data_V6A
#
_chem_comp.id V6A
_chem_comp.name 'selinexor, bound form'
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula 'C17 H13 F6 N7 O'
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms "3-{3-[3,5-bis(trifluoromethyl)phenyl]-1H-1,2,4-triazol-1-yl}-N'-(pyrazin-2-yl)propanehydrazide"
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2020-07-06
_chem_comp.pdbx_modified_date 2024-09-27
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 445.322
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code V6A
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6XJS
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
_chem_comp.pdbx_pcm Y
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
V6A C10 C1 C 0 1 Y N N N N N 22.260 20.679 28.964 -0.190 3.252 -0.224 C10 V6A 1
V6A C11 C2 C 0 1 N N N N N N 21.514 22.837 29.711 1.982 2.287 -1.039 C11 V6A 2
V6A C12 C3 C 0 1 N N N N N N 22.062 23.830 28.696 2.768 1.251 -0.232 C12 V6A 3
V6A C13 C4 C 0 1 N N N N N N 21.701 23.480 27.254 4.222 1.310 -0.622 C13 V6A 4
V6A C14 C5 C 0 1 Y N N N N N 24.629 25.023 26.475 7.379 -0.317 0.205 C14 V6A 5
V6A C15 C6 C 0 1 Y N N N N N 26.006 25.221 26.402 8.724 -0.265 -0.154 C15 V6A 6
V6A C16 C7 C 0 1 Y N N N N N 25.738 27.471 26.268 9.183 -1.940 1.337 C16 V6A 7
V6A C17 C8 C 0 1 Y N N N N N 24.365 27.276 26.336 7.848 -1.998 1.692 C17 V6A 8
V6A C01 C9 C 0 1 Y N N N N N 19.174 16.604 26.919 -3.693 -1.525 -0.335 C01 V6A 9
V6A C02 C10 C 0 1 Y N N N N N 17.829 16.763 26.931 -4.886 -0.984 0.111 C02 V6A 10
V6A C03 C11 C 0 1 Y N N N N N 17.318 17.919 27.415 -4.964 0.359 0.432 C03 V6A 11
V6A C04 C12 C 0 1 Y N N N N N 18.126 18.914 27.906 -3.852 1.167 0.309 C04 V6A 12
V6A C05 C13 C 0 1 Y N N N N N 19.475 18.743 27.878 -2.649 0.628 -0.140 C05 V6A 13
V6A C06 C14 C 0 1 Y N N N N N 19.989 17.583 27.383 -2.575 -0.726 -0.462 C06 V6A 14
V6A C07 C15 C 0 1 N N N N N N 19.737 15.332 26.379 -3.614 -2.990 -0.677 C07 V6A 15
V6A C08 C16 C 0 1 N N N N N N 15.849 18.087 27.446 -6.267 0.941 0.918 C08 V6A 16
V6A C09 C17 C 0 1 Y N N N N N 20.432 19.772 28.383 -1.450 1.492 -0.274 C09 V6A 17
V6A F01 F1 F 0 1 N N N N N N 19.609 15.226 25.100 -3.250 -3.136 -2.020 F01 V6A 18
V6A F02 F2 F 0 1 N N N N N N 19.150 14.310 26.880 -2.656 -3.607 0.135 F02 V6A 19
V6A F03 F3 F 0 1 N N N N N N 20.971 15.197 26.696 -4.861 -3.587 -0.465 F03 V6A 20
V6A F04 F4 F 0 1 N N N N N N 15.153 17.335 26.658 -6.091 1.473 2.200 F04 V6A 21
V6A F05 F5 F 0 1 N N N N N N 15.561 19.301 27.100 -6.679 1.954 0.045 F05 V6A 22
V6A F06 F6 F 0 1 N N N N N N 15.427 17.759 28.632 -7.240 -0.063 0.959 F06 V6A 23
V6A N01 N1 N 0 1 Y N N N N N 21.714 19.588 28.478 -1.395 2.801 0.004 N01 V6A 24
V6A N02 N2 N 0 1 Y N N N N N 21.323 21.509 29.157 0.568 2.230 -0.660 N02 V6A 25
V6A N03 N3 N 0 1 Y N N N N N 20.194 20.950 28.795 -0.263 1.097 -0.681 N03 V6A 26
V6A N04 N4 N 0 1 N N N N N N 22.735 23.409 26.238 5.111 0.482 -0.036 N04 V6A 27
V6A N05 N5 N 0 1 N N N N N N 24.082 23.668 26.592 6.463 0.536 -0.399 N05 V6A 28
V6A N06 N6 N 0 1 Y N N N N N 26.528 26.426 26.304 9.590 -1.077 0.422 N06 V6A 29
V6A N07 N7 N 0 1 Y N N N N N 23.827 26.073 26.439 6.974 -1.188 1.121 N07 V6A 30
V6A O01 O1 O 0 1 N N N N N N 20.580 23.274 26.966 4.594 2.101 -1.462 O01 V6A 31
V6A H1 H1 H 0 1 N N N N N N 23.310 20.838 29.162 0.139 4.272 -0.090 H1 V6A 32
V6A H2 H2 H 0 1 N Y N N N N 22.221 22.768 30.551 2.374 3.282 -0.832 H2 V6A 33
V6A H3 H3 H 0 1 N N N N N N 20.545 23.207 30.076 2.082 2.070 -2.103 H3 V6A 34
V6A H4 H4 H 0 1 N N N N N N 23.158 23.853 28.786 2.668 1.467 0.832 H4 V6A 35
V6A H5 H5 H 0 1 N N N N N N 21.655 24.826 28.926 2.376 0.255 -0.439 H5 V6A 36
V6A H6 H6 H 0 1 N N N N N N 26.663 24.364 26.426 9.057 0.439 -0.902 H6 V6A 37
V6A H7 H7 H 0 1 N N N N N N 26.148 28.467 26.187 9.894 -2.603 1.807 H7 V6A 38
V6A H8 H8 H 0 1 N N N N N N 23.714 28.137 26.304 7.520 -2.704 2.441 H8 V6A 39
V6A H9 H9 H 0 1 N N N N N N 17.178 15.984 26.562 -5.758 -1.613 0.209 H9 V6A 40
V6A H10 H10 H 0 1 N N N N N N 17.697 19.820 28.309 -3.915 2.216 0.560 H10 V6A 41
V6A H11 H11 H 0 1 N N N N N N 21.059 17.441 27.360 -1.645 -1.149 -0.811 H11 V6A 42
V6A H12 H12 H 0 1 N N N N N N 22.498 23.179 25.294 4.814 -0.151 0.636 H12 V6A 43
V6A H13 H13 H 0 1 N N N N N N 24.185 23.398 27.549 6.760 1.170 -1.071 H13 V6A 44
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
V6A F01 C07 SING N N 1
V6A N04 N05 SING N N 2
V6A N04 C13 SING N N 3
V6A C16 N06 DOUB Y N 4
V6A C16 C17 SING Y N 5
V6A N06 C15 SING Y N 6
V6A C17 N07 DOUB Y N 7
V6A C07 F03 SING N N 8
V6A C07 F02 SING N N 9
V6A C07 C01 SING N N 10
V6A C15 C14 DOUB Y N 11
V6A N07 C14 SING Y N 12
V6A C14 N05 SING N N 13
V6A F04 C08 SING N N 14
V6A C01 C02 DOUB Y N 15
V6A C01 C06 SING Y N 16
V6A C02 C03 SING Y N 17
V6A O01 C13 DOUB N N 18
V6A F05 C08 SING N N 19
V6A C13 C12 SING N N 20
V6A C06 C05 DOUB Y N 21
V6A C03 C08 SING N N 22
V6A C03 C04 DOUB Y N 23
V6A C08 F06 SING N N 24
V6A C05 C04 SING Y N 25
V6A C05 C09 SING N N 26
V6A C09 N01 SING Y N 27
V6A C09 N03 DOUB Y N 28
V6A N01 C10 DOUB Y N 29
V6A C12 C11 SING N N 30
V6A N03 N02 SING Y N 31
V6A C10 N02 SING Y N 32
V6A N02 C11 SING N N 33
V6A C10 H1 SING N N 34
V6A C11 H2 SING N N 35
V6A C11 H3 SING N N 36
V6A C12 H4 SING N N 37
V6A C12 H5 SING N N 38
V6A C15 H6 SING N N 39
V6A C16 H7 SING N N 40
V6A C17 H8 SING N N 41
V6A C02 H9 SING N N 42
V6A C04 H10 SING N N 43
V6A C06 H11 SING N N 44
V6A N04 H12 SING N N 45
V6A N05 H13 SING N N 46
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
V6A SMILES ACDLabs 12.01 'c3n(CCC(NNc1cnccn1)=O)nc(c2cc(cc(c2)C(F)(F)F)C(F)(F)F)n3'
V6A InChI InChI 1.03 'InChI=1S/C17H13F6N7O/c18-16(19,20)11-5-10(6-12(7-11)17(21,22)23)15-26-9-30(29-15)4-1-14(31)28-27-13-8-24-2-3-25-13/h2-3,5-9H,1,4H2,(H,25,27)(H,28,31)'
V6A InChIKey InChI 1.03 SRMSVLNNUIPUGA-UHFFFAOYSA-N
V6A SMILES_CANONICAL CACTVS 3.385 'FC(F)(F)c1cc(cc(c1)C(F)(F)F)c2ncn(CCC(=O)NNc3cnccn3)n2'
V6A SMILES CACTVS 3.385 'FC(F)(F)c1cc(cc(c1)C(F)(F)F)c2ncn(CCC(=O)NNc3cnccn3)n2'
V6A SMILES_CANONICAL 'OpenEye OEToolkits' 2.0.7 'c1cnc(cn1)NNC(=O)CCn2cnc(n2)c3cc(cc(c3)C(F)(F)F)C(F)(F)F'
V6A SMILES 'OpenEye OEToolkits' 2.0.7 'c1cnc(cn1)NNC(=O)CCn2cnc(n2)c3cc(cc(c3)C(F)(F)F)C(F)(F)F'
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
V6A 'SYSTEMATIC NAME' ACDLabs 12.01 "3-{3-[3,5-bis(trifluoromethyl)phenyl]-1H-1,2,4-triazol-1-yl}-N'-(pyrazin-2-yl)propanehydrazide"
V6A 'SYSTEMATIC NAME' 'OpenEye OEToolkits' 2.0.7 "3-[3-[3,5-bis(trifluoromethyl)phenyl]-1,2,4-triazol-1-yl]-~{N}'-pyrazin-2-yl-propanehydrazide"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
V6A 'Create component' 2020-07-06 RCSB
V6A 'Initial release' 2021-01-27 RCSB
V6A 'Modify synonyms' 2021-03-13 RCSB
V6A 'Modify PCM' 2024-09-27 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id V6A
_pdbx_chem_comp_synonyms.name
"3-{3-[3,5-bis(trifluoromethyl)phenyl]-1H-1,2,4-triazol-1-yl}-N'-(pyrazin-2-yl)propanehydrazide"
_pdbx_chem_comp_synonyms.provenance PDB
_pdbx_chem_comp_synonyms.type ?
#
_pdbx_chem_comp_pcm.pcm_id 1
_pdbx_chem_comp_pcm.comp_id V6A
_pdbx_chem_comp_pcm.modified_residue_id CYS
_pdbx_chem_comp_pcm.type None
_pdbx_chem_comp_pcm.category 'Covalent chemical modification'
_pdbx_chem_comp_pcm.position 'Amino-acid side chain'
_pdbx_chem_comp_pcm.polypeptide_position 'Any position'
_pdbx_chem_comp_pcm.comp_id_linking_atom C11
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ?
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ?
#
_pdbe_chem_comp_synonyms.comp_id V6A
_pdbe_chem_comp_synonyms.name
"3-{3-[3,5-bis(trifluoromethyl)phenyl]-1H-1,2,4-triazol-1-yl}-N'-(pyrazin-2-yl)propanehydrazide"
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
V6A C10 C 7.647 -1.192 1
V6A C11 C 5.265 0.021 2
V6A C12 C 5.875 1.391 3
V6A C13 C 4.994 2.605 4
V6A C14 C 5.332 6.559 5
V6A C15 C 4.451 7.773 6
V6A C16 C 6.553 9.300 7
V6A C17 C 7.434 8.086 8
V6A C01 C 8.196 -7.251 9
V6A C02 C 6.897 -8.001 10
V6A C03 C 5.598 -7.251 11
V6A C04 C 5.598 -5.751 12
V6A C05 C 6.897 -5.001 13
V6A C06 C 8.196 -5.751 14
V6A C07 C 9.495 -8.001 15
V6A C08 C 4.299 -8.001 16
V6A C09 C 6.897 -3.501 17
V6A F01 F 8.745 -9.300 18
V6A F02 F 10.245 -6.702 19
V6A F03 F 10.794 -8.751 20
V6A F04 F 3.000 -8.751 21
V6A F05 F 5.049 -9.300 22
V6A F06 F 3.549 -6.702 23
V6A N01 N 8.111 -2.619 24
V6A N02 N 6.147 -1.192 25
V6A N03 N 5.684 -2.619 26
V6A N04 N 5.604 3.975 27
V6A N05 N 4.722 5.189 28
V6A N06 N 5.061 9.143 29
V6A N07 N 6.824 6.716 30
V6A O01 O 3.502 2.448 31
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
V6A F01 C07 SINGLE NONE 1
V6A N04 N05 SINGLE NONE 2
V6A N04 C13 SINGLE NONE 3
V6A C16 N06 SINGLE NONE 4
V6A C16 C17 DOUBLE NONE 5
V6A N06 C15 DOUBLE NONE 6
V6A C17 N07 SINGLE NONE 7
V6A C07 F03 SINGLE NONE 8
V6A C07 F02 SINGLE NONE 9
V6A C07 C01 SINGLE NONE 10
V6A C15 C14 SINGLE NONE 11
V6A N07 C14 DOUBLE NONE 12
V6A C14 N05 SINGLE NONE 13
V6A F04 C08 SINGLE NONE 14
V6A C01 C02 DOUBLE NONE 15
V6A C01 C06 SINGLE NONE 16
V6A C02 C03 SINGLE NONE 17
V6A O01 C13 DOUBLE NONE 18
V6A F05 C08 SINGLE NONE 19
V6A C13 C12 SINGLE NONE 20
V6A C06 C05 DOUBLE NONE 21
V6A C03 C08 SINGLE NONE 22
V6A C03 C04 DOUBLE NONE 23
V6A C08 F06 SINGLE NONE 24
V6A C05 C04 SINGLE NONE 25
V6A C05 C09 SINGLE NONE 26
V6A C09 N01 SINGLE NONE 27
V6A C09 N03 DOUBLE NONE 28
V6A N01 C10 DOUBLE NONE 29
V6A C12 C11 SINGLE NONE 30
V6A N03 N02 SINGLE NONE 31
V6A C10 N02 SINGLE NONE 32
V6A N02 C11 SINGLE NONE 33
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
V6A MurckoScaffold S1 scaffold O=C(CCn1cnc(-c2ccccc2)n1)NNc1cnccn1 InChI=1S/C15H15N7O/c23-14(20-19-13-10-16-7-8-17-13)6-9-22-11-18-15(21-22)12-4-2-1-3-5-12/h1-5,7-8,10-11H,6,9H2,(H,17,19)(H,20,23) QQVYHFPZRCFGPW-UHFFFAOYSA-N
V6A amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
V6A phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
V6A pyrazine F3 fragment c1cnccn1 InChI=1S/C4H4N2/c1-2-6-4-3-5-1/h1-4H KYQCOXFCLRTKLS-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
V6A C10 S1 1
V6A C11 S1 1
V6A C12 S1 1
V6A C13 S1 1
V6A C14 S1 1
V6A C15 S1 1
V6A C16 S1 1
V6A C17 S1 1
V6A C01 S1 1
V6A C02 S1 1
V6A C03 S1 1
V6A C04 S1 1
V6A C05 S1 1
V6A C06 S1 1
V6A C09 S1 1
V6A N01 S1 1
V6A N02 S1 1
V6A N03 S1 1
V6A N04 S1 1
V6A N05 S1 1
V6A N06 S1 1
V6A N07 S1 1
V6A O01 S1 1
V6A N04 F1 1
V6A C13 F1 1
V6A O01 F1 1
V6A C12 F1 1
V6A C01 F2 1
V6A C02 F2 1
V6A C03 F2 1
V6A C04 F2 1
V6A C05 F2 1
V6A C06 F2 1
V6A C14 F3 1
V6A C15 F3 1
V6A N06 F3 1
V6A C16 F3 1
V6A C17 F3 1
V6A N07 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id V6A
_pdbe_chem_comp_rdkit_properties.exactmw 445.109
_pdbe_chem_comp_rdkit_properties.amw 445.327
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 8
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 6
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 31
_pdbe_chem_comp_rdkit_properties.NumAtoms 44
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 14
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.235
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 188.242
_pdbe_chem_comp_rdkit_properties.tpsa 97.620
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.436
_pdbe_chem_comp_rdkit_properties.CrippenMR 91.198
_pdbe_chem_comp_rdkit_properties.chi0v 14.307
_pdbe_chem_comp_rdkit_properties.chi1v 7.448
_pdbe_chem_comp_rdkit_properties.chi2v 2.914
_pdbe_chem_comp_rdkit_properties.chi3v 2.914
_pdbe_chem_comp_rdkit_properties.chi4v 1.723
_pdbe_chem_comp_rdkit_properties.chi0n 27.307
_pdbe_chem_comp_rdkit_properties.chi1n 13.842
_pdbe_chem_comp_rdkit_properties.chi2n 2.914
_pdbe_chem_comp_rdkit_properties.chi3n 2.914
_pdbe_chem_comp_rdkit_properties.chi4n 1.723
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.710
_pdbe_chem_comp_rdkit_properties.kappa1 10.547
_pdbe_chem_comp_rdkit_properties.kappa2 8.572
_pdbe_chem_comp_rdkit_properties.kappa3 5.896
_pdbe_chem_comp_rdkit_properties.Phi 2.916
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
V6A UniChem SureChEMBL SCHEMBL22455236
V6A UniChem PubChem 155136071
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
V6A C10 -0.159 -2.024 -1.433 ETKDGv3 1
V6A C11 1.568 -0.411 -0.431 ETKDGv3 2
V6A C12 1.727 -0.910 1.005 ETKDGv3 3
V6A C13 3.080 -0.548 1.536 ETKDGv3 4
V6A C14 5.735 1.076 1.511 ETKDGv3 5
V6A C15 7.093 1.438 1.974 ETKDGv3 6
V6A C16 7.914 0.865 -0.192 ETKDGv3 7
V6A C17 6.687 0.545 -0.616 ETKDGv3 8
V6A C01 -5.723 -1.039 -0.896 ETKDGv3 9
V6A C02 -6.042 0.145 -0.344 ETKDGv3 10
V6A C03 -4.984 1.112 0.046 ETKDGv3 11
V6A C04 -3.695 0.797 -0.174 ETKDGv3 12
V6A C05 -3.322 -0.523 -0.742 ETKDGv3 13
V6A C06 -4.292 -1.393 -1.075 ETKDGv3 14
V6A C07 -6.803 -2.032 -1.244 ETKDGv3 15
V6A C08 -5.354 2.469 0.590 ETKDGv3 16
V6A C09 -1.898 -0.872 -0.932 ETKDGv3 17
V6A F01 -7.900 -1.385 -1.786 ETKDGv3 18
V6A F02 -7.193 -2.701 -0.098 ETKDGv3 19
V6A F03 -6.345 -2.955 -2.168 ETKDGv3 20
V6A F04 -6.623 2.450 1.142 ETKDGv3 21
V6A F05 -5.325 3.395 -0.436 ETKDGv3 22
V6A F06 -4.460 2.856 1.574 ETKDGv3 23
V6A N01 -1.446 -2.129 -1.455 ETKDGv3 24
V6A N02 0.248 -0.758 -0.942 ETKDGv3 25
V6A N03 -0.925 -0.080 -0.614 ETKDGv3 26
V6A N04 3.323 0.768 2.051 ETKDGv3 27
V6A N05 4.611 1.219 2.391 ETKDGv3 28
V6A N06 8.099 1.328 1.156 ETKDGv3 29
V6A N07 5.573 0.669 0.283 ETKDGv3 30
V6A O01 4.005 -1.405 1.515 ETKDGv3 31
V6A H1 0.515 -2.815 -1.736 ETKDGv3 32
V6A H2 1.690 0.694 -0.464 ETKDGv3 33
V6A H3 2.346 -0.868 -1.080 ETKDGv3 34
V6A H4 1.596 -2.014 1.034 ETKDGv3 35
V6A H5 0.943 -0.456 1.650 ETKDGv3 36
V6A H6 7.255 1.789 2.984 ETKDGv3 37
V6A H7 8.764 0.779 -0.856 ETKDGv3 38
V6A H8 6.529 0.197 -1.628 ETKDGv3 39
V6A H9 -7.081 0.401 -0.180 ETKDGv3 40
V6A H10 -2.916 1.510 0.067 ETKDGv3 41
V6A H11 -4.036 -2.363 -1.481 ETKDGv3 42
V6A H12 2.503 1.355 2.325 ETKDGv3 43
V6A H13 4.718 1.824 3.236 ETKDGv3 44
#