233
_pdbe_chem_comp_rdkit_properties.CrippenMR 64.027
_pdbe_chem_comp_rdkit_properties.chi0v 10.380
_pdbe_chem_comp_rdkit_properties.chi1v 6.223
_pdbe_chem_comp_rdkit_properties.chi2v 2.180
_pdbe_chem_comp_rdkit_properties.chi3v 2.180
_pdbe_chem_comp_rdkit_properties.chi4v 1.301
_pdbe_chem_comp_rdkit_properties.chi0n 21.486
_pdbe_chem_comp_rdkit_properties.chi1n 10.434
_pdbe_chem_comp_rdkit_properties.chi2n 1.865
_pdbe_chem_comp_rdkit_properties.chi3n 1.865
_pdbe_chem_comp_rdkit_properties.chi4n 1.106
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.360
_pdbe_chem_comp_rdkit_properties.kappa1 6.405
_pdbe_chem_comp_rdkit_properties.kappa2 5.794
_pdbe_chem_comp_rdkit_properties.kappa3 3.845
_pdbe_chem_comp_rdkit_properties.Phi 1.767
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
UFP UniChem ChEMBL CHEMBL886
UFP UniChem DrugBank DB03761
UFP UniChem PDBe UFP
UFP UniChem 'KEGG LIGAND' C04242
UFP UniChem ChEBI 2129
UFP UniChem ZINC ZINC000003875881
UFP UniChem fdasrs 7CJ707H131
UFP UniChem HMDB HMDB0060394
UFP UniChem BindingDb 50022238
UFP UniChem BRENDA 10542
UFP UniChem BRENDA 109762
UFP UniChem BRENDA 148773
UFP UniChem BRENDA 155281
UFP UniChem BRENDA 169697
UFP UniChem BRENDA 196123
UFP UniChem BRENDA 206018
UFP UniChem BRENDA 220799
UFP UniChem BRENDA 220804
UFP UniChem BRENDA 247159
UFP UniChem BRENDA 32814
UFP UniChem BRENDA 43537
UFP UniChem BRENDA 6765
UFP UniChem BRENDA 798
UFP UniChem 'Probes And Drugs' PD059482
UFP UniChem BRENDA 42067
UFP UniChem SureChEMBL SCHEMBL6107
UFP UniChem 'PubChem TPHARMA' 15347489
UFP UniChem PubChem 8642
UFP UniChem ACTor 134-46-3
UFP UniChem ACTor 88410-68-8
UFP UniChem Nikkaji J387.592J
UFP UniChem 'EPA CompTox Dashboard' DTXSID60158450
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
UFP N1 -2.368 -0.053 0.098 ETKDGv3 1
UFP C2 -2.057 1.276 -0.374 ETKDGv3 2
UFP N3 -3.117 2.196 -0.638 ETKDGv3 3
UFP C4 -4.470 1.774 -0.461 ETKDGv3 4
UFP C5 -4.751 0.402 -0.016 ETKDGv3 5
UFP C6 -3.750 -0.447 0.237 ETKDGv3 6
UFP O2 -0.863 1.634 -0.561 ETKDGv3 7
UFP O4 -5.416 2.573 -0.689 ETKDGv3 8
UFP F5 -6.036 -0.009 0.134 ETKDGv3 9
UFP "C1'" -1.312 -1.045 0.358 ETKDGv3 10
UFP "C2'" -0.733 -1.587 -0.949 ETKDGv3 11
UFP "C3'" 0.741 -1.283 -0.849 ETKDGv3 12
UFP "C4'" 0.930 -0.992 0.635 ETKDGv3 13
UFP "O3'" 1.521 -2.382 -1.244 ETKDGv3 14
UFP "O4'" -0.279 -0.468 1.126 ETKDGv3 15
UFP "C5'" 2.066 0.002 0.894 ETKDGv3 16
UFP "O5'" 3.282 -0.545 0.438 ETKDGv3 17
UFP P 4.537 0.557 0.784 ETKDGv3 18
UFP O1P 4.689 0.717 2.281 ETKDGv3 19
UFP O2P 4.218 2.062 0.072 ETKDGv3 20
UFP O3P 5.980 -0.052 0.146 ETKDGv3 21
UFP HN3 -2.906 3.165 -0.966 ETKDGv3 22
UFP H6 -3.992 -1.453 0.557 ETKDGv3 23
UFP "H1'" -1.728 -1.895 0.946 ETKDGv3 24
UFP "H2'1" -1.174 -1.097 -1.846 ETKDGv3 25
UFP "H2'2" -0.914 -2.683 -1.017 ETKDGv3 26
UFP "H3'" 0.984 -0.384 -1.463 ETKDGv3 27
UFP "H4'" 1.151 -1.937 1.184 ETKDGv3 28
UFP "HO3'" 1.477 -2.414 -2.235 ETKDGv3 29
UFP "H5'1" 1.835 0.955 0.366 ETKDGv3 30
UFP "H5'2" 2.108 0.192 1.991 ETKDGv3 31
UFP HOP2 3.696 2.564 0.747 ETKDGv3 32
UFP HOP3 6.650 0.658 0.312 ETKDGv3 33
#