data_V1W
#
_chem_comp.id V1W
_chem_comp.name v-coelenterazine
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C28 H21 N3 O5"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2021-04-06
_chem_comp.pdbx_modified_date 2022-02-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 479.483
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code V1W
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7O3U
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
V1W C1 C1 C 0 1 N N N N N N 14.266 -2.978 -17.464 1.208 -2.242 0.105 C1 V1W 1
V1W C10 C2 C 0 1 Y N N N N N 16.243 0.779 -20.070 -3.531 -0.847 -0.172 C10 V1W 2
V1W C11 C3 C 0 1 Y N N N N N 18.148 2.110 -19.408 -5.319 -2.480 -0.405 C11 V1W 3
V1W C12 C4 C 0 1 Y N N N N N 18.057 2.780 -20.625 -6.229 -1.446 -0.411 C12 V1W 4
V1W C13 C5 C 0 1 Y N N N N N 17.037 2.492 -21.473 -5.804 -0.121 -0.300 C13 V1W 5
V1W C14 C6 C 0 1 Y N N N N N 16.117 1.493 -21.295 -4.480 0.180 -0.182 C14 V1W 6
V1W C15 C7 C 0 1 N N N N N N 12.386 -1.920 -21.676 0.029 2.435 0.294 C15 V1W 7
V1W C16 C8 C 0 1 Y N N N N N 11.263 -0.864 -21.729 -1.182 3.331 0.258 C16 V1W 8
V1W C17 C9 C 0 1 Y N N N N N 9.844 -1.274 -21.376 -1.827 3.670 1.432 C17 V1W 9
V1W C18 C10 C 0 1 Y N N N N N 8.826 -0.419 -21.379 -2.938 4.492 1.399 C18 V1W 10
V1W C19 C11 C 0 1 Y N N N N N 9.091 1.021 -21.750 -3.404 4.975 0.190 C19 V1W 11
V1W C2 C12 C 0 1 N N N N N N 13.536 -2.330 -19.490 0.600 -0.080 0.185 C2 V1W 12
V1W C20 C13 C 0 1 Y N N N N N 10.338 1.377 -22.039 -2.759 4.636 -0.984 C20 V1W 13
V1W C21 C14 C 0 1 Y N N N N N 11.511 0.394 -22.043 -1.645 3.819 -0.950 C21 V1W 14
V1W C22 C15 C 0 1 N N N N N N 11.924 -3.804 -16.941 3.362 -1.548 -0.962 C22 V1W 15
V1W C23 C16 C 0 1 Y N N N N N 12.330 -4.384 -15.580 4.577 -0.672 -0.798 C23 V1W 16
V1W C24 C17 C 0 1 Y N N N N N 12.641 -3.556 -14.604 4.565 0.623 -1.283 C24 V1W 17
V1W C25 C18 C 0 1 Y N N N N N 13.027 -4.170 -13.239 5.677 1.428 -1.134 C25 V1W 18
V1W C26 C19 C 0 1 Y N N N N N 13.062 -5.478 -13.083 6.808 0.937 -0.498 C26 V1W 19
V1W C27 C20 C 0 1 Y N N N N N 12.702 -6.404 -14.233 6.818 -0.363 -0.012 C27 V1W 20
V1W C28 C21 C 0 1 Y N N N N N 12.366 -5.892 -15.408 5.701 -1.162 -0.159 C28 V1W 21
V1W C3 C22 C 0 1 N N S N N N 13.131 -3.860 -17.882 2.439 -1.370 0.245 C3 V1W 22
V1W C4 C23 C 0 1 Y N N N N N 15.428 -1.007 -18.644 -1.201 -1.630 -0.043 C4 V1W 23
V1W C5 C24 C 0 1 Y N N N N N 15.382 -0.261 -19.813 -2.100 -0.560 -0.047 C5 V1W 24
V1W C6 C25 C 0 1 N N N N N N 13.455 -1.598 -20.632 -0.407 0.997 0.174 C6 V1W 25
V1W C7 C26 C 0 1 Y N N N N N 16.399 -0.688 -17.734 -1.666 -2.943 -0.156 C7 V1W 26
V1W C8 C27 C 0 1 Y N N N N N 17.307 0.344 -17.921 -2.989 -3.224 -0.273 C8 V1W 27
V1W C9 C28 C 0 1 Y N N N N N 17.249 1.061 -19.157 -3.949 -2.194 -0.285 C9 V1W 28
V1W N1 N1 N 0 1 N N N N N N 14.498 -2.003 -18.560 0.164 -1.385 0.074 N1 V1W 29
V1W N2 N2 N 0 1 N N N N N N 12.657 -3.390 -19.123 1.903 -0.003 0.287 N2 V1W 30
V1W N3 N3 N 0 1 N N N N N N 14.403 -0.576 -20.735 -1.671 0.709 0.061 N3 V1W 31
V1W O1 O1 O 0 1 N N N N N N 18.961 3.818 -20.944 -7.555 -1.720 -0.528 O1 V1W 32
V1W O2 O2 O 0 1 N N N N N N 15.089 -3.050 -16.346 1.169 -3.451 0.031 O2 V1W 33
V1W O3 O3 O 0 1 N N N N N N 13.611 -5.149 -18.091 3.134 -1.676 1.455 O3 V1W 34
V1W O4 O4 O 0 1 N N N N N N 15.026 -5.073 -18.041 2.298 -1.600 2.661 O4 V1W 35
V1W O5 O5 O 0 1 N N N N N N 13.441 -6.006 -11.828 7.904 1.727 -0.351 O5 V1W 36
V1W H1 H1 H 0 1 N N N N N N 18.891 2.390 -18.676 -5.655 -3.502 -0.492 H1 V1W 37
V1W H2 H2 H 0 1 N N N N N N 16.943 3.100 -22.361 -6.534 0.676 -0.307 H2 V1W 38
V1W H3 H3 H 0 1 N N N N N N 15.356 1.265 -22.027 -4.165 1.210 -0.096 H3 V1W 39
V1W H4 H4 H 0 1 N N N N N N 11.940 -2.895 -21.432 0.691 2.684 -0.535 H4 V1W 40
V1W H5 H5 H 0 1 N N N N N N 12.865 -1.973 -22.665 0.558 2.577 1.237 H5 V1W 41
V1W H6 H6 H 0 1 N N N N N N 9.654 -2.304 -21.111 -1.463 3.293 2.376 H6 V1W 42
V1W H7 H7 H 0 1 N N N N N N 7.830 -0.747 -21.121 -3.442 4.757 2.317 H7 V1W 43
V1W H8 H8 H 0 1 N N N N N N 8.288 1.742 -21.780 -4.272 5.617 0.164 H8 V1W 44
V1W H9 H9 H 0 1 N N N N N N 10.533 2.411 -22.283 -3.124 5.013 -1.929 H9 V1W 45
V1W H10 H10 H 0 1 N N N N N N 12.510 0.719 -22.295 -1.141 3.554 -1.868 H10 V1W 46
V1W H11 H11 H 0 1 N N N N N N 11.601 -2.760 -16.816 2.830 -1.265 -1.871 H11 V1W 47
V1W H12 H12 H 0 1 N N N N N N 11.098 -4.396 -17.363 3.673 -2.590 -1.032 H12 V1W 48
V1W H13 H13 H 0 1 N N N N N N 12.627 -2.486 -14.752 3.684 1.005 -1.778 H13 V1W 49
V1W H14 H14 H 0 1 N N N N N N 13.269 -3.523 -12.409 5.667 2.440 -1.514 H14 V1W 50
V1W H15 H15 H 0 1 N N N N N N 12.720 -7.475 -14.093 7.696 -0.748 0.484 H15 V1W 51
V1W H16 H16 H 0 1 N N N N N N 12.120 -6.541 -16.235 5.706 -2.172 0.223 H16 V1W 52
V1W H17 H17 H 0 1 N N N N N N 16.462 -1.268 -16.825 -0.954 -3.756 -0.151 H17 V1W 53
V1W H18 H18 H 0 1 N N N N N N 18.031 0.597 -17.161 -3.309 -4.252 -0.359 H18 V1W 54
V1W H20 H20 H 0 1 N N N N N N 19.612 3.894 -20.256 -8.005 -1.852 0.318 H20 V1W 55
V1W H21 H21 H 0 1 N N N N N N 15.285 -4.371 -17.455 2.769 -1.807 3.480 H21 V1W 56
V1W H22 H22 H 0 1 N N N N N N 13.631 -5.294 -11.229 7.910 2.243 0.467 H22 V1W 57
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
V1W C21 C20 DOUB Y N 1
V1W C21 C16 SING Y N 2
V1W C20 C19 SING Y N 3
V1W C19 C18 DOUB Y N 4
V1W C16 C15 SING N N 5
V1W C16 C17 DOUB Y N 6
V1W C15 C6 SING N N 7
V1W C13 C14 DOUB Y N 8
V1W C13 C12 SING Y N 9
V1W C18 C17 SING Y N 10
V1W C14 C10 SING Y N 11
V1W O1 C12 SING N N 12
V1W N3 C6 DOUB N N 13
V1W N3 C5 SING N N 14
V1W C6 C2 SING N N 15
V1W C12 C11 DOUB Y N 16
V1W C10 C5 DOUB Y N 17
V1W C10 C9 SING Y N 18
V1W C5 C4 SING Y N 19
V1W C2 N2 DOUB N N 20
V1W C2 N1 SING N N 21
V1W C11 C9 SING Y N 22
V1W C9 C8 DOUB Y N 23
V1W N2 C3 SING N N 24
V1W C4 N1 SING N N 25
V1W C4 C7 DOUB Y N 26
V1W N1 C1 SING N N 27
V1W O3 O4 SING N N 28
V1W O3 C3 SING N N 29
V1W C8 C7 SING Y N 30
V1W C3 C1 SING N N 31
V1W C3 C22 SING N N 32
V1W C1 O2 DOUB N N 33
V1W C22 C23 SING N N 34
V1W C23 C28 DOUB Y N 35
V1W C23 C24 SING Y N 36
V1W C28 C27 SING Y N 37
V1W C24 C25 DOUB Y N 38
V1W C27 C26 DOUB Y N 39
V1W C25 C26 SING Y N 40
V1W C26 O5 SING N N 41
V1W C11 H1 SING N N 42
V1W C13 H2 SING N N 43
V1W C14 H3 SING N N 44
V1W C15 H4 SING N N 45
V1W C15 H5 SING N N 46
V1W C17 H6 SING N N 47
V1W C18 H7 SING N N 48
V1W C19 H8 SING N N 49
V1W C20 H9 SING N N 50
V1W C21 H10 SING N N 51
V1W C22 H11 SING N N 52
V1W C22 H12 SING N N 53
V1W C24 H13 SING N N 54
V1W C25 H14 SING N N 55
V1W C27 H15 SING N N 56
V1W C28 H16 SING N N 57
V1W C7 H17 SING N N 58
V1W C8 H18 SING N N 59
V1W O1 H20 SING N N 60
V1W O4 H21 SING N N 61
V1W O5 H22 SING N N 62
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
V1W InChI InChI 1.03 InChI=1S/C28H21N3O5/c32-20-9-6-18(7-10-20)16-28(36-35)27(34)31-24-13-8-19-15-21(33)11-12-22(19)25(24)29-23(26(31)30-28)14-17-4-2-1-3-5-17/h1-13,15,32-33,35H,14,16H2/t28-/m0/s1
V1W InChIKey InChI 1.03 ZSLLQPODRCGPLM-NDEPHWFRSA-N
V1W SMILES_CANONICAL CACTVS 3.385 OO[C@]1(Cc2ccc(O)cc2)N=C3N(C1=O)c4ccc5cc(O)ccc5c4N=C3Cc6ccccc6
V1W SMILES CACTVS 3.385 OO[C]1(Cc2ccc(O)cc2)N=C3N(C1=O)c4ccc5cc(O)ccc5c4N=C3Cc6ccccc6
V1W SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 c1ccc(cc1)CC2=Nc3c4ccc(cc4ccc3N5C2=N[C@@](C5=O)(Cc6ccc(cc6)O)OO)O
V1W SMILES "OpenEye OEToolkits" 2.0.7 c1ccc(cc1)CC2=Nc3c4ccc(cc4ccc3N5C2=NC(C5=O)(Cc6ccc(cc6)O)OO)O
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
V1W 'Create component' 2021-04-06 PDBE
V1W 'Initial release' 2022-02-09 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
V1W C1 C 13.312 -2.956 1
V1W C10 C 7.930 -3.259 2
V1W C11 C 6.515 -5.646 3
V1W C12 C 5.106 -4.832 4
V1W C13 C 5.118 -3.205 5
V1W C14 C 6.540 -2.413 6
V1W C15 C 10.594 1.251 7
V1W C16 C 9.295 2.001 8
V1W C17 C 7.996 1.251 9
V1W C18 C 6.697 2.001 10
V1W C19 C 6.697 3.501 11
V1W C2 C 11.893 -0.999 12
V1W C20 C 7.996 4.251 13
V1W C21 C 9.295 3.501 14
V1W C22 C 15.402 -0.868 15
V1W C23 C 15.245 0.624 16
V1W C24 C 16.458 1.506 17
V1W C25 C 16.301 2.998 18
V1W C26 C 14.931 3.608 19
V1W C27 C 13.718 2.726 20
V1W C28 C 13.874 1.234 21
V1W C3 C 14.188 -1.749 22
V1W C4 C 10.594 -3.249 23
V1W C5 C 9.295 -2.499 24
V1W C6 C 10.594 -0.249 25
V1W C7 C 10.618 -4.811 26
V1W C8 C 9.271 -5.603 27
V1W C9 C 7.918 -4.822 28
V1W N1 N 11.893 -2.499 29
V1W N2 N 13.312 -0.542 30
V1W N3 N 9.295 -0.999 31
V1W O1 O 3.804 -5.578 32
V1W O2 O 13.779 -4.382 33
V1W O3 O 15.402 -2.631 34
V1W O4 O 16.772 -2.021 35
V1W O5 O 14.774 5.100 36
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
V1W C21 C20 DOUBLE NONE 1
V1W C21 C16 SINGLE NONE 2
V1W C20 C19 SINGLE NONE 3
V1W C19 C18 DOUBLE NONE 4
V1W C16 C15 SINGLE NONE 5
V1W C16 C17 DOUBLE NONE 6
V1W C15 C6 SINGLE NONE 7
V1W C13 C14 DOUBLE NONE 8
V1W C13 C12 SINGLE NONE 9
V1W C18 C17 SINGLE NONE 10
V1W C14 C10 SINGLE NONE 11
V1W O1 C12 SINGLE NONE 12
V1W N3 C6 DOUBLE NONE 13
V1W N3 C5 SINGLE NONE 14
V1W C6 C2 SINGLE NONE 15
V1W C12 C11 DOUBLE NONE 16
V1W C10 C5 DOUBLE NONE 17
V1W C10 C9 SINGLE NONE 18
V1W C5 C4 SINGLE NONE 19
V1W C2 N2 DOUBLE NONE 20
V1W C2 N1 SINGLE NONE 21
V1W C11 C9 SINGLE NONE 22
V1W C9 C8 DOUBLE NONE 23
V1W N2 C3 SINGLE NONE 24
V1W C4 N1 SINGLE NONE 25
V1W C4 C7 DOUBLE NONE 26
V1W N1 C1 SINGLE NONE 27
V1W O3 O4 SINGLE NONE 28
V1W O3 C3 SINGLE NONE 29
V1W C8 C7 SINGLE NONE 30
V1W C3 C1 SINGLE NONE 31
V1W C3 C22 SINGLE BEGINDASH 32
V1W C1 O2 DOUBLE NONE 33
V1W C22 C23 SINGLE NONE 34
V1W C23 C28 SINGLE NONE 35
V1W C23 C24 DOUBLE NONE 36
V1W C28 C27 DOUBLE NONE 37
V1W C24 C25 SINGLE NONE 38
V1W C27 C26 SINGLE NONE 39
V1W C25 C26 DOUBLE NONE 40
V1W C26 O5 SINGLE NONE 41
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
V1W MurckoScaffold S1 scaffold O=C1C(Cc2ccccc2)N=C2C(Cc3ccccc3)=Nc3c(ccc4ccccc34)N12 InChI=1S/C28H21N3O/c32-28-24(18-20-11-5-2-6-12-20)30-27-23(17-19-9-3-1-4-10-19)29-26-22-14-8-7-13-21(22)15-16-25(26)31(27)28/h1-16,24H,17-18H2 FJVVGQIPRRZDNZ-UHFFFAOYSA-N
V1W amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
V1W napthalene F2 fragment c1ccc2ccccc2c1 InChI=1S/C10H8/c1-2-6-10-8-4-3-7-9(10)5-1/h1-8H UFWIBTONFRDIAS-UHFFFAOYSA-N
V1W peptide F3 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
V1W phenyl F4 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
V1W Z419084966 F5 fragment NCC(O)Cc1ccccc1 InChI=1S/C9H13NO/c10-7-9(11)6-8-4-2-1-3-5-8/h1-5,9,11H,6-7,10H2 JIIXMZQZEAAIJX-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
V1W C1 S1 1
V1W C10 S1 1
V1W C11 S1 1
V1W C12 S1 1
V1W C13 S1 1
V1W C14 S1 1
V1W C15 S1 1
V1W C16 S1 1
V1W C17 S1 1
V1W C18 S1 1
V1W C19 S1 1
V1W C2 S1 1
V1W C20 S1 1
V1W C21 S1 1
V1W C22 S1 1
V1W C23 S1 1
V1W C24 S1 1
V1W C25 S1 1
V1W C26 S1 1
V1W C27 S1 1
V1W C28 S1 1
V1W C3 S1 1
V1W C4 S1 1
V1W C5 S1 1
V1W C6 S1 1
V1W C7 S1 1
V1W C8 S1 1
V1W C9 S1 1
V1W N1 S1 1
V1W N2 S1 1
V1W N3 S1 1
V1W O2 S1 1
V1W N1 F1 1
V1W C1 F1 1
V1W O2 F1 1
V1W C3 F1 1
V1W C12 F2 1
V1W C13 F2 1
V1W C14 F2 1
V1W C10 F2 1
V1W C9 F2 1
V1W C11 F2 1
V1W C8 F2 1
V1W C7 F2 1
V1W C4 F2 1
V1W C5 F2 1
V1W O2 F3 1
V1W C1 F3 1
V1W C3 F3 1
V1W N2 F3 1
V1W C10 F4 1
V1W C14 F4 1
V1W C13 F4 1
V1W C12 F4 1
V1W C11 F4 1
V1W C9 F4 1
V1W C10 F4 2
V1W C5 F4 2
V1W C4 F4 2
V1W C7 F4 2
V1W C8 F4 2
V1W C9 F4 2
V1W C16 F4 3
V1W C21 F4 3
V1W C20 F4 3
V1W C19 F4 3
V1W C18 F4 3
V1W C17 F4 3
V1W C23 F4 4
V1W C28 F4 4
V1W C27 F4 4
V1W C26 F4 4
V1W C25 F4 4
V1W C24 F4 4
V1W N1 F5 1
V1W C1 F5 1
V1W C3 F5 1
V1W O3 F5 1
V1W C22 F5 1
V1W C23 F5 1
V1W C28 F5 1
V1W C27 F5 1
V1W C26 F5 1
V1W C25 F5 1
V1W C24 F5 1
#
_pdbe_chem_comp_rdkit_properties.comp_id V1W
_pdbe_chem_comp_rdkit_properties.exactmw 479.148
_pdbe_chem_comp_rdkit_properties.amw 479.492
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 8
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 8
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 36
_pdbe_chem_comp_rdkit_properties.NumAtoms 57
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 8
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.107
_pdbe_chem_comp_rdkit_properties.NumRings 6
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 235.307
_pdbe_chem_comp_rdkit_properties.tpsa 114.950
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.530
_pdbe_chem_comp_rdkit_properties.CrippenMR 130.424
_pdbe_chem_comp_rdkit_properties.chi0v 17.383
_pdbe_chem_comp_rdkit_properties.chi1v 9.798
_pdbe_chem_comp_rdkit_properties.chi2v 4.944
_pdbe_chem_comp_rdkit_properties.chi3v 4.944
_pdbe_chem_comp_rdkit_properties.chi4v 3.457
_pdbe_chem_comp_rdkit_properties.chi0n 38.383
_pdbe_chem_comp_rdkit_properties.chi1n 20.023
_pdbe_chem_comp_rdkit_properties.chi2n 4.944
_pdbe_chem_comp_rdkit_properties.chi3n 4.944
_pdbe_chem_comp_rdkit_properties.chi4n 3.457
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -4.530
_pdbe_chem_comp_rdkit_properties.kappa1 8.846
_pdbe_chem_comp_rdkit_properties.kappa2 8.298
_pdbe_chem_comp_rdkit_properties.kappa3 3.512
_pdbe_chem_comp_rdkit_properties.Phi 2.039
#
_pdbe_chem_comp_external_mappings.comp_id V1W
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PDBe
_pdbe_chem_comp_external_mappings.resource_id V1W
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
V1W C1 1.403 -0.351 0.924 ETKDGv3 1
V1W C10 -2.545 -2.327 -1.507 ETKDGv3 2
V1W C11 -3.324 -4.742 -1.296 ETKDGv3 3
V1W C12 -4.343 -4.475 -2.129 ETKDGv3 4
V1W C13 -4.528 -3.121 -2.701 ETKDGv3 5
V1W C14 -3.694 -2.113 -2.416 ETKDGv3 6
V1W C15 -1.299 2.338 -2.014 ETKDGv3 7
V1W C16 -2.108 3.137 -1.029 ETKDGv3 8
V1W C17 -3.442 2.975 -0.947 ETKDGv3 9
V1W C18 -4.222 3.727 0.058 ETKDGv3 10
V1W C19 -3.604 4.563 0.901 ETKDGv3 11
V1W C2 0.112 0.745 -0.535 ETKDGv3 12
V1W C20 -2.139 4.737 0.826 ETKDGv3 13
V1W C21 -1.429 4.063 -0.088 ETKDGv3 14
V1W C22 3.301 1.184 0.279 ETKDGv3 15
V1W C23 4.343 0.572 1.183 ETKDGv3 16
V1W C24 4.844 1.264 2.223 ETKDGv3 17
V1W C25 5.851 0.649 3.113 ETKDGv3 18
V1W C26 6.271 -0.604 2.891 ETKDGv3 19
V1W C27 5.723 -1.371 1.749 ETKDGv3 20
V1W C28 4.813 -0.815 0.940 ETKDGv3 21
V1W C3 1.873 1.075 0.850 ETKDGv3 22
V1W C4 -0.551 -1.628 -0.263 ETKDGv3 23
V1W C5 -1.680 -1.345 -1.191 ETKDGv3 24
V1W C6 -1.016 0.973 -1.460 ETKDGv3 25
V1W C7 -0.384 -2.858 0.249 ETKDGv3 26
V1W C8 -1.334 -3.934 -0.101 ETKDGv3 27
V1W C9 -2.360 -3.685 -0.932 ETKDGv3 28
V1W N1 0.328 -0.535 0.021 ETKDGv3 29
V1W N2 0.926 1.663 -0.111 ETKDGv3 30
V1W N3 -1.830 -0.012 -1.730 ETKDGv3 31
V1W O1 -5.253 -5.475 -2.471 ETKDGv3 32
V1W O2 1.834 -1.231 1.715 ETKDGv3 33
V1W O3 1.796 1.729 2.103 ETKDGv3 34
V1W O4 0.531 1.723 2.488 ETKDGv3 35
V1W O5 7.218 -1.176 3.735 ETKDGv3 36
V1W H1 -3.207 -5.740 -0.889 ETKDGv3 37
V1W H2 -5.362 -2.943 -3.368 ETKDGv3 38
V1W H3 -3.873 -1.142 -2.859 ETKDGv3 39
V1W H4 -0.344 2.860 -2.240 ETKDGv3 40
V1W H5 -1.850 2.250 -2.977 ETKDGv3 41
V1W H6 -3.956 2.288 -1.607 ETKDGv3 42
V1W H7 -5.295 3.596 0.114 ETKDGv3 43
V1W H8 -4.174 5.112 1.639 ETKDGv3 44
V1W H9 -1.641 5.411 1.512 ETKDGv3 45
V1W H10 -0.355 4.197 -0.134 ETKDGv3 46
V1W H11 3.340 0.693 -0.719 ETKDGv3 47
V1W H12 3.543 2.256 0.111 ETKDGv3 48
V1W H13 4.516 2.277 2.422 ETKDGv3 49
V1W H14 6.245 1.217 3.945 ETKDGv3 50
V1W H15 6.059 -2.384 1.567 ETKDGv3 51
V1W H16 4.415 -1.385 0.110 ETKDGv3 52
V1W H17 0.438 -3.087 0.910 ETKDGv3 53
V1W H18 -1.190 -4.921 0.321 ETKDGv3 54
V1W H20 -5.173 -6.418 -2.109 ETKDGv3 55
V1W H21 0.235 2.666 2.405 ETKDGv3 56
V1W H22 7.550 -2.121 3.587 ETKDGv3 57
#