data_UZ3
#
_chem_comp.id UZ3
_chem_comp.name "2-[[3,5-bis(chloranyl)phenyl]carbamoylamino]-4-methoxy-benzamide"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C15 H13 Cl2 N3 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2023-02-15
_chem_comp.pdbx_modified_date 2024-02-23
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 354.188
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code UZ3
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 8CK6
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
UZ3 CAJ C1 C 0 1 Y N N N N N -49.763 23.226 12.487 2.309 0.467 -0.740 CAJ UZ3 1
UZ3 CAR C2 C 0 1 Y N N N N N -50.109 22.079 11.786 3.538 1.093 -0.836 CAR UZ3 2
UZ3 CLAE CL1 CL 0 0 N N N N N N -51.617 21.290 12.131 3.698 2.551 -1.764 CLAE UZ3 3
UZ3 CAI C3 C 0 1 Y N N N N N -49.319 21.553 10.791 4.640 0.558 -0.192 CAI UZ3 4
UZ3 CAS C4 C 0 1 Y N N N N N -48.124 22.181 10.517 4.515 -0.604 0.549 CAS UZ3 5
UZ3 CLAF CL2 CL 0 0 N N N N N N -47.065 21.550 9.258 5.900 -1.271 1.355 CLAF UZ3 6
UZ3 CAK C5 C 0 1 Y N N N N N -47.739 23.319 11.197 3.289 -1.234 0.647 CAK UZ3 7
UZ3 CAT C6 C 0 1 Y N N N N N -48.496 23.759 12.264 2.180 -0.696 0.007 CAT UZ3 8
UZ3 NAM N1 N 0 1 N N N N N N -48.047 24.990 12.837 0.937 -1.332 0.106 NAM UZ3 9
UZ3 CAQ C7 C 0 1 N N N N N N -48.830 25.808 13.708 -0.193 -0.599 0.153 CAQ UZ3 10
UZ3 OAD O1 O 0 1 N N N N N N -49.892 25.496 14.160 -0.139 0.609 0.026 OAD UZ3 11
UZ3 NAN N2 N 0 1 N N N N N N -48.174 27.051 13.972 -1.382 -1.205 0.340 NAN UZ3 12
UZ3 CAV C8 C 0 1 Y N N N N N -48.673 28.168 14.736 -2.558 -0.460 0.295 CAV UZ3 13
UZ3 CAL C9 C 0 1 Y N N N N N -49.964 28.139 15.264 -2.578 0.839 0.778 CAL UZ3 14
UZ3 CAU C10 C 0 1 Y N N N N N -50.496 29.273 15.872 -3.750 1.578 0.731 CAU UZ3 15
UZ3 OAO O2 O 0 1 N N N N N N -51.740 29.246 16.528 -3.766 2.850 1.205 OAO UZ3 16
UZ3 CAA C11 C 0 1 N N N N N N -52.667 28.226 16.232 -5.006 3.556 1.127 CAA UZ3 17
UZ3 CAG C12 C 0 1 Y N N N N N -49.738 30.445 15.900 -4.910 1.022 0.201 CAG UZ3 18
UZ3 CAH C13 C 0 1 Y N N N N N -48.490 30.505 15.281 -4.904 -0.266 -0.282 CAH UZ3 19
UZ3 CAW C14 C 0 1 Y N N N N N -47.979 29.381 14.637 -3.727 -1.020 -0.246 CAW UZ3 20
UZ3 CAP C15 C 0 1 N N N N N N -46.601 29.448 13.950 -3.714 -2.397 -0.768 CAP UZ3 21
UZ3 OAC O3 O 0 1 N N N N N N -46.156 28.527 13.340 -2.716 -3.082 -0.650 OAC UZ3 22
UZ3 NAB N3 N 0 1 N N N N N N -45.801 30.646 14.016 -4.807 -2.897 -1.376 NAB UZ3 23
UZ3 H1 H1 H 0 1 N N N N N N -50.451 23.688 13.180 1.449 0.885 -1.242 H1 UZ3 24
UZ3 H2 H2 H 0 1 N N N N N N -49.626 20.675 10.242 5.599 1.049 -0.269 H2 UZ3 25
UZ3 H3 H3 H 0 1 N N N N N N -46.854 23.860 10.897 3.192 -2.141 1.225 H3 UZ3 26
UZ3 H4 H4 H 0 1 N N N N N N -47.123 25.299 12.613 0.889 -2.300 0.140 H4 UZ3 27
UZ3 H5 H5 H 0 1 N N N N N N -47.260 27.159 13.580 -1.419 -2.159 0.507 H5 UZ3 28
UZ3 H6 H6 H 0 1 N N N N N N -50.552 27.235 15.201 -1.681 1.275 1.191 H6 UZ3 29
UZ3 H7 H7 H 0 1 N N N N N N -53.575 28.368 16.837 -4.880 4.557 1.538 H7 UZ3 30
UZ3 H8 H8 H 0 1 N N N N N N -52.928 28.267 15.164 -5.319 3.628 0.085 H8 UZ3 31
UZ3 H9 H9 H 0 1 N N N N N N -52.221 27.247 16.463 -5.765 3.021 1.698 H9 UZ3 32
UZ3 H10 H10 H 0 1 N N N N N N -50.123 31.317 16.408 -5.820 1.604 0.168 H10 UZ3 33
UZ3 H11 H11 H 0 1 N N N N N N -47.920 31.422 15.301 -5.807 -0.693 -0.693 H11 UZ3 34
UZ3 H12 H12 H 0 1 N N N N N N -44.912 30.679 13.560 -5.603 -2.350 -1.470 H12 UZ3 35
UZ3 H13 H13 H 0 1 N N N N N N -46.136 31.444 14.518 -4.799 -3.804 -1.720 H13 UZ3 36
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
UZ3 CLAF CAS SING N N 1
UZ3 CAS CAI DOUB Y N 2
UZ3 CAS CAK SING Y N 3
UZ3 CAI CAR SING Y N 4
UZ3 CAK CAT DOUB Y N 5
UZ3 CAR CLAE SING N N 6
UZ3 CAR CAJ DOUB Y N 7
UZ3 CAT CAJ SING Y N 8
UZ3 CAT NAM SING N N 9
UZ3 NAM CAQ SING N N 10
UZ3 OAC CAP DOUB N N 11
UZ3 CAQ NAN SING N N 12
UZ3 CAQ OAD DOUB N N 13
UZ3 CAP NAB SING N N 14
UZ3 CAP CAW SING N N 15
UZ3 NAN CAV SING N N 16
UZ3 CAW CAV DOUB Y N 17
UZ3 CAW CAH SING Y N 18
UZ3 CAV CAL SING Y N 19
UZ3 CAL CAU DOUB Y N 20
UZ3 CAH CAG DOUB Y N 21
UZ3 CAU CAG SING Y N 22
UZ3 CAU OAO SING N N 23
UZ3 CAA OAO SING N N 24
UZ3 CAJ H1 SING N N 25
UZ3 CAI H2 SING N N 26
UZ3 CAK H3 SING N N 27
UZ3 NAM H4 SING N N 28
UZ3 NAN H5 SING N N 29
UZ3 CAL H6 SING N N 30
UZ3 CAA H7 SING N N 31
UZ3 CAA H8 SING N N 32
UZ3 CAA H9 SING N N 33
UZ3 CAG H10 SING N N 34
UZ3 CAH H11 SING N N 35
UZ3 NAB H12 SING N N 36
UZ3 NAB H13 SING N N 37
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
UZ3 InChI InChI 1.06 "InChI=1S/C15H13Cl2N3O3/c1-23-11-2-3-12(14(18)21)13(7-11)20-15(22)19-10-5-8(16)4-9(17)6-10/h2-7H,1H3,(H2,18,21)(H2,19,20,22)"
UZ3 InChIKey InChI 1.06 LGINOCHKOLUZAO-UHFFFAOYSA-N
UZ3 SMILES_CANONICAL CACTVS 3.385 "COc1ccc(C(N)=O)c(NC(=O)Nc2cc(Cl)cc(Cl)c2)c1"
UZ3 SMILES CACTVS 3.385 "COc1ccc(C(N)=O)c(NC(=O)Nc2cc(Cl)cc(Cl)c2)c1"
UZ3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1ccc(c(c1)NC(=O)Nc2cc(cc(c2)Cl)Cl)C(=O)N"
UZ3 SMILES "OpenEye OEToolkits" 2.0.7 "COc1ccc(c(c1)NC(=O)Nc2cc(cc(c2)Cl)Cl)C(=O)N"
#
_pdbx_chem_comp_identifier.comp_id UZ3
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier "2-[[3,5-bis(chloranyl)phenyl]carbamoylamino]-4-methoxy-benzamide"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
UZ3 'Create component' 2023-02-15 PDBE
UZ3 'Initial release' 2024-02-28 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
UZ3 CAJ C 11.600 1.875 1
UZ3 CAR C 12.899 2.625 2
UZ3 CLAE Cl 14.198 1.875 3
UZ3 CAI C 12.899 4.125 4
UZ3 CAS C 11.600 4.875 5
UZ3 CLAF Cl 11.600 6.375 6
UZ3 CAK C 10.301 4.125 7
UZ3 CAT C 10.301 2.625 8
UZ3 NAM N 9.002 1.875 9
UZ3 CAQ C 9.002 0.375 10
UZ3 OAD O 10.301 -0.375 11
UZ3 NAN N 7.702 -0.375 12
UZ3 CAV C 7.702 -1.875 13
UZ3 CAL C 9.002 -2.625 14
UZ3 CAU C 9.002 -4.125 15
UZ3 OAO O 10.301 -4.875 16
UZ3 CAA C 10.301 -6.375 17
UZ3 CAG C 7.702 -4.875 18
UZ3 CAH C 6.404 -4.125 19
UZ3 CAW C 6.404 -2.625 20
UZ3 CAP C 5.104 -1.875 21
UZ3 OAC O 5.104 -0.375 22
UZ3 NAB N 3.805 -2.625 23
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
UZ3 CLAF CAS SINGLE NONE 1
UZ3 CAS CAI DOUBLE NONE 2
UZ3 CAS CAK SINGLE NONE 3
UZ3 CAI CAR SINGLE NONE 4
UZ3 CAK CAT DOUBLE NONE 5
UZ3 CAR CLAE SINGLE NONE 6
UZ3 CAR CAJ DOUBLE NONE 7
UZ3 CAT CAJ SINGLE NONE 8
UZ3 CAT NAM SINGLE NONE 9
UZ3 NAM CAQ SINGLE NONE 10
UZ3 OAC CAP DOUBLE NONE 11
UZ3 CAQ NAN SINGLE NONE 12
UZ3 CAQ OAD DOUBLE NONE 13
UZ3 CAP NAB SINGLE NONE 14
UZ3 CAP CAW SINGLE NONE 15
UZ3 NAN CAV SINGLE NONE 16
UZ3 CAW CAV SINGLE NONE 17
UZ3 CAW CAH DOUBLE NONE 18
UZ3 CAV CAL DOUBLE NONE 19
UZ3 CAL CAU SINGLE NONE 20
UZ3 CAH CAG SINGLE NONE 21
UZ3 CAU CAG DOUBLE NONE 22
UZ3 CAU OAO SINGLE NONE 23
UZ3 CAA OAO SINGLE NONE 24
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
UZ3 MurckoScaffold S1 scaffold O=C(Nc1ccccc1)Nc1ccccc1 InChI=1S/C13H12N2O/c16-13(14-11-7-3-1-4-8-11)15-12-9-5-2-6-10-12/h1-10H,(H2,14,15,16) GWEHVDNNLFDJLR-UHFFFAOYSA-N
UZ3 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
UZ3 phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
UZ3 CAJ S1 1
UZ3 CAR S1 1
UZ3 CAI S1 1
UZ3 CAS S1 1
UZ3 CAK S1 1
UZ3 CAT S1 1
UZ3 NAM S1 1
UZ3 CAQ S1 1
UZ3 OAD S1 1
UZ3 NAN S1 1
UZ3 CAV S1 1
UZ3 CAL S1 1
UZ3 CAU S1 1
UZ3 CAG S1 1
UZ3 CAH S1 1
UZ3 CAW S1 1
UZ3 NAB F1 1
UZ3 CAP F1 1
UZ3 OAC F1 1
UZ3 CAW F1 1
UZ3 CAJ F2 1
UZ3 CAR F2 1
UZ3 CAI F2 1
UZ3 CAS F2 1
UZ3 CAK F2 1
UZ3 CAT F2 1
UZ3 CAV F2 2
UZ3 CAW F2 2
UZ3 CAH F2 2
UZ3 CAG F2 2
UZ3 CAU F2 2
UZ3 CAL F2 2
#
_pdbe_chem_comp_rdkit_properties.comp_id UZ3
_pdbe_chem_comp_rdkit_properties.exactmw 353.033
_pdbe_chem_comp_rdkit_properties.amw 354.193
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 6
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 4
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 5
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 3
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 23
_pdbe_chem_comp_rdkit_properties.NumAtoms 36
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 8
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 3
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.067
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 160.563
_pdbe_chem_comp_rdkit_properties.tpsa 93.450
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.467
_pdbe_chem_comp_rdkit_properties.CrippenMR 88.091
_pdbe_chem_comp_rdkit_properties.chi0v 12.334
_pdbe_chem_comp_rdkit_properties.chi1v 6.318
_pdbe_chem_comp_rdkit_properties.chi2v 2.554
_pdbe_chem_comp_rdkit_properties.chi3v 2.554
_pdbe_chem_comp_rdkit_properties.chi4v 1.756
_pdbe_chem_comp_rdkit_properties.chi0n 23.822
_pdbe_chem_comp_rdkit_properties.chi1n 11.851
_pdbe_chem_comp_rdkit_properties.chi2n 2.176
_pdbe_chem_comp_rdkit_properties.chi3n 2.176
_pdbe_chem_comp_rdkit_properties.chi4n 1.340
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.440
_pdbe_chem_comp_rdkit_properties.kappa1 6.586
_pdbe_chem_comp_rdkit_properties.kappa2 7.215
_pdbe_chem_comp_rdkit_properties.kappa3 4.512
_pdbe_chem_comp_rdkit_properties.Phi 2.066
#
_pdbe_chem_comp_external_mappings.comp_id UZ3
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource SureChEMBL
_pdbe_chem_comp_external_mappings.resource_id SCHEMBL23831184
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
UZ3 CAJ 3.639 1.296 0.248 ETKDGv3 1
UZ3 CAR 4.790 1.927 -0.020 ETKDGv3 2
UZ3 CLAE 4.846 3.680 -0.070 ETKDGv3 3
UZ3 CAI 6.023 1.148 -0.256 ETKDGv3 4
UZ3 CAS 5.995 -0.189 -0.187 ETKDGv3 5
UZ3 CLAF 7.459 -1.118 -0.455 ETKDGv3 6
UZ3 CAK 4.727 -0.887 0.113 ETKDGv3 7
UZ3 CAT 3.592 -0.190 0.299 ETKDGv3 8
UZ3 NAM 2.372 -0.888 0.602 ETKDGv3 9
UZ3 CAQ 1.068 -0.424 0.220 ETKDGv3 10
UZ3 OAD 0.945 0.495 -0.635 ETKDGv3 11
UZ3 NAN -0.097 -1.056 0.770 ETKDGv3 12
UZ3 CAV -1.430 -0.575 0.530 ETKDGv3 13
UZ3 CAL -1.718 0.720 0.751 ETKDGv3 14
UZ3 CAU -3.076 1.252 0.520 ETKDGv3 15
UZ3 OAO -3.304 2.614 0.771 ETKDGv3 16
UZ3 CAA -4.555 3.273 0.596 ETKDGv3 17
UZ3 CAG -4.039 0.421 0.083 ETKDGv3 18
UZ3 CAH -3.741 -1.002 -0.164 ETKDGv3 19
UZ3 CAW -2.506 -1.497 0.043 ETKDGv3 20
UZ3 CAP -2.235 -2.927 -0.244 ETKDGv3 21
UZ3 OAC -1.452 -3.583 0.492 ETKDGv3 22
UZ3 NAB -2.863 -3.586 -1.346 ETKDGv3 23
UZ3 H1 2.750 1.877 0.456 ETKDGv3 24
UZ3 H2 6.950 1.664 -0.475 ETKDGv3 25
UZ3 H3 4.718 -1.969 0.166 ETKDGv3 26
UZ3 H4 2.436 -1.821 1.070 ETKDGv3 27
UZ3 H5 0.035 -1.885 1.389 ETKDGv3 28
UZ3 H6 -0.953 1.393 1.119 ETKDGv3 29
UZ3 H7 -4.443 4.342 0.867 ETKDGv3 30
UZ3 H8 -5.323 2.817 1.257 ETKDGv3 31
UZ3 H9 -4.876 3.207 -0.465 ETKDGv3 32
UZ3 H10 -5.046 0.772 -0.096 ETKDGv3 33
UZ3 H11 -4.548 -1.641 -0.500 ETKDGv3 34
UZ3 H12 -2.699 -4.604 -1.510 ETKDGv3 35
UZ3 H13 -3.441 -3.058 -2.037 ETKDGv3 36
#