data_VKW
#
_chem_comp.id VKW
_chem_comp.name 8-chloranyl-2-[3-[4-(1,5-dimethylimidazol-2-yl)piperazin-1-yl]propyl]-3~{H}-quinazolin-4-one
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C20 H25 Cl N6 O"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2021-05-26
_chem_comp.pdbx_modified_date 2021-09-10
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 400.905
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code VKW
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7ONR
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
VKW C1 C1 C 0 1 Y N N N N N 3.472 42.261 10.287 -7.009 -1.291 -0.082 C1 VKW 1
VKW C2 C2 C 0 1 Y N N N N N 3.044 42.478 9.014 -7.124 -0.634 1.084 C2 VKW 2
VKW C3 C3 C 0 1 Y N N N N N 5.128 41.906 8.748 -5.344 0.133 0.116 C3 VKW 3
VKW C7 C4 C 0 1 N N N N N N 7.808 40.573 6.456 -2.689 2.643 0.619 C7 VKW 4
VKW C8 C5 C 0 1 N N N N N N 6.436 41.144 6.805 -3.917 1.799 0.968 C8 VKW 5
VKW C9 C6 C 0 1 N N N N N N 10.185 41.086 6.325 -0.322 2.534 0.115 C9 VKW 6
VKW C10 C7 C 0 1 N N N N N N 11.240 42.183 6.243 0.889 1.600 0.119 C10 VKW 7
VKW C11 C8 C 0 1 N N N N N N 12.491 41.699 5.527 2.158 2.409 -0.156 C11 VKW 8
VKW C12 C9 C 0 1 N N N N N N 13.738 42.469 5.796 3.352 1.489 -0.153 C12 VKW 9
VKW C13 C10 C 0 1 N N N N N N 15.066 44.390 5.104 5.683 1.241 -0.383 C13 VKW 10
VKW C14 C11 C 0 1 Y N N N N N 16.007 43.983 6.169 5.493 -0.197 -0.142 C14 VKW 11
VKW C15 C12 C 0 1 Y N N N N N 17.178 44.712 6.406 6.562 -1.090 -0.134 C15 VKW 12
VKW C16 C13 C 0 1 Y N N N N N 18.057 44.318 7.407 6.328 -2.428 0.097 C16 VKW 13
VKW C19 C14 C 0 1 Y N N N N N 15.718 42.844 6.944 4.179 -0.663 0.085 C19 VKW 14
VKW CL CL1 CL 0 0 N N N N N N 16.296 41.074 8.918 2.361 -2.621 0.598 CL VKW 15
VKW C18 C15 C 0 1 Y N N N N N 16.626 42.475 7.942 3.967 -2.024 0.317 C18 VKW 16
VKW C17 C16 C 0 1 Y N N N N N 17.786 43.197 8.179 5.038 -2.891 0.321 C17 VKW 17
VKW O O1 O 0 1 N N N N N N 15.231 45.364 4.378 6.789 1.708 -0.586 O VKW 18
VKW N4 N1 N 0 1 N N N N N N 13.952 43.596 4.971 4.580 2.025 -0.376 N4 VKW 19
VKW N5 N2 N 0 1 N N N N N N 14.566 42.075 6.756 3.154 0.225 0.067 N5 VKW 20
VKW N3 N3 N 0 1 N N N N N N 8.861 41.552 6.753 -1.541 1.757 0.379 N3 VKW 21
VKW C6 C17 C 0 1 N N N N N N 8.827 41.878 8.183 -1.819 0.824 -0.721 C6 VKW 22
VKW C5 C18 C 0 1 N N N N N N 7.495 42.507 8.542 -3.048 -0.020 -0.373 C5 VKW 23
VKW N2 N4 N 0 1 N N N N N N 6.399 41.586 8.211 -4.196 0.866 -0.133 N2 VKW 24
VKW N N5 N 0 1 Y N N N N N 4.048 42.262 8.105 -6.099 0.229 1.185 N VKW 25
VKW N1 N6 N 0 1 Y N N N N N 4.844 41.885 10.101 -5.877 -0.814 -0.703 N1 VKW 26
VKW C4 C19 C 0 1 N N N N N N 5.757 41.543 11.197 -5.351 -1.238 -2.002 C4 VKW 27
VKW C C20 C 0 1 N N N N N N 2.744 42.372 11.587 -7.939 -2.354 -0.608 C VKW 28
VKW H1 H1 H 0 1 N N N N N N 2.041 42.782 8.752 -7.906 -0.775 1.815 H1 VKW 29
VKW H2 H2 H 0 1 N N N N N N 7.835 40.325 5.385 -2.891 3.226 -0.279 H2 VKW 30
VKW H3 H3 H 0 1 N N N N N N 7.983 39.662 7.048 -2.463 3.315 1.447 H3 VKW 31
VKW H4 H4 H 0 1 N N N N N N 6.225 42.003 6.151 -3.724 1.236 1.881 H4 VKW 32
VKW H5 H5 H 0 1 N N N N N N 5.672 40.368 6.650 -4.776 2.452 1.117 H5 VKW 33
VKW H6 H6 H 0 1 N N N N N N 10.084 40.630 5.329 -0.199 3.291 0.890 H6 VKW 34
VKW H7 H7 H 0 1 N N N N N N 10.532 40.328 7.042 -0.404 3.019 -0.857 H7 VKW 35
VKW H8 H8 H 0 1 N N N N N N 11.510 42.496 7.262 0.971 1.115 1.091 H8 VKW 36
VKW H9 H9 H 0 1 N N N N N N 10.823 43.040 5.694 0.766 0.842 -0.656 H9 VKW 37
VKW H10 H10 H 0 1 N N N N N N 12.297 41.741 4.445 2.076 2.894 -1.129 H10 VKW 38
VKW H11 H11 H 0 1 N N N N N N 12.668 40.656 5.828 2.281 3.166 0.618 H11 VKW 39
VKW H12 H12 H 0 1 N N N N N N 17.399 45.584 5.808 7.568 -0.736 -0.308 H12 VKW 40
VKW H13 H13 H 0 1 N N N N N N 18.957 44.888 7.586 7.155 -3.123 0.104 H13 VKW 41
VKW H14 H14 H 0 1 N N N N N N 18.471 42.890 8.956 4.873 -3.943 0.500 H14 VKW 42
VKW H15 H15 H 0 1 N N N N N N 13.274 43.822 4.271 4.667 2.979 -0.531 H15 VKW 43
VKW H17 H17 H 0 1 N N N N N N 8.965 40.958 8.769 -2.012 1.387 -1.635 H17 VKW 44
VKW H18 H18 H 0 1 N N N N N N 9.637 42.585 8.414 -0.960 0.171 -0.871 H18 VKW 45
VKW H19 H19 H 0 1 N N N N N N 7.474 42.726 9.620 -3.274 -0.692 -1.200 H19 VKW 46
VKW H20 H20 H 0 1 N N N N N N 7.369 43.442 7.976 -2.845 -0.604 0.525 H20 VKW 47
VKW H21 H21 H 0 1 N N N N N N 5.225 41.622 12.156 -4.654 -2.064 -1.860 H21 VKW 48
VKW H22 H22 H 0 1 N N N N N N 6.121 40.513 11.063 -6.173 -1.563 -2.639 H22 VKW 49
VKW H23 H23 H 0 1 N N N N N N 6.611 42.237 11.193 -4.833 -0.403 -2.475 H23 VKW 50
VKW H24 H24 H 0 1 N N N N N N 2.282 41.405 11.833 -8.728 -1.887 -1.199 H24 VKW 51
VKW H25 H25 H 0 1 N N N N N N 3.452 42.652 12.381 -7.380 -3.049 -1.234 H25 VKW 52
VKW H26 H26 H 0 1 N N N N N N 1.962 43.141 11.505 -8.383 -2.895 0.228 H26 VKW 53
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
VKW O C13 DOUB N N 1
VKW N4 C13 SING N N 2
VKW N4 C12 SING N N 3
VKW C13 C14 SING N N 4
VKW C11 C12 SING N N 5
VKW C11 C10 SING N N 6
VKW C12 N5 DOUB N N 7
VKW C14 C15 DOUB Y N 8
VKW C14 C19 SING Y N 9
VKW C10 C9 SING N N 10
VKW C9 N3 SING N N 11
VKW C15 C16 SING Y N 12
VKW C7 N3 SING N N 13
VKW C7 C8 SING N N 14
VKW N3 C6 SING N N 15
VKW N5 C19 SING N N 16
VKW C8 N2 SING N N 17
VKW C19 C18 DOUB Y N 18
VKW C16 C17 DOUB Y N 19
VKW C18 C17 SING Y N 20
VKW C18 CL SING N N 21
VKW N C3 DOUB Y N 22
VKW N C2 SING Y N 23
VKW C6 C5 SING N N 24
VKW N2 C5 SING N N 25
VKW N2 C3 SING N N 26
VKW C3 N1 SING Y N 27
VKW C2 C1 DOUB Y N 28
VKW N1 C1 SING Y N 29
VKW N1 C4 SING N N 30
VKW C1 C SING N N 31
VKW C2 H1 SING N N 32
VKW C7 H2 SING N N 33
VKW C7 H3 SING N N 34
VKW C8 H4 SING N N 35
VKW C8 H5 SING N N 36
VKW C9 H6 SING N N 37
VKW C9 H7 SING N N 38
VKW C10 H8 SING N N 39
VKW C10 H9 SING N N 40
VKW C11 H10 SING N N 41
VKW C11 H11 SING N N 42
VKW C15 H12 SING N N 43
VKW C16 H13 SING N N 44
VKW C17 H14 SING N N 45
VKW N4 H15 SING N N 46
VKW C6 H17 SING N N 47
VKW C6 H18 SING N N 48
VKW C5 H19 SING N N 49
VKW C5 H20 SING N N 50
VKW C4 H21 SING N N 51
VKW C4 H22 SING N N 52
VKW C4 H23 SING N N 53
VKW C H24 SING N N 54
VKW C H25 SING N N 55
VKW C H26 SING N N 56
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
VKW InChI InChI 1.03 InChI=1S/C20H25ClN6O/c1-14-13-22-20(25(14)2)27-11-9-26(10-12-27)8-4-7-17-23-18-15(19(28)24-17)5-3-6-16(18)21/h3,5-6,13H,4,7-12H2,1-2H3,(H,23,24,28)
VKW InChIKey InChI 1.03 HVYNZDGGVRBTFE-UHFFFAOYSA-N
VKW SMILES_CANONICAL CACTVS 3.385 Cn1c(C)cnc1N2CCN(CCCC3=Nc4c(Cl)cccc4C(=O)N3)CC2
VKW SMILES CACTVS 3.385 Cn1c(C)cnc1N2CCN(CCCC3=Nc4c(Cl)cccc4C(=O)N3)CC2
VKW SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 Cc1cnc(n1C)N2CCN(CC2)CCCC3=Nc4c(cccc4Cl)C(=O)N3
VKW SMILES "OpenEye OEToolkits" 2.0.7 Cc1cnc(n1C)N2CCN(CC2)CCCC3=Nc4c(cccc4Cl)C(=O)N3
#
_pdbx_chem_comp_identifier.comp_id VKW
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier
8-chloranyl-2-[3-[4-(1,5-dimethylimidazol-2-yl)piperazin-1-yl]propyl]-3~{H}-quinazolin-4-one
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
VKW 'Create component' 2021-05-26 PDBE
VKW 'Initial release' 2021-09-15 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.09.6 'Core functionality.'
pdbeccdutils 0.8.6 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
VKW C1 C 11.646 -6.922 1
VKW C2 C 10.146 -6.922 2
VKW C3 C 10.896 -4.614 3
VKW C7 C 9.597 -0.864 4
VKW C8 C 9.597 -2.364 5
VKW C9 C 10.896 1.386 6
VKW C10 C 9.597 2.136 7
VKW C11 C 9.597 3.636 8
VKW C12 C 8.298 4.386 9
VKW C13 C 6.999 6.636 10
VKW C14 C 5.700 5.886 11
VKW C15 C 4.359 6.688 12
VKW C16 C 3.000 5.917 13
VKW C19 C 5.700 4.386 14
VKW CL Cl 4.376 2.084 15
VKW C18 C 4.359 3.584 16
VKW C17 C 3.000 4.355 17
VKW O O 6.999 8.136 18
VKW N4 N 8.298 5.886 19
VKW N5 N 6.999 3.636 20
VKW N3 N 10.896 -0.114 21
VKW C6 C 12.195 -0.864 22
VKW C5 C 12.195 -2.364 23
VKW N2 N 10.896 -3.114 24
VKW N N 9.683 -5.496 25
VKW N1 N 12.110 -5.496 26
VKW C4 C 13.536 -5.032 27
VKW C C 12.528 -8.136 28
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
VKW O C13 DOUBLE NONE 1
VKW N4 C13 SINGLE NONE 2
VKW N4 C12 SINGLE NONE 3
VKW C13 C14 SINGLE NONE 4
VKW C11 C12 SINGLE NONE 5
VKW C11 C10 SINGLE NONE 6
VKW C12 N5 DOUBLE NONE 7
VKW C14 C15 DOUBLE NONE 8
VKW C14 C19 SINGLE NONE 9
VKW C10 C9 SINGLE NONE 10
VKW C9 N3 SINGLE NONE 11
VKW C15 C16 SINGLE NONE 12
VKW C7 N3 SINGLE NONE 13
VKW C7 C8 SINGLE NONE 14
VKW N3 C6 SINGLE NONE 15
VKW N5 C19 SINGLE NONE 16
VKW C8 N2 SINGLE NONE 17
VKW C19 C18 DOUBLE NONE 18
VKW C16 C17 DOUBLE NONE 19
VKW C18 C17 SINGLE NONE 20
VKW C18 CL SINGLE NONE 21
VKW N C3 DOUBLE NONE 22
VKW N C2 SINGLE NONE 23
VKW C6 C5 SINGLE NONE 24
VKW N2 C5 SINGLE NONE 25
VKW N2 C3 SINGLE NONE 26
VKW C3 N1 SINGLE NONE 27
VKW C2 C1 DOUBLE NONE 28
VKW N1 C1 SINGLE NONE 29
VKW N1 C4 SINGLE NONE 30
VKW C1 C SINGLE NONE 31
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
VKW MurckoScaffold S1 scaffold 'O=c1[nH]c(CCCN2CCN(c3ncc[nH]3)CC2)nc2ccccc12' InChI=1S/C18H22N6O/c25-17-14-4-1-2-5-15(14)21-16(22-17)6-3-9-23-10-12-24(13-11-23)18-19-7-8-20-18/h1-2,4-5,7-8H,3,6,9-13H2,(H,19,20)(H,21,22,25) NMRUAOQJTHZBEI-UHFFFAOYSA-N
VKW imidazole F1 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
VKW phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
VKW piperazine F3 fragment C1CNCCN1 InChI=1S/C4H10N2/c1-2-6-4-3-5-1/h5-6H,1-4H2 GLUUGHFHXGJENI-UHFFFAOYSA-N
VKW pyrimidine F4 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
VKW quinazoline F5 fragment c1ccc2ncncc2c1 InChI=1S/C8H6N2/c1-2-4-8-7(3-1)5-9-6-10-8/h1-6H JWVCLYRUEFBMGU-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
VKW C1 S1 1
VKW C2 S1 1
VKW C3 S1 1
VKW C7 S1 1
VKW C8 S1 1
VKW C9 S1 1
VKW C10 S1 1
VKW C11 S1 1
VKW C12 S1 1
VKW C13 S1 1
VKW C14 S1 1
VKW C15 S1 1
VKW C16 S1 1
VKW C19 S1 1
VKW C18 S1 1
VKW C17 S1 1
VKW O S1 1
VKW N4 S1 1
VKW N5 S1 1
VKW N3 S1 1
VKW C6 S1 1
VKW C5 S1 1
VKW N2 S1 1
VKW N S1 1
VKW N1 S1 1
VKW C1 F1 1
VKW C2 F1 1
VKW N F1 1
VKW C3 F1 1
VKW N1 F1 1
VKW C14 F2 1
VKW C15 F2 1
VKW C16 F2 1
VKW C17 F2 1
VKW C18 F2 1
VKW C19 F2 1
VKW N3 F3 1
VKW C7 F3 1
VKW C8 F3 1
VKW N2 F3 1
VKW C5 F3 1
VKW C6 F3 1
VKW C14 F4 1
VKW C13 F4 1
VKW N4 F4 1
VKW C12 F4 1
VKW N5 F4 1
VKW C19 F4 1
VKW C16 F5 1
VKW C17 F5 1
VKW C18 F5 1
VKW C19 F5 1
VKW C14 F5 1
VKW C15 F5 1
VKW C13 F5 1
VKW N4 F5 1
VKW C12 F5 1
VKW N5 F5 1
#
_pdbe_chem_comp_rdkit_properties.comp_id VKW
_pdbe_chem_comp_rdkit_properties.exactmw 400.178
_pdbe_chem_comp_rdkit_properties.amw 400.914
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 7
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 7
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 6
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 28
_pdbe_chem_comp_rdkit_properties.NumAtoms 53
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 8
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.450
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 203.694
_pdbe_chem_comp_rdkit_properties.tpsa 70.050
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.355
_pdbe_chem_comp_rdkit_properties.CrippenMR 108.839
_pdbe_chem_comp_rdkit_properties.chi0v 14.225
_pdbe_chem_comp_rdkit_properties.chi1v 7.625
_pdbe_chem_comp_rdkit_properties.chi2v 3.492
_pdbe_chem_comp_rdkit_properties.chi3v 3.492
_pdbe_chem_comp_rdkit_properties.chi4v 2.164
_pdbe_chem_comp_rdkit_properties.chi0n 38.469
_pdbe_chem_comp_rdkit_properties.chi1n 19.694
_pdbe_chem_comp_rdkit_properties.chi2n 3.218
_pdbe_chem_comp_rdkit_properties.chi3n 3.218
_pdbe_chem_comp_rdkit_properties.chi4n 1.980
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.380
_pdbe_chem_comp_rdkit_properties.kappa1 5.401
_pdbe_chem_comp_rdkit_properties.kappa2 7.929
_pdbe_chem_comp_rdkit_properties.kappa3 3.770
_pdbe_chem_comp_rdkit_properties.Phi 1.530
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
VKW UniChem ChEMBL CHEMBL5193246
VKW UniChem PubChem 156596362
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
VKW C1 -5.441 -0.753 1.454 ETKDGv3 1
VKW C2 -5.242 -1.974 0.985 ETKDGv3 2
VKW C3 -3.672 -0.763 0.130 ETKDGv3 3
VKW C7 -1.302 1.513 -1.643 ETKDGv3 4
VKW C8 -2.638 0.774 -1.559 ETKDGv3 5
VKW C9 1.064 1.168 -2.359 ETKDGv3 6
VKW C10 1.514 2.433 -1.583 ETKDGv3 7
VKW C11 1.946 2.205 -0.127 ETKDGv3 8
VKW C12 3.062 1.207 -0.013 ETKDGv3 9
VKW C13 5.462 0.619 -0.386 ETKDGv3 10
VKW C14 5.192 -0.727 0.140 ETKDGv3 11
VKW C15 6.136 -1.679 0.236 ETKDGv3 12
VKW C16 5.783 -3.010 0.772 ETKDGv3 13
VKW C19 3.803 -1.009 0.570 ETKDGv3 14
VKW CL 1.845 -2.597 1.566 ETKDGv3 15
VKW C18 3.485 -2.223 1.054 ETKDGv3 16
VKW C17 4.527 -3.268 1.159 ETKDGv3 17
VKW O 6.615 0.949 -0.776 ETKDGv3 18
VKW N4 4.386 1.560 -0.453 ETKDGv3 19
VKW N5 2.809 0.018 0.456 ETKDGv3 20
VKW N3 -0.223 0.555 -1.947 ETKDGv3 21
VKW C6 -0.094 -0.482 -0.906 ETKDGv3 22
VKW C5 -1.398 -1.275 -0.800 ETKDGv3 23
VKW N2 -2.524 -0.352 -0.627 ETKDGv3 24
VKW N -4.105 -1.984 0.129 ETKDGv3 25
VKW N1 -4.444 0.126 0.941 ETKDGv3 26
VKW C4 -3.895 1.256 1.684 ETKDGv3 27
VKW C -6.453 -0.383 2.492 ETKDGv3 28
VKW H1 -5.819 -2.853 1.245 ETKDGv3 29
VKW H2 -1.373 2.277 -2.448 ETKDGv3 30
VKW H3 -1.113 2.026 -0.674 ETKDGv3 31
VKW H4 -2.910 0.386 -2.565 ETKDGv3 32
VKW H5 -3.434 1.481 -1.242 ETKDGv3 33
VKW H6 0.960 1.464 -3.425 ETKDGv3 34
VKW H7 1.880 0.412 -2.352 ETKDGv3 35
VKW H8 2.380 2.868 -2.129 ETKDGv3 36
VKW H9 0.726 3.214 -1.613 ETKDGv3 37
VKW H10 1.079 1.910 0.497 ETKDGv3 38
VKW H11 2.303 3.172 0.287 ETKDGv3 39
VKW H12 7.155 -1.489 -0.075 ETKDGv3 40
VKW H13 6.543 -3.776 0.849 ETKDGv3 41
VKW H14 4.274 -4.245 1.550 ETKDGv3 42
VKW H15 4.569 2.519 -0.825 ETKDGv3 43
VKW H17 0.723 -1.191 -1.162 ETKDGv3 44
VKW H18 0.121 -0.032 0.083 ETKDGv3 45
VKW H19 -1.550 -1.875 -1.724 ETKDGv3 46
VKW H20 -1.326 -1.969 0.066 ETKDGv3 47
VKW H21 -3.184 1.831 1.057 ETKDGv3 48
VKW H22 -4.714 1.936 1.998 ETKDGv3 49
VKW H23 -3.360 0.887 2.584 ETKDGv3 50
VKW H24 -6.849 0.633 2.284 ETKDGv3 51
VKW H25 -7.301 -1.101 2.484 ETKDGv3 52
VKW H26 -5.976 -0.392 3.494 ETKDGv3 53
#