data_UVA
#
_chem_comp.id UVA
_chem_comp.name N-methyl-2-(methylsulfonyl)aniline
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C8 H11 N O2 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2020-06-02
_chem_comp.pdbx_modified_date 2020-06-12
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 185.243
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code UVA
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5RJX
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
UVA C4 C1 C 0 1 Y N N N N N -22.605 11.787 25.126 1.748 -2.244 0.052 C4 UVA 1
UVA C5 C2 C 0 1 Y N N N N N -21.355 12.284 25.399 0.415 -1.879 0.005 C5 UVA 2
UVA C6 C3 C 0 1 Y N N N N N -21.084 13.181 26.487 0.065 -0.543 -0.028 C6 UVA 3
UVA C7 C4 C 0 1 N N N N N N -18.902 13.079 27.936 -1.924 0.783 1.480 C7 UVA 4
UVA N N1 N 0 1 N N N N N N -22.013 14.409 28.380 0.701 1.785 -0.047 N UVA 5
UVA C C5 C 0 1 N N N N N N -23.124 14.892 29.245 1.744 2.813 -0.032 C UVA 6
UVA O O1 O 0 1 N N N N N N -18.791 13.284 25.468 -1.710 0.830 -1.179 O UVA 7
UVA C1 C6 C 0 1 Y N N N N N -22.191 13.530 27.329 1.052 0.433 -0.014 C1 UVA 8
UVA C2 C7 C 0 1 Y N N N N N -23.498 13.004 27.051 2.390 0.062 0.034 C2 UVA 9
UVA C3 C8 C 0 1 Y N N N N N -23.695 12.185 25.983 2.734 -1.274 0.066 C3 UVA 10
UVA O1 O2 O 0 1 N N N N N N -19.561 15.214 26.809 -2.335 -1.315 -0.116 O1 UVA 11
UVA S S1 S 0 1 N N N N N N -19.552 13.790 26.578 -1.634 -0.079 -0.089 S UVA 12
UVA H1 H1 H 0 1 N N N N N N -22.768 11.118 24.294 2.020 -3.289 0.082 H1 UVA 13
UVA H2 H2 H 0 1 N N N N N N -20.534 11.985 24.764 -0.352 -2.639 -0.006 H2 UVA 14
UVA H3 H3 H 0 1 N N N N N N -19.444 13.427 28.828 -1.267 1.650 1.545 H3 UVA 15
UVA H4 H4 H 0 1 N N N N N N -18.992 11.986 27.856 -2.963 1.109 1.529 H4 UVA 16
UVA H5 H5 H 0 1 N N N N N N -17.840 13.354 28.021 -1.717 0.107 2.310 H5 UVA 17
UVA H6 H6 H 0 1 N N N N N N -21.359 13.970 28.996 -0.234 2.042 -0.080 H6 UVA 18
UVA H7 H7 H 0 1 N N N N N N -22.725 15.580 30.005 2.336 2.717 0.878 H7 UVA 19
UVA H8 H8 H 0 1 N N N N N N -23.867 15.419 28.628 2.391 2.688 -0.901 H8 UVA 20
UVA H9 H9 H 0 1 N N N N N N -23.602 14.034 29.741 1.282 3.800 -0.062 H9 UVA 21
UVA H10 H10 H 0 1 N N N N N N -24.328 13.260 27.693 3.161 0.819 0.045 H10 UVA 22
UVA H11 H11 H 0 1 N N N N N N -24.691 11.824 25.772 3.774 -1.563 0.103 H11 UVA 23
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
UVA C4 C5 DOUB Y N 1
UVA C4 C3 SING Y N 2
UVA C5 C6 SING Y N 3
UVA O S DOUB N N 4
UVA C3 C2 DOUB Y N 5
UVA C6 S SING N N 6
UVA C6 C1 DOUB Y N 7
UVA S O1 DOUB N N 8
UVA S C7 SING N N 9
UVA C2 C1 SING Y N 10
UVA C1 N SING N N 11
UVA N C SING N N 12
UVA C4 H1 SING N N 13
UVA C5 H2 SING N N 14
UVA C7 H3 SING N N 15
UVA C7 H4 SING N N 16
UVA C7 H5 SING N N 17
UVA N H6 SING N N 18
UVA C H7 SING N N 19
UVA C H8 SING N N 20
UVA C H9 SING N N 21
UVA C2 H10 SING N N 22
UVA C3 H11 SING N N 23
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
UVA SMILES ACDLabs 12.01 c1cc(S(C)(=O)=O)c(NC)cc1
UVA InChI InChI 1.03 InChI=1S/C8H11NO2S/c1-9-7-5-3-4-6-8(7)12(2,10)11/h3-6,9H,1-2H3
UVA InChIKey InChI 1.03 YLDKGNWSSXYUAH-UHFFFAOYSA-N
UVA SMILES_CANONICAL CACTVS 3.385 CNc1ccccc1[S](C)(=O)=O
UVA SMILES CACTVS 3.385 CNc1ccccc1[S](C)(=O)=O
UVA SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 CNc1ccccc1S(=O)(=O)C
UVA SMILES "OpenEye OEToolkits" 2.0.7 CNc1ccccc1S(=O)(=O)C
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
UVA "SYSTEMATIC NAME" ACDLabs 12.01 N-methyl-2-(methylsulfonyl)aniline
UVA "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 ~{N}-methyl-2-methylsulfonyl-aniline
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
UVA 'Create component' 2020-06-02 RCSB
UVA 'Initial release' 2020-06-17 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
UVA C4 C 8.196 -2.250 1
UVA C5 C 8.196 -0.750 2
UVA C6 C 6.897 0.000 3
UVA C7 C 6.897 3.000 4
UVA N N 4.299 0.000 5
UVA C C 3.000 -0.750 6
UVA O O 8.397 1.500 7
UVA C1 C 5.598 -0.750 8
UVA C2 C 5.598 -2.250 9
UVA C3 C 6.897 -3.000 10
UVA O1 O 5.397 1.500 11
UVA S S 6.897 1.500 12
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
UVA C4 C5 DOUBLE NONE 1
UVA C4 C3 SINGLE NONE 2
UVA C5 C6 SINGLE NONE 3
UVA O S DOUBLE NONE 4
UVA C3 C2 DOUBLE NONE 5
UVA C6 S SINGLE NONE 6
UVA C6 C1 DOUBLE NONE 7
UVA S O1 DOUBLE NONE 8
UVA S C7 SINGLE NONE 9
UVA C2 C1 SINGLE NONE 10
UVA C1 N SINGLE NONE 11
UVA N C SINGLE NONE 12
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
UVA MurckoScaffold S1 scaffold c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
UVA phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
UVA Z285782452 F2 fragment CNc1ccccc1S(C)(=O)=O InChI=1S/C8H11NO2S/c1-9-7-5-3-4-6-8(7)12(2,10)11/h3-6,9H,1-2H3 YLDKGNWSSXYUAH-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
UVA C4 S1 1
UVA C5 S1 1
UVA C6 S1 1
UVA C1 S1 1
UVA C2 S1 1
UVA C3 S1 1
UVA C4 F1 1
UVA C5 F1 1
UVA C6 F1 1
UVA C1 F1 1
UVA C2 F1 1
UVA C3 F1 1
UVA C F2 1
UVA N F2 1
UVA C1 F2 1
UVA C2 F2 1
UVA C3 F2 1
UVA C4 F2 1
UVA C5 F2 1
UVA C6 F2 1
UVA S F2 1
UVA O F2 1
UVA O1 F2 1
UVA C7 F2 1
#
_pdbe_chem_comp_rdkit_properties.comp_id UVA
_pdbe_chem_comp_rdkit_properties.exactmw 185.051
_pdbe_chem_comp_rdkit_properties.amw 185.248
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 3
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 4
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 3
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 12
_pdbe_chem_comp_rdkit_properties.NumAtoms 23
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 4
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.250
_pdbe_chem_comp_rdkit_properties.NumRings 1
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 87.849
_pdbe_chem_comp_rdkit_properties.tpsa 46.170
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.643
_pdbe_chem_comp_rdkit_properties.CrippenMR 48.845
_pdbe_chem_comp_rdkit_properties.chi0v 6.488
_pdbe_chem_comp_rdkit_properties.chi1v 4.172
_pdbe_chem_comp_rdkit_properties.chi2v 1.848
_pdbe_chem_comp_rdkit_properties.chi3v 1.848
_pdbe_chem_comp_rdkit_properties.chi4v 1.104
_pdbe_chem_comp_rdkit_properties.chi0n 16.672
_pdbe_chem_comp_rdkit_properties.chi1n 8.136
_pdbe_chem_comp_rdkit_properties.chi2n 1.015
_pdbe_chem_comp_rdkit_properties.chi3n 1.015
_pdbe_chem_comp_rdkit_properties.chi4n 0.568
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.030
_pdbe_chem_comp_rdkit_properties.kappa1 2.259
_pdbe_chem_comp_rdkit_properties.kappa2 3.145
_pdbe_chem_comp_rdkit_properties.kappa3 1.764
_pdbe_chem_comp_rdkit_properties.Phi 0.592
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
UVA UniChem PDBe UVA
UVA UniChem ZINC ZINC000034246003
UVA UniChem SureChEMBL SCHEMBL2634765
UVA UniChem PubChem 14196351
UVA UniChem Mcule MCULE-2181539317
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
UVA C4 -0.388 2.587 -0.213 ETKDGv3 1
UVA C5 0.651 1.748 -0.212 ETKDGv3 2
UVA C6 0.444 0.278 -0.129 ETKDGv3 3
UVA C7 3.399 0.135 -0.240 ETKDGv3 4
UVA N -1.083 -1.635 0.029 ETKDGv3 5
UVA C -2.428 -2.196 0.111 ETKDGv3 6
UVA O 1.901 -1.580 1.138 ETKDGv3 7
UVA C1 -0.824 -0.214 -0.054 ETKDGv3 8
UVA C2 -1.968 0.745 -0.057 ETKDGv3 9
UVA C3 -1.758 2.062 -0.132 ETKDGv3 10
UVA O1 1.803 -1.705 -1.314 ETKDGv3 11
UVA S 1.872 -0.778 -0.133 ETKDGv3 12
UVA H1 -0.224 3.655 -0.274 ETKDGv3 13
UVA H2 1.647 2.163 -0.273 ETKDGv3 14
UVA H3 3.420 0.723 -1.181 ETKDGv3 15
UVA H4 4.252 -0.574 -0.238 ETKDGv3 16
UVA H5 3.492 0.815 0.632 ETKDGv3 17
UVA H6 -0.303 -2.325 0.033 ETKDGv3 18
UVA H7 -2.938 -1.824 1.024 ETKDGv3 19
UVA H8 -3.011 -1.916 -0.792 ETKDGv3 20
UVA H9 -2.373 -3.304 0.165 ETKDGv3 21
UVA H10 -2.988 0.392 0.002 ETKDGv3 22
UVA H11 -2.596 2.747 -0.133 ETKDGv3 23
#