data_WIO
#
_chem_comp.id WIO
_chem_comp.name
"(1R,2S)-2-[(N-{[2-(3-fluorophenoxy)-2-methylpropoxy]carbonyl}-L-leucyl)amino]-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C24 H36 F N3 O9 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2022-09-13
_chem_comp.pdbx_modified_date 2022-09-16
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 561.621
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code WIO
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag Y
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 8E69
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
WIO C07 C1 C 0 1 N N S N N N -13.650 -2.472 43.112 1.164 0.116 -0.983 C07 WIO 1
WIO C08 C2 C 0 1 N N N N N N -14.239 -3.552 44.057 1.439 1.428 -1.719 C08 WIO 2
WIO C09 C3 C 0 1 N N N N N N -14.490 -3.044 45.494 0.338 1.675 -2.751 C09 WIO 3
WIO C10 C4 C 0 1 N N N N N N -14.863 -4.182 46.457 0.544 3.045 -3.400 C10 WIO 4
WIO C11 C5 C 0 1 N N N N N N -13.273 -2.265 46.048 0.394 0.588 -3.827 C11 WIO 5
WIO C12 C6 C 0 1 N N N N N N -13.482 -2.957 41.600 2.310 -0.189 -0.054 C12 WIO 6
WIO C14 C7 C 0 1 N N S N N N -11.996 -3.686 39.590 4.684 -0.550 0.363 C14 WIO 7
WIO C15 C8 C 0 1 N N N N N N -11.110 -2.701 38.822 4.748 0.607 1.361 C15 WIO 8
WIO C16 C9 C 0 1 N N S N N N -11.573 -1.244 38.762 4.999 1.916 0.609 C16 WIO 9
WIO C19 C10 C 0 1 N N N N N N -12.562 0.259 37.134 6.839 3.376 0.124 C19 WIO 10
WIO C20 C11 C 0 1 N N N N N N -12.802 -1.038 37.897 6.401 1.904 -0.044 C20 WIO 11
WIO O21 O1 O 0 1 N N N N N N -9.315 -0.510 38.183 4.259 3.266 2.477 O21 WIO 12
WIO C22 C12 C 0 1 N N R N N N -11.279 -5.079 39.428 4.499 -1.867 1.120 C22 WIO 13
WIO O23 O2 O 0 1 N N N N N N -12.147 -5.985 38.878 5.630 -2.094 1.964 O23 WIO 14
WIO C05 C13 C 0 1 N N N N N N -13.864 -0.126 42.548 -1.263 0.011 -0.796 C05 WIO 15
WIO C03 C14 C 0 1 N N N N N N -14.078 2.159 41.791 -3.645 -0.136 -0.782 C03 WIO 16
WIO C02 C15 C 0 1 N N N N N N -14.976 3.429 42.098 -4.819 0.043 0.183 C02 WIO 17
WIO C01 C16 C 0 1 N N N N N N -14.122 4.670 41.807 -4.673 -0.935 1.351 C01 WIO 18
WIO C17 C17 C 0 1 N N N N N N -10.518 -0.448 38.021 5.046 3.080 1.574 C17 WIO 19
WIO C26 C18 C 0 1 N N N N N N -16.242 3.314 41.268 -4.826 1.477 0.717 C26 WIO 20
WIO C28 C19 C 0 1 Y N N N N N -14.367 3.443 44.440 -7.192 -0.094 0.213 C28 WIO 21
WIO C29 C20 C 0 1 Y N N N N N -14.003 2.222 45.057 -7.139 0.252 1.556 C29 WIO 22
WIO C30 C21 C 0 1 Y N N N N N -13.015 2.182 46.055 -8.306 0.381 2.284 C30 WIO 23
WIO C31 C22 C 0 1 Y N N N N N -12.351 3.344 46.481 -9.528 0.166 1.675 C31 WIO 24
WIO C32 C23 C 0 1 Y N N N N N -12.725 4.533 45.859 -9.586 -0.179 0.336 C32 WIO 25
WIO C34 C24 C 0 1 Y N N N N N -13.710 4.628 44.862 -8.419 -0.309 -0.396 C34 WIO 26
WIO F33 F1 F 0 1 N N N N N N -12.073 5.666 46.277 -10.782 -0.390 -0.257 F33 WIO 27
WIO N06 N1 N 0 1 N N N N N N -14.375 -1.273 43.120 -0.073 0.241 -0.207 N06 WIO 28
WIO N13 N2 N 0 1 N N N N N N -12.238 -3.240 41.011 3.554 -0.348 -0.548 N13 WIO 29
WIO N18 N3 N 0 1 N N N N N N -11.096 0.390 37.083 6.087 3.879 1.284 N18 WIO 30
WIO O04 O3 O 0 1 N N N N N N -14.583 0.982 42.374 -2.400 0.126 -0.083 O04 WIO 31
WIO O24 O4 O 0 1 N N N N N N -14.520 -3.084 40.956 2.114 -0.292 1.139 O24 WIO 32
WIO O25 O5 O 0 1 N N N N N N -12.713 -0.058 42.158 -1.311 -0.300 -1.969 O25 WIO 33
WIO O27 O6 O 0 1 N N N N N N -15.351 3.450 43.458 -6.045 -0.215 -0.504 O27 WIO 34
WIO S2 S1 S 0 1 N Y N N N N -10.203 -5.528 40.789 4.347 -3.231 -0.066 S2 WIO 35
WIO H1 H1 H 0 1 N N N N N N -12.634 -2.262 43.476 1.058 -0.692 -1.707 H1 WIO 36
WIO H2 H2 H 0 1 N N N N N N -15.196 -3.897 43.638 1.457 2.250 -1.003 H2 WIO 37
WIO H3 H3 H 0 1 N N N N N N -13.534 -4.395 44.104 2.403 1.366 -2.224 H3 WIO 38
WIO H4 H4 H 0 1 N N N N N N -15.340 -2.347 45.456 -0.634 1.649 -2.259 H4 WIO 39
WIO H5 H5 H 0 1 N N N N N N -15.031 -3.771 47.463 1.516 3.072 -3.893 H5 WIO 40
WIO H6 H6 H 0 1 N N N N N N -15.781 -4.675 46.104 -0.241 3.221 -4.136 H6 WIO 41
WIO H7 H7 H 0 1 N N N N N N -14.044 -4.915 46.493 0.504 3.820 -2.634 H7 WIO 42
WIO H8 H8 H 0 1 N N N N N N -13.491 -1.921 47.070 1.366 0.614 -4.319 H8 WIO 43
WIO H9 H9 H 0 1 N N N N N N -12.392 -2.924 46.063 0.247 -0.388 -3.365 H9 WIO 44
WIO H10 H10 H 0 1 N N N N N N -13.070 -1.396 45.405 -0.391 0.764 -4.562 H10 WIO 45
WIO H11 H11 H 0 1 N N N N N N -12.966 -3.748 39.075 5.610 -0.588 -0.210 H11 WIO 46
WIO H12 H12 H 0 1 N N N N N N -11.030 -3.066 37.787 3.803 0.674 1.901 H12 WIO 47
WIO H13 H13 H 0 1 N N N N N N -10.116 -2.713 39.293 5.559 0.433 2.068 H13 WIO 48
WIO H14 H14 H 0 1 N N N N N N -11.732 -0.843 39.774 4.229 2.076 -0.145 H14 WIO 49
WIO H15 H15 H 0 1 N N N N N N -13.010 1.111 37.665 7.911 3.431 0.313 H15 WIO 50
WIO H16 H16 H 0 1 N N N N N N -12.982 0.197 36.119 6.584 3.949 -0.768 H16 WIO 51
WIO H17 H17 H 0 1 N N N N N N -13.702 -0.952 38.524 7.074 1.234 0.491 H17 WIO 52
WIO H18 H18 H 0 1 N N N N N N -12.922 -1.878 37.196 6.338 1.633 -1.097 H18 WIO 53
WIO H19 H19 H 0 1 N N N N N N -14.028 2.018 40.701 -3.640 -1.158 -1.162 H19 WIO 54
WIO H20 H20 H 0 1 N N N N N N -13.067 2.340 42.184 -3.749 0.561 -1.614 H20 WIO 55
WIO H21 H21 H 0 1 N N N N N N -13.232 4.664 42.454 -3.844 -0.622 1.985 H21 WIO 56
WIO H22 H22 H 0 1 N N N N N N -13.808 4.660 40.753 -5.594 -0.943 1.935 H22 WIO 57
WIO H23 H23 H 0 1 N N N N N N -14.713 5.576 42.005 -4.478 -1.935 0.965 H23 WIO 58
WIO H24 H24 H 0 1 N N N N N N -16.887 4.184 41.460 -4.960 2.172 -0.112 H24 WIO 59
WIO H25 H25 H 0 1 N N N N N N -15.979 3.282 40.200 -5.644 1.597 1.427 H25 WIO 60
WIO H26 H26 H 0 1 N N N N N N -16.777 2.393 41.542 -3.879 1.684 1.216 H26 WIO 61
WIO H27 H27 H 0 1 N N N N N N -14.492 1.307 44.756 -6.184 0.419 2.033 H27 WIO 62
WIO H28 H28 H 0 1 N N N N N N -12.760 1.234 46.506 -8.263 0.649 3.329 H28 WIO 63
WIO H29 H29 H 0 1 N N N N N N -11.592 3.317 47.249 -10.440 0.267 2.246 H29 WIO 64
WIO H30 H30 H 0 1 N N N N N N -13.962 5.583 44.426 -8.463 -0.577 -1.442 H30 WIO 65
WIO H31 H31 H 0 1 N N N N N N -15.279 -1.248 43.548 -0.035 0.490 0.729 H31 WIO 66
WIO H32 H32 H 0 1 N N N N N N -11.431 -3.135 41.593 3.701 -0.329 -1.506 H32 WIO 67
WIO H33 H33 H 0 1 N N N N N N -10.594 0.994 36.464 6.315 4.683 1.777 H33 WIO 68
WIO O1 O7 O 0 1 N Y N N N N -9.907 -7.220 40.238 3.066 -2.928 -0.830 O1 WIO 69
WIO O2 O8 O 0 1 N Y N N N N ? ? ? 5.369 -3.151 -1.051 O2 WIO 70
WIO O3 O9 O 0 1 N Y N N N N ? ? ? 4.074 -4.451 0.609 O3 WIO 71
WIO H35 H35 H 0 1 N N N N N N -10.544 -4.881 38.633 3.597 -1.813 1.729 H35 WIO 72
WIO H36 H36 H 0 1 N N N N N N -11.711 -6.824 38.782 5.773 -1.402 2.625 H36 WIO 73
WIO H34 H34 H 0 1 N Y N N N N -9.330 -7.657 40.853 2.850 -3.581 -1.510 H34 WIO 74
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
WIO N18 C19 SING N N 1
WIO N18 C17 SING N N 2
WIO C19 C20 SING N N 3
WIO C20 C16 SING N N 4
WIO C17 O21 DOUB N N 5
WIO C17 C16 SING N N 6
WIO C16 C15 SING N N 7
WIO C15 C14 SING N N 8
WIO O23 C22 SING N N 9
WIO C22 C14 SING N N 10
WIO C22 S2 SING N N 11
WIO C14 N13 SING N N 12
WIO O24 C12 DOUB N N 13
WIO N13 C12 SING N N 14
WIO C26 C02 SING N N 15
WIO C12 C07 SING N N 16
WIO C03 C02 SING N N 17
WIO C03 O04 SING N N 18
WIO C01 C02 SING N N 19
WIO C02 O27 SING N N 20
WIO O25 C05 DOUB N N 21
WIO O04 C05 SING N N 22
WIO C05 N06 SING N N 23
WIO C07 N06 SING N N 24
WIO C07 C08 SING N N 25
WIO O27 C28 SING N N 26
WIO C08 C09 SING N N 27
WIO C28 C34 DOUB Y N 28
WIO C28 C29 SING Y N 29
WIO C34 C32 SING Y N 30
WIO C29 C30 DOUB Y N 31
WIO C09 C11 SING N N 32
WIO C09 C10 SING N N 33
WIO C32 F33 SING N N 34
WIO C32 C31 DOUB Y N 35
WIO C30 C31 SING Y N 36
WIO C07 H1 SING N N 37
WIO C08 H2 SING N N 38
WIO C08 H3 SING N N 39
WIO C09 H4 SING N N 40
WIO C10 H5 SING N N 41
WIO C10 H6 SING N N 42
WIO C10 H7 SING N N 43
WIO C11 H8 SING N N 44
WIO C11 H9 SING N N 45
WIO C11 H10 SING N N 46
WIO C14 H11 SING N N 47
WIO C15 H12 SING N N 48
WIO C15 H13 SING N N 49
WIO C16 H14 SING N N 50
WIO C19 H15 SING N N 51
WIO C19 H16 SING N N 52
WIO C20 H17 SING N N 53
WIO C20 H18 SING N N 54
WIO C03 H19 SING N N 55
WIO C03 H20 SING N N 56
WIO C01 H21 SING N N 57
WIO C01 H22 SING N N 58
WIO C01 H23 SING N N 59
WIO C26 H24 SING N N 60
WIO C26 H25 SING N N 61
WIO C26 H26 SING N N 62
WIO C29 H27 SING N N 63
WIO C30 H28 SING N N 64
WIO C31 H29 SING N N 65
WIO C34 H30 SING N N 66
WIO N06 H31 SING N N 67
WIO N13 H32 SING N N 68
WIO N18 H33 SING N N 69
WIO S2 O1 SING N N 70
WIO S2 O2 DOUB N N 71
WIO S2 O3 DOUB N N 72
WIO C22 H35 SING N N 73
WIO O23 H36 SING N N 74
WIO O1 H34 SING N N 75
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
WIO SMILES ACDLabs 12.01 CC(C)CC(NC(=O)OCC(C)(C)Oc1cccc(F)c1)C(=O)NC(CC1CCNC1=O)C(O)S(=O)(=O)O
WIO InChI InChI 1.06 InChI=1S/C24H36FN3O9S/c1-14(2)10-18(28-23(32)36-13-24(3,4)37-17-7-5-6-16(25)12-17)21(30)27-19(22(31)38(33,34)35)11-15-8-9-26-20(15)29/h5-7,12,14-15,18-19,22,31H,8-11,13H2,1-4H3,(H,26,29)(H,27,30)(H,28,32)(H,33,34,35)/t15-,18-,19-,22+/m0/s1
WIO InChIKey InChI 1.06 PKFJNVLUPJZVQH-SXTKRDDTSA-N
WIO SMILES_CANONICAL CACTVS 3.385 CC(C)C[C@H](NC(=O)OCC(C)(C)Oc1cccc(F)c1)C(=O)N[C@@H](C[C@@H]2CCNC2=O)[C@H](O)[S](O)(=O)=O
WIO SMILES CACTVS 3.385 CC(C)C[CH](NC(=O)OCC(C)(C)Oc1cccc(F)c1)C(=O)N[CH](C[CH]2CCNC2=O)[CH](O)[S](O)(=O)=O
WIO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 CC(C)C[C@@H](C(=O)N[C@@H](C[C@@H]1CCNC1=O)[C@H](O)S(=O)(=O)O)NC(=O)OCC(C)(C)Oc2cccc(c2)F
WIO SMILES "OpenEye OEToolkits" 2.0.7 CC(C)CC(C(=O)NC(CC1CCNC1=O)C(O)S(=O)(=O)O)NC(=O)OCC(C)(C)Oc2cccc(c2)F
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
WIO "SYSTEMATIC NAME" ACDLabs 12.01 "(1R,2S)-2-[(N-{[2-(3-fluorophenoxy)-2-methylpropoxy]carbonyl}-L-leucyl)amino]-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid"
WIO "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{R},2~{S})-2-[[(2~{S})-2-[[2-(3-fluoranylphenoxy)-2-methyl-propoxy]carbonylamino]-4-methyl-pentanoyl]amino]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propane-1-sulfonic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
WIO 'Create component' 2022-09-13 RCSB
WIO 'Initial release' 2022-09-21 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
WIO C07 C 10.794 0.720 1
WIO C08 C 12.093 -0.030 2
WIO C09 C 13.392 0.720 3
WIO C10 C 13.392 2.220 4
WIO C11 C 14.691 -0.030 5
WIO C12 C 10.794 2.220 6
WIO C14 C 9.495 4.470 7
WIO C15 C 10.794 5.220 8
WIO C16 C 10.794 6.720 9
WIO C19 C 10.044 9.028 10
WIO C20 C 9.581 7.601 11
WIO O21 O 13.434 7.138 12
WIO C22 C 8.196 5.220 13
WIO O23 O 8.196 6.720 14
WIO C05 C 9.495 -1.530 15
WIO C03 C 8.196 -3.780 16
WIO C02 C 6.897 -4.530 17
WIO C01 C 7.647 -5.829 18
WIO C17 C 12.008 7.601 19
WIO C26 C 6.147 -3.231 20
WIO C28 C 5.598 -6.780 21
WIO C29 C 6.897 -7.530 22
WIO C30 C 6.897 -9.030 23
WIO C31 C 5.598 -9.780 24
WIO C32 C 4.299 -9.030 25
WIO C34 C 4.299 -7.530 26
WIO F33 F 3.000 -9.780 27
WIO N06 N 9.495 -0.030 28
WIO N13 N 9.495 2.970 29
WIO N18 N 11.544 9.028 30
WIO O04 O 8.196 -2.280 31
WIO O24 O 12.093 2.970 32
WIO O25 O 10.794 -2.280 33
WIO O27 O 5.598 -5.280 34
WIO S2 S 6.897 4.470 35
WIO O1 O 5.598 3.720 36
WIO O2 O 6.147 5.769 37
WIO O3 O 7.647 3.171 38
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
WIO N18 C19 SINGLE NONE 1
WIO N18 C17 SINGLE NONE 2
WIO C19 C20 SINGLE NONE 3
WIO C20 C16 SINGLE NONE 4
WIO C17 O21 DOUBLE NONE 5
WIO C17 C16 SINGLE NONE 6
WIO C16 C15 SINGLE BEGINDASH 7
WIO C14 C15 SINGLE BEGINDASH 8
WIO C22 O23 SINGLE BEGINWEDGE 9
WIO C22 C14 SINGLE NONE 10
WIO C22 S2 SINGLE NONE 11
WIO C14 N13 SINGLE NONE 12
WIO O24 C12 DOUBLE NONE 13
WIO N13 C12 SINGLE NONE 14
WIO C26 C02 SINGLE NONE 15
WIO C12 C07 SINGLE NONE 16
WIO C03 C02 SINGLE NONE 17
WIO C03 O04 SINGLE NONE 18
WIO C01 C02 SINGLE NONE 19
WIO C02 O27 SINGLE NONE 20
WIO O25 C05 DOUBLE NONE 21
WIO O04 C05 SINGLE NONE 22
WIO C05 N06 SINGLE NONE 23
WIO C07 N06 SINGLE NONE 24
WIO C07 C08 SINGLE BEGINDASH 25
WIO O27 C28 SINGLE NONE 26
WIO C08 C09 SINGLE NONE 27
WIO C28 C34 SINGLE NONE 28
WIO C28 C29 DOUBLE NONE 29
WIO C34 C32 DOUBLE NONE 30
WIO C29 C30 SINGLE NONE 31
WIO C09 C11 SINGLE NONE 32
WIO C09 C10 SINGLE NONE 33
WIO C32 F33 SINGLE NONE 34
WIO C32 C31 SINGLE NONE 35
WIO C30 C31 DOUBLE NONE 36
WIO S2 O1 SINGLE NONE 37
WIO S2 O2 DOUBLE NONE 38
WIO S2 O3 DOUBLE NONE 39
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
WIO MurckoScaffold S1 scaffold 'O=C(CNC(=O)OCCOc1ccccc1)NCC[C@@H]1CCNC1=O' InChI=1S/C17H23N3O5/c21-15(18-8-6-13-7-9-19-16(13)22)12-20-17(23)25-11-10-24-14-4-2-1-3-5-14/h1-5,13H,6-12H2,(H,18,21)(H,19,22)(H,20,23)/t13-/m1/s1 XCDRDKPGMDOILN-CYBMUJFWSA-N
WIO amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
WIO peptide F2 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
WIO phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
WIO C07 S1 1
WIO C12 S1 1
WIO C14 S1 1
WIO C15 S1 1
WIO C16 S1 1
WIO C19 S1 1
WIO C20 S1 1
WIO O21 S1 1
WIO C05 S1 1
WIO C03 S1 1
WIO C02 S1 1
WIO C17 S1 1
WIO C28 S1 1
WIO C29 S1 1
WIO C30 S1 1
WIO C31 S1 1
WIO C32 S1 1
WIO C34 S1 1
WIO N06 S1 1
WIO N13 S1 1
WIO N18 S1 1
WIO O04 S1 1
WIO O24 S1 1
WIO O25 S1 1
WIO O27 S1 1
WIO N13 F1 1
WIO C12 F1 1
WIO O24 F1 1
WIO C07 F1 1
WIO N18 F1 2
WIO C17 F1 2
WIO O21 F1 2
WIO C16 F1 2
WIO O24 F2 1
WIO C12 F2 1
WIO C07 F2 1
WIO N06 F2 1
WIO C28 F3 1
WIO C34 F3 1
WIO C32 F3 1
WIO C31 F3 1
WIO C30 F3 1
WIO C29 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id WIO
_pdbe_chem_comp_rdkit_properties.exactmw 561.216
_pdbe_chem_comp_rdkit_properties.amw 561.629
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 12
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 5
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 19
_pdbe_chem_comp_rdkit_properties.NumHBD 5
_pdbe_chem_comp_rdkit_properties.NumHBA 9
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 38
_pdbe_chem_comp_rdkit_properties.NumAtoms 74
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 14
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 3
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.625
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 4
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 271.871
_pdbe_chem_comp_rdkit_properties.tpsa 180.360
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.879
_pdbe_chem_comp_rdkit_properties.CrippenMR 133.444
_pdbe_chem_comp_rdkit_properties.chi0v 18.619
_pdbe_chem_comp_rdkit_properties.chi1v 10.276
_pdbe_chem_comp_rdkit_properties.chi2v 3.835
_pdbe_chem_comp_rdkit_properties.chi3v 3.835
_pdbe_chem_comp_rdkit_properties.chi4v 2.185
_pdbe_chem_comp_rdkit_properties.chi0n 53.802
_pdbe_chem_comp_rdkit_properties.chi1n 26.526
_pdbe_chem_comp_rdkit_properties.chi2n 3.187
_pdbe_chem_comp_rdkit_properties.chi3n 3.187
_pdbe_chem_comp_rdkit_properties.chi4n 1.852
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.970
_pdbe_chem_comp_rdkit_properties.kappa1 7.819
_pdbe_chem_comp_rdkit_properties.kappa2 13.202
_pdbe_chem_comp_rdkit_properties.kappa3 10.063
_pdbe_chem_comp_rdkit_properties.Phi 2.716
#
_pdbe_chem_comp_external_mappings.comp_id WIO
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PDBe
_pdbe_chem_comp_external_mappings.resource_id WIO
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
WIO C07 -0.720 0.810 2.471 ETKDGv3 1
WIO C08 -1.130 2.090 3.238 ETKDGv3 2
WIO C09 -2.179 2.969 2.498 ETKDGv3 3
WIO C10 -1.508 4.087 1.685 ETKDGv3 4
WIO C11 -3.169 3.585 3.496 ETKDGv3 5
WIO C12 -1.867 -0.165 2.291 ETKDGv3 6
WIO C14 -2.860 -2.184 1.094 ETKDGv3 7
WIO C15 -4.141 -1.554 0.474 ETKDGv3 8
WIO C16 -4.021 -1.050 -0.983 ETKDGv3 9
WIO C19 -3.864 1.155 -2.094 ETKDGv3 10
WIO C20 -3.127 0.198 -1.141 ETKDGv3 11
WIO O21 -6.392 -1.235 -1.476 ETKDGv3 12
WIO C22 -2.299 -3.436 0.363 ETKDGv3 13
WIO O23 -1.787 -3.110 -0.904 ETKDGv3 14
WIO C05 1.267 1.444 1.015 ETKDGv3 15
WIO C03 3.127 1.984 -0.561 ETKDGv3 16
WIO C02 3.767 0.713 -1.164 ETKDGv3 17
WIO C01 3.752 -0.435 -0.136 ETKDGv3 18
WIO C17 -5.325 -0.567 -1.504 ETKDGv3 19
WIO C26 2.994 0.292 -2.430 ETKDGv3 20
WIO C28 6.032 0.161 -2.087 ETKDGv3 21
WIO C29 6.169 0.111 -3.420 ETKDGv3 22
WIO C30 7.142 -0.819 -4.032 ETKDGv3 23
WIO C31 7.899 -1.603 -3.254 ETKDGv3 24
WIO C32 7.767 -1.536 -1.784 ETKDGv3 25
WIO C34 6.884 -0.695 -1.229 ETKDGv3 26
WIO F33 8.544 -2.322 -0.999 ETKDGv3 27
WIO N06 -0.126 1.160 1.177 ETKDGv3 28
WIO N13 -1.805 -1.177 1.272 ETKDGv3 29
WIO N18 -5.238 0.699 -2.120 ETKDGv3 30
WIO O04 1.744 1.794 -0.253 ETKDGv3 31
WIO O24 -2.840 -0.143 3.094 ETKDGv3 32
WIO O25 2.051 1.377 2.001 ETKDGv3 33
WIO O27 5.120 1.050 -1.506 ETKDGv3 34
WIO S2 -3.509 -4.748 0.188 ETKDGv3 35
WIO H1 0.037 0.277 3.086 ETKDGv3 36
WIO H2 -1.518 1.776 4.233 ETKDGv3 37
WIO H3 -0.217 2.687 3.456 ETKDGv3 38
WIO H4 -2.772 2.346 1.794 ETKDGv3 39
WIO H5 -0.812 3.669 0.931 ETKDGv3 40
WIO H6 -0.939 4.770 2.352 ETKDGv3 41
WIO H7 -2.276 4.679 1.142 ETKDGv3 42
WIO H8 -3.918 4.208 2.963 ETKDGv3 43
WIO H9 -2.635 4.218 4.237 ETKDGv3 44
WIO H10 -3.716 2.782 4.036 ETKDGv3 45
WIO H11 -3.150 -2.540 2.107 ETKDGv3 46
WIO H12 -4.959 -2.303 0.528 ETKDGv3 47
WIO H13 -4.477 -0.713 1.118 ETKDGv3 48
WIO H14 -3.684 -1.856 -1.665 ETKDGv3 49
WIO H15 -3.434 1.089 -3.117 ETKDGv3 50
WIO H16 -3.814 2.204 -1.731 ETKDGv3 51
WIO H17 -3.006 0.719 -0.168 ETKDGv3 52
WIO H18 -2.125 -0.073 -1.538 ETKDGv3 53
WIO H19 3.693 2.319 0.335 ETKDGv3 54
WIO H20 3.201 2.806 -1.305 ETKDGv3 55
WIO H21 4.305 -0.140 0.781 ETKDGv3 56
WIO H22 2.713 -0.711 0.140 ETKDGv3 57
WIO H23 4.229 -1.345 -0.558 ETKDGv3 58
WIO H24 1.929 0.080 -2.193 ETKDGv3 59
WIO H25 3.035 1.099 -3.192 ETKDGv3 60
WIO H26 3.433 -0.628 -2.870 ETKDGv3 61
WIO H27 5.566 0.747 -4.056 ETKDGv3 62
WIO H28 7.240 -0.864 -5.109 ETKDGv3 63
WIO H29 8.612 -2.284 -3.701 ETKDGv3 64
WIO H30 6.792 -0.639 -0.152 ETKDGv3 65
WIO H31 -0.747 1.293 0.348 ETKDGv3 66
WIO H32 -0.934 -1.244 0.700 ETKDGv3 67
WIO H33 -6.011 1.160 -2.648 ETKDGv3 68
WIO O1 -2.713 -6.187 -0.163 ETKDGv3 69
WIO O2 -4.471 -4.434 -0.923 ETKDGv3 70
WIO O3 -4.270 -4.917 1.473 ETKDGv3 71
WIO H35 -1.488 -3.857 1.006 ETKDGv3 72
WIO H36 -0.798 -3.076 -0.831 ETKDGv3 73
WIO H34 -2.251 -6.020 -1.024 ETKDGv3 74
#