data_W9P
#
_chem_comp.id W9P
_chem_comp.name
(1~{S},2~{S},3~{R},4~{S},5~{S})-1-(hydroxymethyl)-5-[6-[[2-[oxidanyl(oxidanylidene)-$l^{4}-azanyl]-4-(1,2,3,4-tetrazol-1-yl)phenyl]amino]hexylamino]cyclohexane-1,2,3,4-tetrol
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C20 H31 N7 O7"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2020-10-04
_chem_comp.pdbx_modified_date 2021-09-24
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 481.503
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code W9P
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7K9O
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
W9P N1 N1 N 0 1 N N N N N N 11.085 22.895 13.600 5.026 -0.208 -0.812 N1 W9P 1
W9P N3 N2 N 1 1 N N N N N N 21.099 24.114 15.115 -5.879 -2.604 -0.087 N3 W9P 2
W9P C4 C1 C 0 1 N N S N N N 8.667 22.983 13.210 6.672 -1.566 0.390 C4 W9P 3
W9P C5 C2 C 0 1 N N S N N N 10.006 23.722 13.058 6.231 -1.032 -0.975 C5 W9P 4
W9P C6 C3 C 0 1 N N N N N N 10.315 24.026 11.577 7.352 -0.182 -1.576 C6 W9P 5
W9P C7 C4 C 0 1 N N N N N N 10.245 23.257 9.228 8.780 1.842 -1.244 C7 W9P 6
W9P C8 C5 C 0 1 N N N N N N 12.362 23.613 13.581 3.815 -1.040 -0.817 C8 W9P 7
W9P C10 C6 C 0 1 N N N N N N 14.933 23.237 13.889 1.322 -1.016 -0.652 C10 W9P 8
W9P C13 C7 C 0 1 N N N N N N 18.314 22.846 12.454 -2.403 -0.100 -0.315 C13 W9P 9
W9P C15 C8 C 0 1 Y N N N N N 18.689 25.920 12.860 -4.983 1.049 -0.154 C15 W9P 10
W9P C17 C9 C 0 1 Y N N N N N 20.498 27.401 13.422 -7.356 0.841 0.115 C17 W9P 11
W9P C20 C10 C 0 1 Y N N N N N 21.336 29.398 12.138 -8.900 2.758 0.310 C20 W9P 12
W9P C1 C11 C 0 1 N N S N N N 10.202 22.797 10.670 7.658 0.992 -0.643 C1 W9P 13
W9P C11 C12 C 0 1 N N N N N N 16.089 22.189 13.697 0.090 -0.125 -0.481 C11 W9P 14
W9P C12 C13 C 0 1 N N N N N N 16.847 22.317 12.344 -1.171 -0.991 -0.487 C12 W9P 15
W9P C14 C14 C 0 1 Y N N N N N 19.257 24.910 13.626 -4.867 -0.336 -0.178 C14 W9P 16
W9P C16 C15 C 0 1 Y N N N N N 19.303 27.167 12.759 -6.223 1.635 -0.008 C16 W9P 17
W9P C18 C16 C 0 1 Y N N N N N 21.077 26.395 14.189 -7.243 -0.542 0.079 C18 W9P 18
W9P C19 C17 C 0 1 Y N N N N N 20.462 25.141 14.297 -6.001 -1.129 -0.061 C19 W9P 19
W9P C2 C18 C 0 1 N N S N N N 8.919 21.987 10.896 8.099 0.458 0.721 C2 W9P 20
W9P C3 C19 C 0 1 N N R N N N 8.681 21.697 12.389 6.977 -0.392 1.322 C3 W9P 21
W9P C9 C20 C 0 1 N N N N N N 13.543 22.592 13.671 2.583 -0.149 -0.646 C9 W9P 22
W9P N2 N3 N 0 1 N N N N N N 18.556 23.603 13.697 -3.610 -0.930 -0.321 N2 W9P 23
W9P N4 N4 N 0 1 Y N N N N N 21.130 28.719 13.303 -8.618 1.438 0.258 N4 W9P 24
W9P N5 N5 N 0 1 Y N N N N N 21.590 29.469 14.315 -9.861 0.790 0.377 N5 W9P 25
W9P N6 N6 N 0 1 Y N N N N N 22.080 30.589 13.818 -10.751 1.716 0.487 N6 W9P 26
W9P N7 N7 N 0 1 Y N N N N N 21.936 30.575 12.485 -10.196 2.873 0.448 N7 W9P 27
W9P O1 O1 O 0 1 N N N N N N 9.060 20.751 10.241 8.385 1.554 1.592 O1 W9P 28
W9P O2 O2 O 0 1 N N N N N N 7.484 20.975 12.571 7.389 -0.891 2.597 O2 W9P 29
W9P O3 O3 O 0 1 N N N N N N 8.412 22.685 14.563 5.624 -2.360 0.951 O3 W9P 30
W9P O4 O4 O 0 1 N N N N N N 9.330 24.302 9.061 9.145 2.870 -0.321 O4 W9P 31
W9P O5 O5 O 0 1 N N N N N N 11.309 21.949 10.912 6.486 1.793 -0.485 O5 W9P 32
W9P O6 O6 O 0 1 N N N N N N 21.894 24.492 16.207 -6.727 -3.276 -0.646 O6 W9P 33
W9P O7 O7 O -1 1 N N N N N N 20.938 22.748 14.832 -4.930 -3.146 0.450 O7 W9P 34
W9P H1 H1 H 0 1 N N N N N N 10.864 22.647 14.543 5.078 0.348 0.028 H1 W9P 35
W9P H3 H3 H 0 1 N N N N N N 7.872 23.633 12.816 7.566 -2.177 0.269 H3 W9P 36
W9P H4 H4 H 0 1 N N N N N N 9.952 24.672 13.610 6.013 -1.868 -1.639 H4 W9P 37
W9P H5 H5 H 0 1 N N N N N N 11.340 24.418 11.508 8.247 -0.793 -1.696 H5 W9P 38
W9P H6 H6 H 0 1 N N N N N N 9.606 24.788 11.222 7.038 0.199 -2.548 H6 W9P 39
W9P H7 H7 H 0 1 N N N N N N 9.977 22.421 8.565 9.645 1.211 -1.447 H7 W9P 40
W9P H8 H8 H 0 1 N N N N N N 11.258 23.609 8.982 8.434 2.295 -2.173 H8 W9P 41
W9P H9 H9 H 0 1 N N N N N N 12.445 24.186 12.646 3.747 -1.576 -1.764 H9 W9P 42
W9P H10 H10 H 0 1 N N N N N N 12.407 24.301 14.438 3.862 -1.756 0.003 H10 W9P 43
W9P H11 H11 H 0 1 N N N N N N 15.066 24.053 13.164 1.370 -1.732 0.169 H11 W9P 44
W9P H12 H12 H 0 1 N N N N N N 14.983 23.642 14.911 1.254 -1.552 -1.599 H12 W9P 45
W9P H13 H13 H 0 1 N N N N N N 19.001 21.987 12.426 -2.335 0.436 0.631 H13 W9P 46
W9P H14 H14 H 0 1 N N N N N N 18.516 23.505 11.596 -2.450 0.616 -1.136 H14 W9P 47
W9P H15 H15 H 0 1 N N N N N N 17.762 25.737 12.337 -4.101 1.666 -0.245 H15 W9P 48
W9P H16 H16 H 0 1 N N N N N N 21.077 29.071 11.142 -8.188 3.568 0.253 H16 W9P 49
W9P H17 H17 H 0 1 N N N N N N 15.654 21.180 13.755 0.158 0.412 0.465 H17 W9P 50
W9P H18 H18 H 0 1 N N N N N N 16.815 22.322 14.513 0.043 0.591 -1.302 H18 W9P 51
W9P H19 H19 H 0 1 N N N N N N 16.283 23.008 11.701 -1.123 -1.707 0.334 H19 W9P 52
W9P H20 H20 H 0 1 N N N N N N 16.878 21.322 11.875 -1.239 -1.528 -1.433 H20 W9P 53
W9P H21 H21 H 0 1 N N N N N N 18.850 27.948 12.167 -6.313 2.711 0.011 H21 W9P 54
W9P H22 H22 H 0 1 N N N N N N 22.007 26.582 14.705 -8.124 -1.158 0.175 H22 W9P 55
W9P H23 H23 H 0 1 N N N N N N 8.062 22.549 10.497 8.993 -0.153 0.601 H23 W9P 56
W9P H24 H24 H 0 1 N N N N N N 9.525 21.087 12.743 6.083 0.219 1.443 H24 W9P 57
W9P H25 H25 H 0 1 N N N N N N 13.345 21.910 14.511 2.651 0.387 0.300 H25 W9P 58
W9P H26 H26 H 0 1 N N N N N N 13.574 22.018 12.733 2.536 0.567 -1.467 H26 W9P 59
W9P H27 H27 H 0 1 N N N N N N 17.663 23.773 14.114 -3.537 -1.892 -0.423 H27 W9P 60
W9P H28 H28 H 0 1 N N N N N N 8.274 20.233 10.369 8.670 1.289 2.477 H28 W9P 61
W9P H29 H29 H 0 1 N N N N N N 7.354 20.805 13.497 6.726 -1.440 3.037 H29 W9P 62
W9P H30 H30 H 0 1 N N N N N N 8.404 23.489 15.069 5.835 -2.732 1.818 H30 W9P 63
W9P H31 H31 H 0 1 N N N N N N 9.349 24.599 8.159 9.853 3.448 -0.636 H31 W9P 64
W9P H32 H32 H 0 1 N N N N N N 11.291 21.654 11.815 6.607 2.557 0.095 H32 W9P 65
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
W9P O4 C7 SING N N 1
W9P C7 C1 SING N N 2
W9P O1 C2 SING N N 3
W9P C1 C2 SING N N 4
W9P C1 O5 SING N N 5
W9P C1 C6 SING N N 6
W9P C2 C3 SING N N 7
W9P C6 C5 SING N N 8
W9P C20 N7 DOUB Y N 9
W9P C20 N4 SING Y N 10
W9P C12 C13 SING N N 11
W9P C12 C11 SING N N 12
W9P C3 O2 SING N N 13
W9P C3 C4 SING N N 14
W9P C13 N2 SING N N 15
W9P N7 N6 SING Y N 16
W9P C16 C15 DOUB Y N 17
W9P C16 C17 SING Y N 18
W9P C15 C14 SING Y N 19
W9P C5 C4 SING N N 20
W9P C5 N1 SING N N 21
W9P C4 O3 SING N N 22
W9P N4 C17 SING N N 23
W9P N4 N5 SING Y N 24
W9P C17 C18 DOUB Y N 25
W9P C8 N1 SING N N 26
W9P C8 C9 SING N N 27
W9P C14 N2 SING N N 28
W9P C14 C19 DOUB Y N 29
W9P C9 C10 SING N N 30
W9P C11 C10 SING N N 31
W9P N6 N5 DOUB Y N 32
W9P C18 C19 SING Y N 33
W9P C19 N3 SING N N 34
W9P O7 N3 SING N N 35
W9P N3 O6 DOUB N N 36
W9P N1 H1 SING N N 37
W9P C4 H3 SING N N 38
W9P C5 H4 SING N N 39
W9P C6 H5 SING N N 40
W9P C6 H6 SING N N 41
W9P C7 H7 SING N N 42
W9P C7 H8 SING N N 43
W9P C8 H9 SING N N 44
W9P C8 H10 SING N N 45
W9P C10 H11 SING N N 46
W9P C10 H12 SING N N 47
W9P C13 H13 SING N N 48
W9P C13 H14 SING N N 49
W9P C15 H15 SING N N 50
W9P C20 H16 SING N N 51
W9P C11 H17 SING N N 52
W9P C11 H18 SING N N 53
W9P C12 H19 SING N N 54
W9P C12 H20 SING N N 55
W9P C16 H21 SING N N 56
W9P C18 H22 SING N N 57
W9P C2 H23 SING N N 58
W9P C3 H24 SING N N 59
W9P C9 H25 SING N N 60
W9P C9 H26 SING N N 61
W9P N2 H27 SING N N 62
W9P O1 H28 SING N N 63
W9P O2 H29 SING N N 64
W9P O3 H30 SING N N 65
W9P O4 H31 SING N N 66
W9P O5 H32 SING N N 67
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
W9P SMILES ACDLabs 12.01 N(C1C(O)C(C(C(C1)(CO)O)O)O)CCCCCCNc2ccc(cc2[N+](=O)[O-])n3cnnn3
W9P InChI InChI 1.03 InChI=1S/C20H31N7O7/c28-11-20(32)10-15(17(29)18(30)19(20)31)22-8-4-2-1-3-7-21-14-6-5-13(9-16(14)27(33)34)26-12-23-24-25-26/h5-6,9,12,15,17-19,21-22,28-32H,1-4,7-8,10-11H2/t15-,17-,18+,19-,20-/m0/s1
W9P InChIKey InChI 1.03 AEVYKERIFGNKMO-UVBQOVKKSA-N
W9P SMILES_CANONICAL CACTVS 3.385 OC[C@@]1(O)C[C@H](NCCCCCCNc2ccc(cc2[N+]([O-])=O)n3cnnn3)[C@H](O)[C@@H](O)[C@@H]1O
W9P SMILES CACTVS 3.385 OC[C]1(O)C[CH](NCCCCCCNc2ccc(cc2[N+]([O-])=O)n3cnnn3)[CH](O)[CH](O)[CH]1O
W9P SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 c1cc(c(cc1n2cnnn2)[N+](=O)[O-])NCCCCCCN[C@H]3C[C@@]([C@H]([C@@H]([C@H]3O)O)O)(CO)O
W9P SMILES "OpenEye OEToolkits" 2.0.7 c1cc(c(cc1n2cnnn2)[N+](=O)[O-])NCCCCCCNC3CC(C(C(C3O)O)O)(CO)O
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
W9P "SYSTEMATIC NAME" ACDLabs 12.01 (1S,2S,3R,4S,5S)-1-(hydroxymethyl)-5-[(6-{[2-nitro-4-(1H-tetrazol-1-yl)phenyl]amino}hexyl)amino]cyclohexane-1,2,3,4-tetrol
W9P "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 (1~{S},2~{S},3~{R},4~{S},5~{S})-1-(hydroxymethyl)-5-[6-[[2-nitro-4-(1,2,3,4-tetrazol-1-yl)phenyl]amino]hexylamino]cyclohexane-1,2,3,4-tetrol
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
W9P 'Create component' 2020-10-04 RCSB
W9P 'Initial release' 2021-09-29 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
W9P N1 N 9.002 -0.525 1
W9P N3 N 20.693 1.724 2
W9P C4 C 6.404 -0.525 3
W9P C5 C 7.702 0.225 4
W9P C6 C 7.702 1.724 5
W9P C7 C 7.154 3.774 6
W9P C8 C 10.301 0.225 7
W9P C10 C 12.899 0.225 8
W9P C13 C 16.796 -0.525 9
W9P C15 C 19.394 -2.026 10
W9P C17 C 21.992 -2.026 11
W9P C20 C 23.448 -4.267 12
W9P C1 C 6.404 2.474 13
W9P C11 C 14.198 -0.525 14
W9P C12 C 15.497 0.225 15
W9P C14 C 19.394 -0.525 16
W9P C16 C 20.693 -2.776 17
W9P C18 C 21.992 -0.525 18
W9P C19 C 20.693 0.225 19
W9P C2 C 5.104 1.724 20
W9P C3 C 5.104 0.225 21
W9P C9 C 11.600 -0.525 22
W9P N2 N 18.095 0.225 23
W9P N4 N 23.291 -2.776 24
W9P N5 N 24.661 -2.165 25
W9P N6 N 25.665 -3.280 26
W9P N7 N 24.915 -4.579 27
W9P O1 O 3.805 2.474 28
W9P O2 O 3.805 -0.525 29
W9P O3 O 6.404 -2.026 30
W9P O4 O 8.653 3.774 31
W9P O5 O 5.654 3.774 32
W9P O6 O 19.394 2.474 33
W9P O7 O 21.992 2.474 34
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
W9P O4 C7 SINGLE NONE 1
W9P C7 C1 SINGLE NONE 2
W9P C2 O1 SINGLE BEGINDASH 3
W9P C1 C2 SINGLE NONE 4
W9P C1 O5 SINGLE BEGINDASH 5
W9P C1 C6 SINGLE NONE 6
W9P C2 C3 SINGLE NONE 7
W9P C6 C5 SINGLE NONE 8
W9P C20 N7 DOUBLE NONE 9
W9P C20 N4 SINGLE NONE 10
W9P C12 C13 SINGLE NONE 11
W9P C12 C11 SINGLE NONE 12
W9P C3 O2 SINGLE BEGINWEDGE 13
W9P C3 C4 SINGLE NONE 14
W9P C13 N2 SINGLE NONE 15
W9P N7 N6 SINGLE NONE 16
W9P C16 C15 DOUBLE NONE 17
W9P C16 C17 SINGLE NONE 18
W9P C15 C14 SINGLE NONE 19
W9P C5 C4 SINGLE NONE 20
W9P C5 N1 SINGLE BEGINDASH 21
W9P C4 O3 SINGLE BEGINDASH 22
W9P N4 C17 SINGLE NONE 23
W9P N4 N5 SINGLE NONE 24
W9P C17 C18 DOUBLE NONE 25
W9P C8 N1 SINGLE NONE 26
W9P C8 C9 SINGLE NONE 27
W9P C14 N2 SINGLE NONE 28
W9P C14 C19 DOUBLE NONE 29
W9P C9 C10 SINGLE NONE 30
W9P C11 C10 SINGLE NONE 31
W9P N6 N5 DOUBLE NONE 32
W9P C18 C19 SINGLE NONE 33
W9P C19 N3 SINGLE NONE 34
W9P O7 N3 SINGLE NONE 35
W9P N3 O6 DOUBLE NONE 36
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
W9P MurckoScaffold S1 scaffold c1cc(-n2cnnn2)ccc1NCCCCCCNC1CCCCC1 InChI=1S/C19H30N6/c1(6-14-20-17-8-4-3-5-9-17)2-7-15-21-18-10-12-19(13-11-18)25-16-22-23-24-25/h10-13,16-17,20-21H,1-9,14-15H2 CRPJVROIFMAVPN-UHFFFAOYSA-N
W9P cyclohexane F1 fragment C1CCCCC1 InChI=1S/C6H12/c1-2-4-6-5-3-1/h1-6H2 XDTMQSROBMDMFD-UHFFFAOYSA-N
W9P phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
W9P N1 S1 1
W9P C4 S1 1
W9P C5 S1 1
W9P C6 S1 1
W9P C8 S1 1
W9P C10 S1 1
W9P C13 S1 1
W9P C15 S1 1
W9P C17 S1 1
W9P C20 S1 1
W9P C1 S1 1
W9P C11 S1 1
W9P C12 S1 1
W9P C14 S1 1
W9P C16 S1 1
W9P C18 S1 1
W9P C19 S1 1
W9P C2 S1 1
W9P C3 S1 1
W9P C9 S1 1
W9P N2 S1 1
W9P N4 S1 1
W9P N5 S1 1
W9P N6 S1 1
W9P N7 S1 1
W9P C4 F1 1
W9P C3 F1 1
W9P C2 F1 1
W9P C1 F1 1
W9P C6 F1 1
W9P C5 F1 1
W9P C15 F2 1
W9P C16 F2 1
W9P C17 F2 1
W9P C18 F2 1
W9P C19 F2 1
W9P C14 F2 1
#
_pdbe_chem_comp_rdkit_properties.comp_id W9P
_pdbe_chem_comp_rdkit_properties.exactmw 481.228
_pdbe_chem_comp_rdkit_properties.amw 481.510
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 14
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 7
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 17
_pdbe_chem_comp_rdkit_properties.NumHBD 7
_pdbe_chem_comp_rdkit_properties.NumHBA 13
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 34
_pdbe_chem_comp_rdkit_properties.NumAtoms 65
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 14
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.650
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 5
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 239.038
_pdbe_chem_comp_rdkit_properties.tpsa 211.950
_pdbe_chem_comp_rdkit_properties.CrippenClogP -2.240
_pdbe_chem_comp_rdkit_properties.CrippenMR 116.921
_pdbe_chem_comp_rdkit_properties.chi0v 15.988
_pdbe_chem_comp_rdkit_properties.chi1v 8.275
_pdbe_chem_comp_rdkit_properties.chi2v 3.489
_pdbe_chem_comp_rdkit_properties.chi3v 3.489
_pdbe_chem_comp_rdkit_properties.chi4v 2.024
_pdbe_chem_comp_rdkit_properties.chi0n 46.988
_pdbe_chem_comp_rdkit_properties.chi1n 23.210
_pdbe_chem_comp_rdkit_properties.chi2n 3.489
_pdbe_chem_comp_rdkit_properties.chi3n 3.489
_pdbe_chem_comp_rdkit_properties.chi4n 2.024
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.750
_pdbe_chem_comp_rdkit_properties.kappa1 6.927
_pdbe_chem_comp_rdkit_properties.kappa2 11.592
_pdbe_chem_comp_rdkit_properties.kappa3 6.024
_pdbe_chem_comp_rdkit_properties.Phi 2.362
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
W9P UniChem ChEMBL CHEMBL5186609
W9P UniChem PDBe W9P
W9P UniChem PubChem 156600263
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
W9P N1 -2.771 0.600 -0.686 ETKDGv3 1
W9P N3 6.138 2.194 0.935 ETKDGv3 2
W9P C4 -4.832 -0.153 -1.894 ETKDGv3 3
W9P C5 -3.762 -0.492 -0.808 ETKDGv3 4
W9P C6 -4.406 -0.809 0.574 ETKDGv3 5
W9P C7 -6.221 -0.306 2.261 ETKDGv3 6
W9P C8 -1.830 0.613 -1.818 ETKDGv3 7
W9P C10 -0.186 2.223 -0.620 ETKDGv3 8
W9P C13 3.023 -0.003 -0.985 ETKDGv3 9
W9P C15 5.331 -1.456 0.301 ETKDGv3 10
W9P C17 7.509 -1.262 1.397 ETKDGv3 11
W9P C20 9.017 -3.285 1.965 ETKDGv3 12
W9P C1 -5.693 0.011 0.838 ETKDGv3 13
W9P C11 0.859 1.145 -0.285 ETKDGv3 14
W9P C12 1.890 0.943 -1.409 ETKDGv3 15
W9P C14 5.177 0.022 0.377 ETKDGv3 16
W9P C16 6.424 -2.057 0.780 ETKDGv3 17
W9P C18 7.385 0.074 1.455 ETKDGv3 18
W9P C19 6.184 0.758 0.912 ETKDGv3 19
W9P C2 -6.782 -0.352 -0.229 ETKDGv3 20
W9P C3 -6.195 -0.814 -1.594 ETKDGv3 21
W9P C9 -1.046 1.933 -1.866 ETKDGv3 22
W9P N2 3.949 0.644 -0.052 ETKDGv3 23
W9P N4 8.683 -1.906 1.921 ETKDGv3 24
W9P N5 9.771 -1.274 2.524 ETKDGv3 25
W9P N6 10.621 -2.153 2.869 ETKDGv3 26
W9P N7 10.170 -3.439 2.528 ETKDGv3 27
W9P O1 -7.632 0.753 -0.424 ETKDGv3 28
W9P O2 -6.056 -2.214 -1.595 ETKDGv3 29
W9P O3 -4.998 1.240 -2.006 ETKDGv3 30
W9P O4 -7.398 0.408 2.534 ETKDGv3 31
W9P O5 -5.397 1.389 0.753 ETKDGv3 32
W9P O6 6.672 2.819 1.874 ETKDGv3 33
W9P O7 5.737 2.892 -0.182 ETKDGv3 34
W9P H1 -2.195 0.433 0.172 ETKDGv3 35
W9P H3 -4.464 -0.550 -2.869 ETKDGv3 36
W9P H4 -3.237 -1.425 -1.121 ETKDGv3 37
W9P H5 -3.676 -0.650 1.397 ETKDGv3 38
W9P H6 -4.661 -1.892 0.611 ETKDGv3 39
W9P H7 -6.441 -1.392 2.351 ETKDGv3 40
W9P H8 -5.446 -0.070 3.027 ETKDGv3 41
W9P H9 -1.136 -0.254 -1.761 ETKDGv3 42
W9P H10 -2.377 0.529 -2.781 ETKDGv3 43
W9P H11 -0.850 2.365 0.260 ETKDGv3 44
W9P H12 0.338 3.191 -0.776 ETKDGv3 45
W9P H13 2.588 -0.913 -0.520 ETKDGv3 46
W9P H14 3.585 -0.307 -1.895 ETKDGv3 47
W9P H15 4.554 -2.070 -0.134 ETKDGv3 48
W9P H16 8.414 -4.100 1.590 ETKDGv3 49
W9P H17 0.358 0.182 -0.052 ETKDGv3 50
W9P H18 1.382 1.464 0.642 ETKDGv3 51
W9P H19 1.383 0.495 -2.289 ETKDGv3 52
W9P H20 2.319 1.921 -1.720 ETKDGv3 53
W9P H21 6.501 -3.133 0.713 ETKDGv3 54
W9P H22 8.175 0.673 1.891 ETKDGv3 55
W9P H23 -7.394 -1.200 0.165 ETKDGv3 56
W9P H24 -6.912 -0.533 -2.402 ETKDGv3 57
W9P H25 -1.772 2.767 -1.989 ETKDGv3 58
W9P H26 -0.403 1.940 -2.772 ETKDGv3 59
W9P H27 3.712 1.597 0.306 ETKDGv3 60
W9P H28 -8.481 0.405 -0.804 ETKDGv3 61
W9P H29 -5.950 -2.495 -2.541 ETKDGv3 62
W9P H30 -5.432 1.411 -2.882 ETKDGv3 63
W9P H31 -7.124 1.331 2.773 ETKDGv3 64
W9P H32 -4.693 1.594 1.424 ETKDGv3 65
#